Carg04228 (gene) Silver-seed gourd

NameCarg04228
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
Descriptionmethyl-CpG-binding domain-containing protein 11-like
LocationCucurbita_argyrosperma_scaffold_044 : 957498 .. 960239 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
TCTCTCTCAACGGTTTATGTGTTCTTTTTTGGCCACAAGACCAAAAACTGGAGAGAAGAGAGAGAAGTTAGACAGATTTCTAGAGAGAGAAAGTGAGAAAAATGGAGAACAAAGAGGAAGCCATGCTGATAGTGGAAGATGAAGCTCAAACTAAGAGTAGAGAAGGAGTAGCAGCCATGGATGAAGTCATTTCTGTGGAGCTTCCTGCCCCACCTACTTGGAAGAAACTGGTCTCTCTCTCTCTCTCTCTCTAAAAGTTTGAAATTTTCTCTAAATTTAGGCTCTTTTTTGCCAGAAAGAAGCTTTTATCCTCTTGATATTGCAGTTTTTGTGTCTGTTCTTGTGAATTTCATCTCAAATGTTCTGTTTTTGTGTTAAAGTTTGTGTTTTTTTTGGGGGGTTTAGAACTCTGTTTTTAGCTCTAGGGCTTGTTTGCATGGTTAGGGTTCTGTTACATCCTTAATTCCTTGTCTTTTGAAAGCTGTCTTGTTGAACAGTCCATTGATTCTTTTCTTGTGGGTAGAATTGTTGAAAAATTAGGCGTTTCTTTGGTGCTTCTTTTCCCTGAGTTCTTCATTTTTTTTTTCTTTTCAAAGATTGGGTATGAAATGTAAGCTTATGGGGAATCTTTTGGATTTTGAAGTGAAAAACGAGCTTCTATGAAGTTCTAGATGATGAATACCTATGAAAGAGCTTCTGTTTGATTGAAAACAAGGAACTGTATGTACCATTTGACCTGCTGGAGTGTTTTACTTAAAGAGTGTTAACCTGAGATCCCACGACGGTTGGAGAGGAGAACGAAACATTCTTTACAAGGGTGTAGAAATCTCTCGCTAGCATACGTGTTTTAAAAACCTTGAGAGAAAACTCGGAAGAGAAAGTCCAAAGAGGACAATATCGGCTAGCTGTAGCCCACGGTTAAGTTTTCTAGGCTTCTCGAATGATAGCACGTGGTGTCATGTGTTTGATATTCTTGATCTTGTGTGCTCTTGAGATACTTGGAAAGCTTCATCTTGGGAAGCACTTTTGAAACTGTCGGTGCCTAAAGCTGTCTGCTCTTTAGGGCTGCAATAGAAAACTGAATCCAATGCTTTTGATCTGAGGCCTACATGTTTTTAACCTAAGTTCAGGCTGTTTTTGAAGTGTTATATGAATCATGCTGAGGAGTTTTGTGGCTTTTATTGTATTAGCTGTGGTGACCAAATGATTTGTTTGAACTATGAAGCTTGTCAGTTCTTGATGTTTTATCAATAGTCCTATTGTAACACGGTTTGCTGTTGGAGATTGCCTCAATTCTTTGAAACAGTGAAATCTACCACGGTTTTTTCCCCACGATGTTGAATATTGATTGTATTAATCTAAGCTCACCACTAGTAGATATTGTCCGTTTGGCCTGTTACGTATCGCCGTCAGTCTCACGGTTTTGAAACGCGTCTATTAGGGAGAGGTTCCACACCCTTATAAGAAATGCTTTATTCCCCTTTCCAACCGACGTAGGATCTCATAATGATAATTGTTCAATTCGCCCCCATCCATCCCTGCCATCTTTTCCATGTTTGTTCTTTCTGGATTTTTCATAACATGTTCGGGTGGCTTGATATGACAGCCGAAACCAACCGCTAGCAGATATTGTTCTCTTTGGGCTTTCCCTTCCGGGCTTCCCCTTAAGGTTTTAAAACGTGTTCATTAGGTAGAGGTTTCCGTACTCTCATAAGGAATGCTTTGTTCTCCTCTCCAACCGATATGGGATCTCACACTTGACACTTGAGACTAATGCATGTTGTATTATGAAATCTGCCAAACTCTCGACCTTTAGCGTATATGGATCTTCTCCTTTTGGAAGATTTTCATGTTATGACTGACAAATTGTTTTTCTTGTTTCAGTTCATACCCAAGAGGGCAGGCACACCAAGAAAGAGTGAGATTGTATTCATTGCTCCAACTGGTGAAGAAATTGGTAACAGGAAACTGCTGGAGCAGTACCTAAAATTGCATCCTGGTAGTCTTGCAATATCGGAGTTTGATTGGAGCACGGGCGAGGCGCCTAGAAGATCAGTAAGGATTAGTGAGAAGGTTAAGGAAACTCCGCCTAAAGAGGAGCCTCCGAAGAAACGGAGCCGAAAATCCTCCGGTTCGAAGAAAGACATGAAGGAGGAAGCTGATGCAGTTCCTAAAGTTCCTGAAGAAGTTGAAATGAAAGATGCAGAGGGGAATGACAGGGCGGGTGGCTATGTTGGTGAAGCTGAAAATGGTCAAACAGAACACCAGGCAGCCACCGAGGAGATGGCTCCTGAGGTGAAAGAAGATGAAAAGCAAGTCCTCAAGGGAAGTTCCGATGTCGATGTTAACTCTGAATTTGTCGGTAAAGACGAAACGGATAAGAATGGTGGCGAAACCGACGGTCGAGGTTACATTGAAGAAGCTGAAAAGCAAGGAAATGATGTAGTAGAAACAGTCTCACCTAATGAGCATACTGTTGCTACTGAGGTTAACCAATCTGAAAAAGAGACGAACCAAGAAAACAACATTCCCGACAAGGATGAAAACGATCCTGGCAATGTCGTTGTTCTACAAGCGAAAGGAGTCGTCGAGGAAGAGAAACAAAATGATCTGAATGAAGCAGCAGCACCAGAAGACAATGAGGCCAAGTGTAATCACGACGTTTCAACAAATGGTGCAGCTCATGCCGAGGACCGAAGCATCGAAGACGATAACTTGGCAAAAGAAAATGGGAAGCTTTAG

