Carg06507 (gene) Silver-seed gourd

Overview
NameCarg06507
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
Descriptionmethyl-CpG-binding domain-containing protein 11-like
LocationCucurbita_argyrosperma_scaffold_051 : 928109 .. 929851 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ACGAGAGATTCAGAGGGAGCGATGATGGTGGAAAATGAAGCTCAAACTCAAGCTGCAGCAGCCATGGATGAAGAAGCCATTTCTGTGGAGCTTCCTGCCCCAGCTACCTGGAAGAAACTGGTCTCTCTTTCTTTCTCTAAAAGTTTGGACTTTTTACTCAATTTAGGTCTTTTTTTTTTTGCAAGAATTAAACTCTTTTTCGTTTAAGATTGATGTTCTTGTTTCTGGGTCTTGTGAATTTCTTCTCAATATTCTCTTTTCGTGGTCAAGTTTGTGTTTTTTTGGCTTTGGAACTCTGTTTTAGTTCTAGGGCTTGTTTGGAGAACTGTTGGGGTTTAATTCTTTTGAGCACTTCTTGAATTGTTGGTTATTTTGCTTGTCTAGTTCATACCCAACAAGGCAGGTACACCTAGGAAGAGTGAAATTGTATTCATTGCTCCAACTGGTGAAGAATTTAGTAGCAGAAAACTGCTAGAGCAGTACTTAAAATTGCATTCTGATGCTCCTGCGATATCCGAGTTCGATTGGAGCACAGGTGAGGCACCTAGAAGATCTGCAAGAATTAGTGAGAAGGTCAAGGCGACTCCGCTGAAAGAGGAGCCTCCGAAGAAACGGAGTCGAAAATCTTCTGGTTCTAAGAAAGACTATAAGGAGGAAGCCATTGCAGCTCCCATAGTTCTTGAAGAAATTGAAATGATTGATGTAGAGGGGAATGAGAAGGATAAAGACGGTTCTGATACTCGTCGAGCTGATAATGGAGATAACCCGAAAGACGAACCGAAGGAAAGTGAAAAAGGAGATGCTGATCCAGACATAAGGAGTAAAGATGAGAGGGGTTGTGATGCTGGTGAAGGTGAAAAGCAAGATCAAAATGAAAGTTCAGATGTGGTTGTTAACTCTGAATTTGTCGGTATCGACGAAACGAATGAAAACGGTGGCGAAACGAACGGTCAAGATGCGATTCAAGTGGAAACTGAGGGATTGGAAGAAGCTGAAAAGCAAGGAAATGAAGTAGCAGAAATAGTCATACCTACTGAATACTCTGTTGCTGTTGCTAGTGAGGTTAACCATTGTGAAAACGAAAACGAAAACGAAAACGAAAACGATCCTGGCGATGTCGTCGTTCAACAAGCGAACGGAGTCATGGAGGGAGTTAAACAGAATGATCAGAACGAAGCTGCAGCCACACCAGACAATGTGACTAAGGGTAATGAAGATGTTTCAACAAATGGTGCAAAATGTAACGTTGAGGCCGAGGACCGAAGCGTTGAACACGATAACTTGATGAAAGAAAATGGTAAGCTTTAACTAGGACGATCGATGGATCGATGCAGTGCATATCACAACTGTCTGCTGACTTTTTGGCGGTCTCGACGACTTGATCTTTGTTTCTGCAAGCGTTTACGCTCTCCCACGGTGACGGTAGCATTAGTTTTCGTATGTATTTACCGAAAAGAGAACTTGTTGTCGTTAGATTTAGATATTAGAATCTGTAGCTTTTGTTCTTTTTTCTCACCAGACTTCTTTTGACCGTAGAATGTTAATGTTCATCGGCCTTCTAATTTAACATTAGGTAAGTGATGTCTTTTTAAGTTCTTTATTTGTCCGTTTTGGCCTATTACGTATCGCTGGCCTCACAGTTTTAAAACAAGTCAGTTAGGGAGAGATTTCCACACCTTTATAAAGAATGTTTTATTCCCCTCTCCGACCGACGTGGGATCTCATAGTTCACCCTCTTTTGGG

