Carg06584 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg06584
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Stress associated endoplasmic reticulum protein
Location	Cucurbita_argyrosperma_scaffold_051 : 1464385 .. 1465925 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAAAAAAAAAAAAATCCTGATTTGTTCGTTCATATAGACATAAATCTGAAGAACTCGTCTCCATTTTTCTGCTCCAGCTCAATTCCGCCTCCCAGATCTCCCACTCAGTAATGGTACTTTCTTTGTGTTTTTTTCTCTCTGAATCATTCTTCTTCCTTGATCTTGATTCTTTCCCCTCTAGGGTTCTCTATTTTGAGATTTGATCTATAGATTTCTTTTCTTTAATGAATTTGGCTCTGTTCCTTGTTGGTGTTTTGTTTGCGGATCTGACGTAATTGGCATTGTTGATTTATGATTTGATTTGATCGGTTTTGTAGACGACATCGCGGCGTCTTGCGGATCGGAAGGTGGAGAGGTTCGAGAAGAACATTTTGAAGAGAGGGGCCGTGCCCGAGACTACTACAAAGAAGGGAAAGGACTATCCTGTTGGTCCTCTTCTTCTTGGATTCTTCGTCTTTGTCGTCATTGGATCATGTGAGTATTTTCTCGGTCCGCGTTCCAGATTCTGAATGATAGTTTCATCTGCTTATGCTTATGTTTTGACCTATTCTGGATTTCTATTATATGGCTCAAGATTCTGTGCGGTTGTTTATCAATCATCATATATTTACCTTAATCTATCTAAAAAGAACATGATATCTAGAGGTCCTCTCTTCAAATTCTCATGAAGACCCAAAATGAAAGGTTGAGAATACATGTAATTATGTATATGCCATAGTTTTAATGTAACTGTATATTTGTTTATAATGGTGTGTAGAAAGAATCATGGTAGCTAGTAATCCGTCCATCTTGAGCTTAGAATGAGTCCAAAATTATCCAGGATTCAATTCTATTCGTACTTTTGTTGTTCAAAGATGGCCCCAGAACACAATTTTCATTTAAGATCATGAATGATTATGTTGAGGCCTTCTTAGCTAGTAATCCGTCCATCTTGAGCTTAGAATGAGACCAAAATTGTCCAGGATTCAATTCTATTCATACTTTTGTGGTTCAAAGAGGGCCCCAGAACACAATTTTCATTGAAGATCATGAATGATTATATTGTTGAGGCCTTCTTGCAGTAGAAGTAGTTTTTGGTTGTGTGTCTGTGGGCTGATGTTTTGTTCCATTGTTGAATCTTGCAGCACTGTTTCAGATAATCCGGACGGCAACAGGTGGAGGAATGGCATGATGAGAGGCATCTTCAGTTCTGAGTGGGGTAGCAGAAGAGGCAGGACATGAGGTTAGGCTAGAACTTGTTGAGTTATTTGTTCTGTGTCTGTGCTACCCTGTAGGAGAAGTTTGGTAGTGTAGAGGGTAAAGAAGAGCATGGCCATTTATGGTCATCTTGTGAAGTACTTATTAAAGAAAGTAAGCTAAATAAAATAACAGTGCGTTCACACACAAGTGCTATGCTATCATCCTATACATCTAATTCGTCCATTGTTGTTCTTCCTTCATGTCTTGATGATGATGATGATGATATCCAACTCTAAGGTGCACTTGTTTCTACATGTGGGTTTGGTAAAAAGGATGCTTTTTTCAGTGGAAGTTTCTTCT