mRNA sequence

TCTCTCTCAACGGTTTATGTGTTCTTTTTTGGCCACAAGACCAAAAACTGGAGAGAAGAGAGAGAAGTTAGACAGATTTCTAGAGAGAGAAAGTGAGAAAAATGGAGAACAAAGAGGAAGCCATGCTGATAGTGGAAGATGAAGCTCAAACTAAGAGTAGAGAAGGAGTAGCAGCCATGGATGAAGTCATTTCTGTGGAGCTTCCTGCCCCACCTACTTGGAAGAAACTGTTCATACCCAAGAGGGCAGGCACACCAAGAAAGAGTGAGATTGTATTCATTGCTCCAACTGGTGAAGAAATTGGTAACAGGAAACTGCTGGAGCAGTACCTAAAATTGCATCCTGGTAGTCTTGCAATATCGGAGTTTGATTGGAGCACGGGCGAGGCGCCTAGAAGATCAGTAAGGATTAGTGAGAAGGTTAAGGAAACTCCGCCTAAAGAGGAGCCTCCGAAGAAACGGAGCCGAAAATCCTCCGGTTCGAAGAAAGACATGAAGGAGGAAGCTGATGCAGTTCCTAAAGTTCCTGAAGAAGTTGAAATGAAAGATGCAGAGGGGAATGACAGGGCGGGTGGCTATGTTGGTGAAGCTGAAAATGGTCAAACAGAACACCAGGCAGCCACCGAGGAGATGGCTCCTGAGGTGAAAGAAGATGAAAAGCAAGTCCTCAAGGGAAGTTCCGATGTCGATGTTAACTCTGAATTTGTCGGTAAAGACGAAACGGATAAGAATGGTGGCGAAACCGACGGTCGAGGTTACATTGAAGAAGCTGAAAAGCAAGGAAATGATGTAGTAGAAACAGTCTCACCTAATGAGCATACTGTTGCTACTGAGGTTAACCAATCTGAAAAAGAGACGAACCAAGAAAACAACATTCCCGACAAGGATGAAAACGATCCTGGCAATGTCGTTGTTCTACAAGCGAAAGGAGTCGTCGAGGAAGAGAAACAAAATGATCTGAATGAAGCAGCAGCACCAGAAGACAATGAGGCCAAGTGTAATCACGACGTTTCAACAAATGGTGCAGCTCATGCCGAGGACCGAAGCATCGAAGACGATAACTTGGCAAAAGAAAATGGGAAGCTTTAG

Coding sequence (CDS)

ATGGAGAACAAAGAGGAAGCCATGCTGATAGTGGAAGATGAAGCTCAAACTAAGAGTAGAGAAGGAGTAGCAGCCATGGATGAAGTCATTTCTGTGGAGCTTCCTGCCCCACCTACTTGGAAGAAACTGTTCATACCCAAGAGGGCAGGCACACCAAGAAAGAGTGAGATTGTATTCATTGCTCCAACTGGTGAAGAAATTGGTAACAGGAAACTGCTGGAGCAGTACCTAAAATTGCATCCTGGTAGTCTTGCAATATCGGAGTTTGATTGGAGCACGGGCGAGGCGCCTAGAAGATCAGTAAGGATTAGTGAGAAGGTTAAGGAAACTCCGCCTAAAGAGGAGCCTCCGAAGAAACGGAGCCGAAAATCCTCCGGTTCGAAGAAAGACATGAAGGAGGAAGCTGATGCAGTTCCTAAAGTTCCTGAAGAAGTTGAAATGAAAGATGCAGAGGGGAATGACAGGGCGGGTGGCTATGTTGGTGAAGCTGAAAATGGTCAAACAGAACACCAGGCAGCCACCGAGGAGATGGCTCCTGAGGTGAAAGAAGATGAAAAGCAAGTCCTCAAGGGAAGTTCCGATGTCGATGTTAACTCTGAATTTGTCGGTAAAGACGAAACGGATAAGAATGGTGGCGAAACCGACGGTCGAGGTTACATTGAAGAAGCTGAAAAGCAAGGAAATGATGTAGTAGAAACAGTCTCACCTAATGAGCATACTGTTGCTACTGAGGTTAACCAATCTGAAAAAGAGACGAACCAAGAAAACAACATTCCCGACAAGGATGAAAACGATCCTGGCAATGTCGTTGTTCTACAAGCGAAAGGAGTCGTCGAGGAAGAGAAACAAAATGATCTGAATGAAGCAGCAGCACCAGAAGACAATGAGGCCAAGTGTAATCACGACGTTTCAACAAATGGTGCAGCTCATGCCGAGGACCGAAGCATCGAAGACGATAACTTGGCAAAAGAAAATGGGAAGCTTTAG

Protein sequence

MENKEEAMLIVEDEAQTKSREGVAAMDEVISVELPAPPTWKKLFIPKRAGTPRKSEIVFIAPTGEEIGNRKLLEQYLKLHPGSLAISEFDWSTGEAPRRSVRISEKVKETPPKEEPPKKRSRKSSGSKKDMKEEADAVPKVPEEVEMKDAEGNDRAGGYVGEAENGQTEHQAATEEMAPEVKEDEKQVLKGSSDVDVNSEFVGKDETDKNGGETDGRGYIEEAEKQGNDVVETVSPNEHTVATEVNQSEKETNQENNIPDKDENDPGNVVVLQAKGVVEEEKQNDLNEAAAPEDNEAKCNHDVSTNGAAHAEDRSIEDDNLAKENGKL
BLAST of Carg04228 vs. NCBI nr
Match: XP_022948683.1 (methyl-CpG-binding domain-containing protein 11-like [Cucurbita moschata])

