Carg06477 (gene) Silver-seed gourd

Overview
NameCarg06477
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionDynein light chain
LocationCucurbita_argyrosperma_scaffold_051 : 755095 .. 755667 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTGGAAGGGAAAGCTTTGATTGCTGATACAGACATGCCTCTCAAGTTGCAGATCCAAGCCATGAAAGCTGCTTCTGAAGCTCTCGATCTTTATGATGTTTTTGACTCTAAATCCATTGCTGCCCACATCAAGAAGGTCATTTATATTCGATTTTCGATGTCGGTATTATGTGAAATTGTCTACTTCTGAGCTGAGTTCTATCACTAAAGTTGAGCGAGAACTTGGTTTGATCTTCCATTCATGGTTTTGTGGATTTGTTTGTGTAAATGATGGTTCAATTTTTGTGCAGAAGTTTGATGATGGGCATGGGATGGGATGGCAATGCGTGGTGGGTTCCAATTTTGGGAGCTTTTTCACTCATTCTCAAGGGACTTTCATCTACTTCACTTTGGAGACTCTCAACTTTCTTATCTTCAAAGGCCCTTCTCCTTCCGTATCGAGTCGCGTAGATATCGTTTGATTTTCTTATTTTAGTTTCTAAAAACTGAGCTTTTTTGTGATCAAACAATATCATACCACTGTATAGAGATACGTGAAAGATCTAACCATGTTGATAGAATTATCTAGTGT

mRNA sequence

ATGCTGGAAGGGAAAGCTTTGATTGCTGATACAGACATGCCTCTCAAGTTGCAGATCCAAGCCATGAAAGCTGCTTCTGAAGCTCTCGATCTTTATGATGTTTTTGACTCTAAATCCATTGCTGCCCACATCAAGAAGAAGTTTGATGATGGGCATGGGATGGGATGGCAATGCGTGGTGGGTTCCAATTTTGGGAGCTTTTTCACTCATTCTCAAGGGACTTTCATCTACTTCACTTTGGAGACTCTCAACTTTCTTATCTTCAAAGGCCCTTCTCCTTCCGTATCGAGTCGCGTAGATATCGTTTGATTTTCTTATTTTAGTTTCTAAAAACTGAGCTTTTTTGTGATCAAACAATATCATACCACTGTATAGAGATACGTGAAAGATCTAACCATGTTGATAGAATTATCTAGTGT

Coding sequence (CDS)

ATGCTGGAAGGGAAAGCTTTGATTGCTGATACAGACATGCCTCTCAAGTTGCAGATCCAAGCCATGAAAGCTGCTTCTGAAGCTCTCGATCTTTATGATGTTTTTGACTCTAAATCCATTGCTGCCCACATCAAGAAGAAGTTTGATGATGGGCATGGGATGGGATGGCAATGCGTGGTGGGTTCCAATTTTGGGAGCTTTTTCACTCATTCTCAAGGGACTTTCATCTACTTCACTTTGGAGACTCTCAACTTTCTTATCTTCAAAGGCCCTTCTCCTTCCGTATCGAGTCGCGTAGATATCGTTTGA

Protein sequence

MLEGKALIADTDMPLKLQIQAMKAASEALDLYDVFDSKSIAAHIKKKFDDGHGMGWQCVVGSNFGSFFTHSQGTFIYFTLETLNFLIFKGPSPSVSSRVDIV
Homology
[Close]
BLAST of Carg06477 vs. NCBI nr
Match: XP_022955724.1 (dynein light chain 1, cytoplasmic-like [Cucurbita moschata])

HSP 1 Score: 204.9 bits (520), Expect = 1.3e-49
Identity = 101/102 (99.02%), Postives = 102/102 (100.00%), Query Frame = 0 

Query: 1   MLEGKALIADTDMPLKLQIQAMKAASEALDLYDVFDSKSIAAHIKKKFDDGHGMGWQCVV 60
           MLEGKALIADTDMPLKLQIQAMKAASEALDLYDVFDSKSIAAHIKKKFDDGHGMGWQCVV
Sbjct: 1   MLEGKALIADTDMPLKLQIQAMKAASEALDLYDVFDSKSIAAHIKKKFDDGHGMGWQCVV 60