mRNA sequence

AAAAAAAAAAAAAAAATCCTGATTTGTTCGTTCATATAGACATAAATCTGAAGAACTCGTCTCCATTTTTCTGCTCCAGCTCAATTCCGCCTCCCAGATCTCCCACTCAGTAATGACGACATCGCGGCGTCTTGCGGATCGGAAGGTGGAGAGGTTCGAGAAGAACATTTTGAAGAGAGGGGCCGTGCCCGAGACTACTACAAAGAAGGGAAAGGACTATCCTGTTGGTCCTCTTCTTCTTGGATTCTTCGTCTTTGTCGTCATTGGATCATCACTGTTTCAGATAATCCGGACGGCAACAGGTGGAGGAATGGCATGATGAGAGGCATCTTCAGTTCTGAGTGGGGTAGCAGAAGAGGCAGGACATGAGGTTAGGCTAGAACTTGTTGAGTTATTTGTTCTGTGTCTGTGCTACCCTGTAGGAGAAGTTTGGTAGTGTAGAGGGTAAAGAAGAGCATGGCCATTTATGGTCATCTTGTGAAGTACTTATTAAAGAAAGTAAGCTAAATAAAATAACAGTGCGTTCACACACAAGTGCTATGCTATCATCCTATACATCTAATTCGTCCATTGTTGTTCTTCCTTCATGTCTTGATGATGATGATGATGATATCCAACTCTAAGGTGCACTTGTTTCTACATGTGGGTTTGGTAAAAAGGATGCTTTTTTCAGTGGAAGTTTCTTCT

Coding sequence (CDS)

ATGACGACATCGCGGCGTCTTGCGGATCGGAAGGTGGAGAGGTTCGAGAAGAACATTTTGAAGAGAGGGGCCGTGCCCGAGACTACTACAAAGAAGGGAAAGGACTATCCTGTTGGTCCTCTTCTTCTTGGATTCTTCGTCTTTGTCGTCATTGGATCATCACTGTTTCAGATAATCCGGACGGCAACAGGTGGAGGAATGGCATGA

Protein sequence

MTTSRRLADRKVERFEKNILKRGAVPETTTKKGKDYPVGPLLLGFFVFVVIGSSLFQIIRTATGGGMA

Homology

[Close]

BLAST of Carg06584 vs. NCBI nr
Match: XP_022956326.1 (stress-associated endoplasmic reticulum protein 2-like [Cucurbita moschata] >XP_022979456.1 stress-associated endoplasmic reticulum protein 2-like [Cucurbita maxima] >XP_023526291.1 stress-associated endoplasmic reticulum protein 2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 134.8 bits (338), Expect = 1.1e-28
Identity = 68/68 (100.00%), Postives = 68/68 (100.00%), Query Frame = 0


Query: 1  MTTSRRLADRKVERFEKNILKRGAVPETTTKKGKDYPVGPLLLGFFVFVVIGSSLFQIIR 60
          MTTSRRLADRKVERFEKNILKRGAVPETTTKKGKDYPVGPLLLGFFVFVVIGSSLFQIIR
Sbjct: 1  MTTSRRLADRKVERFEKNILKRGAVPETTTKKGKDYPVGPLLLGFFVFVVIGSSLFQIIR 60

Query: 61 TATGGGMA 69
          TATGGGMA
Sbjct: 61 TATGGGMA 68

[Close]

BLAST of Carg06584 vs. NCBI nr
Match: XP_022932563.1 (stress-associated endoplasmic reticulum protein 2-like isoform X2 [Cucurbita moschata] >XP_022972333.1 stress-associated endoplasmic reticulum protein 2-like [Cucurbita maxima] >XP_023538872.1 stress-associated endoplasmic reticulum protein 2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 131.3 bits (329), Expect = 1.2e-27
Identity = 66/68 (97.06%), Postives = 66/68 (97.06%), Query Frame = 0


Query: 1  MTTSRRLADRKVERFEKNILKRGAVPETTTKKGKDYPVGPLLLGFFVFVVIGSSLFQIIR 60
          MTTSRR ADRKVERFEKNILKRGAVPET TKKGKDYPVGPLLLGFFVFVVIGSSLFQIIR
Sbjct: 1  MTTSRRFADRKVERFEKNILKRGAVPETATKKGKDYPVGPLLLGFFVFVVIGSSLFQIIR 60