HSP 1 Score: 480.7 bits (1236), Expect = 3.9e-132
Identity = 301/328 (91.77%), Postives = 304/328 (92.68%), Query Frame = 0

Query: 1   MENKEEAMLIVEDEAQTKSREGVAAMDEVISVELPAPPTWKKLFIPKRAGTPRKSEIVFI 60
           MENKEEAMLIVEDEAQTKSREGVAAMDEVISVELPAPPTWKKLFIPKRAGTPRKSEIVFI
Sbjct: 1   MENKEEAMLIVEDEAQTKSREGVAAMDEVISVELPAPPTWKKLFIPKRAGTPRKSEIVFI 60

Query: 61  APTGEEIGNRKLLEQYLKLHPGSLAISEFDWSTGEAPRRSVRISEKVKETPXXXXXXXXX 120
           APTGEEIGNRKLLEQYLKLHPGS AISEFDWSTGEAPRRSVRISEKVKETPXXXXXXXXX
Sbjct: 61  APTGEEIGNRKLLEQYLKLHPGSPAISEFDWSTGEAPRRSVRISEKVKETPXXXXXXXXX 120

Query: 121 XXXXXXXXXDMKEEADAVPKVPEEVEMKDAEGNDRAGGYVGEAENGQTEHQAATEEMAPE 180
           XXXXXXXXXDMKEEADAVPKVPEEVEMKDAEGND+AGGYVGEAENGQTEHQAATEEMAPE
Sbjct: 121 XXXXXXXXXDMKEEADAVPKVPEEVEMKDAEGNDKAGGYVGEAENGQTEHQAATEEMAPE 180

Query: 181 VKEDEKQVLKGSSDVDVNSEFVGKDETDKNGGETDGRGYIEEAEKXXXXXXXXXXXXXXX 240
           VKEDEKQVLKGSSDVDVNSEFVGKDETDKNGGETDGRGYIEEAEK               
Sbjct: 181 VKEDEKQVLKGSSDVDVNSEFVGKDETDKNGGETDGRGYIEEAEKQGNDVAETVSPNEHT 240

Query: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXVVVLQAKGVVEEEKQNDLNEAAAPEDNEAKCN 300
                 XXXXXXXXXXXXXXXXXXXX  VVVLQAKGVVEEEKQNDLNEAAAPEDNEAKCN
Sbjct: 241 VATEVNXXXXXXXXXXXXXXXXXXXXGNVVVLQAKGVVEEEKQNDLNEAAAPEDNEAKCN 300

Query: 301 HDVSTNGAAHAEDRSIEDDNLAKENGKL 329
           HDVSTNGAAHAEDRSI+DDN+AKENGKL
Sbjct: 301 HDVSTNGAAHAEDRSIKDDNMAKENGKL 328

BLAST of Carg04228 vs. NCBI nr
Match: XP_023525889.1 (methyl-CpG-binding domain-containing protein 11-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 449.9 bits (1156), Expect = 7.4e-123
Identity = 290/331 (87.61%), Postives = 296/331 (89.43%), Query Frame = 0

Query: 1   MENKEEAMLIVEDEAQTKSREGVAAMDEVISVELPAPPTWKKLFIPKRAGTPRKSEIVFI 60
           MENKEEAMLI+EDEAQTKSREGVAAMDEVISVELPAPP WKKLFIPKRAGTPRKSEIVFI
Sbjct: 1   MENKEEAMLIMEDEAQTKSREGVAAMDEVISVELPAPPAWKKLFIPKRAGTPRKSEIVFI 60

Query: 61  APTGEEIGNRKLLEQYLKLHPGSLAISEFDWSTGEAPRRSVRISEKVKETPXXXXXXXXX 120
           APTGEEIGNRKLLEQYLKLHPGS AISEFDWSTGEAPRRSVRISEKVKETP  XXXXXXX
Sbjct: 61  APTGEEIGNRKLLEQYLKLHPGSPAISEFDWSTGEAPRRSVRISEKVKETPPKXXXXXXX 120

Query: 121 XXXXXXXXXDMKEEADAVPKVPEEVEMKDAEGNDRAGGYVGEAENGQTEHQAATEEMAPE 180
           XXXXXXXX DMKEEADAVPKVPEEVEMKDAEGND+AG YVGEAENGQTEHQ    EMAPE
Sbjct: 121 XXXXXXXXKDMKEEADAVPKVPEEVEMKDAEGNDKAGAYVGEAENGQTEHQ----EMAPE 180

Query: 181 VKEDEKQVLKGSSDVDVNSEFVGKDETDKNGGETDGRGYIEEAEK---XXXXXXXXXXXX 240
            KE EKQVLKGSS+VDVNSEFVGKDETDKNGGETDGRGYI+EAEK               
Sbjct: 181 AKEGEKQVLKGSSEVDVNSEFVGKDETDKNGGETDGRGYIQEAEKQGNDVAETVSPNEHT 240

Query: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVVLQAKGVVEEEKQNDLNEAAAPEDNEA 300
                   XXXXXXXXXXXXXXXXXXXXXXXVVVLQAKGVVEEEKQNDLNEAAAPEDNEA
Sbjct: 241 VATEVNQSXXXXXXXXXXXXXXXXXXXXXXXVVVLQAKGVVEEEKQNDLNEAAAPEDNEA 300

