Carg06381 (gene) Silver-seed gourd

NameCarg06381
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionPentatricopeptide repeat
LocationCucurbita_argyrosperma_scaffold_016 : 1296341 .. 1298392 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
TTGGCAAAACCGTTAGAAGCGGGAAGTGAAGACGGCCACTCCCTCCAGCTCCAACTGCAAGTATCAGATAAATTCCTCATCGATTCAAATTTCTTCTCCATTTTCTCGGAACTTCATAGCAGAAGAAAGCTCAAATTGATGCTTATTTCTTCAAACTCATGCCATTTATGGCCCTCAACTCCGTCGACCCTTCTTCTCCTCCGCAAATGCGAGACTCAGAACGACGTGAATCAAATCCACGCCAGAATCATCAAAACCGGTCAGTTCAAAGATTCTTCCCTCGTAACCAAAATCATTCTCAATTCAATTTCTTCCCCCCACAGACCGCTTGTTGAATTCGCTCGCTACGTCTTCTTCACTCGCTATGCTGTTCAAAGAATTCGTCGGAATCATCTTGTTGACGATCCCTTTCTATGGAATGCTGTAATCAAATCGTATTCGCACGGGAATTATCCTATTCGAGCTCTGGTATTGTTCTGTATGATGCTTGAGAATGGATTTTGTGTTGATAAGTTTTCGTTTTCTTTGATTCTCAAAGCATGTGCTCGGGTGGGTTTGGTTGAGCAAGGGAAGCAGATTCATGGGTTTTTAATGAAGTTAGAAATTGGTTCGAATTTGTTTCTTCTTAATTGTTTGATTACGTTGTATATACGATGTGGGGAAATTGAGGTTGCACGGCAGGTGTTCGACAGAATGCCAATGCAGGACTCTGTTTCTTATAACTCGATGATTGATGGTTATGTGAAGTGTGGATTGGTTGATTTGGCCCGTGAATTGTTTGATTCTATGCCGTTGAAGGAGAAGAATTTGATCTCTTGGAACTCAATGATTGGTGGGTTTGCACAAACGAAAGATGGTGTTGAGTTAGCACTAGAACTGTTTGAGAAAATGCCTGAGAGAGACTTGGTTTCTTGGAACACAATTATTGGTGGATTTGCTAAATGCGGGCGCATGGAATTTGCGCATCATTTGTTCGATCGAATGCCGAAAAGGGATGTAATTAGTTGGTCTAACATGATCGATGGTTATGCGAAGTTGGGTGACATTGAGGTTGCAAGGAACCTGTTCGATGAAATGCCTGAGAAAGATGTGGTTGCTTATAATGCCATGATGGCTGGCTATGCTCAGAATGGTTATTACACAGAAGCATTAGAAATATTTTATACGATGCAGCGACAAAGAAACTTATCTCCCGAAGAAACGACGTTGGCGATTGCGTTTTCAGCTGTTTCTCAGTTGGGACACGTCGAGAAGGCTGAGAGTATGCATAGCTATTTAGTAGAAAATGGTTTTTCATTGATGGGAAAGGTTGGTGTTGGTCTTATTGACATGTATTCTAAATGTGGTAGCATCGAGAATGCCATGTCGATATTCAGAGGCATCGATGAGAAGGGTATCGACCATTGGAATGCTATGATCAGTGGAATGGCGAGAAACAGTTTGGGTGAGTTAGCCTTCAAGATGCTGATGGAGATGCAGAGGCTTTCCGTGATACCAGATGATATCACTTTCATCGGCGTGTTGAATGCTTGCGCGCATGCCGGGCTGGTTAAAGAGGGGACGATTTGTTTCGAGTTGATGAGAAAAGTACACAAGTTAGAGCCAAAGCTACAACATTATGGATGCATGGTTGACATCCTTGGCAAAGCAGGGCTTATAGAAAGAGCATTGAAATTCATAGAAGAGATGCCCATTGAGCCAAATGATATCATATGGAGGACTTTGCTTAGTGCTTGTCAAAACCATGAATATTTTACCATTGGAGAACCCATTGCCAAACATCTTATGAGGACGGATTCTTGTAACTCGAGTTCATACGTTCTTCTTTCGAATATTTACACACGTCTCGGCCTGTGGAGCGCTGCGAGCCAGGTACGAACAATGATGAAAAAGAGGAAGTTAACTAAAACTCCTGGCTGCAGTTGGATTGAACTTGAGGGAGTAGTTCATGAATTCTTGGTTCATGATAAATCTCATCCCCTTGTTACTGAAATATACTTGGTTTTGGATGGTTATGAAACATCAAATTTGCAGGATATTGACGGTAAAACT