mRNA sequence

ACGAGAGATTCAGAGGGAGCGATGATGGTGGAAAATGAAGCTCAAACTCAAGCTGCAGCAGCCATGGATGAAGAAGCCATTTCTGTGGAGCTTCCTGCCCCAGCTACCTGGAAGAAACTGTTCATACCCAACAAGGCAGGTACACCTAGGAAGAGTGAAATTGTATTCATTGCTCCAACTGGTGAAGAATTTAGTAGCAGAAAACTGCTAGAGCAGTACTTAAAATTGCATTCTGATGCTCCTGCGATATCCGAGTTCGATTGGAGCACAGGTGAGGCACCTAGAAGATCTGCAAGAATTAGTGAGAAGGTCAAGGCGACTCCGCTGAAAGAGGAGCCTCCGAAGAAACGGAGTCGAAAATCTTCTGGTTCTAAGAAAGACTATAAGGAGGAAGCCATTGCAGCTCCCATAGTTCTTGAAGAAATTGAAATGATTGATGTAGAGGGGAATGAGAAGGATAAAGACGGTTCTGATACTCGTCGAGCTGATAATGGAGATAACCCGAAAGACGAACCGAAGGAAAGTGAAAAAGGAGATGCTGATCCAGACATAAGGAGTAAAGATGAGAGGGGTTGTGATGCTGGTGAAGGTGAAAAGCAAGATCAAAATGAAAGTTCAGATGTGGTTGTTAACTCTGAATTTGTCGGTATCGACGAAACGAATGAAAACGGTGGCGAAACGAACGGTCAAGATGCGATTCAAGTGGAAACTGAGGGATTGGAAGAAGCTGAAAAGCAAGGAAATGAAGTAGCAGAAATAGTCATACCTACTGAATACTCTGTTGCTGTTGCTAGTGAGGTTAACCATTGTGAAAACGAAAACGAAAACGAAAACGAAAACGATCCTGGCGATGTCGTCGTTCAACAAGCGAACGGAGTCATGGAGGGAGTTAAACAGAATGATCAGAACGAAGCTGCAGCCACACCAGACAATGTGACTAAGGGTAATGAAGATGTTTCAACAAATGGTGCAAAATGTAACGTTGAGGCCGAGGACCGAAGCGTTGAACACGATAACTTGATGAAAGAAAATGGTAAGCTTTAACTAGGACGATCGATGGATCGATGCAGTGCATATCACAACTGTCTGCTGACTTTTTGGCGGTCTCGACGACTTGATCTTTGTTTCTGCAAGCGTTTACGCTCTCCCACGGTGACGGTAGCATTAGTTTTCGTATGTATTTACCGAAAAGAGAACTTGTTGTCGTTAGATTTAGATATTAGAATCTGTAGCTTTTGTTCTTTTTTCTCACCAGACTTCTTTTGACCGTAGAATGTTAATGTTCATCGGCCTTCTAATTTAACATTAGGTAAGTGATGTCTTTTTAAGTTCTTTATTTGTCCGTTTTGGCCTATTACGTATCGCTGGCCTCACAGTTTTAAAACAAGTCAGTTAGGGAGAGATTTCCACACCTTTATAAAGAATGTTTTATTCCCCTCTCCGACCGACGTGGGATCTCATAGTTCACCCTCTTTTGGG

Coding sequence (CDS)

ACGAGAGATTCAGAGGGAGCGATGATGGTGGAAAATGAAGCTCAAACTCAAGCTGCAGCAGCCATGGATGAAGAAGCCATTTCTGTGGAGCTTCCTGCCCCAGCTACCTGGAAGAAACTGTTCATACCCAACAAGGCAGGTACACCTAGGAAGAGTGAAATTGTATTCATTGCTCCAACTGGTGAAGAATTTAGTAGCAGAAAACTGCTAGAGCAGTACTTAAAATTGCATTCTGATGCTCCTGCGATATCCGAGTTCGATTGGAGCACAGGTGAGGCACCTAGAAGATCTGCAAGAATTAGTGAGAAGGTCAAGGCGACTCCGCTGAAAGAGGAGCCTCCGAAGAAACGGAGTCGAAAATCTTCTGGTTCTAAGAAAGACTATAAGGAGGAAGCCATTGCAGCTCCCATAGTTCTTGAAGAAATTGAAATGATTGATGTAGAGGGGAATGAGAAGGATAAAGACGGTTCTGATACTCGTCGAGCTGATAATGGAGATAACCCGAAAGACGAACCGAAGGAAAGTGAAAAAGGAGATGCTGATCCAGACATAAGGAGTAAAGATGAGAGGGGTTGTGATGCTGGTGAAGGTGAAAAGCAAGATCAAAATGAAAGTTCAGATGTGGTTGTTAACTCTGAATTTGTCGGTATCGACGAAACGAATGAAAACGGTGGCGAAACGAACGGTCAAGATGCGATTCAAGTGGAAACTGAGGGATTGGAAGAAGCTGAAAAGCAAGGAAATGAAGTAGCAGAAATAGTCATACCTACTGAATACTCTGTTGCTGTTGCTAGTGAGGTTAACCATTGTGAAAACGAAAACGAAAACGAAAACGAAAACGATCCTGGCGATGTCGTCGTTCAACAAGCGAACGGAGTCATGGAGGGAGTTAAACAGAATGATCAGAACGAAGCTGCAGCCACACCAGACAATGTGACTAAGGGTAATGAAGATGTTTCAACAAATGGTGCAAAATGTAACGTTGAGGCCGAGGACCGAAGCGTTGAACACGATAACTTGATGAAAGAAAATGGTAAGCTTTAA

Protein sequence

TRDSEGAMMVENEAQTQAAAAMDEEAISVELPAPATWKKLFIPNKAGTPRKSEIVFIAPTGEEFSSRKLLEQYLKLHSDAPAISEFDWSTGEAPRRSARISEKVKATPLKEEPPKKRSRKSSGSKKDYKEEAIAAPIVLEEIEMIDVEGNEKDKDGSDTRRADNGDNPKDEPKESEKGDADPDIRSKDERGCDAGEGEKQDQNESSDVVVNSEFVGIDETNENGGETNGQDAIQVETEGLEEAEKQGNEVAEIVIPTEYSVAVASEVNHCENENENENENDPGDVVVQQANGVMEGVKQNDQNEAAATPDNVTKGNEDVSTNGAKCNVEAEDRSVEHDNLMKENGKL
Homology
[Close]
BLAST of Carg06507 vs. NCBI nr
Match: XP_022955628.1 (methyl-CpG-binding domain-containing protein 11-like [Cucurbita moschata] >XP_022955629.1 methyl-CpG-binding domain-containing protein 11-like [Cucurbita moschata])

HSP 1 Score: 450.3 bits (1157), Expect = 6.0e-123
Identity = 309/340 (90.88%), Postives = 310/340 (91.18%), Query Frame = 0 

Query: 8   MMVENEAQTQAAAAMDEEAISVELPAPATWKKLFIPNKAGTPRKSEIVFIAPTGEEFSSR 67
           MMVENEAQTQAAAAMDEEAISVELPAPATWKKLFIPNKAGTPRKSEIVFIAPTGEEFSSR
Sbjct: 1   MMVENEAQTQAAAAMDEEAISVELPAPATWKKLFIPNKAGTPRKSEIVFIAPTGEEFSSR 60

