Carg06491 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCCACCAATAGAGTTCATCAACTTCAAATCACTGAGCTCAGATTAGGGCTTCCGGGGACTGCCCATACCCCAACTTCAAAAAATGAGAACAAAAGGGTTTGCTCCAAGAGTAGTACCGACGATGACGACGACGCTGACCGGAGATGCTCGAAGAGAAACCGAGTTGTCGGGTGGCCACCCGTTTGCTCTCACCGAAGAAGGAGTAGTGGTAACGATAGAGATCTATCTGAAACTCAGACTTGGAAGATGTATGTCAAAGTAAGCATGGATGGCGCGCCTTATCTTAGAAAGCTTGATCTTAGAATTCTTAAAGGATATTCCGATCTCGGGGTGGCAATGGAGAATCTATTCGACCGTGCAATCGGATGCTCTGACTATGTTTCGATTTATGAAGATCGAGATGGCGATTGGATGCTCGTCGGAGATGTTCCATGGGGGATGTTTATTGAGTCATGCAAGAGAGTGAGAATAATGAAGAGATCAGAAGCTAAAGGGTCTGATTTTTCTTCAAAACAAGTATGAAAAGTTTTCTTTAAAGTGTATGCACATAATATATATTGATCATACCCTAATTCAAGAAGGAATTGTTAATGTTCTTGTCTAATTTGACAATCCATTGATATGAGTGACAAAAGTAGCAACTTTTCATCCAATTCTCTCCATACTTTGTGTAATAATCGAGTTTTGAATTAGTTGGTGTCGTTTGGAATATTTTTGGTTTGAAACTCGGCACACAAAAATCAATCAATTAAACCAATACTTCATCAACGATCTTGTTTGATAATTTGTATCGAGTCTCTATCAGTGACTCGATCAATCTGAAGTCTCCATCAATCCAAAACGATTTGGATTCAAATTCTAAATACTAATACGGTGGAAATATTAGGGTTAGAGTCTTAGTTACTCTTAGCTTAGCTGCCACTCGATCTATATCCTACCTATAAAGGTGACTATTTATTCAAACGTGATCTCGAATATGATCTCAAAACAAATTAGTAATAAGAGTAGTAACTCATGTATTATATAAACGGTAATGTTTCATATCCATGGTTCATATTAGTATTTGGAATCTGAATACAACACTTAATAACTGCACTGCAGCAATATTCTAATACATCATTGACAACATAATCGCGTTATCTACTTATCTTGAAGTACTTATAATAGTAAAAATTATTCCCGTAGATCAACACATGTCTTTTTAGCCTGTTTTAAGCAAAAGATTTGTTGTTTTATTACTCCTGCTTCTTCACATCTACGCTCGTCAAGCCAACTTAGCTTTTTGGCCGTGTTTGAAGCTAAATTAAAATTTAAAATCTAAATTATAGAAACTTTAAAAGATCTTGAAGAGGAGCTCATCCTCTCTGTCAAAAGGGTCCATCATTCAAAACACGAACACGAATACGAACGCGAACGCGAACACGACAAGAACCAGAGAGGAGGATAGAGAAATGTTCATAATTAAAACAGAACAGTAAACCGTGTGATAGAAGCAACACAATAAGGCAAAATCACATGGGGTTTGTTCAAAAAAGCAAGACAATAATTAATCAAACGGCAGTGATCAAATCCCACCAAAACCTCAAACAATTATCAGCCCTCCGATGTGGTGTCCCACATCTCTTTAAAGAGCTGCCATTGTTTCCTCCACATATATTGATAAATAGCATCATCACATTTCATAATATTCCCAACACAAACCCCAAATCCAAGGAAGACCCAGATGGCAGCTGAGGGATTAGGCCTTGAAATCACCCAGCTCCGGCTAGGACTCCCCGGTGGCGGTCCGATTCCGGCGAGTAAAAACAATGACAACAAAAGGGTTTTCTTGGAGGTGGAAGTAGAAGATCATAAGAGTCACGGCCAGAGGTGGAGCAAGCAGGCAGTAGGGTGGCCGCCCGTGTGCTCATACCGGCGGAGGAACGGCTTGAATTTTATTGCTAATAATGATGATTTTGGTATCTAA