mRNA sequence

TTGGCAAAACCGTTAGAAGCGGGAAGTGAAGACGGCCACTCCCTCCAGCTCCAACTGCAAGTATCAGATAAATTCCTCATCGATTCAAATTTCTTCTCCATTTTCTCGGAACTTCATAGCAGAAGAAAGCTCAAATTGATGCTTATTTCTTCAAACTCATGCCATTTATGGCCCTCAACTCCGTCGACCCTTCTTCTCCTCCGCAAATGCGAGACTCAGAACGACGTGAATCAAATCCACGCCAGAATCATCAAAACCGGTCAGTTCAAAGATTCTTCCCTCGTAACCAAAATCATTCTCAATTCAATTTCTTCCCCCCACAGACCGCTTGTTGAATTCGCTCGCTACGTCTTCTTCACTCGCTATGCTGTTCAAAGAATTCGTCGGAATCATCTTGTTGACGATCCCTTTCTATGGAATGCTGTAATCAAATCGTATTCGCACGGGAATTATCCTATTCGAGCTCTGGTATTGTTCTGTATGATGCTTGAGAATGGATTTTGTGTTGATAAGTTTTCGTTTTCTTTGATTCTCAAAGCATGTGCTCGGGTGGGTTTGGTTGAGCAAGGGAAGCAGATTCATGGGTTTTTAATGAAGTTAGAAATTGGTTCGAATTTGTTTCTTCTTAATTGTTTGATTACGTTGTATATACGATGTGGGGAAATTGAGGTTGCACGGCAGGTGTTCGACAGAATGCCAATGCAGGACTCTGTTTCTTATAACTCGATGATTGATGGTTATGTGAAGTGTGGATTGGTTGATTTGGCCCGTGAATTGTTTGATTCTATGCCGTTGAAGGAGAAGAATTTGATCTCTTGGAACTCAATGATTGGTGGGTTTGCACAAACGAAAGATGGTGTTGAGTTAGCACTAGAACTGTTTGAGAAAATGCCTGAGAGAGACTTGGTTTCTTGGAACACAATTATTGGTGGATTTGCTAAATGCGGGCGCATGGAATTTGCGCATCATTTGTTCGATCGAATGCCGAAAAGGGATGTAATTAGTTGGTCTAACATGATCGATGGTTATGCGAAGTTGGGTGACATTGAGGTTGCAAGGAACCTGTTCGATGAAATGCCTGAGAAAGATGTGGTTGCTTATAATGCCATGATGGCTGGCTATGCTCAGAATGGTTATTACACAGAAGCATTAGAAATATTTTATACGATGCAGCGACAAAGAAACTTATCTCCCGAAGAAACGACGTTGGCGATTGCGTTTTCAGCTGTTTCTCAGTTGGGACACGTCGAGAAGGCTGAGAGTATGCATAGCTATTTAGTAGAAAATGGTTTTTCATTGATGGGAAAGGTTGGTGTTGGTCTTATTGACATGTATTCTAAATGTGGTAGCATCGAGAATGCCATGTCGATATTCAGAGGCATCGATGAGAAGGGTATCGACCATTGGAATGCTATGATCAGTGGAATGGCGAGAAACAGTTTGGGTGAGTTAGCCTTCAAGATGCTGATGGAGATGCAGAGGCTTTCCGTGATACCAGATGATATCACTTTCATCGGCGTGTTGAATGCTTGCGCGCATGCCGGGCTGGTTAAAGAGGGGACGATTTGTTTCGAGTTGATGAGAAAAGTACACAAGTTAGAGCCAAAGCTACAACATTATGGATGCATGGTTGACATCCTTGGCAAAGCAGGGCTTATAGAAAGAGCATTGAAATTCATAGAAGAGATGCCCATTGAGCCAAATGATATCATATGGAGGACTTTGCTTAGTGCTTGTCAAAACCATGAATATTTTACCATTGGAGAACCCATTGCCAAACATCTTATGAGGACGGATTCTTGTAACTCGAGTTCATACGTTCTTCTTTCGAATATTTACACACGTCTCGGCCTGTGGAGCGCTGCGAGCCAGGTACGAACAATGATGAAAAAGAGGAAGTTAACTAAAACTCCTGGCTGCAGTTGGATTGAACTTGAGGGAGTAGTTCATGAATTCTTGGTTCATGATAAATCTCATCCCCTTGTTACTGAAATATACTTGGTTTTGGATGGTTATGAAACATCAAATTTGCAGGATATTGACGGTAAAACT