Query: 68  KLLEQYLKLHSDAPAISEFDWSTGEAPRRSARISEKVKATPLKEEPPKKRSRKSSGSKKD 127
           KLLEQYLKLHSDAPAISEFDWSTGEAPRRSARISEKVKATP                   
Sbjct: 61  KLLEQYLKLHSDAPAISEFDWSTGEAPRRSARISEKVKATPXXXXXXXXXXXXXXXXXXX 120

Query: 128 YKEEAIAAPIVLEEIEMIDVEGNEKDKDGSDTRRADNGDNPKDEPKESEKGDADPDIRXX 187
            KEEAIAAP+VLEEIEMIDVEGNEKDKDGSDTRRADNGDNPKDEPKESEKGDADPDIRXX
Sbjct: 121 XKEEAIAAPLVLEEIEMIDVEGNEKDKDGSDTRRADNGDNPKDEPKESEKGDADPDIRXX 180

Query: 188 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDAIQVETEGLEEAEKQG 247
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDAIQVETEGLEEAE QG
Sbjct: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDAIQVETEGLEEAENQG 240

Query: 248 NEVAEIVIPTEYSVAVASEVNHCEXXXXXXXXXXPGDVVVQQANGVMEGVKQNDQNEAAA 307
           NEVAEIVIPT Y VAVASEVN C   XXXXXXXX GDV VQQANGVMEGVKQNDQNE AA
Sbjct: 241 NEVAEIVIPTAYFVAVASEVNQCINEXXXXXXXXXGDVAVQQANGVMEGVKQNDQNETAA 300

Query: 308 TPDNVTKGNEDVSTNGAKCNVEAEDRSVEHDNLMKENGKL 348
           TPDNVTKGNEDVSTNGAKCNVEAEDRSVEHDNLMKENGKL
Sbjct: 301 TPDNVTKGNEDVSTNGAKCNVEAEDRSVEHDNLMKENGKL 340

[Close]
BLAST of Carg06507 vs. NCBI nr
Match: XP_023526858.1 (methyl-CpG-binding domain-containing protein 11-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 422.5 bits (1085), Expect = 1.3e-114
Identity = 291/340 (85.59%), Postives = 295/340 (86.76%), Query Frame = 0 

Query: 8   MMVENEAQTQAAAAMDEEAISVELPAPATWKKLFIPNKAGTPRKSEIVFIAPTGEEFSSR 67
           MMVENEAQTQAAAAMDEEAISVELPAPATWKKLFIPNKAGTPRKSEIVFIAPTGEEFSSR
Sbjct: 1   MMVENEAQTQAAAAMDEEAISVELPAPATWKKLFIPNKAGTPRKSEIVFIAPTGEEFSSR 60

Query: 68  KLLEQYLKLHSDAPAISEFDWSTGEAPRRSARISEKVKATPLKEEPPKKRSRKSSGSKKD 127
           KLL+QYLKLHSDAPAISEFDWSTGEAPRRSARISEKVKAT                    
Sbjct: 61  KLLDQYLKLHSDAPAISEFDWSTGEAPRRSARISEKVKATXXXXXXXXXXXXXXXXXXXX 120

Query: 128 YKEEAIAAPIVLEEIEMIDVEGNEKDKDGSDTRRADNGDNPKDEPKESEKGDADPDIRXX 187
               AIA+PIVLEEIEMIDVEGNEKDKDGSDTRRADNGDNPKDEPKESEK +AD    XX
Sbjct: 121 XXXXAIASPIVLEEIEMIDVEGNEKDKDGSDTRRADNGDNPKDEPKESEKRNADXXXXXX 180

Query: 188 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDAIQVETEGLEEAEKQG 247
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  IQVETEGLEEAEKQG
Sbjct: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIQVETEGLEEAEKQG 240

Query: 248 NEVAEIVIPTEYSVAVASEVNHCEXXXXXXXXXXPGDVVVQQANGVMEGVKQNDQNEAAA 307
           NEVAEIVIPTEYSVAVASEVN C           PG+VVVQQANGVMEGVKQNDQNE AA
Sbjct: 241 NEVAEIVIPTEYSVAVASEVNQC--INENENENDPGNVVVQQANGVMEGVKQNDQNETAA 300

Query: 308 TPDNVTKGNEDVSTNGAKCNVEAEDRSVEHDNLMKENGKL 348
           TPDNVTKGNEDVSTN AKCNVEAEDRSVEHDNLMKENGKL
Sbjct: 301 TPDNVTKGNEDVSTNAAKCNVEAEDRSVEHDNLMKENGKL 338

[Close]
BLAST of Carg06507 vs. NCBI nr
Match: XP_022979415.1 (methyl-CpG-binding domain-containing protein 11-like [Cucurbita maxima])

HSP 1 Score: 386.7 bits (992), Expect = 8.1e-104
Identity = 253/340 (74.41%), Postives = 258/340 (75.88%), Query Frame = 0 

Query: 8   MMVENEAQTQAAAAMDEEAISVELPAPATWKKLFIPNKAGTPRKSEIVFIAPTGEEFSSR 67
           MMVENEAQTQAAAAMD E ISVELPAPATWKKLFIPNKAGTPRKS++VFIAPTGEEFSSR
Sbjct: 1   MMVENEAQTQAAAAMD-ETISVELPAPATWKKLFIPNKAGTPRKSQVVFIAPTGEEFSSR 60