Query: 61 TATGGGMA 69
          TATGGGMA
Sbjct: 61 TATGGGMA 68

[Close]

BLAST of Carg06584 vs. NCBI nr
Match: XP_018836780.1 (PREDICTED: stress-associated endoplasmic reticulum protein 2-like [Juglans regia])

HSP 1 Score: 131.0 bits (328), Expect = 1.6e-27
Identity = 65/68 (95.59%), Postives = 67/68 (98.53%), Query Frame = 0


Query: 1  MTTSRRLADRKVERFEKNILKRGAVPETTTKKGKDYPVGPLLLGFFVFVVIGSSLFQIIR 60
          MTTSRRLADRKVERFEKNILKRGAVPETTTKKGKDYPVGP+LLGFF+FVVIGSSLFQIIR
Sbjct: 1  MTTSRRLADRKVERFEKNILKRGAVPETTTKKGKDYPVGPVLLGFFIFVVIGSSLFQIIR 60

Query: 61 TATGGGMA 69
          TAT GGMA
Sbjct: 61 TATSGGMA 68

[Close]

BLAST of Carg06584 vs. NCBI nr
Match: XP_004152134.1 (PREDICTED: stress-associated endoplasmic reticulum protein 2-like [Cucumis sativus] >KGN53016.1 Stress associated endoplasmic reticulum protein [Cucumis sativus])

HSP 1 Score: 130.6 bits (327), Expect = 2.1e-27
Identity = 65/67 (97.01%), Postives = 66/67 (98.51%), Query Frame = 0


Query: 1  MTTSRRLADRKVERFEKNILKRGAVPETTTKKGKDYPVGPLLLGFFVFVVIGSSLFQIIR 60
          MTTSRRLADRKVERFEKNILKRGAVPET TKKGKDYPVGP+LLGFFVFVVIGSSLFQIIR
Sbjct: 1  MTTSRRLADRKVERFEKNILKRGAVPETATKKGKDYPVGPILLGFFVFVVIGSSLFQIIR 60

Query: 61 TATGGGM 68
          TATGGGM
Sbjct: 61 TATGGGM 67

[Close]

BLAST of Carg06584 vs. NCBI nr
Match: XP_021285535.1 (stress-associated endoplasmic reticulum protein 2-like [Herrania umbratica])

HSP 1 Score: 130.2 bits (326), Expect = 2.7e-27
Identity = 65/68 (95.59%), Postives = 66/68 (97.06%), Query Frame = 0


Query: 1  MTTSRRLADRKVERFEKNILKRGAVPETTTKKGKDYPVGPLLLGFFVFVVIGSSLFQIIR 60
          MTTSRRLADRKVERFEKNI KRGAVPETTTKKGKDYPVGPLLLGFF+FVVIGSSLFQIIR
Sbjct: 1  MTTSRRLADRKVERFEKNITKRGAVPETTTKKGKDYPVGPLLLGFFIFVVIGSSLFQIIR 60

Query: 61 TATGGGMA 69
          TAT GGMA
Sbjct: 61 TATSGGMA 68

[Close]

BLAST of Carg06584 vs. TAIR10
Match: AT1G27350.1 (Ribosome associated membrane protein RAMP4)

HSP 1 Score: 125.6 bits (314), Expect = 1.2e-29
Identity = 61/68 (89.71%), Postives = 66/68 (97.06%), Query Frame = 0


Query: 1  MTTSRRLADRKVERFEKNILKRGAVPETTTKKGKDYPVGPLLLGFFVFVVIGSSLFQIIR 60
          MTTS+RLADRK+E+F+KNILKRG VPETTTKKGKDYPVGP+LLGFFVFVVIGSSLFQIIR
Sbjct: 1  MTTSKRLADRKIEKFDKNILKRGFVPETTTKKGKDYPVGPILLGFFVFVVIGSSLFQIIR 60