Query: 301 KCNHDVSTNGAAHAEDRSIEDDNLAKENGKL 329
           KCNHDVSTNGAAHAEDR+IED+NLAKENGKL
Sbjct: 301 KCNHDVSTNGAAHAEDRTIEDNNLAKENGKL 327

BLAST of Carg04228 vs. NCBI nr
Match: XP_022998317.1 (methyl-CpG-binding domain-containing protein 11-like [Cucurbita maxima])

HSP 1 Score: 448.4 bits (1152), Expect = 2.2e-122
Identity = 266/328 (81.10%), Postives = 274/328 (83.54%), Query Frame = 0

Query: 1   MENKEEAMLIVEDEAQTKSREGVAAMDEVISVELPAPPTWKKLFIPKRAGTPRKSEIVFI 60
           MENKEEAMLIVEDEAQTKSREGVAAMDEVISVELPAPPTWKKLFIPK+AGTPRKSEIVFI
Sbjct: 1   MENKEEAMLIVEDEAQTKSREGVAAMDEVISVELPAPPTWKKLFIPKKAGTPRKSEIVFI 60

Query: 61  APTGEEIGNRKLLEQYLKLHPGSLAISEFDWSTGEAPRRSVRISEKVKETPXXXXXXXXX 120
           APTGEEIGNRKLLEQYLKLH GS AISEFDWSTGEAPRRSVRISEKVKETPXXXXXXXXX
Sbjct: 61  APTGEEIGNRKLLEQYLKLHSGSPAISEFDWSTGEAPRRSVRISEKVKETPXXXXXXXXX 120

Query: 121 XXXXXXXXXDMKEEADAVPKVPEEVEMKDAEGNDRAGGYVGEAENGQTEHQAATEEMAPE 180
           XXXXXXXXX MKEEADAVP+VPEEVEMKDAEGND+AGGYVGEAENGQTEHQ    EMAPE
Sbjct: 121 XXXXXXXXXXMKEEADAVPEVPEEVEMKDAEGNDKAGGYVGEAENGQTEHQ----EMAPE 180

Query: 181 VKEDEKQVLKGSSDVDVNSEFVGKDETDKNGGETDGRGYIEEAEKXXXXXXXXXXXXXXX 240
            KE EKQVL+GSS+VDVNSEF GKDETDKNGG+TDGRGYI+EAEK               
Sbjct: 181 AKEGEKQVLEGSSEVDVNSEFFGKDETDKNGGKTDGRGYIQEAEKQGNDVAETVSPNEHT 240

Query: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXVVVLQAKGVVEEEKQNDLNEAAAPEDNEAKCN 300
                                       V+VLQAKGVVEEEKQNDLNEAAAPEDNE KCN
Sbjct: 241 VATEVNQSEKETDQENNIPDKDDNDPGNVIVLQAKGVVEEEKQNDLNEAAAPEDNEGKCN 300

Query: 301 HDVSTNGAAHAEDRSIEDDNLAKENGKL 329
           HDVSTNGAAHAEDRSIEDDNLAKENGKL
Sbjct: 301 HDVSTNGAAHAEDRSIEDDNLAKENGKL 324

BLAST of Carg04228 vs. NCBI nr
Match: XP_022153629.1 (methyl-CpG-binding domain-containing protein 10-like isoform X1 [Momordica charantia])

HSP 1 Score: 276.2 bits (705), Expect = 1.5e-70
Identity = 215/414 (51.93%), Postives = 233/414 (56.28%), Query Frame = 0

Query: 1   MENKEEAMLIVEDEAQTKSREGVAAMDEVISVELPAPPTWKKLFIPKRAGTPRKSEIVFI 60
           ME+K E M ++E+EAQT+S  G  AMDE+ISVELPAPPTWKKLFIPK+AGTPRKSEIVFI
Sbjct: 1   MESKAEVM-VLENEAQTES--GGGAMDELISVELPAPPTWKKLFIPKKAGTPRKSEIVFI 60

Query: 61  APTGEEIGNRKLLEQYLKLHPGSLAISEFDWSTGEAPRRSVRISEKVKETPXXXXXXXXX 120
           APTGEE  NRKLLEQYLK HPGS A+SEFDWSTGE PRRS RISEKVK TPXXXXXXXXX
Sbjct: 61  APTGEEFSNRKLLEQYLKSHPGSPAVSEFDWSTGETPRRSARISEKVKATPXXXXXXXXX 120

Query: 121 XXXXXXXXXDMKEEADAVPKVPEEVEMKDAEGN--------------------------- 180
           XXXXXXXXX     ADA PKVPEE+EMKDAEGN                           
Sbjct: 121 XXXXXXXXXXXXXXADAAPKVPEEIEMKDAEGNEEIPVVEEDKDVYNDRQAENGDNLKDE 180

Query: 181 ----------------DRAGGYVGEAENGQTEHQAATEEMAPEVKEDEKQVLKGSSDVDV 240
                           D+ G   GE ENGQTE +AATEE  PEVKE EKQ LK SSD+DV
Sbjct: 181 QKGIEKVDADPEISSKDKMGSDAGETENGQTEAKAATEENVPEVKEGEKQDLKESSDLDV 240

Query: 241 NSEFVGKDETDKNGGETDGRGYI-------EEAEK-------------XXXXXXXXXXXX 300
           N   VG DET KNGG+T+G+  I       EE EK                         
Sbjct: 241 NLGTVGNDETYKNGGKTNGQDTIQEKTEGLEEVEKQGNEVAEIVTPTEETVASEVNQIEK 300

Query: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVVLQAKGVVEEEKQNDLNE-AAAPEDNE 329
                                          VV+ QA GVVEEEKQ+D NE  AA  D E
Sbjct: 301 AVAQTEIEQVNDSPDKKENYSLDKKENDPGTVVIQQANGVVEEEKQSDQNETVAAAPDAE 360