Query: 68  KLLEQYLKLHSDAPAISEFDWSTGEAPRRSARISEKVKATPLKEEPPKKRSRKSSGSKKD 127
           KLLEQYLKLHSDAPAISEFDWSTGEAPRRS RISEKVKATP                   
Sbjct: 61  KLLEQYLKLHSDAPAISEFDWSTGEAPRRSVRISEKVKATPXXXXXXXXXXXXXXXXXXX 120

Query: 128 YKEEAIAAPIVLEEIEMIDVEGNEKDKDGSDTRRADNGDNPKDEPKESEKGDADPDIRXX 187
           YKEEAIA+PIVLEEIEMIDVEGNEKDKDGSDTRRA+NGDNPK                XX
Sbjct: 121 YKEEAIASPIVLEEIEMIDVEGNEKDKDGSDTRRAENGDNPKXXXXXXXXXXXXXXXXXX 180

Query: 188 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDAIQVETEGLEEAEKQG 247
           XXXXXXXXXXXXXXXXXXX                        DAIQVETEGLEEAEKQG
Sbjct: 181 XXXXXXXXXXXXXXXXXXXDVVVNSEFVGIDETNENGGETNGQDAIQVETEGLEEAEKQG 240

Query: 248 NEVAEIVIPTEYSVAVASEVNHCEXXXXXXXXXXPGDVVVQQANGVMEGVKQNDQNEAAA 307
           NEVAEIV PTEYSVAVASEVN C           PG+VV      VMEGVKQNDQNE AA
Sbjct: 241 NEVAEIVTPTEYSVAVASEVNQC--INENKNENDPGNVV-----RVMEGVKQNDQNETAA 300

Query: 308 TPDNVTKGNEDVSTNGAKCNVEAEDRSVEHDNLMKENGKL 348
           TPDNVTKGNEDVSTNGAKCNVEAEDRSVEHDNLMKENGKL
Sbjct: 301 TPDNVTKGNEDVSTNGAKCNVEAEDRSVEHDNLMKENGKL 332

[Close]
BLAST of Carg06507 vs. NCBI nr
Match: XP_008454229.1 (PREDICTED: methyl-CpG-binding domain-containing protein 11-like [Cucumis melo])

HSP 1 Score: 283.1 bits (723), Expect = 1.3e-72
Identity = 200/383 (52.22%), Postives = 222/383 (57.96%), Query Frame = 0 

Query: 5   EGAMMVE-NEAQTQAAAAMDEEAISVELPAPATWKKLFIPNKAGTPRKSEIVFIAPTGEE 64
           E  MMVE  EAQ    AAMD E ISVELPAP TWKKLFIP ++GTPRK+EIVFIAPTGEE
Sbjct: 5   EEVMMVEIEEAQADTGAAMD-EVISVELPAPPTWKKLFIPRRSGTPRKTEIVFIAPTGEE 64

Query: 65  FSSRKLLEQYLKLHSDAPAISEFDWSTGEAPRRSARISEKVKATPLKEEPPKKRSRKSSG 124
             +RKLLEQYLK H   PAISEFDWSTGE PRRSARISEKVKATP               
Sbjct: 65  IGNRKLLEQYLKSHPGGPAISEFDWSTGETPRRSARISEKVKATPXXXXXXXXXXXXXXX 124

Query: 125 SKKDYKEEAIAAPIVLEEIEMIDVEGNEK------DKDGSDTRRADNGDNPKDEPKESEK 184
                KEE  A     EE+EM D E NEK      DKDGSD  +A++GDNP+ EPKE EK
Sbjct: 125 XXXXXKEEVNAGVTGPEEVEMKDAEANEKNIPVVEDKDGSDNYQAEDGDNPRGEPKEIEK 184

Query: 185 GDADPDIR--------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 244
            DADPDI                                                     
Sbjct: 185 VDADPDISGKDKTGNDAGESKNGHTEAPEATENVPQVKEGEKQDHEGGSDVVVNSEFVSM 244

Query: 245 XXXXXXXXXXXXXDAIQVETEGLEEAEKQGNEVAEIVIPTEYSVAVASEVNH-------- 304
                        DAIQ +TEGLEEAEKQGNE+AE     E+  A+ASEVN         
Sbjct: 245 GETNKHGSETNGQDAIQEKTEGLEEAEKQGNEIAE-----EHITAIASEVNQSXXXXXXX 304

Query: 305 -----CEXXXXXXXXXXPGDVVVQQANGVMEGVKQNDQNEAAATPDNVTKGNEDVSTNGA 348
                  XXXXXXXXXX  +V ++Q NGV+EG KQND+NEA A PDN  KGN+DVSTN A
Sbjct: 305 XXXXXXXXXXXXXXXXXXXNVGIEQVNGVVEGKKQNDENEATAVPDNEVKGNQDVSTNAA 364

[Close]
BLAST of Carg06507 vs. NCBI nr
Match: XP_022153629.1 (methyl-CpG-binding domain-containing protein 10-like isoform X1 [Momordica charantia])

HSP 1 Score: 267.3 bits (682), Expect = 7.2e-68
Identity = 192/406 (47.29%), Postives = 214/406 (52.71%), Query Frame = 0 

Query: 8   MMVENEAQTQAAAAMDEEAISVELPAPATWKKLFIPNKAGTPRKSEIVFIAPTGEEFSSR 67
           M++ENEAQT++     +E ISVELPAP TWKKLFIP KAGTPRKSEIVFIAPTGEEFS+R
Sbjct: 8   MVLENEAQTESGGGAMDELISVELPAPPTWKKLFIPKKAGTPRKSEIVFIAPTGEEFSNR 67

Query: 68  KLLEQYLKLHSDAPAISEFDWSTGEAPRRSARISEKVKATPLKEEPPKKRSRKSSGSKKD 127
           KLLEQYLK H  +PA+SEFDWSTGE PRRSARISEKVKATP                   
Sbjct: 68  KLLEQYLKSHPGSPAVSEFDWSTGETPRRSARISEKVKATPXXXXXXXXXXXXXXXXXXX 127