Query: 61  GSNFGSFFTHSQGTFIYFTLETLNFLIFKGPSPSVSSRVDIV 103
           GSNFGSFFTHSQGTFIYFTLETLNFLIFKGPSPS+SSRVDIV
Sbjct: 61  GSNFGSFFTHSQGTFIYFTLETLNFLIFKGPSPSISSRVDIV 102

[Close]
BLAST of Carg06477 vs. NCBI nr
Match: XP_023529016.1 (dynein light chain 1, cytoplasmic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 204.1 bits (518), Expect = 2.2e-49
Identity = 101/102 (99.02%), Postives = 102/102 (100.00%), Query Frame = 0 

Query: 1   MLEGKALIADTDMPLKLQIQAMKAASEALDLYDVFDSKSIAAHIKKKFDDGHGMGWQCVV 60
           MLEGKALIADTDMPLKLQIQAMKAASEALDLYDV+DSKSIAAHIKKKFDDGHGMGWQCVV
Sbjct: 1   MLEGKALIADTDMPLKLQIQAMKAASEALDLYDVYDSKSIAAHIKKKFDDGHGMGWQCVV 60

Query: 61  GSNFGSFFTHSQGTFIYFTLETLNFLIFKGPSPSVSSRVDIV 103
           GSNFGSFFTHSQGTFIYFTLETLNFLIFKGPSPSVSSRVDIV
Sbjct: 61  GSNFGSFFTHSQGTFIYFTLETLNFLIFKGPSPSVSSRVDIV 102

[Close]
BLAST of Carg06477 vs. NCBI nr
Match: XP_010098076.1 (dynein light chain 1, cytoplasmic [Morus notabilis] >EXB74513.1 Dynein light chain 1 [Morus notabilis])

HSP 1 Score: 157.5 bits (397), Expect = 2.4e-35
Identity = 77/97 (79.38%), Postives = 87/97 (89.69%), Query Frame = 0 

Query: 1  MLEGKALIADTDMPLKLQIQAMKAASEALDLYDVFDSKSIAAHIKKKFDDGHGMGWQCVV 60
          MLEGKALI DTDMP+K+QIQAM AAS+ALD+YDVFD +SIAAHIKK+FD  +G GWQCVV
Sbjct: 1  MLEGKALIEDTDMPVKMQIQAMAAASQALDIYDVFDCRSIAAHIKKEFDKRYGPGWQCVV 60

Query: 61 GSNFGSFFTHSQGTFIYFTLETLNFLIFKGPSPSVSS 98
          GSNFG FFTHS+GTFIYFTLETL+FLIFKG + S SS
Sbjct: 61 GSNFGCFFTHSKGTFIYFTLETLSFLIFKGATSSSSS 97

[Close]
BLAST of Carg06477 vs. NCBI nr
Match: XP_012856330.1 (PREDICTED: dynein light chain LC6, flagellar outer arm-like [Erythranthe guttata] >EYU21460.1 hypothetical protein MIMGU_mgv1a017027mg [Erythranthe guttata])

HSP 1 Score: 156.8 bits (395), Expect = 4.0e-35
Identity = 78/96 (81.25%), Postives = 84/96 (87.50%), Query Frame = 0 

Query: 1  MLEGKALIADTDMPLKLQIQAMKAASEALDLYDVFDSKSIAAHIKKKFDDGHGMGWQCVV 60
          MLEGKALI DTDMPLK+QIQAM  AS+ALDLYDV D KSIAAHIKK+FD  +G GWQCVV
Sbjct: 1  MLEGKALIEDTDMPLKMQIQAMGCASQALDLYDVLDCKSIAAHIKKEFDKKYGSGWQCVV 60

Query: 61 GSNFGSFFTHSQGTFIYFTLETLNFLIFKGPSPSVS 97
          GSNFG FFTHS+G+FIYFTLETLNFLIFKG S S S
Sbjct: 61 GSNFGCFFTHSKGSFIYFTLETLNFLIFKGSSSSSS 96

[Close]
BLAST of Carg06477 vs. NCBI nr
Match: XP_010254095.1 (PREDICTED: dynein light chain 1, cytoplasmic-like [Nelumbo nucifera])

HSP 1 Score: 156.8 bits (395), Expect = 4.0e-35
Identity = 78/98 (79.59%), Postives = 86/98 (87.76%), Query Frame = 0 