BLAST of Carg04228 vs. NCBI nr
Match: XP_008454229.1 (PREDICTED: methyl-CpG-binding domain-containing protein 11-like [Cucumis melo])

HSP 1 Score: 262.3 bits (669), Expect = 2.2e-66
Identity = 228/385 (59.22%), Postives = 249/385 (64.68%), Query Frame = 0

Query: 1   MENKEEAMLIVEDEAQTKSREGVAAMDEVISVELPAPPTWKKLFIPKRAGTPRKSEIVFI 60
           ME+KEE M++  +EAQ  +    AAMDEVISVELPAPPTWKKLFIP+R+GTPRK+EIVFI
Sbjct: 1   MESKEEVMMVEIEEAQADTG---AAMDEVISVELPAPPTWKKLFIPRRSGTPRKTEIVFI 60

Query: 61  APTGEEIGNRKLLEQYLKLHPGSLAISEFDWSTGEAPRRSVRISEKVKETPXXXXXXXXX 120
           APTGEEIGNRKLLEQYLK HPG  AISEFDWSTGE PRRS RISEKVK TPXXXXXXXXX
Sbjct: 61  APTGEEIGNRKLLEQYLKSHPGGPAISEFDWSTGETPRRSARISEKVKATPXXXXXXXXX 120

Query: 121 XXXXXXXXXDMKEEADAVPKVPEEVEMKDAE----------------------------- 180
           XXXXXXXXX  KEE +A    PEEVEMKDAE                             
Sbjct: 121 XXXXXXXXXXXKEEVNAGVTGPEEVEMKDAEANEKNIPVVEDKDGSDNYQAEDGDNPRGE 180

Query: 181 --------------GNDRAGGYVGEAENGQTEHQAATEEMAPEVKEDEKQVLKGSSDVDV 240
                         G D+ G   GE++NG TE   ATE + P+VKE EKQ  +G SDV V
Sbjct: 181 PKEIEKVDADPDISGKDKTGNDAGESKNGHTEAPEATENV-PQVKEGEKQDHEGGSDVVV 240

Query: 241 NSEFVGKDETDKNGGETDGRGYI-------EEAEK----XXXXXXXXXXXXXXXXXXXXX 300
           NSEFV   ET+K+G ET+G+  I       EEAEK                    XXXXX
Sbjct: 241 NSEFVSMGETNKHGSETNGQDAIQEKTEGLEEAEKQGNEIAEEHITAIASEVNQSXXXXX 300

Query: 301 XXXXXXXXXXXXXXXXXXXXXXVVVLQAKGVVEEEKQNDLNEAAAPEDNEAKCNHDVSTN 329
           XXXXXXXXXXXXXXXXXXXXX V + Q  GVVE +KQND NEA A  DNE K N DVSTN
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXNVGIEQVNGVVEGKKQNDENEATAVPDNEVKGNQDVSTN 360

BLAST of Carg04228 vs. TAIR10
Match: AT1G15340.1 (methyl-CPG-binding domain 10)

HSP 1 Score: 139.4 bits (350), Expect = 3.9e-33
Identity = 63/84 (75.00%), Postives = 74/84 (88.10%), Query Frame = 0

Query: 27  DEVISVELPAPPTWKKLFIPKRAGTPRKSEIVFIAPTGEEIGNRKLLEQYLKLHPGSLAI 86
           DE++S+ELPAP +WKKLF PKRAGTPRK+EIVF+APTGEEI +RK LEQYLK HPG+  I
Sbjct: 5   DELVSIELPAPASWKKLFYPKRAGTPRKTEIVFVAPTGEEISSRKQLEQYLKAHPGNPVI 64

Query: 87  SEFDWSTGEAPRRSVRISEKVKET 111
           SEF+W+TGE PRRS RIS+KVK T
Sbjct: 65  SEFEWTTGETPRRSSRISQKVKAT 88

BLAST of Carg04228 vs. TAIR10
Match: AT3G15790.1 (methyl-CPG-binding domain 11)

HSP 1 Score: 128.6 bits (322), Expect = 6.9e-30
Identity = 79/168 (47.02%), Postives = 95/168 (56.55%), Query Frame = 0

Query: 27  DEVISVELPAPPTWKKLFIPKRAGTPRKSEIVFIAPTGEEIGNRKLLEQYLKLHPGSLAI 86
           +EV+SVELPAP +WKKLF P + G+ +K+E+VF+APTGEEI NRK LEQYLK HPG+ AI
Sbjct: 5   EEVVSVELPAPSSWKKLFYPNKVGSVKKTEVVFVAPTGEEISNRKQLEQYLKSHPGNPAI 64

Query: 87  SEFDWSTGEAPRRSVRISEKVKETPXXXXXXXXXXXXXXXXXXDMKEEADAVPKVPEEVE 146
           +EFDW+T   PRRS RISEK K TP                    KE      +    V 
Sbjct: 65  AEFDWTTSGTPRRSARISEKTKATPSPD-----------------KEPPKKRGRTKSPVS 124

Query: 147 MKDAEGNDRAGGYVGEAENGQTEHQAATEEMAPE-VKEDEKQVLKGSS 194
            KDAEG    GG  GE    +  H   TE   PE + E+E    K  S
Sbjct: 125 KKDAEGEKSEGG--GE----ENSHVKDTEMNPPEGIAENENVTDKNGS 149

BLAST of Carg04228 vs. Swiss-Prot
Match: sp|Q9XI36|MBD10_ARATH (Methyl-CpG-binding domain-containing protein 10 OS=Arabidopsis thaliana OX=3702 GN=MBD10 PE=1 SV=1)

HSP 1 Score: 139.4 bits (350), Expect = 7.0e-32
Identity = 63/84 (75.00%), Postives = 74/84 (88.10%), Query Frame = 0