Query: 128 YKEEAIAAPIVLEEIEMIDVEGN------EKDKDGSDTRRADNGDNPKDEPKESEKGDAD 187
               A AAP V EEIEM D EGN      E+DKD  + R+A+NGDN KDE K  EK DAD
Sbjct: 128 XXXXADAAPKVPEEIEMKDAEGNEEIPVVEEDKDVYNDRQAENGDNLKDEQKGIEKVDAD 187

Query: 188 PDI---------------------RXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 247
           P+I                                                         
Sbjct: 188 PEISSKDKMGSDAGETENGQTEAKAATEENVPEVKEGEKQDLKESSDLDVNLGTVGNDET 247

Query: 248 XXXXXXXXXXDAIQVETEGLEEAEKQGNEVAEIVIPTEYSVAVASEVNHC---------- 307
                     D IQ +TEGLEE EKQGNEVAEIV PTE +  VASEVN            
Sbjct: 248 YKNGGKTNGQDTIQEKTEGLEEVEKQGNEVAEIVTPTEET--VASEVNQIEKAVAQTEIE 307

Query: 308 ---------EXXXXXXXXXXPGDVVVQQANGVMEGVKQNDQNE-AAATPDNVTKGNEDVS 348
                    E          PG VV+QQANGV+E  KQ+DQNE  AA PD   +GN+DVS
Sbjct: 308 QVNDSPDKKENYSLDKKENDPGTVVIQQANGVVEEEKQSDQNETVAAAPDAEAEGNQDVS 367

[Close]
BLAST of Carg06507 vs. TAIR10
Match: AT3G15790.1 (methyl-CPG-binding domain 11)

HSP 1 Score: 137.1 bits (344), Expect = 2.0e-32
Identity = 85/154 (55.19%), Postives = 106/154 (68.83%), Query Frame = 0 

Query: 23  DEEAISVELPAPATWKKLFIPNKAGTPRKSEIVFIAPTGEEFSSRKLLEQYLKLHSDAPA 82
           +EE +SVELPAP++WKKLF PNK G+ +K+E+VF+APTGEE S+RK LEQYLK H   PA
Sbjct: 4   EEEVVSVELPAPSSWKKLFYPNKVGSVKKTEVVFVAPTGEEISNRKQLEQYLKSHPGNPA 63

Query: 83  ISEFDWSTGEAPRRSARISEKVKATPLKE-EPPKKRSR-KSSGSKKDYKEEAIAA----P 142
           I+EFDW+T   PRRSARISEK KATP  + EPPKKR R KS  SKKD + E         
Sbjct: 64  IAEFDWTTSGTPRRSARISEKTKATPSPDKEPPKKRGRTKSPVSKKDAEGEKSEGGGEEN 123

Query: 143 IVLEEIEMIDVEG-----NEKDKDGS-DTRRADN 165
             +++ EM   EG     N  DK+GS +T R ++
Sbjct: 124 SHVKDTEMNPPEGIAENENVTDKNGSGETERVND 157

[Close]
BLAST of Carg06507 vs. TAIR10
Match: AT1G15340.1 (methyl-CPG-binding domain 10)

HSP 1 Score: 135.6 bits (340), Expect = 5.9e-32
Identity = 67/100 (67.00%), Postives = 82/100 (82.00%), Query Frame = 0 

Query: 24  EEAISVELPAPATWKKLFIPNKAGTPRKSEIVFIAPTGEEFSSRKLLEQYLKLHSDAPAI 83
           +E +S+ELPAPA+WKKLF P +AGTPRK+EIVF+APTGEE SSRK LEQYLK H   P I
Sbjct: 5   DELVSIELPAPASWKKLFYPKRAGTPRKTEIVFVAPTGEEISSRKQLEQYLKAHPGNPVI 64

Query: 84  SEFDWSTGEAPRRSARISEKVKA-TPLKEEPPKKRSRKSS 123
           SEF+W+TGE PRRS+RIS+KVKA TP  ++ P  + R+SS
Sbjct: 65  SEFEWTTGETPRRSSRISQKVKATTPTPDKEPLLKKRRSS 104

[Close]
BLAST of Carg06507 vs. Swiss-Prot
Match: sp|Q9LW00|MBD11_ARATH (Methyl-CpG-binding domain-containing protein 11 OS=Arabidopsis thaliana OX=3702 GN=MBD11 PE=1 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 3.7e-31
Identity = 85/154 (55.19%), Postives = 106/154 (68.83%), Query Frame = 0 

Query: 23  DEEAISVELPAPATWKKLFIPNKAGTPRKSEIVFIAPTGEEFSSRKLLEQYLKLHSDAPA 82
           +EE +SVELPAP++WKKLF PNK G+ +K+E+VF+APTGEE S+RK LEQYLK H   PA
Sbjct: 4   EEEVVSVELPAPSSWKKLFYPNKVGSVKKTEVVFVAPTGEEISNRKQLEQYLKSHPGNPA 63

Query: 83  ISEFDWSTGEAPRRSARISEKVKATPLKE-EPPKKRSR-KSSGSKKDYKEEAIAA----P 142
           I+EFDW+T   PRRSARISEK KATP  + EPPKKR R KS  SKKD + E         
Sbjct: 64  IAEFDWTTSGTPRRSARISEKTKATPSPDKEPPKKRGRTKSPVSKKDAEGEKSEGGGEEN 123

Query: 143 IVLEEIEMIDVEG-----NEKDKDGS-DTRRADN 165
             +++ EM   EG     N  DK+GS +T R ++
Sbjct: 124 SHVKDTEMNPPEGIAENENVTDKNGSGETERVND 157