Query: 1  MLEGKALIADTDMPLKLQIQAMKAASEALDLYDVFDSKSIAAHIKKKFDDGHGMGWQCVV 60
          MLEGKALI DTDMP+K+QIQAM +AS+ALDLYDVFD KSIAAHIKK+FD  +G GWQCVV
Sbjct: 1  MLEGKALIEDTDMPVKMQIQAMSSASQALDLYDVFDCKSIAAHIKKEFDTTYGSGWQCVV 60

Query: 61 GSNFGSFFTHSQGTFIYFTLETLNFLIFKGPS--PSVS 97
          GSNFG FFTHSQGTFIYF LETL FLIFKG S  P++S
Sbjct: 61 GSNFGCFFTHSQGTFIYFALETLKFLIFKGASSAPAIS 98

[Close]
BLAST of Carg06477 vs. TAIR10
Match: AT3G16120.1 (Dynein light chain type 1 family protein)

HSP 1 Score: 143.7 bits (361), Expect = 6.4e-35
Identity = 68/90 (75.56%), Postives = 81/90 (90.00%), Query Frame = 0 

Query: 1  MLEGKALIADTDMPLKLQIQAMKAASEALDLYDVFDSKSIAAHIKKKFDDGHGMGWQCVV 60
          MLEGKA + +TDMP+K+Q+QAMK AS++LDL+DVFDS SIAAHIKK+FD+ +G GWQCVV
Sbjct: 1  MLEGKAKVEETDMPVKMQMQAMKIASQSLDLFDVFDSISIAAHIKKEFDERYGSGWQCVV 60

Query: 61 GSNFGSFFTHSQGTFIYFTLETLNFLIFKG 91
          G+NFG FFTHS+GTFIYF L TLNFLIFKG
Sbjct: 61 GTNFGCFFTHSKGTFIYFHLGTLNFLIFKG 90

[Close]
BLAST of Carg06477 vs. TAIR10
Match: AT4G27360.1 (Dynein light chain type 1 family protein)

HSP 1 Score: 100.1 bits (248), Expect = 8.1e-22
Identity = 47/90 (52.22%), Postives = 65/90 (72.22%), Query Frame = 0 

Query: 1  MLEGKALIADTDMPLKLQIQAMKAASEALDLYDVFDSKSIAAHIKKKFDDGHGMGWQCVV 60
          MLEGKA++ DTDM   ++  A+  AS+ALD +DV +   IA  IKK+FD  +G GWQC+V
Sbjct: 1  MLEGKAVMGDTDMKQTMKEDALSLASKALDCFDVTEPTQIARFIKKEFDRSYGSGWQCIV 60

Query: 61 GSNFGSFFTHSQGTFIYFTLETLNFLIFKG 91
          G++FGSF TH  G FI+F++ +L  L+FKG
Sbjct: 61 GTHFGSFVTHCSGCFIHFSVGSLTILLFKG 90

[Close]
BLAST of Carg06477 vs. TAIR10
Match: AT1G52240.1 (RHO guanyl-nucleotide exchange factor 11)

HSP 1 Score: 91.7 bits (226), Expect = 2.9e-19
Identity = 41/59 (69.49%), Postives = 52/59 (88.14%), Query Frame = 0 

Query: 1  MLEGKALIADTDMPLKLQIQAMKAASEALDLYDVFDSKSIAAHIKKKFDDGHGMGWQCV 60
          MLEGKA++ D+DMP+K+Q+QAM  AS+ALDL+DVFD KSIA HIKK+FD+ +G GWQCV
Sbjct: 1  MLEGKAMVEDSDMPVKMQMQAMAFASQALDLFDVFDCKSIAGHIKKEFDERYGSGWQCV 59

[Close]
BLAST of Carg06477 vs. TAIR10
Match: AT5G20110.1 (Dynein light chain type 1 family protein)

HSP 1 Score: 83.2 bits (204), Expect = 1.0e-16
Identity = 40/82 (48.78%), Postives = 54/82 (65.85%), Query Frame = 0 