ATGGCCACCAATAGAGTTCATCAACTTCAAATCACTGAGCTCAGATTAGGGCTTCCGGGGACTGCCCATACCCCAACTTCAAAAAATGAGAACAAAAGGGTTTGCTCCAAGAGTAGTACCGACGATGACGACGACGCTGACCGGAGATGCTCGAAGAGAAACCGAGTTGTCGGGTGGCCACCCGTTTGCTCTCACCGAAGAAGGAGTAGTGGTAACGATAGAGATCTATCTGAAACTCAGACTTGGAAGATGTATGTCAAAGTAAGCATGGATGGCGCGCCTTATCTTAGAAAGCTTGATCTTAGAATTCTTAAAGGATATTCCGATCTCGGGGTGGCAATGGAGAATCTATTCGACCGTGCAATCGGATGCTCTGACTATGTTTCGATTTATGAAGATCGAGATGGCGATTGGATGCTCGTCGGAGATGTTCCATGGGGGATGTTTATTGAGTCATGCAAGAGAGTGAGAATAATGAAGAGATCAGAAGCTAAAGGGTCTGATTTTTCTTCAAAACAAACCCAGATGGCAGCTGAGGGATTAGGCCTTGAAATCACCCAGCTCCGGCTAGGACTCCCCGGTGGCGGTCCGATTCCGGCGAGTAAAAACAATGACAACAAAAGGGTTTTCTTGGAGGTGGAAGTAGAAGATCATAAGAGTCACGGCCAGAGGTGGAGCAAGCAGGCAGTAGGGTGGCCGCCCGTGTGCTCATACCGGCGGAGGAACGGCTTGAATTTTATTGCTAATAATGATGATTTTGGTATCTAA ATGGCCACCAATAGAGTTCATCAACTTCAAATCACTGAGCTCAGATTAGGGCTTCCGGGGACTGCCCATACCCCAACTTCAAAAAATGAGAACAAAAGGGTTTGCTCCAAGAGTAGTACCGACGATGACGACGACGCTGACCGGAGATGCTCGAAGAGAAACCGAGTTGTCGGGTGGCCACCCGTTTGCTCTCACCGAAGAAGGAGTAGTGGTAACGATAGAGATCTATCTGAAACTCAGACTTGGAAGATGTATGTCAAAGTAAGCATGGATGGCGCGCCTTATCTTAGAAAGCTTGATCTTAGAATTCTTAAAGGATATTCCGATCTCGGGGTGGCAATGGAGAATCTATTCGACCGTGCAATCGGATGCTCTGACTATGTTTCGATTTATGAAGATCGAGATGGCGATTGGATGCTCGTCGGAGATGTTCCATGGGGGATGTTTATTGAGTCATGCAAGAGAGTGAGAATAATGAAGAGATCAGAAGCTAAAGGGTCTGATTTTTCTTCAAAACAAACCCAGATGGCAGCTGAGGGATTAGGCCTTGAAATCACCCAGCTCCGGCTAGGACTCCCCGGTGGCGGTCCGATTCCGGCGAGTAAAAACAATGACAACAAAAGGGTTTTCTTGGAGGTGGAAGTAGAAGATCATAAGAGTCACGGCCAGAGGTGGAGCAAGCAGGCAGTAGGGTGGCCGCCCGTGTGCTCATACCGGCGGAGGAACGGCTTGAATTTTATTGCTAATAATGATGATTTTGGTATCTAA MATNRVHQLQITELRLGLPGTAHTPTSKNENKRVCSKSSTDDDDDADRRCSKRNRVVGWPPVCSHRRRSSGNDRDLSETQTWKMYVKVSMDGAPYLRKLDLRILKGYSDLGVAMENLFDRAIGCSDYVSIYEDRDGDWMLVGDVPWGMFIESCKRVRIMKRSEAKGSDFSSKQTQMAAEGLGLEITQLRLGLPGGGPIPASKNNDNKRVFLEVEVEDHKSHGQRWSKQAVGWPPVCSYRRRNGLNFIANNDDFGI
BLAST of Carg06491 vs. NCBI nr
Match: XP_022956092.1 (auxin-induced protein 22A-like [Cucurbita moschata]) HSP 1 Score: 313.9 bits (803), Expect = 4.9e-82 Identity = 162/173 (93.64%), Postives = 162/173 (93.64%), Query Frame = 0
BLAST of Carg06491 vs. NCBI nr
Match: XP_023526896.1 (auxin-induced protein 22A-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 293.5 bits (750), Expect = 6.9e-76 Identity = 148/173 (85.55%), Postives = 152/173 (87.86%), Query Frame = 0
BLAST of Carg06491 vs. NCBI nr