Query: 61 TATGGGMA 69
          TAT GGMA
Sbjct: 61 TATSGGMA 68

[Close]

BLAST of Carg06584 vs. TAIR10
Match: AT1G27330.1 (Ribosome associated membrane protein RAMP4)

HSP 1 Score: 125.6 bits (314), Expect = 1.2e-29
Identity = 61/68 (89.71%), Postives = 66/68 (97.06%), Query Frame = 0


Query: 1  MTTSRRLADRKVERFEKNILKRGAVPETTTKKGKDYPVGPLLLGFFVFVVIGSSLFQIIR 60
          MTTS+RLADRK+E+F+KNILKRG VPETTTKKGKDYPVGP+LLGFFVFVVIGSSLFQIIR
Sbjct: 1  MTTSKRLADRKIEKFDKNILKRGFVPETTTKKGKDYPVGPILLGFFVFVVIGSSLFQIIR 60

Query: 61 TATGGGMA 69
          TAT GGMA
Sbjct: 61 TATSGGMA 68

[Close]

BLAST of Carg06584 vs. Swiss-Prot
Match: sp|Q3T073|SERP2_BOVIN (Stress-associated endoplasmic reticulum protein 2 OS=Bos taurus OX=9913 GN=SERP2 PE=3 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 4.7e-07
Identity = 27/53 (50.94%), Postives = 36/53 (67.92%), Query Frame = 0


Query: 13 ERFEKNILKRGAVPETTTKKGKDYPVGPLLLGFFVFVVIGSSLFQIIRTATGG 66
          E+  KNI +RG V +T   + + YPVGP LL  FVFVV GS++FQII++   G
Sbjct: 12 EKHSKNITQRGNVAKTLRPQEEKYPVGPWLLALFVFVVCGSAIFQIIQSIRMG 64

[Close]

BLAST of Carg06584 vs. Swiss-Prot
Match: sp|Q8N6R1|SERP2_HUMAN (Stress-associated endoplasmic reticulum protein 2 OS=Homo sapiens OX=9606 GN=SERP2 PE=1 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 4.7e-07
Identity = 27/53 (50.94%), Postives = 36/53 (67.92%), Query Frame = 0


Query: 13 ERFEKNILKRGAVPETTTKKGKDYPVGPLLLGFFVFVVIGSSLFQIIRTATGG 66
          E+  KNI +RG V +T   + + YPVGP LL  FVFVV GS++FQII++   G
Sbjct: 12 EKHSKNITQRGNVAKTLRPQEEKYPVGPWLLALFVFVVCGSAIFQIIQSIRMG 64

[Close]

BLAST of Carg06584 vs. Swiss-Prot
Match: sp|Q6TAW2|SERP2_MOUSE (Stress-associated endoplasmic reticulum protein 2 OS=Mus musculus OX=10090 GN=Serp2 PE=3 SV=2)

HSP 1 Score: 54.7 bits (130), Expect = 4.7e-07
Identity = 27/53 (50.94%), Postives = 36/53 (67.92%), Query Frame = 0


Query: 13 ERFEKNILKRGAVPETTTKKGKDYPVGPLLLGFFVFVVIGSSLFQIIRTATGG 66
          E+  KNI +RG V +T   + + YPVGP LL  FVFVV GS++FQII++   G
Sbjct: 12 EKHSKNITQRGNVAKTLRPQEEKYPVGPWLLALFVFVVCGSAIFQIIQSIRMG 64

[Close]

BLAST of Carg06584 vs. Swiss-Prot
Match: sp|Q5REZ1|SERP1_PONAB (Stress-associated endoplasmic reticulum protein 1 OS=Pongo abelii OX=9601 GN=SERP1 PE=3 SV=1)

HSP 1 Score: 46.6 bits (109), Expect = 1.3e-04
Identity = 25/54 (46.30%), Postives = 35/54 (64.81%), Query Frame = 0