Query: 8   IADTDMPLKLQIQAMKAASEALDLYDVFDSKSIAAHIKKKFDDGHGMGWQCVVGSNFGSF 67
           I   DMP  +Q  A + A   LD  + F SK +A ++KK+FD G+G  W C+VGS+FGSF
Sbjct: 119 ILAADMPGFMQAHAFRCARMTLDSLEKFSSKHMAFNLKKEFDKGYGPAWHCIVGSSFGSF 178

Query: 68  FTHSQGTFIYFTLETLNFLIFK 90
            THS G FIYF+++ L  L+FK
Sbjct: 179 VTHSTGCFIYFSMDKLYVLLFK 200

[Close]
BLAST of Carg06477 vs. TAIR10
Match: AT4G15930.1 (Dynein light chain type 1 family protein)

HSP 1 Score: 71.6 bits (174), Expect = 3.1e-13
Identity = 37/85 (43.53%), Postives = 51/85 (60.00%), Query Frame = 0 

Query: 5   KALIADTDMPLKLQIQAMKAASEALDLYDVFDSKSIAAHIKKKFDDGHGMGWQCVVGSNF 64
           +A+I   DM   +Q +A++ A  A + Y V   K IA +IKK+FD  HG  W C+VG NF
Sbjct: 39  RAVIKSADMKDDMQKEAIEIAISAFEKYSV--EKDIAENIKKEFDKKHGATWHCIVGRNF 98

Query: 65  GSFFTHSQGTFIYFTLETLNFLIFK 90
           GS+ TH    F+YF L+    L+FK
Sbjct: 99  GSYVTHETNHFVYFYLDQKAVLLFK 121

[Close]
BLAST of Carg06477 vs. Swiss-Prot
Match: sp|P61285|DYL1_BOVIN (Dynein light chain 1, cytoplasmic OS=Bos taurus OX=9913 GN=DYNLL1 PE=1 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 1.7e-13
Identity = 39/89 (43.82%), Postives = 58/89 (65.17%), Query Frame = 0 

Query: 1  MLEGKALIADTDMPLKLQIQAMKAASEALDLYDVFDSKSIAAHIKKKFDDGHGMGWQCVV 60
          M + KA+I + DM  ++Q  +++ A++AL+ Y++   K IAAHIKK+FD  +   W C+V
Sbjct: 1  MCDRKAVIKNADMSEEMQQDSVECATQALEKYNI--EKDIAAHIKKEFDKKYNPTWHCIV 60

Query: 61 GSNFGSFFTHSQGTFIYFTLETLNFLIFK 90
          G NFGS+ TH    FIYF L  +  L+FK
Sbjct: 61 GRNFGSYVTHETKHFIYFYLGQVAILLFK 87

[Close]
BLAST of Carg06477 vs. Swiss-Prot
Match: sp|P63167|DYL1_HUMAN (Dynein light chain 1, cytoplasmic OS=Homo sapiens OX=9606 GN=DYNLL1 PE=1 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 1.7e-13
Identity = 39/89 (43.82%), Postives = 58/89 (65.17%), Query Frame = 0 

Query: 1  MLEGKALIADTDMPLKLQIQAMKAASEALDLYDVFDSKSIAAHIKKKFDDGHGMGWQCVV 60
          M + KA+I + DM  ++Q  +++ A++AL+ Y++   K IAAHIKK+FD  +   W C+V
Sbjct: 1  MCDRKAVIKNADMSEEMQQDSVECATQALEKYNI--EKDIAAHIKKEFDKKYNPTWHCIV 60

Query: 61 GSNFGSFFTHSQGTFIYFTLETLNFLIFK 90
          G NFGS+ TH    FIYF L  +  L+FK
Sbjct: 61 GRNFGSYVTHETKHFIYFYLGQVAILLFK 87

[Close]
BLAST of Carg06477 vs. Swiss-Prot
Match: sp|P61273|DYL1_MACFA (Dynein light chain 1, cytoplasmic OS=Macaca fascicularis OX=9541 GN=DYNLL1 PE=3 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 1.7e-13
Identity = 39/89 (43.82%), Postives = 58/89 (65.17%), Query Frame = 0 

Query: 1  MLEGKALIADTDMPLKLQIQAMKAASEALDLYDVFDSKSIAAHIKKKFDDGHGMGWQCVV 60
          M + KA+I + DM  ++Q  +++ A++AL+ Y++   K IAAHIKK+FD  +   W C+V
Sbjct: 1  MCDRKAVIKNADMSEEMQQDSVECATQALEKYNI--EKDIAAHIKKEFDKKYNPTWHCIV 60