Coding sequence (CDS)

TTGGCAAAACCGTTAGAAGCGGGAAGTGAAGACGGCCACTCCCTCCAGCTCCAACTGCAAGTATCAGATAAATTCCTCATCGATTCAAATTTCTTCTCCATTTTCTCGGAACTTCATAGCAGAAGAAAGCTCAAATTGATGCTTATTTCTTCAAACTCATGCCATTTATGGCCCTCAACTCCGTCGACCCTTCTTCTCCTCCGCAAATGCGAGACTCAGAACGACGTGAATCAAATCCACGCCAGAATCATCAAAACCGGTCAGTTCAAAGATTCTTCCCTCGTAACCAAAATCATTCTCAATTCAATTTCTTCCCCCCACAGACCGCTTGTTGAATTCGCTCGCTACGTCTTCTTCACTCGCTATGCTGTTCAAAGAATTCGTCGGAATCATCTTGTTGACGATCCCTTTCTATGGAATGCTGTAATCAAATCGTATTCGCACGGGAATTATCCTATTCGAGCTCTGGTATTGTTCTGTATGATGCTTGAGAATGGATTTTGTGTTGATAAGTTTTCGTTTTCTTTGATTCTCAAAGCATGTGCTCGGGTGGGTTTGGTTGAGCAAGGGAAGCAGATTCATGGGTTTTTAATGAAGTTAGAAATTGGTTCGAATTTGTTTCTTCTTAATTGTTTGATTACGTTGTATATACGATGTGGGGAAATTGAGGTTGCACGGCAGGTGTTCGACAGAATGCCAATGCAGGACTCTGTTTCTTATAACTCGATGATTGATGGTTATGTGAAGTGTGGATTGGTTGATTTGGCCCGTGAATTGTTTGATTCTATGCCGTTGAAGGAGAAGAATTTGATCTCTTGGAACTCAATGATTGGTGGGTTTGCACAAACGAAAGATGGTGTTGAGTTAGCACTAGAACTGTTTGAGAAAATGCCTGAGAGAGACTTGGTTTCTTGGAACACAATTATTGGTGGATTTGCTAAATGCGGGCGCATGGAATTTGCGCATCATTTGTTCGATCGAATGCCGAAAAGGGATGTAATTAGTTGGTCTAACATGATCGATGGTTATGCGAAGTTGGGTGACATTGAGGTTGCAAGGAACCTGTTCGATGAAATGCCTGAGAAAGATGTGGTTGCTTATAATGCCATGATGGCTGGCTATGCTCAGAATGGTTATTACACAGAAGCATTAGAAATATTTTATACGATGCAGCGACAAAGAAACTTATCTCCCGAAGAAACGACGTTGGCGATTGCGTTTTCAGCTGTTTCTCAGTTGGGACACGTCGAGAAGGCTGAGAGTATGCATAGCTATTTAGTAGAAAATGGTTTTTCATTGATGGGAAAGGTTGGTGTTGGTCTTATTGACATGTATTCTAAATGTGGTAGCATCGAGAATGCCATGTCGATATTCAGAGGCATCGATGAGAAGGGTATCGACCATTGGAATGCTATGATCAGTGGAATGGCGAGAAACAGTTTGGGTGAGTTAGCCTTCAAGATGCTGATGGAGATGCAGAGGCTTTCCGTGATACCAGATGATATCACTTTCATCGGCGTGTTGAATGCTTGCGCGCATGCCGGGCTGGTTAAAGAGGGGACGATTTGTTTCGAGTTGATGAGAAAAGTACACAAGTTAGAGCCAAAGCTACAACATTATGGATGCATGGTTGACATCCTTGGCAAAGCAGGGCTTATAGAAAGAGCATTGAAATTCATAGAAGAGATGCCCATTGAGCCAAATGATATCATATGGAGGACTTTGCTTAGTGCTTGTCAAAACCATGAATATTTTACCATTGGAGAACCCATTGCCAAACATCTTATGAGGACGGATTCTTGTAACTCGAGTTCATACGTTCTTCTTTCGAATATTTACACACGTCTCGGCCTGTGGAGCGCTGCGAGCCAGGTACGAACAATGATGAAAAAGAGGAAGTTAACTAAAACTCCTGGCTGCAGTTGGATTGAACTTGAGGGAGTAGTTCATGAATTCTTGGTTCATGATAAATCTCATCCCCTTGTTACTGAAATATACTTGGTTTTGGATGGTTATGAAACATCAAATTTGCAGGATATTGACGGTAAAACT

