Carg04228 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.TCTCTCTCAACGGTTTATGTGTTCTTTTTTGGCCACAAGACCAAAAACTGGAGAGAAGAGAGAGAAGTTAGACAGATTTCTAGAGAGAGAAAGTGAGAAAAATGGAGAACAAAGAGGAAGCCATGCTGATAGTGGAAGATGAAGCTCAAACTAAGAGTAGAGAAGGAGTAGCAGCCATGGATGAAGTCATTTCTGTGGAGCTTCCTGCCCCACCTACTTGGAAGAAACTGGTCTCTCTCTCTCTCTCTCTCTAAAAGTTTGAAATTTTCTCTAAATTTAGGCTCTTTTTTGCCAGAAAGAAGCTTTTATCCTCTTGATATTGCAGTTTTTGTGTCTGTTCTTGTGAATTTCATCTCAAATGTTCTGTTTTTGTGTTAAAGTTTGTGTTTTTTTTGGGGGGTTTAGAACTCTGTTTTTAGCTCTAGGGCTTGTTTGCATGGTTAGGGTTCTGTTACATCCTTAATTCCTTGTCTTTTGAAAGCTGTCTTGTTGAACAGTCCATTGATTCTTTTCTTGTGGGTAGAATTGTTGAAAAATTAGGCGTTTCTTTGGTGCTTCTTTTCCCTGAGTTCTTCATTTTTTTTTTCTTTTCAAAGATTGGGTATGAAATGTAAGCTTATGGGGAATCTTTTGGATTTTGAAGTGAAAAACGAGCTTCTATGAAGTTCTAGATGATGAATACCTATGAAAGAGCTTCTGTTTGATTGAAAACAAGGAACTGTATGTACCATTTGACCTGCTGGAGTGTTTTACTTAAAGAGTGTTAACCTGAGATCCCACGACGGTTGGAGAGGAGAACGAAACATTCTTTACAAGGGTGTAGAAATCTCTCGCTAGCATACGTGTTTTAAAAACCTTGAGAGAAAACTCGGAAGAGAAAGTCCAAAGAGGACAATATCGGCTAGCTGTAGCCCACGGTTAAGTTTTCTAGGCTTCTCGAATGATAGCACGTGGTGTCATGTGTTTGATATTCTTGATCTTGTGTGCTCTTGAGATACTTGGAAAGCTTCATCTTGGGAAGCACTTTTGAAACTGTCGGTGCCTAAAGCTGTCTGCTCTTTAGGGCTGCAATAGAAAACTGAATCCAATGCTTTTGATCTGAGGCCTACATGTTTTTAACCTAAGTTCAGGCTGTTTTTGAAGTGTTATATGAATCATGCTGAGGAGTTTTGTGGCTTTTATTGTATTAGCTGTGGTGACCAAATGATTTGTTTGAACTATGAAGCTTGTCAGTTCTTGATGTTTTATCAATAGTCCTATTGTAACACGGTTTGCTGTTGGAGATTGCCTCAATTCTTTGAAACAGTGAAATCTACCACGGTTTTTTCCCCACGATGTTGAATATTGATTGTATTAATCTAAGCTCACCACTAGTAGATATTGTCCGTTTGGCCTGTTACGTATCGCCGTCAGTCTCACGGTTTTGAAACGCGTCTATTAGGGAGAGGTTCCACACCCTTATAAGAAATGCTTTATTCCCCTTTCCAACCGACGTAGGATCTCATAATGATAATTGTTCAATTCGCCCCCATCCATCCCTGCCATCTTTTCCATGTTTGTTCTTTCTGGATTTTTCATAACATGTTCGGGTGGCTTGATATGACAGCCGAAACCAACCGCTAGCAGATATTGTTCTCTTTGGGCTTTCCCTTCCGGGCTTCCCCTTAAGGTTTTAAAACGTGTTCATTAGGTAGAGGTTTCCGTACTCTCATAAGGAATGCTTTGTTCTCCTCTCCAACCGATATGGGATCTCACACTTGACACTTGAGACTAATGCATGTTGTATTATGAAATCTGCCAAACTCTCGACCTTTAGCGTATATGGATCTTCTCCTTTTGGAAGATTTTCATGTTATGACTGACAAATTGTTTTTCTTGTTTCAGTTCATACCCAAGAGGGCAGGCACACCAAGAAAGAGTGAGATTGTATTCATTGCTCCAACTGGTGAAGAAATTGGTAACAGGAAACTGCTGGAGCAGTACCTAAAATTGCATCCTGGTAGTCTTGCAATATCGGAGTTTGATTGGAGCACGGGCGAGGCGCCTAGAAGATCAGTAAGGATTAGTGAGAAGGTTAAGGAAACTCCGCCTAAAGAGGAGCCTCCGAAGAAACGGAGCCGAAAATCCTCCGGTTCGAAGAAAGACATGAAGGAGGAAGCTGATGCAGTTCCTAAAGTTCCTGAAGAAGTTGAAATGAAAGATGCAGAGGGGAATGACAGGGCGGGTGGCTATGTTGGTGAAGCTGAAAATGGTCAAACAGAACACCAGGCAGCCACCGAGGAGATGGCTCCTGAGGTGAAAGAAGATGAAAAGCAAGTCCTCAAGGGAAGTTCCGATGTCGATGTTAACTCTGAATTTGTCGGTAAAGACGAAACGGATAAGAATGGTGGCGAAACCGACGGTCGAGGTTACATTGAAGAAGCTGAAAAGCAAGGAAATGATGTAGTAGAAACAGTCTCACCTAATGAGCATACTGTTGCTACTGAGGTTAACCAATCTGAAAAAGAGACGAACCAAGAAAACAACATTCCCGACAAGGATGAAAACGATCCTGGCAATGTCGTTGTTCTACAAGCGAAAGGAGTCGTCGAGGAAGAGAAACAAAATGATCTGAATGAAGCAGCAGCACCAGAAGACAATGAGGCCAAGTGTAATCACGACGTTTCAACAAATGGTGCAGCTCATGCCGAGGACCGAAGCATCGAAGACGATAACTTGGCAAAAGAAAATGGGAAGCTTTAG TCTCTCTCAACGGTTTATGTGTTCTTTTTTGGCCACAAGACCAAAAACTGGAGAGAAGAGAGAGAAGTTAGACAGATTTCTAGAGAGAGAAAGTGAGAAAAATGGAGAACAAAGAGGAAGCCATGCTGATAGTGGAAGATGAAGCTCAAACTAAGAGTAGAGAAGGAGTAGCAGCCATGGATGAAGTCATTTCTGTGGAGCTTCCTGCCCCACCTACTTGGAAGAAACTGTTCATACCCAAGAGGGCAGGCACACCAAGAAAGAGTGAGATTGTATTCATTGCTCCAACTGGTGAAGAAATTGGTAACAGGAAACTGCTGGAGCAGTACCTAAAATTGCATCCTGGTAGTCTTGCAATATCGGAGTTTGATTGGAGCACGGGCGAGGCGCCTAGAAGATCAGTAAGGATTAGTGAGAAGGTTAAGGAAACTCCGCCTAAAGAGGAGCCTCCGAAGAAACGGAGCCGAAAATCCTCCGGTTCGAAGAAAGACATGAAGGAGGAAGCTGATGCAGTTCCTAAAGTTCCTGAAGAAGTTGAAATGAAAGATGCAGAGGGGAATGACAGGGCGGGTGGCTATGTTGGTGAAGCTGAAAATGGTCAAACAGAACACCAGGCAGCCACCGAGGAGATGGCTCCTGAGGTGAAAGAAGATGAAAAGCAAGTCCTCAAGGGAAGTTCCGATGTCGATGTTAACTCTGAATTTGTCGGTAAAGACGAAACGGATAAGAATGGTGGCGAAACCGACGGTCGAGGTTACATTGAAGAAGCTGAAAAGCAAGGAAATGATGTAGTAGAAACAGTCTCACCTAATGAGCATACTGTTGCTACTGAGGTTAACCAATCTGAAAAAGAGACGAACCAAGAAAACAACATTCCCGACAAGGATGAAAACGATCCTGGCAATGTCGTTGTTCTACAAGCGAAAGGAGTCGTCGAGGAAGAGAAACAAAATGATCTGAATGAAGCAGCAGCACCAGAAGACAATGAGGCCAAGTGTAATCACGACGTTTCAACAAATGGTGCAGCTCATGCCGAGGACCGAAGCATCGAAGACGATAACTTGGCAAAAGAAAATGGGAAGCTTTAG ATGGAGAACAAAGAGGAAGCCATGCTGATAGTGGAAGATGAAGCTCAAACTAAGAGTAGAGAAGGAGTAGCAGCCATGGATGAAGTCATTTCTGTGGAGCTTCCTGCCCCACCTACTTGGAAGAAACTGTTCATACCCAAGAGGGCAGGCACACCAAGAAAGAGTGAGATTGTATTCATTGCTCCAACTGGTGAAGAAATTGGTAACAGGAAACTGCTGGAGCAGTACCTAAAATTGCATCCTGGTAGTCTTGCAATATCGGAGTTTGATTGGAGCACGGGCGAGGCGCCTAGAAGATCAGTAAGGATTAGTGAGAAGGTTAAGGAAACTCCGCCTAAAGAGGAGCCTCCGAAGAAACGGAGCCGAAAATCCTCCGGTTCGAAGAAAGACATGAAGGAGGAAGCTGATGCAGTTCCTAAAGTTCCTGAAGAAGTTGAAATGAAAGATGCAGAGGGGAATGACAGGGCGGGTGGCTATGTTGGTGAAGCTGAAAATGGTCAAACAGAACACCAGGCAGCCACCGAGGAGATGGCTCCTGAGGTGAAAGAAGATGAAAAGCAAGTCCTCAAGGGAAGTTCCGATGTCGATGTTAACTCTGAATTTGTCGGTAAAGACGAAACGGATAAGAATGGTGGCGAAACCGACGGTCGAGGTTACATTGAAGAAGCTGAAAAGCAAGGAAATGATGTAGTAGAAACAGTCTCACCTAATGAGCATACTGTTGCTACTGAGGTTAACCAATCTGAAAAAGAGACGAACCAAGAAAACAACATTCCCGACAAGGATGAAAACGATCCTGGCAATGTCGTTGTTCTACAAGCGAAAGGAGTCGTCGAGGAAGAGAAACAAAATGATCTGAATGAAGCAGCAGCACCAGAAGACAATGAGGCCAAGTGTAATCACGACGTTTCAACAAATGGTGCAGCTCATGCCGAGGACCGAAGCATCGAAGACGATAACTTGGCAAAAGAAAATGGGAAGCTTTAG MENKEEAMLIVEDEAQTKSREGVAAMDEVISVELPAPPTWKKLFIPKRAGTPRKSEIVFIAPTGEEIGNRKLLEQYLKLHPGSLAISEFDWSTGEAPRRSVRISEKVKETPPKEEPPKKRSRKSSGSKKDMKEEADAVPKVPEEVEMKDAEGNDRAGGYVGEAENGQTEHQAATEEMAPEVKEDEKQVLKGSSDVDVNSEFVGKDETDKNGGETDGRGYIEEAEKQGNDVVETVSPNEHTVATEVNQSEKETNQENNIPDKDENDPGNVVVLQAKGVVEEEKQNDLNEAAAPEDNEAKCNHDVSTNGAAHAEDRSIEDDNLAKENGKL
BLAST of Carg04228 vs. NCBI nr
Match: XP_022948683.1 (methyl-CpG-binding domain-containing protein 11-like [Cucurbita moschata]) HSP 1 Score: 480.7 bits (1236), Expect = 3.9e-132 Identity = 301/328 (91.77%), Postives = 304/328 (92.68%), Query Frame = 0
BLAST of Carg04228 vs. NCBI nr
Match: XP_023525889.1 (methyl-CpG-binding domain-containing protein 11-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 449.9 bits (1156), Expect = 7.4e-123 Identity = 290/331 (87.61%), Postives = 296/331 (89.43%), Query Frame = 0
BLAST of Carg04228 vs. NCBI nr
Match: XP_022998317.1 (methyl-CpG-binding domain-containing protein 11-like [Cucurbita maxima]) HSP 1 Score: 448.4 bits (1152), Expect = 2.2e-122 Identity = 266/328 (81.10%), Postives = 274/328 (83.54%), Query Frame = 0
BLAST of Carg04228 vs. NCBI nr
Match: XP_022153629.1 (methyl-CpG-binding domain-containing protein 10-like isoform X1 [Momordica charantia]) HSP 1 Score: 276.2 bits (705), Expect = 1.5e-70 Identity = 215/414 (51.93%), Postives = 233/414 (56.28%), Query Frame = 0
BLAST of Carg04228 vs. NCBI nr
Match: XP_008454229.1 (PREDICTED: methyl-CpG-binding domain-containing protein 11-like [Cucumis melo]) HSP 1 Score: 262.3 bits (669), Expect = 2.2e-66 Identity = 228/385 (59.22%), Postives = 249/385 (64.68%), Query Frame = 0
BLAST of Carg04228 vs. TAIR10
Match: AT1G15340.1 (methyl-CPG-binding domain 10) HSP 1 Score: 139.4 bits (350), Expect = 3.9e-33 Identity = 63/84 (75.00%), Postives = 74/84 (88.10%), Query Frame = 0