Query: 61 GSNFGSFFTHSQGTFIYFTLETLNFLIFK 90
          G NFGS+ TH    FIYF L  +  L+FK
Sbjct: 61 GRNFGSYVTHETKHFIYFYLGQVAILLFK 87

[Close]
BLAST of Carg06477 vs. Swiss-Prot
Match: sp|P63168|DYL1_MOUSE (Dynein light chain 1, cytoplasmic OS=Mus musculus OX=10090 GN=Dynll1 PE=1 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 1.7e-13
Identity = 39/89 (43.82%), Postives = 58/89 (65.17%), Query Frame = 0 

Query: 1  MLEGKALIADTDMPLKLQIQAMKAASEALDLYDVFDSKSIAAHIKKKFDDGHGMGWQCVV 60
          M + KA+I + DM  ++Q  +++ A++AL+ Y++   K IAAHIKK+FD  +   W C+V
Sbjct: 1  MCDRKAVIKNADMSEEMQQDSVECATQALEKYNI--EKDIAAHIKKEFDKKYNPTWHCIV 60

Query: 61 GSNFGSFFTHSQGTFIYFTLETLNFLIFK 90
          G NFGS+ TH    FIYF L  +  L+FK
Sbjct: 61 GRNFGSYVTHETKHFIYFYLGQVAILLFK 87

[Close]
BLAST of Carg06477 vs. Swiss-Prot
Match: sp|P63169|DYL1_RABIT (Dynein light chain 1, cytoplasmic OS=Oryctolagus cuniculus OX=9986 GN=DYNLL1 PE=1 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 1.7e-13
Identity = 39/89 (43.82%), Postives = 58/89 (65.17%), Query Frame = 0 

Query: 1  MLEGKALIADTDMPLKLQIQAMKAASEALDLYDVFDSKSIAAHIKKKFDDGHGMGWQCVV 60
          M + KA+I + DM  ++Q  +++ A++AL+ Y++   K IAAHIKK+FD  +   W C+V
Sbjct: 1  MCDRKAVIKNADMSEEMQQDSVECATQALEKYNI--EKDIAAHIKKEFDKKYNPTWHCIV 60

Query: 61 GSNFGSFFTHSQGTFIYFTLETLNFLIFK 90
          G NFGS+ TH    FIYF L  +  L+FK
Sbjct: 61 GRNFGSYVTHETKHFIYFYLGQVAILLFK 87

[Close]
BLAST of Carg06477 vs. TrEMBL
Match: tr|W9RUV7|W9RUV7_9ROSA (Dynein light chain OS=Morus notabilis OX=981085 GN=L484_026208 PE=3 SV=1)

HSP 1 Score: 157.5 bits (397), Expect = 1.6e-35
Identity = 77/97 (79.38%), Postives = 87/97 (89.69%), Query Frame = 0 

Query: 1  MLEGKALIADTDMPLKLQIQAMKAASEALDLYDVFDSKSIAAHIKKKFDDGHGMGWQCVV 60
          MLEGKALI DTDMP+K+QIQAM AAS+ALD+YDVFD +SIAAHIKK+FD  +G GWQCVV
Sbjct: 1  MLEGKALIEDTDMPVKMQIQAMAAASQALDIYDVFDCRSIAAHIKKEFDKRYGPGWQCVV 60

Query: 61 GSNFGSFFTHSQGTFIYFTLETLNFLIFKGPSPSVSS 98
          GSNFG FFTHS+GTFIYFTLETL+FLIFKG + S SS
Sbjct: 61 GSNFGCFFTHSKGTFIYFTLETLSFLIFKGATSSSSS 97

[Close]
BLAST of Carg06477 vs. TrEMBL
Match: tr|A0A1U7ZJG1|A0A1U7ZJG1_NELNU (Dynein light chain OS=Nelumbo nucifera OX=4432 GN=LOC104595179 PE=3 SV=1)

HSP 1 Score: 156.8 bits (395), Expect = 2.7e-35
Identity = 78/98 (79.59%), Postives = 86/98 (87.76%), Query Frame = 0 