Match: XP_022980012.1 (auxin-induced protein 22A-like [Cucurbita maxima]) HSP 1 Score: 287.3 bits (734), Expect = 4.9e-74 Identity = 144/172 (83.72%), Postives = 151/172 (87.79%), Query Frame = 0
BLAST of Carg06491 vs. NCBI nr
Match: XP_023525671.1 (auxin-induced protein 22A-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 234.6 bits (597), Expect = 3.8e-58 Identity = 121/187 (64.71%), Postives = 144/187 (77.01%), Query Frame = 0
BLAST of Carg06491 vs. NCBI nr
Match: XP_022998150.1 (auxin-induced protein 22A-like [Cucurbita maxima]) HSP 1 Score: 230.7 bits (587), Expect = 5.5e-57 Identity = 119/187 (63.64%), Postives = 144/187 (77.01%), Query Frame = 0
BLAST of Carg06491 vs. TAIR10
Match: AT3G15540.1 (indole-3-acetic acid inducible 19) HSP 1 Score: 155.6 bits (392), Expect = 4.1e-38 Identity = 87/182 (47.80%), Postives = 110/182 (60.44%), Query Frame = 0
BLAST of Carg06491 vs. TAIR10
Match: AT1G04240.1 (AUX/IAA transcriptional regulator family protein) HSP 1 Score: 153.3 bits (386), Expect = 2.0e-37 Identity = 86/178 (48.31%), Postives = 112/178 (62.92%), Query Frame = 0
BLAST of Carg06491 vs. TAIR10
Match: AT5G43700.1 (AUX/IAA transcriptional regulator family protein) HSP 1 Score: 150.6 bits (379), Expect = 1.3e-36 Identity = 82/170 (48.24%), Postives = 105/170 (61.76%), Query Frame = 0
BLAST of Carg06491 vs. TAIR10
Match: AT1G15580.1 (indole-3-acetic acid inducible 5) HSP 1 Score: 139.4 bits (350), Expect = 3.0e-33 Identity = 79/164 (48.17%), Postives = 102/164 (62.20%), Query Frame = 0
BLAST of Carg06491 vs. TAIR10
Match: AT1G52830.1 (indole-3-acetic acid 6) HSP 1 Score: 133.7 bits (335), Expect = 1.7e-31 Identity = 81/181 (44.75%), Postives = 104/181 (57.46%), Query Frame = 0
BLAST of Carg06491 vs. Swiss-Prot
Match: sp|P32293|AX22A_VIGRR (Auxin-induced protein 22A OS=Vigna radiata var. radiata OX=3916 GN=AUX22A PE=2 SV=1) HSP 1 Score: 163.3 bits (412), Expect = 3.5e-39 Identity = 97/182 (53.30%), Postives = 122/182 (67.03%), Query Frame = 0
BLAST of Carg06491 vs. Swiss-Prot
Match: sp|P13088|AUX22_SOYBN (Auxin-induced protein AUX22 OS=Glycine max OX=3847 GN=AUX22 PE=2 SV=1) HSP 1 Score: 162.5 bits (410), Expect = 6.0e-39 Identity = 91/186 (48.92%), Postives = 115/186 (61.83%), Query Frame = 0