Query: 13 ERFEKNILKRGAVPETT-TKKGKDYPVGPLLLGFFVFVVIGSSLFQIIRTATGG 66
          E+  KNI +RG V +T+    G+   VGP LL  F+FVV GS++FQII++   G
Sbjct: 12 EKHSKNITQRGNVAKTSRNAPGEKASVGPWLLALFIFVVCGSAIFQIIQSIRMG 65

[Close]

BLAST of Carg06584 vs. Swiss-Prot
Match: sp|Q3ZBR1|SERP1_BOVIN (Stress-associated endoplasmic reticulum protein 1 OS=Bos taurus OX=9913 GN=SERP1 PE=3 SV=1)

HSP 1 Score: 44.7 bits (104), Expect = 4.9e-04
Identity = 24/54 (44.44%), Postives = 35/54 (64.81%), Query Frame = 0


Query: 13 ERFEKNILKRGAVPETTTKKGKD-YPVGPLLLGFFVFVVIGSSLFQIIRTATGG 66
          E+  KNI +RG V +T+    ++   VGP LL  F+FVV GS++FQII++   G
Sbjct: 12 EKHSKNITQRGNVAKTSRNAPEEKASVGPWLLALFIFVVCGSAIFQIIQSIRMG 65

[Close]

BLAST of Carg06584 vs. TrEMBL
Match: tr|A0A2I4FYQ4|A0A2I4FYQ4_9ROSI (stress-associated endoplasmic reticulum protein 2-like OS=Juglans regia OX=51240 GN=LOC109003195 PE=4 SV=1)

HSP 1 Score: 131.0 bits (328), Expect = 1.0e-27
Identity = 65/68 (95.59%), Postives = 67/68 (98.53%), Query Frame = 0


Query: 1  MTTSRRLADRKVERFEKNILKRGAVPETTTKKGKDYPVGPLLLGFFVFVVIGSSLFQIIR 60
          MTTSRRLADRKVERFEKNILKRGAVPETTTKKGKDYPVGP+LLGFF+FVVIGSSLFQIIR
Sbjct: 1  MTTSRRLADRKVERFEKNILKRGAVPETTTKKGKDYPVGPVLLGFFIFVVIGSSLFQIIR 60

Query: 61 TATGGGMA 69
          TAT GGMA
Sbjct: 61 TATSGGMA 68

[Close]

BLAST of Carg06584 vs. TrEMBL
Match: tr|A0A0A0KYW0|A0A0A0KYW0_CUCSA (Stress associated endoplasmic reticulum protein OS=Cucumis sativus OX=3659 GN=Csa_4G011630 PE=4 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 1.4e-27
Identity = 65/67 (97.01%), Postives = 66/67 (98.51%), Query Frame = 0


Query: 1  MTTSRRLADRKVERFEKNILKRGAVPETTTKKGKDYPVGPLLLGFFVFVVIGSSLFQIIR 60
          MTTSRRLADRKVERFEKNILKRGAVPET TKKGKDYPVGP+LLGFFVFVVIGSSLFQIIR
Sbjct: 1  MTTSRRLADRKVERFEKNILKRGAVPETATKKGKDYPVGPILLGFFVFVVIGSSLFQIIR 60

Query: 61 TATGGGM 68
          TATGGGM
Sbjct: 61 TATGGGM 67

[Close]

BLAST of Carg06584 vs. TrEMBL
Match: tr|A0A2N9HFG7|A0A2N9HFG7_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS38303 PE=4 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 5.2e-27
Identity = 64/68 (94.12%), Postives = 66/68 (97.06%), Query Frame = 0


Query: 1  MTTSRRLADRKVERFEKNILKRGAVPETTTKKGKDYPVGPLLLGFFVFVVIGSSLFQIIR 60
          MTTSRRLADRKVERFEKNI+KRGAVPETT KKGKDYPVGP+LLGFFVFVVIGSSLFQIIR
Sbjct: 1  MTTSRRLADRKVERFEKNIMKRGAVPETTAKKGKDYPVGPVLLGFFVFVVIGSSLFQIIR 60