Query: 1  MLEGKALIADTDMPLKLQIQAMKAASEALDLYDVFDSKSIAAHIKKKFDDGHGMGWQCVV 60
          MLEGKALI DTDMP+K+QIQAM +AS+ALDLYDVFD KSIAAHIKK+FD  +G GWQCVV
Sbjct: 1  MLEGKALIEDTDMPVKMQIQAMSSASQALDLYDVFDCKSIAAHIKKEFDTTYGSGWQCVV 60

Query: 61 GSNFGSFFTHSQGTFIYFTLETLNFLIFKGPS--PSVS 97
          GSNFG FFTHSQGTFIYF LETL FLIFKG S  P++S
Sbjct: 61 GSNFGCFFTHSQGTFIYFALETLKFLIFKGASSAPAIS 98

[Close]
BLAST of Carg06477 vs. TrEMBL
Match: tr|A0A022Q4N8|A0A022Q4N8_ERYGU (Dynein light chain OS=Erythranthe guttata OX=4155 GN=MIMGU_mgv1a017027mg PE=3 SV=1)

HSP 1 Score: 156.8 bits (395), Expect = 2.7e-35
Identity = 78/96 (81.25%), Postives = 84/96 (87.50%), Query Frame = 0 

Query: 1  MLEGKALIADTDMPLKLQIQAMKAASEALDLYDVFDSKSIAAHIKKKFDDGHGMGWQCVV 60
          MLEGKALI DTDMPLK+QIQAM  AS+ALDLYDV D KSIAAHIKK+FD  +G GWQCVV
Sbjct: 1  MLEGKALIEDTDMPLKMQIQAMGCASQALDLYDVLDCKSIAAHIKKEFDKKYGSGWQCVV 60

Query: 61 GSNFGSFFTHSQGTFIYFTLETLNFLIFKGPSPSVS 97
          GSNFG FFTHS+G+FIYFTLETLNFLIFKG S S S
Sbjct: 61 GSNFGCFFTHSKGSFIYFTLETLNFLIFKGSSSSSS 96

[Close]
BLAST of Carg06477 vs. TrEMBL
Match: tr|A0A2P5AC05|A0A2P5AC05_PARAD (Dynein light chain OS=Parasponia andersonii OX=3476 GN=PanWU01x14_347380 PE=3 SV=1)

HSP 1 Score: 156.0 bits (393), Expect = 4.5e-35
Identity = 76/96 (79.17%), Postives = 86/96 (89.58%), Query Frame = 0 

Query: 1  MLEGKALIADTDMPLKLQIQAMKAASEALDLYDVFDSKSIAAHIKKKFDDGHGMGWQCVV 60
          MLEGKALI DTDMP+K+QIQAM AAS+ALD+YDVFD +SIAAHIKK+FD  +G GWQCVV
Sbjct: 1  MLEGKALIEDTDMPVKMQIQAMAAASQALDIYDVFDCRSIAAHIKKEFDKRYGCGWQCVV 60

Query: 61 GSNFGSFFTHSQGTFIYFTLETLNFLIFKGPSPSVS 97
          GSNFG FFTHS+G+FIYFTLETL+FLIFKG S S S
Sbjct: 61 GSNFGCFFTHSKGSFIYFTLETLSFLIFKGASSSSS 96

[Close]
BLAST of Carg06477 vs. TrEMBL
Match: tr|A0A2P5ESB4|A0A2P5ESB4_9ROSA (Dynein light chain OS=Trema orientalis OX=63057 GN=TorRG33x02_158030 PE=3 SV=1)

HSP 1 Score: 154.8 bits (390), Expect = 1.0e-34
Identity = 75/96 (78.12%), Postives = 86/96 (89.58%), Query Frame = 0 

Query: 1  MLEGKALIADTDMPLKLQIQAMKAASEALDLYDVFDSKSIAAHIKKKFDDGHGMGWQCVV 60
          MLEGKALI DTDMP+K+QIQAM AAS+ALD+YDVFD +SIAAHIKK+FD  +G GWQCVV
Sbjct: 1  MLEGKALIEDTDMPVKMQIQAMAAASQALDIYDVFDCRSIAAHIKKEFDKRYGCGWQCVV 60