BLAST of Carg06491 vs. Swiss-Prot
Match: sp|P49680|IAA6_PEA (Auxin-induced protein IAA6 OS=Pisum sativum OX=3888 GN=IAA6 PE=2 SV=1) HSP 1 Score: 160.2 bits (404), Expect = 3.0e-38 Identity = 91/177 (51.41%), Postives = 112/177 (63.28%), Query Frame = 0
BLAST of Carg06491 vs. Swiss-Prot
Match: sp|O24409|IAA19_ARATH (Auxin-responsive protein IAA19 OS=Arabidopsis thaliana OX=3702 GN=IAA19 PE=1 SV=2) HSP 1 Score: 155.6 bits (392), Expect = 7.3e-37 Identity = 87/182 (47.80%), Postives = 110/182 (60.44%), Query Frame = 0
BLAST of Carg06491 vs. Swiss-Prot
Match: sp|Q38822|IAA3_ARATH (Auxin-responsive protein IAA3 OS=Arabidopsis thaliana OX=3702 GN=IAA3 PE=1 SV=1) HSP 1 Score: 153.3 bits (386), Expect = 3.6e-36 Identity = 86/178 (48.31%), Postives = 112/178 (62.92%), Query Frame = 0
BLAST of Carg06491 vs. TrEMBL
Match: tr|A0A0A0L852|A0A0A0L852_CUCSA (Auxin-responsive protein OS=Cucumis sativus OX=3659 GN=Csa_3G516540 PE=3 SV=1) HSP 1 Score: 227.6 bits (579), Expect = 3.1e-56 Identity = 116/170 (68.24%), Postives = 134/170 (78.82%), Query Frame = 0
BLAST of Carg06491 vs. TrEMBL
Match: tr|A0A2P4LMX6|A0A2P4LMX6_QUESU (Auxin-responsive protein OS=Quercus suber OX=58331 GN=CFP56_59336 PE=3 SV=1) HSP 1 Score: 177.6 bits (449), Expect = 3.7e-41 Identity = 97/175 (55.43%), Postives = 117/175 (66.86%), Query Frame = 0
BLAST of Carg06491 vs. TrEMBL
Match: tr|A0A2C9UYB7|A0A2C9UYB7_MANES (Auxin-responsive protein OS=Manihot esculenta OX=3983 GN=MANES_11G051300 PE=3 SV=1) HSP 1 Score: 177.2 bits (448), Expect = 4.8e-41 Identity = 98/175 (56.00%), Postives = 117/175 (66.86%), Query Frame = 0
BLAST of Carg06491 vs. TrEMBL
Match: tr|A0A1U8MWE6|A0A1U8MWE6_GOSHI (Auxin-responsive protein OS=Gossypium hirsutum OX=3635 GN=LOC107940950 PE=3 SV=1) HSP 1 Score: 176.0 bits (445), Expect = 1.1e-40 Identity = 96/178 (53.93%), Postives = 122/178 (68.54%), Query Frame = 0
BLAST of Carg06491 vs. TrEMBL
Match: tr|A0A1U8JFE7|A0A1U8JFE7_GOSHI (Auxin-responsive protein OS=Gossypium hirsutum OX=3635 GN=LOC107906499 PE=3 SV=1) HSP 1 Score: 176.0 bits (445), Expect = 1.1e-40 Identity = 96/178 (53.93%), Postives = 121/178 (67.98%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
|