Query: 61 TATGGGMA 69
          TAT GGMA
Sbjct: 61 TATSGGMA 68

[Close]

BLAST of Carg06584 vs. TrEMBL
Match: tr|B9RMD3|B9RMD3_RICCO (Stress associated endoplasmic reticulum protein, putative OS=Ricinus communis OX=3988 GN=RCOM_1079850 PE=4 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 5.2e-27
Identity = 64/68 (94.12%), Postives = 65/68 (95.59%), Query Frame = 0


Query: 1  MTTSRRLADRKVERFEKNILKRGAVPETTTKKGKDYPVGPLLLGFFVFVVIGSSLFQIIR 60
          MTTSRRLADRKVERFEKNI KRG VPETTTKKGKDYPVGPLLLGFF+FVVIGSSLFQIIR
Sbjct: 1  MTTSRRLADRKVERFEKNITKRGTVPETTTKKGKDYPVGPLLLGFFIFVVIGSSLFQIIR 60

Query: 61 TATGGGMA 69
          TAT GGMA
Sbjct: 61 TATSGGMA 68

[Close]

BLAST of Carg06584 vs. TrEMBL
Match: tr|A0A2C9UMJ1|A0A2C9UMJ1_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_13G010600 PE=4 SV=1)

HSP 1 Score: 128.3 bits (321), Expect = 6.8e-27
Identity = 64/68 (94.12%), Postives = 66/68 (97.06%), Query Frame = 0


Query: 1  MTTSRRLADRKVERFEKNILKRGAVPETTTKKGKDYPVGPLLLGFFVFVVIGSSLFQIIR 60
          MTTSRRLADRKVE+FEKNI KRGAVPETTTKKGKDYPVGP+LLGFFVFVVIGSSLFQIIR
Sbjct: 1  MTTSRRLADRKVEKFEKNITKRGAVPETTTKKGKDYPVGPVLLGFFVFVVIGSSLFQIIR 60

Query: 61 TATGGGMA 69
          TAT GGMA
Sbjct: 61 TATSGGMA 68

The following BLAST results are available for this feature:

BLAST of Carg06584 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022956326.1	1.1e-28	100.00	stress-associated endoplasmic reticulum protein 2-like [Cucurbita moschata] >XP_...	[more]
XP_022932563.1	1.2e-27	97.06	stress-associated endoplasmic reticulum protein 2-like isoform X2 [Cucurbita mos...	[more]
XP_018836780.1	1.6e-27	95.59	PREDICTED: stress-associated endoplasmic reticulum protein 2-like [Juglans regia...	[more]
XP_004152134.1	2.1e-27	97.01	PREDICTED: stress-associated endoplasmic reticulum protein 2-like [Cucumis sativ...	[more]
XP_021285535.1	2.7e-27	95.59	stress-associated endoplasmic reticulum protein 2-like [Herrania umbratica]	[more]

BLAST of Carg06584 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G27350.1	1.2e-29	89.71	Ribosome associated membrane protein RAMP4	[more]
AT1G27330.1	1.2e-29	89.71	Ribosome associated membrane protein RAMP4	[more]

BLAST of Carg06584 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q3T073\|SERP2_BOVIN	4.7e-07	50.94	Stress-associated endoplasmic reticulum protein 2 OS=Bos taurus OX=9913 GN=SERP2...	[more]
sp\|Q8N6R1\|SERP2_HUMAN	4.7e-07	50.94	Stress-associated endoplasmic reticulum protein 2 OS=Homo sapiens OX=9606 GN=SER...	[more]
sp\|Q6TAW2\|SERP2_MOUSE	4.7e-07	50.94	Stress-associated endoplasmic reticulum protein 2 OS=Mus musculus OX=10090 GN=Se...	[more]
sp\|Q5REZ1\|SERP1_PONAB	1.3e-04	46.30	Stress-associated endoplasmic reticulum protein 1 OS=Pongo abelii OX=9601 GN=SER...	[more]
sp\|Q3ZBR1\|SERP1_BOVIN	4.9e-04	44.44	Stress-associated endoplasmic reticulum protein 1 OS=Bos taurus OX=9913 GN=SERP1...	[more]