BLAST of Carg04228 vs. TAIR10
Match: AT3G15790.1 (methyl-CPG-binding domain 11) HSP 1 Score: 128.6 bits (322), Expect = 6.9e-30 Identity = 79/168 (47.02%), Postives = 95/168 (56.55%), Query Frame = 0
BLAST of Carg04228 vs. Swiss-Prot
Match: sp|Q9XI36|MBD10_ARATH (Methyl-CpG-binding domain-containing protein 10 OS=Arabidopsis thaliana OX=3702 GN=MBD10 PE=1 SV=1) HSP 1 Score: 139.4 bits (350), Expect = 7.0e-32 Identity = 63/84 (75.00%), Postives = 74/84 (88.10%), Query Frame = 0
BLAST of Carg04228 vs. Swiss-Prot
Match: sp|Q9LW00|MBD11_ARATH (Methyl-CpG-binding domain-containing protein 11 OS=Arabidopsis thaliana OX=3702 GN=MBD11 PE=1 SV=1) HSP 1 Score: 128.6 bits (322), Expect = 1.2e-28 Identity = 79/168 (47.02%), Postives = 95/168 (56.55%), Query Frame = 0
BLAST of Carg04228 vs. TrEMBL
Match: tr|A0A1S3BY89|A0A1S3BY89_CUCME (methyl-CpG-binding domain-containing protein 11-like OS=Cucumis melo OX=3656 GN=LOC103494699 PE=4 SV=1) HSP 1 Score: 262.3 bits (669), Expect = 1.4e-66 Identity = 228/385 (59.22%), Postives = 249/385 (64.68%), Query Frame = 0
BLAST of Carg04228 vs. TrEMBL
Match: tr|A0A0A0KVG4|A0A0A0KVG4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G005520 PE=4 SV=1) HSP 1 Score: 253.8 bits (647), Expect = 5.2e-64 Identity = 221/382 (57.85%), Postives = 244/382 (63.87%), Query Frame = 0
BLAST of Carg04228 vs. TrEMBL
Match: tr|A0A2C9W1H0|A0A2C9W1H0_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_04G113200 PE=4 SV=1) HSP 1 Score: 154.1 bits (388), Expect = 5.6e-34 Identity = 80/130 (61.54%), Postives = 92/130 (70.77%), Query Frame = 0
BLAST of Carg04228 vs. TrEMBL
Match: tr|A0A067KZ09|A0A067KZ09_JATCU (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_06140 PE=4 SV=1) HSP 1 Score: 150.6 bits (379), Expect = 6.1e-33 Identity = 70/87 (80.46%), Postives = 76/87 (87.36%), Query Frame = 0
BLAST of Carg04228 vs. TrEMBL
Match: tr|A0A2G9GU35|A0A2G9GU35_9LAMI (Uncharacterized protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_18891 PE=4 SV=1) HSP 1 Score: 147.5 bits (371), Expect = 5.2e-32 Identity = 67/85 (78.82%), Postives = 75/85 (88.24%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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