[Close]
BLAST of Carg06507 vs. Swiss-Prot
Match: sp|Q9XI36|MBD10_ARATH (Methyl-CpG-binding domain-containing protein 10 OS=Arabidopsis thaliana OX=3702 GN=MBD10 PE=1 SV=1)

HSP 1 Score: 135.6 bits (340), Expect = 1.1e-30
Identity = 67/100 (67.00%), Postives = 82/100 (82.00%), Query Frame = 0 

Query: 24  EEAISVELPAPATWKKLFIPNKAGTPRKSEIVFIAPTGEEFSSRKLLEQYLKLHSDAPAI 83
           +E +S+ELPAPA+WKKLF P +AGTPRK+EIVF+APTGEE SSRK LEQYLK H   P I
Sbjct: 5   DELVSIELPAPASWKKLFYPKRAGTPRKTEIVFVAPTGEEISSRKQLEQYLKAHPGNPVI 64

Query: 84  SEFDWSTGEAPRRSARISEKVKA-TPLKEEPPKKRSRKSS 123
           SEF+W+TGE PRRS+RIS+KVKA TP  ++ P  + R+SS
Sbjct: 65  SEFEWTTGETPRRSSRISQKVKATTPTPDKEPLLKKRRSS 104

[Close]
BLAST of Carg06507 vs. TrEMBL
Match: tr|A0A1S3BY89|A0A1S3BY89_CUCME (methyl-CpG-binding domain-containing protein 11-like OS=Cucumis melo OX=3656 GN=LOC103494699 PE=4 SV=1)

HSP 1 Score: 283.1 bits (723), Expect = 8.4e-73
Identity = 200/383 (52.22%), Postives = 222/383 (57.96%), Query Frame = 0 

Query: 5   EGAMMVE-NEAQTQAAAAMDEEAISVELPAPATWKKLFIPNKAGTPRKSEIVFIAPTGEE 64
           E  MMVE  EAQ    AAMD E ISVELPAP TWKKLFIP ++GTPRK+EIVFIAPTGEE
Sbjct: 5   EEVMMVEIEEAQADTGAAMD-EVISVELPAPPTWKKLFIPRRSGTPRKTEIVFIAPTGEE 64

Query: 65  FSSRKLLEQYLKLHSDAPAISEFDWSTGEAPRRSARISEKVKATPLKEEPPKKRSRKSSG 124
             +RKLLEQYLK H   PAISEFDWSTGE PRRSARISEKVKATP               
Sbjct: 65  IGNRKLLEQYLKSHPGGPAISEFDWSTGETPRRSARISEKVKATPXXXXXXXXXXXXXXX 124

Query: 125 SKKDYKEEAIAAPIVLEEIEMIDVEGNEK------DKDGSDTRRADNGDNPKDEPKESEK 184
                KEE  A     EE+EM D E NEK      DKDGSD  +A++GDNP+ EPKE EK
Sbjct: 125 XXXXXKEEVNAGVTGPEEVEMKDAEANEKNIPVVEDKDGSDNYQAEDGDNPRGEPKEIEK 184

Query: 185 GDADPDIR--------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 244
            DADPDI                                                     
Sbjct: 185 VDADPDISGKDKTGNDAGESKNGHTEAPEATENVPQVKEGEKQDHEGGSDVVVNSEFVSM 244

Query: 245 XXXXXXXXXXXXXDAIQVETEGLEEAEKQGNEVAEIVIPTEYSVAVASEVNH-------- 304
                        DAIQ +TEGLEEAEKQGNE+AE     E+  A+ASEVN         
Sbjct: 245 GETNKHGSETNGQDAIQEKTEGLEEAEKQGNEIAE-----EHITAIASEVNQSXXXXXXX 304

Query: 305 -----CEXXXXXXXXXXPGDVVVQQANGVMEGVKQNDQNEAAATPDNVTKGNEDVSTNGA 348
                  XXXXXXXXXX  +V ++Q NGV+EG KQND+NEA A PDN  KGN+DVSTN A
Sbjct: 305 XXXXXXXXXXXXXXXXXXXNVGIEQVNGVVEGKKQNDENEATAVPDNEVKGNQDVSTNAA 364

[Close]
BLAST of Carg06507 vs. TrEMBL
Match: tr|A0A0A0KVG4|A0A0A0KVG4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G005520 PE=4 SV=1)

HSP 1 Score: 251.5 bits (641), Expect = 2.7e-63
Identity = 186/377 (49.34%), Postives = 208/377 (55.17%), Query Frame = 0 

Query: 5   EGAMMVE-NEAQTQAAAAMDEEAISVELPAPATWKKLFIPNKAGTPRKSEIVFIAPTGEE 64
           EG MMVE  EAQ    A MD E ISVELPAP TWKKLFIP ++GTPRK+EIVFIAPTGEE
Sbjct: 5   EGVMMVEIEEAQADIGAVMD-EVISVELPAPPTWKKLFIPRRSGTPRKTEIVFIAPTGEE 64

Query: 65  FSSRKLLEQYLKLHSDAPAISEFDWSTGEAPRRSARISEKVKATPLKEEPPKKRSRKSSG 124
             +RKLLEQYLK H   PAISEFDWSTGE PRRSARISEKVKATP               
Sbjct: 65  IGNRKLLEQYLKSHPGGPAISEFDWSTGETPRRSARISEKVKATPPXXXXXXXXXXXXXX 124

Query: 125 SKKDYKEEAIAAPIVLEEIEMIDVEGNEKDKDGSDTRRADNGDNPKDEPKESEKGDADPD 184
                  EA A+    EE+EM D E NE +               K EPKE EK  ADPD
Sbjct: 125 XXXXXXXEANASVTGPEEVEMKDAEANENNI--PVXXXXXXXXXXKGEPKEIEKVGADPD 184