BLAST of Carg06584 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A2I4FYQ4\|A0A2I4FYQ4_9ROSI	1.0e-27	95.59	stress-associated endoplasmic reticulum protein 2-like OS=Juglans regia OX=51240...	[more]
tr\|A0A0A0KYW0\|A0A0A0KYW0_CUCSA	1.4e-27	97.01	Stress associated endoplasmic reticulum protein OS=Cucumis sativus OX=3659 GN=Cs...	[more]
tr\|A0A2N9HFG7\|A0A2N9HFG7_FAGSY	5.2e-27	94.12	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS38303 PE=4 SV=1	[more]
tr\|B9RMD3\|B9RMD3_RICCO	5.2e-27	94.12	Stress associated endoplasmic reticulum protein, putative OS=Ricinus communis OX...	[more]
tr\|A0A2C9UMJ1\|A0A2C9UMJ1_MANES	6.8e-27	94.12	Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_13G010600 PE=4 SV=...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Cellular Component**
Term	Definition
GO:0005783	endoplasmic reticulum

Vocabulary: **INTERPRO**
Term	Definition
IPR010580	ER_stress-assoc

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005783	endoplasmic reticulum
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg06584-RA	Carg06584-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010580	Stress-associated endoplasmic reticulum protein	PFAM	PF06624	RAMP4	coord: 5..62 e-value: 1.5E-25 score: 88.9
IPR010580	Stress-associated endoplasmic reticulum protein	PANTHER	PTHR15601	STRESS ASSOCIATED ENDOPLASMIC RETICULUM PROTEIN SERP1/RAMP4	coord: 1..67
None	No IPR available	PANTHER	PTHR15601:SF5	SUBFAMILY NOT NAMED	coord: 1..67

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg06584	Csa4G011630	Cucumber (Chinese Long) v2	carcuB0128
Carg06584	ClCG07G015170	Watermelon (Charleston Gray)	carwcgB0120
Carg06584	CSPI04G02810	Wild cucumber (PI 183967)	carcpiB0133
Carg06584	Cucsa.095320	Cucumber (Gy14) v1	carcgyB0141
Carg06584	CmaCh14G014330	Cucurbita maxima (Rimu)	carcmaB0154
Carg06584	CmaCh06G016910	Cucurbita maxima (Rimu)	carcmaB0158
Carg06584	CmoCh06G016820	Cucurbita moschata (Rifu)	carcmoB0167
Carg06584	CmoCh14G014680	Cucurbita moschata (Rifu)	carcmoB0163
Carg06584	Lsi07G003430	Bottle gourd (USVL1VR-Ls)	carlsiB109
Carg06584	Cp4.1LG08g06200	Cucurbita pepo (Zucchini)	carcpeB0178
Carg06584	CsGy4G002670	Cucumber (Gy14) v2	carcgybB0127
Carg06584	MELO3C032849.2	Melon (DHL92) v3.6.1	carmedB0131
Carg06584	CsaV3_4G002750	Cucumber (Chinese Long) v3	carcucB0137
Carg06584	Cla97C07G142150	Watermelon (97103) v2	carwmbB0125
Carg06584	Bhi01G002862	Wax gourd	carwgoB0140

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg06584	Carg15443	Silver-seed gourd	carcarB142

The following block(s) are covering this gene:


Gene	Organism	Block
Carg06584	Cucurbita pepo (Zucchini)	carcpeB0176
Carg06584	Melon (DHL92) v3.5.1	carmeB0127
Carg06584	Watermelon (97103) v1	carwmB0121