Query: 27  DEVISVELPAPPTWKKLFIPKRAGTPRKSEIVFIAPTGEEIGNRKLLEQYLKLHPGSLAI 86
           DE++S+ELPAP +WKKLF PKRAGTPRK+EIVF+APTGEEI +RK LEQYLK HPG+  I
Sbjct: 5   DELVSIELPAPASWKKLFYPKRAGTPRKTEIVFVAPTGEEISSRKQLEQYLKAHPGNPVI 64

Query: 87  SEFDWSTGEAPRRSVRISEKVKET 111
           SEF+W+TGE PRRS RIS+KVK T
Sbjct: 65  SEFEWTTGETPRRSSRISQKVKAT 88

BLAST of Carg04228 vs. Swiss-Prot
Match: sp|Q9LW00|MBD11_ARATH (Methyl-CpG-binding domain-containing protein 11 OS=Arabidopsis thaliana OX=3702 GN=MBD11 PE=1 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 1.2e-28
Identity = 79/168 (47.02%), Postives = 95/168 (56.55%), Query Frame = 0

Query: 27  DEVISVELPAPPTWKKLFIPKRAGTPRKSEIVFIAPTGEEIGNRKLLEQYLKLHPGSLAI 86
           +EV+SVELPAP +WKKLF P + G+ +K+E+VF+APTGEEI NRK LEQYLK HPG+ AI
Sbjct: 5   EEVVSVELPAPSSWKKLFYPNKVGSVKKTEVVFVAPTGEEISNRKQLEQYLKSHPGNPAI 64

Query: 87  SEFDWSTGEAPRRSVRISEKVKETPXXXXXXXXXXXXXXXXXXDMKEEADAVPKVPEEVE 146
           +EFDW+T   PRRS RISEK K TP                    KE      +    V 
Sbjct: 65  AEFDWTTSGTPRRSARISEKTKATPSPD-----------------KEPPKKRGRTKSPVS 124

Query: 147 MKDAEGNDRAGGYVGEAENGQTEHQAATEEMAPE-VKEDEKQVLKGSS 194
            KDAEG    GG  GE    +  H   TE   PE + E+E    K  S
Sbjct: 125 KKDAEGEKSEGG--GE----ENSHVKDTEMNPPEGIAENENVTDKNGS 149

BLAST of Carg04228 vs. TrEMBL
Match: tr|A0A1S3BY89|A0A1S3BY89_CUCME (methyl-CpG-binding domain-containing protein 11-like OS=Cucumis melo OX=3656 GN=LOC103494699 PE=4 SV=1)

HSP 1 Score: 262.3 bits (669), Expect = 1.4e-66
Identity = 228/385 (59.22%), Postives = 249/385 (64.68%), Query Frame = 0

Query: 1   MENKEEAMLIVEDEAQTKSREGVAAMDEVISVELPAPPTWKKLFIPKRAGTPRKSEIVFI 60
           ME+KEE M++  +EAQ  +    AAMDEVISVELPAPPTWKKLFIP+R+GTPRK+EIVFI
Sbjct: 1   MESKEEVMMVEIEEAQADTG---AAMDEVISVELPAPPTWKKLFIPRRSGTPRKTEIVFI 60

Query: 61  APTGEEIGNRKLLEQYLKLHPGSLAISEFDWSTGEAPRRSVRISEKVKETPXXXXXXXXX 120
           APTGEEIGNRKLLEQYLK HPG  AISEFDWSTGE PRRS RISEKVK TPXXXXXXXXX
Sbjct: 61  APTGEEIGNRKLLEQYLKSHPGGPAISEFDWSTGETPRRSARISEKVKATPXXXXXXXXX 120

Query: 121 XXXXXXXXXDMKEEADAVPKVPEEVEMKDAE----------------------------- 180
           XXXXXXXXX  KEE +A    PEEVEMKDAE                             
Sbjct: 121 XXXXXXXXXXXKEEVNAGVTGPEEVEMKDAEANEKNIPVVEDKDGSDNYQAEDGDNPRGE 180

Query: 181 --------------GNDRAGGYVGEAENGQTEHQAATEEMAPEVKEDEKQVLKGSSDVDV 240
                         G D+ G   GE++NG TE   ATE + P+VKE EKQ  +G SDV V
Sbjct: 181 PKEIEKVDADPDISGKDKTGNDAGESKNGHTEAPEATENV-PQVKEGEKQDHEGGSDVVV 240

Query: 241 NSEFVGKDETDKNGGETDGRGYI-------EEAEK----XXXXXXXXXXXXXXXXXXXXX 300
           NSEFV   ET+K+G ET+G+  I       EEAEK                    XXXXX
Sbjct: 241 NSEFVSMGETNKHGSETNGQDAIQEKTEGLEEAEKQGNEIAEEHITAIASEVNQSXXXXX 300

Query: 301 XXXXXXXXXXXXXXXXXXXXXXVVVLQAKGVVEEEKQNDLNEAAAPEDNEAKCNHDVSTN 329
           XXXXXXXXXXXXXXXXXXXXX V + Q  GVVE +KQND NEA A  DNE K N DVSTN
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXNVGIEQVNGVVEGKKQNDENEATAVPDNEVKGNQDVSTN 360

BLAST of Carg04228 vs. TrEMBL
Match: tr|A0A0A0KVG4|A0A0A0KVG4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G005520 PE=4 SV=1)

HSP 1 Score: 253.8 bits (647), Expect = 5.2e-64
Identity = 221/382 (57.85%), Postives = 244/382 (63.87%), Query Frame = 0

Query: 1   MENKEEAMLIVEDEAQTKSREGVAAMDEVISVELPAPPTWKKLFIPKRAGTPRKSEIVFI 60
           ME+KE  M++  +EAQ    +  A MDEVISVELPAPPTWKKLFIP+R+GTPRK+EIVFI
Sbjct: 1   MESKEGVMMVEIEEAQA---DIGAVMDEVISVELPAPPTWKKLFIPRRSGTPRKTEIVFI 60