Query: 185 IR--------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 244
           I                                                           
Sbjct: 185 ISGKDKTGNDAGESKNGHTESLEATENIPQVKEGEKQDHEGGSDVVVNSEFVSMGETNKH 244

Query: 245 XXXXXXXDAIQVETEGLEEAEKQGNEVAEIVIPTEYSVAVASEVNHCE------------ 304
                  DAIQ +TEGLEEAEKQ NE+AE V P+E+  A+ASEVN  E            
Sbjct: 245 GSETNGQDAIQEKTEGLEEAEKQENEIAETVTPSEHITAIASEVNQSEKXXXXXXXXXXX 304

Query: 305 -XXXXXXXXXXPGDVVVQQANGVMEGVKQNDQNEAAATPDNVTKGNEDVSTNGAKCNVEA 348
            XXXXXXXXXX   V ++Q+NGV+EG KQNDQNEA    DN  KGN+D+STN AKCNV+ 
Sbjct: 305 XXXXXXXXXXXXXXVGIEQSNGVVEGEKQNDQNEATGVSDNEVKGNQDISTNAAKCNVQD 364

[Close]
BLAST of Carg06507 vs. TrEMBL
Match: tr|A0A2C9W1H0|A0A2C9W1H0_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_04G113200 PE=4 SV=1)

HSP 1 Score: 158.3 bits (399), Expect = 3.1e-35
Identity = 81/108 (75.00%), Postives = 89/108 (82.41%), Query Frame = 0 

Query: 24  EEAISVELPAPATWKKLFIPNKAGTPRKSEIVFIAPTGEEFSSRKLLEQYLKLHSDAPAI 83
           EE ISVELPAP  WKK+++P +AGTPRKSEI+FIAPTGEE ++RK LEQYLK H   PAI
Sbjct: 5   EEVISVELPAPPAWKKMYLPKRAGTPRKSEIMFIAPTGEEINNRKQLEQYLKSHPGNPAI 64

Query: 84  SEFDWSTGEAPRRSARISEKVKATPLKE-EPPKKRSRKSSGSKKDYKE 131
           SEFDW TGE PRRS RISEK KATP  + EPPKKR RKSSGSKKD KE
Sbjct: 65  SEFDWGTGETPRRSVRISEKAKATPTPDKEPPKKRGRKSSGSKKDGKE 112

[Close]
BLAST of Carg06507 vs. TrEMBL
Match: tr|A0A068TQ64|A0A068TQ64_COFCA (Uncharacterized protein OS=Coffea canephora OX=49390 GN=GSCOC_T00022157001 PE=4 SV=1)

HSP 1 Score: 156.8 bits (395), Expect = 9.1e-35
Identity = 98/172 (56.98%), Postives = 115/172 (66.86%), Query Frame = 0 

Query: 20  AAMDEEAISVELPAPATWKKLFIPNKAGTPRKSEIVFIAPTGEEFSSRKLLEQYLKLHSD 79
           A   EE +SVELPAPA+WKKLFIP K GTPRK+EIVF+APTGEE S RK LEQYLK H  
Sbjct: 5   AVNKEEVVSVELPAPASWKKLFIPKKGGTPRKNEIVFVAPTGEEISGRKQLEQYLKSHPG 64

Query: 80  APAISEFDWSTGEAPRRSARISEKVKATP--LKEEPPKKRSRKSSGSKKDYKEEAIAAPI 139
            P+ISEFDWSTGE PRRSARISEK+KATP   ++EPPKKR+RKS G+KKD KE   A   
Sbjct: 65  NPSISEFDWSTGETPRRSARISEKLKATPPSTEKEPPKKRARKSLGAKKDDKETDAAKQE 124

Query: 140 VLEE--IEMIDVEGNEKDKD----GSDTRRADNGDNPKDEPKESEKGDADPD 184
              +   EM+D    EK  +    G+D  RA   +    E K   +   +PD
Sbjct: 125 TENKGHEEMLDAGATEKKSEEPERGNDIIRATLAEG---EGKADAEDRKEPD 173

[Close]
BLAST of Carg06507 vs. TrEMBL
Match: tr|V7AQ12|V7AQ12_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_010G155700g PE=4 SV=1)

HSP 1 Score: 155.2 bits (391), Expect = 2.6e-34
Identity = 81/117 (69.23%), Postives = 94/117 (80.34%), Query Frame = 0 

Query: 15  QTQAAAAMDEEAISVELPAPATWKKLFIPNKAGTPRKSEIVFIAPTGEEFSSRKLLEQYL 74
           +++  +A  +E +SVEL AP+ WKKLF P K GTPRKSEIVFIAPTGEE +S+K LEQYL
Sbjct: 2   ESEPQSAGKDEVLSVELSAPSAWKKLFFPKKVGTPRKSEIVFIAPTGEEITSKKQLEQYL 61

Query: 75  KLHSDAPAISEFDWSTGEAPRRSARISEKVKATPLKE-EPPKKRSRKSSGSKKDYKE 131
           K H   PAISEFDW TGE PRRSARISEKVK++P  E EPP+KRSRKS GS+KD KE
Sbjct: 62  KAHPGNPAISEFDWGTGETPRRSARISEKVKSSPTAETEPPRKRSRKSFGSRKDNKE 118