Query: 61 GSNFGSFFTHSQGTFIYFTLETLNFLIFKGPSPSVS 97
          GSNFG FFTHS+G+FIYFTLETL+FLIFKG + S S
Sbjct: 61 GSNFGCFFTHSKGSFIYFTLETLSFLIFKGAASSSS 96

The following BLAST results are available for this feature:
BLAST of Carg06477 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022955724.11.3e-4999.02dynein light chain 1, cytoplasmic-like [Cucurbita moschata][more]
XP_023529016.12.2e-4999.02dynein light chain 1, cytoplasmic-like [Cucurbita pepo subsp. pepo][more]
XP_010098076.12.4e-3579.38dynein light chain 1, cytoplasmic [Morus notabilis] >EXB74513.1 Dynein light cha... [more]
XP_012856330.14.0e-3581.25PREDICTED: dynein light chain LC6, flagellar outer arm-like [Erythranthe guttata... [more]
XP_010254095.14.0e-3579.59PREDICTED: dynein light chain 1, cytoplasmic-like [Nelumbo nucifera][more]
BLAST of Carg06477 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G16120.16.4e-3575.56Dynein light chain type 1 family protein[more]
AT4G27360.18.1e-2252.22Dynein light chain type 1 family protein[more]
AT1G52240.12.9e-1969.49RHO guanyl-nucleotide exchange factor 11[more]
AT5G20110.11.0e-1648.78Dynein light chain type 1 family protein[more]
AT4G15930.13.1e-1343.53Dynein light chain type 1 family protein[more]
BLAST of Carg06477 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|P61285|DYL1_BOVIN1.7e-1343.82Dynein light chain 1, cytoplasmic OS=Bos taurus OX=9913 GN=DYNLL1 PE=1 SV=1[more]
sp|P63167|DYL1_HUMAN1.7e-1343.82Dynein light chain 1, cytoplasmic OS=Homo sapiens OX=9606 GN=DYNLL1 PE=1 SV=1[more]
sp|P61273|DYL1_MACFA1.7e-1343.82Dynein light chain 1, cytoplasmic OS=Macaca fascicularis OX=9541 GN=DYNLL1 PE=3 ... [more]
sp|P63168|DYL1_MOUSE1.7e-1343.82Dynein light chain 1, cytoplasmic OS=Mus musculus OX=10090 GN=Dynll1 PE=1 SV=1[more]
sp|P63169|DYL1_RABIT1.7e-1343.82Dynein light chain 1, cytoplasmic OS=Oryctolagus cuniculus OX=9986 GN=DYNLL1 PE=... [more]
BLAST of Carg06477 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|W9RUV7|W9RUV7_9ROSA1.6e-3579.38Dynein light chain OS=Morus notabilis OX=981085 GN=L484_026208 PE=3 SV=1[more]
tr|A0A1U7ZJG1|A0A1U7ZJG1_NELNU2.7e-3579.59Dynein light chain OS=Nelumbo nucifera OX=4432 GN=LOC104595179 PE=3 SV=1[more]
tr|A0A022Q4N8|A0A022Q4N8_ERYGU2.7e-3581.25Dynein light chain OS=Erythranthe guttata OX=4155 GN=MIMGU_mgv1a017027mg PE=3 SV... [more]
tr|A0A2P5AC05|A0A2P5AC05_PARAD4.5e-3579.17Dynein light chain OS=Parasponia andersonii OX=3476 GN=PanWU01x14_347380 PE=3 SV... [more]
tr|A0A2P5ESB4|A0A2P5ESB4_9ROSA1.0e-3478.13Dynein light chain OS=Trema orientalis OX=63057 GN=TorRG33x02_158030 PE=3 SV=1[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0007017microtubule-based process
Vocabulary: Cellular Component
TermDefinition
GO:0030286dynein complex
Vocabulary: INTERPRO
TermDefinition
IPR037177DLC_sf
IPR001372Dynein_light_chain_typ-1/2
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007017 microtubule-based process
cellular_component GO:0030286 dynein complex
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg06477-RACarg06477-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001372Dynein light chain, type 1/2SMARTSM01375Dynein_light_2coord: 1..90
e-value: 7.4E-35
score: 131.8
IPR001372Dynein light chain, type 1/2PFAMPF01221Dynein_lightcoord: 5..89
e-value: 1.1E-27
score: 96.0
IPR001372Dynein light chain, type 1/2PANTHERPTHR11886DYNEIN LIGHT CHAINcoord: 1..91
IPR037177Dynein light chain superfamilyGENE3DG3DSA:3.30.740.10coord: 1..90
e-value: 6.8E-28
score: 98.6
IPR037177Dynein light chain superfamilySUPERFAMILYSSF54648DLCcoord: 1..91
NoneNo IPR availablePANTHERPTHR11886:SF47SUBFAMILY NOT NAMEDcoord: 1..91