Query: 61  APTGEEIGNRKLLEQYLKLHPGSLAISEFDWSTGEAPRRSVRISEKVKETPXXXXXXXXX 120
           APTGEEIGNRKLLEQYLK HPG  AISEFDWSTGE PRRS RISEKVK TP XXXXXXXX
Sbjct: 61  APTGEEIGNRKLLEQYLKSHPGGPAISEFDWSTGETPRRSARISEKVKATPPXXXXXXXX 120

Query: 121 XXXXXXXXXDMKEEADAVPKVPEEVEMKDAE----------------------------- 180
           XXXXXXXXX    EA+A    PEEVEMKDAE                             
Sbjct: 121 XXXXXXXXXXXXXEANASVTGPEEVEMKDAEANENNIPVXXXXXXXXXXKGEPKEIEKVG 180

Query: 181 ------GNDRAGGYVGEAENGQTEHQAATEEMAPEVKEDEKQVLKGSSDVDVNSEFVGKD 240
                 G D+ G   GE++NG TE   ATE + P+VKE EKQ  +G SDV VNSEFV   
Sbjct: 181 ADPDISGKDKTGNDAGESKNGHTESLEATENI-PQVKEGEKQDHEGGSDVVVNSEFVSMG 240

Query: 241 ETDKNGGETDGRGYI-------EEAEK---------XXXXXXXXXXXXXXXXXXXXXXXX 300
           ET+K+G ET+G+  I       EEAEK                           XXXXXX
Sbjct: 241 ETNKHGSETNGQDAIQEKTEGLEEAEKQENEIAETVTPSEHITAIASEVNQSEKXXXXXX 300

Query: 301 XXXXXXXXXXXXXXXXXXXVVVLQAKGVVEEEKQNDLNEAAAPEDNEAKCNHDVSTNGA- 329
           XXXXXXXXXXXXXXXXXXXV + Q+ GVVE EKQND NEA    DNE K N D+STN A 
Sbjct: 301 XXXXXXXXXXXXXXXXXXXVGIEQSNGVVEGEKQNDQNEATGVSDNEVKGNQDISTNAAK 360

BLAST of Carg04228 vs. TrEMBL
Match: tr|A0A2C9W1H0|A0A2C9W1H0_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_04G113200 PE=4 SV=1)

HSP 1 Score: 154.1 bits (388), Expect = 5.6e-34
Identity = 80/130 (61.54%), Postives = 92/130 (70.77%), Query Frame = 0

Query: 25  AMDEVISVELPAPPTWKKLFIPKRAGTPRKSEIVFIAPTGEEIGNRKLLEQYLKLHPGSL 84
           A +EVISVELPAPP WKK+++PKRAGTPRKSEI+FIAPTGEEI NRK LEQYLK HPG+ 
Sbjct: 3   AKEEVISVELPAPPAWKKMYLPKRAGTPRKSEIMFIAPTGEEINNRKQLEQYLKSHPGNP 62

Query: 85  AISEFDWSTGEAPRRSVRISEKVKETPXXXXXXXXXXXXXXXXXXDMKEEADAVPKVPE- 144
           AISEFDW TGE PRRSVRISEK K TP                     +E ++ P+  E 
Sbjct: 63  AISEFDWGTGETPRRSVRISEKAKATPTPDKEPPKKRGRKSSGSKKDGKEIESTPEKGEG 122

Query: 145 --EVEMKDAE 152
             EV+M+DAE
Sbjct: 123 EKEVQMQDAE 132

BLAST of Carg04228 vs. TrEMBL
Match: tr|A0A067KZ09|A0A067KZ09_JATCU (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_06140 PE=4 SV=1)

HSP 1 Score: 150.6 bits (379), Expect = 6.1e-33
Identity = 70/87 (80.46%), Postives = 76/87 (87.36%), Query Frame = 0

Query: 25  AMDEVISVELPAPPTWKKLFIPKRAGTPRKSEIVFIAPTGEEIGNRKLLEQYLKLHPGSL 84
           A +EVISVELPAPP WKK+++PKRAGTPRKSEI+FIAPTGEEI NRK LEQYLK HPG+ 
Sbjct: 3   AKEEVISVELPAPPAWKKMYLPKRAGTPRKSEIMFIAPTGEEINNRKQLEQYLKSHPGNP 62

Query: 85  AISEFDWSTGEAPRRSVRISEKVKETP 112
           AISEFDW TGE PRRS RISEK K TP
Sbjct: 63  AISEFDWGTGETPRRSARISEKAKATP 89

BLAST of Carg04228 vs. TrEMBL
Match: tr|A0A2G9GU35|A0A2G9GU35_9LAMI (Uncharacterized protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_18891 PE=4 SV=1)

HSP 1 Score: 147.5 bits (371), Expect = 5.2e-32
Identity = 67/85 (78.82%), Postives = 75/85 (88.24%), Query Frame = 0

Query: 27  DEVISVELPAPPTWKKLFIPKRAGTPRKSEIVFIAPTGEEIGNRKLLEQYLKLHPGSLAI 86
           D+V+SVELPAP +WKKL++PKR GTPRK+EI+FIAPTGEEI NRK LEQYLK HPG  A+
Sbjct: 10  DDVVSVELPAPASWKKLYVPKRGGTPRKNEILFIAPTGEEISNRKQLEQYLKAHPGGPAL 69