The following BLAST results are available for this feature:
BLAST of Carg06507 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022955628.16.0e-12390.88methyl-CpG-binding domain-containing protein 11-like [Cucurbita moschata] >XP_02... [more]
XP_023526858.11.3e-11485.59methyl-CpG-binding domain-containing protein 11-like [Cucurbita pepo subsp. pepo... [more]
XP_022979415.18.1e-10474.41methyl-CpG-binding domain-containing protein 11-like [Cucurbita maxima][more]
XP_008454229.11.3e-7252.22PREDICTED: methyl-CpG-binding domain-containing protein 11-like [Cucumis melo][more]
XP_022153629.17.2e-6847.29methyl-CpG-binding domain-containing protein 10-like isoform X1 [Momordica chara... [more]
BLAST of Carg06507 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G15790.12.0e-3255.19methyl-CPG-binding domain 11[more]
AT1G15340.15.9e-3267.00methyl-CPG-binding domain 10[more]
BLAST of Carg06507 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9LW00|MBD11_ARATH3.7e-3155.19Methyl-CpG-binding domain-containing protein 11 OS=Arabidopsis thaliana OX=3702 ... [more]
sp|Q9XI36|MBD10_ARATH1.1e-3067.00Methyl-CpG-binding domain-containing protein 10 OS=Arabidopsis thaliana OX=3702 ... [more]
BLAST of Carg06507 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3BY89|A0A1S3BY89_CUCME8.4e-7352.22methyl-CpG-binding domain-containing protein 11-like OS=Cucumis melo OX=3656 GN=... [more]
tr|A0A0A0KVG4|A0A0A0KVG4_CUCSA2.7e-6349.34Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G005520 PE=4 SV=1[more]
tr|A0A2C9W1H0|A0A2C9W1H0_MANES3.1e-3575.00Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_04G113200 PE=4 SV=... [more]
tr|A0A068TQ64|A0A068TQ64_COFCA9.1e-3556.98Uncharacterized protein OS=Coffea canephora OX=49390 GN=GSCOC_T00022157001 PE=4 ... [more]
tr|V7AQ12|V7AQ12_PHAVU2.6e-3469.23Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_010G155700g PE=4 ... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
Vocabulary: INTERPRO
TermDefinition
IPR016177DNA-bd_dom_sf
IPR001739Methyl_CpG_DNA-bd
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005634 nucleus
molecular_function GO:0003677 DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg06507-RACarg06507-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001739Methyl-CpG DNA bindingPFAMPF01429MBDcoord: 29..93
e-value: 3.5E-11
score: 42.6
IPR001739Methyl-CpG DNA bindingPROSITEPS50982MBDcoord: 23..93
score: 12.137
NoneNo IPR availableGENE3DG3DSA:3.30.890.10coord: 3..129
e-value: 2.0E-6
score: 29.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 293..323
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 293..347
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 329..347
NoneNo IPR availablePANTHERPTHR33729FAMILY NOT NAMEDcoord: 23..328
NoneNo IPR availablePANTHERPTHR33729:SF4METHYL-CPG-BINDING DOMAIN-CONTAINING PROTEIN 10-RELATEDcoord: 23..328
IPR016177DNA-binding domain superfamilySUPERFAMILYSSF54171DNA-binding domaincoord: 23..114

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Carg06507Cla015366Watermelon (97103) v1carwmB0117
Carg06507Cla012717Watermelon (97103) v1carwmB0120
Carg06507Csa4G005520Cucumber (Chinese Long) v2carcuB0128
Carg06507Csa7G432540Cucumber (Chinese Long) v2carcuB0130
Carg06507MELO3C023419Melon (DHL92) v3.5.1carmeB0121
Carg06507MELO3C017880Melon (DHL92) v3.5.1carmeB0127
Carg06507ClCG09G002910Watermelon (Charleston Gray)carwcgB0117
Carg06507ClCG07G012610Watermelon (Charleston Gray)carwcgB0121
Carg06507CSPI07G20570Wild cucumber (PI 183967)carcpiB0135
Carg06507CSPI04G01610Wild cucumber (PI 183967)carcpiB0133
Carg06507Cucsa.096390Cucumber (Gy14) v1carcgyB0141
Carg06507CmaCh01G001430Cucurbita maxima (Rimu)carcmaB0157
Carg06507CmaCh14G013480Cucurbita maxima (Rimu)carcmaB0154
Carg06507CmoCh14G013740Cucurbita moschata (Rifu)carcmoB0163
Carg06507CmoCh01G001510Cucurbita moschata (Rifu)carcmoB0166
Carg06507Lsi02G027130Bottle gourd (USVL1VR-Ls)carlsiB106
Carg06507Lsi07G004570Bottle gourd (USVL1VR-Ls)carlsiB109
Carg06507Cp4.1LG17g08950Cucurbita pepo (Zucchini)carcpeB0173
Carg06507Cp4.1LG02g14780Cucurbita pepo (Zucchini)carcpeB0175
Carg06507Cp4.1LG03g13750Cucurbita pepo (Zucchini)carcpeB0176
Carg06507CsGy4G001450Cucumber (Gy14) v2carcgybB0127
Carg06507MELO3C017880.2Melon (DHL92) v3.6.1carmedB0131
Carg06507MELO3C023419.2Melon (DHL92) v3.6.1carmedB0124
Carg06507CsaV3_7G032420Cucumber (Chinese Long) v3carcucB0139
Carg06507CsaV3_4G001590Cucumber (Chinese Long) v3carcucB0137
Carg06507Cla97C07G139410Watermelon (97103) v2carwmbB0126
Carg06507Cla97C09G165060Watermelon (97103) v2carwmbB0127
Carg06507Bhi01G002753Wax gourdcarwgoB0145
Carg06507Bhi09G000020Wax gourdcarwgoB0150
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Carg06507Carg04228Silver-seed gourdcarcarB139
The following block(s) are covering this gene:
GeneOrganismBlock
Carg06507Wax gourdcarwgoB0139