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Carg06477Cla015447Watermelon (97103) v1carwmB0117
Carg06477Csa3G851720Cucumber (Chinese Long) v2carcuB0124
Carg06477Csa7G446940Cucumber (Chinese Long) v2carcuB0130
Carg06477MELO3C024248Melon (DHL92) v3.5.1carmeB0121
Carg06477ClCG09G001980Watermelon (Charleston Gray)carwcgB0117
Carg06477CSPI03G41900Wild cucumber (PI 183967)carcpiB0129
Carg06477CSPI07G21450Wild cucumber (PI 183967)carcpiB0135
Carg06477Cucsa.341570Cucumber (Gy14) v1carcgyB0144
Carg06477Cucsa.359190Cucumber (Gy14) v1carcgyB0147
Carg06477CmaCh08G007010Cucurbita maxima (Rimu)carcmaB0160
Carg06477CmaCh17G007960Cucurbita maxima (Rimu)carcmaB0155
Carg06477CmoCh08G006670Cucurbita moschata (Rifu)carcmoB0169
Carg06477CmoCh17G007660Cucurbita moschata (Rifu)carcmoB0164
Carg06477Cp4.1LG03g13940Cucurbita pepo (Zucchini)carcpeB0176
Carg06477CsGy3G039310Cucumber (Gy14) v2carcgybB0124
Carg06477MELO3C024248.2Melon (DHL92) v3.6.1carmedB0124
Carg06477CsaV3_7G033370Cucumber (Chinese Long) v3carcucB0139
Carg06477CsaV3_3G044330Cucumber (Chinese Long) v3carcucB0134
Carg06477Cla97C09G164120Watermelon (97103) v2carwmbB0127
Carg06477Bhi09G000135Wax gourdcarwgoB0149
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Carg06477Carg18793Silver-seed gourdcarcarB143
Carg06477Carg09522Silver-seed gourdcarcarB145
The following block(s) are covering this gene:
GeneOrganismBlock
Carg06477Silver-seed gourdcarcarB139
Carg06477Silver-seed gourdcarcarB140
Carg06477Cucumber (Gy14) v2carcgybB0125
Carg06477Cucumber (Gy14) v2carcgybB0130
Carg06477Cucumber (Gy14) v1carcgyB0140
Carg06477Cucurbita maxima (Rimu)carcmaB0154
Carg06477Cucurbita maxima (Rimu)carcmaB0157
Carg06477Cucurbita moschata (Rifu)carcmoB0166
Carg06477Cucurbita pepo (Zucchini)carcpeB0171
Carg06477Cucurbita pepo (Zucchini)carcpeB0173
Carg06477Cucurbita pepo (Zucchini)carcpeB0175
Carg06477Wild cucumber (PI 183967)carcpiB0131
Carg06477Wild cucumber (PI 183967)carcpiB0132
Carg06477Cucumber (Chinese Long) v2carcuB0126
Carg06477Cucumber (Chinese Long) v2carcuB0127
Carg06477Cucumber (Chinese Long) v3carcucB0135
Carg06477Bottle gourd (USVL1VR-Ls)carlsiB106
Carg06477Bottle gourd (USVL1VR-Ls)carlsiB109
Carg06477Melon (DHL92) v3.5.1carmeB0125
Carg06477Melon (DHL92) v3.6.1carmedB0130
Carg06477Melon (DHL92) v3.6.1carmedB0128
Carg06477Watermelon (Charleston Gray)carwcgB0121
Carg06477Watermelon (97103) v1carwmB0120
Carg06477Watermelon (97103) v2carwmbB0126
Carg06477Wax gourdcarwgoB0138
Carg06477Cucurbita moschata (Rifu)carcmoB0163