Query: 87  SEFDWSTGEAPRRSVRISEKVKETP 112
           SEFDWSTGE PRRS RISEKVK TP
Sbjct: 70  SEFDWSTGETPRRSARISEKVKATP 94

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022948683.13.9e-13291.77methyl-CpG-binding domain-containing protein 11-like [Cucurbita moschata][more]
XP_023525889.17.4e-12387.61methyl-CpG-binding domain-containing protein 11-like [Cucurbita pepo subsp. pepo... [more]
XP_022998317.12.2e-12281.10methyl-CpG-binding domain-containing protein 11-like [Cucurbita maxima][more]
XP_022153629.11.5e-7051.93methyl-CpG-binding domain-containing protein 10-like isoform X1 [Momordica chara... [more]
XP_008454229.12.2e-6659.22PREDICTED: methyl-CpG-binding domain-containing protein 11-like [Cucumis melo][more]
Match NameE-valueIdentityDescription
AT1G15340.13.9e-3375.00methyl-CPG-binding domain 10[more]
AT3G15790.16.9e-3047.02methyl-CPG-binding domain 11[more]
Match NameE-valueIdentityDescription
sp|Q9XI36|MBD10_ARATH7.0e-3275.00Methyl-CpG-binding domain-containing protein 10 OS=Arabidopsis thaliana OX=3702 ... [more]
sp|Q9LW00|MBD11_ARATH1.2e-2847.02Methyl-CpG-binding domain-containing protein 11 OS=Arabidopsis thaliana OX=3702 ... [more]
Match NameE-valueIdentityDescription
tr|A0A1S3BY89|A0A1S3BY89_CUCME1.4e-6659.22methyl-CpG-binding domain-containing protein 11-like OS=Cucumis melo OX=3656 GN=... [more]
tr|A0A0A0KVG4|A0A0A0KVG4_CUCSA5.2e-6457.85Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G005520 PE=4 SV=1[more]
tr|A0A2C9W1H0|A0A2C9W1H0_MANES5.6e-3461.54Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_04G113200 PE=4 SV=... [more]
tr|A0A067KZ09|A0A067KZ09_JATCU6.1e-3380.46Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_06140 PE=4 SV=1[more]
tr|A0A2G9GU35|A0A2G9GU35_9LAMI5.2e-3278.82Uncharacterized protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_18891 P... [more]
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
Vocabulary: INTERPRO
TermDefinition
IPR016177DNA-bd_dom_sf
IPR001739Methyl_CpG_DNA-bd
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005634 nucleus
molecular_function GO:0003677 DNA binding

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg04228-RACarg04228-RAmRNA


Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 1..21
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 278..300
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 175..191
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 99..155
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 199..228
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 87..328
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 307..328
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 230..253
NoneNo IPR availablePANTHERPTHR33729FAMILY NOT NAMEDcoord: 26..306
NoneNo IPR availablePANTHERPTHR33729:SF4METHYL-CPG-BINDING DOMAIN-CONTAINING PROTEIN 10-RELATEDcoord: 26..306
IPR001739Methyl-CpG DNA bindingPFAMPF01429MBDcoord: 32..96
e-value: 4.4E-9
score: 35.8
IPR001739Methyl-CpG DNA bindingPROSITEPS50982MBDcoord: 26..96
score: 11.41
IPR016177DNA-binding domain superfamilySUPERFAMILYSSF54171DNA-binding domaincoord: 19..116

The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Carg04228Cla015366Watermelon (97103) v1carwmB0187
Carg04228Csa4G005520Cucumber (Chinese Long) v2carcuB0226
Carg04228Csa7G432540Cucumber (Chinese Long) v2carcuB0229
Carg04228MELO3C017880Melon (DHL92) v3.5.1carmeB0210
Carg04228MELO3C004492Melon (DHL92) v3.5.1carmeB0209
Carg04228MELO3C023419Melon (DHL92) v3.5.1carmeB0198
Carg04228ClCG06G011310Watermelon (Charleston Gray)carwcgB0198
Carg04228ClCG09G002910Watermelon (Charleston Gray)carwcgB0190
Carg04228CSPI04G01610Wild cucumber (PI 183967)carcpiB0233
Carg04228CSPI07G20570Wild cucumber (PI 183967)carcpiB0236
Carg04228Cucsa.105420Cucumber (Gy14) v1carcgyB0238
Carg04228Cucsa.096390Cucumber (Gy14) v1carcgyB0235
Carg04228CmaCh17G008620Cucurbita maxima (Rimu)carcmaB0277
Carg04228CmaCh01G001430Cucurbita maxima (Rimu)carcmaB0278
Carg04228CmaCh08G006180Cucurbita maxima (Rimu)carcmaB0284
Carg04228CmoCh01G001510Cucurbita moschata (Rifu)carcmoB0285
Carg04228CmoCh14G013740Cucurbita moschata (Rifu)carcmoB0283
Carg04228Lsi02G027130Bottle gourd (USVL1VR-Ls)carlsiB176
Carg04228Lsi06G009820Bottle gourd (USVL1VR-Ls)carlsiB181
Carg04228Cp4.1LG03g13750Cucurbita pepo (Zucchini)carcpeB0287
Carg04228Cp4.1LG02g14780Cucurbita pepo (Zucchini)carcpeB0285
Carg04228Cp4.1LG17g08950Cucurbita pepo (Zucchini)carcpeB0283
Carg04228CsGy7G018860Cucumber (Gy14) v2carcgybB0218
Carg04228MELO3C023419.2Melon (DHL92) v3.6.1carmedB0203
Carg04228CsaV3_4G001590Cucumber (Chinese Long) v3carcucB0230
Carg04228CsaV3_7G032420Cucumber (Chinese Long) v3carcucB0233
Carg04228Cla97C06G120480Watermelon (97103) v2carwmbB0204
Carg04228Cla97C07G139410Watermelon (97103) v2carwmbB0205
Carg04228Cla97C09G165060Watermelon (97103) v2carwmbB0209
Carg04228Bhi01G002753Wax gourdcarwgoB0246
Carg04228Bhi09G000020Wax gourdcarwgoB0253
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Carg04228Carg06507Silver-seed gourdcarcarB139