Protein sequence

LAKPLEAGSEDGHSLQLQLQVSDKFLIDSNFFSIFSELHSRRKLKLMLISSNSCHLWPSTPSTLLLLRKCETQNDVNQIHARIIKTGQFKDSSLVTKIILNSISSPHRPLVEFARYVFFTRYAVQRIRRNHLVDDPFLWNAVIKSYSHGNYPIRALVLFCMMLENGFCVDKFSFSLILKACARVGLVEQGKQIHGFLMKLEIGSNLFLLNCLITLYIRCGEIEVARQVFDRMPMQDSVSYNSMIDGYVKCGLVDLARELFDSMPLKEKNLISWNSMIGGFAQTKDGVELALELFEKMPERDLVSWNTIIGGFAKCGRMEFAHHLFDRMPKRDVISWSNMIDGYAKLGDIEVARNLFDEMPEKDVVAYNAMMAGYAQNGYYTEALEIFYTMQRQRNLSPEETTLAIAFSAVSQLGHVEKAESMHSYLVENGFSLMGKVGVGLIDMYSKCGSIENAMSIFRGIDEKGIDHWNAMISGMARNSLGELAFKMLMEMQRLSVIPDDITFIGVLNACAHAGLVKEGTICFELMRKVHKLEPKLQHYGCMVDILGKAGLIERALKFIEEMPIEPNDIIWRTLLSACQNHEYFTIGEPIAKHLMRTDSCNSSSYVLLSNIYTRLGLWSAASQVRTMMKKRKLTKTPGCSWIELEGVVHEFLVHDKSHPLVTEIYLVLDGYETSNLQDIDGKT
BLAST of Carg06381 vs. NCBI nr
Match: XP_022974095.1 (pentatricopeptide repeat-containing protein At2g45350, chloroplastic [Cucurbita maxima])

HSP 1 Score: 957.6 bits (2474), Expect = 2.3e-275
Identity = 612/628 (97.45%), Postives = 616/628 (98.09%), Query Frame = 0

Query: 52  NSCHLWPSTPSTLLLLRKCETQNDVNQIHARIIKTGQFKDSSLVTKIILNSISSPHRPLV 111
           NSCHLWPSTPSTLLLLRKCETQNDVNQIHARIIKTGQFKDSSLVTKIILNSISSP+RPLV
Sbjct: 24  NSCHLWPSTPSTLLLLRKCETQNDVNQIHARIIKTGQFKDSSLVTKIILNSISSPNRPLV 83

Query: 112 EFARYVFFTRYAVQRIRRNHLVDDPFLWNAVIKSYSHGNYPIRALVLFCMMLENGFCVDK 171
           EFARYVFFT YAVQRIRRNH VDDPFLWNAVIKSYSHGN PIRALVLFCMMLENGFCVDK
Sbjct: 84  EFARYVFFTSYAVQRIRRNHFVDDPFLWNAVIKSYSHGNDPIRALVLFCMMLENGFCVDK 143

Query: 172 FSFSLILKACARVGLVEQGKQIHGFLMKLEIGSNLFLLNCLITLYIRCGEIEVARQVFDR 231
           FSFSLILKACARVGLVEQGKQIHGFLMKLEIGSNLFLLNCLI LYIRCGEIEVARQVFDR
Sbjct: 144 FSFSLILKACARVGLVEQGKQIHGFLMKLEIGSNLFLLNCLIALYIRCGEIEVARQVFDR 203

Query: 232 MPMQDSVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXKNLISWNSMIGGFAQTKDGVELAL 291
           MPMQDSVS XXXXXXXXXXXXXXXXXXXXXXXXXXXKNLISWNSMIGGFAQTKDGVELAL
Sbjct: 204 MPMQDSVSYXXXXXXXXXXXXXXXXXXXXXXXXXXXKNLISWNSMIGGFAQTKDGVELAL 263

Query: 292 ELFEKXXXXXXXXXXXXXXXXXXCGRMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 351
           ELFEKXXXXXXXXXXXXXXXXXXCGRMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 264 ELFEKXXXXXXXXXXXXXXXXXXCGRMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 323

Query: 352 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRQRNLSPEETTLAIAFSAVS 411
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRQRNLSPEETTLAIAFSAVS
Sbjct: 324 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRQRNLSPEETTLAIAFSAVS 383

Query: 412 QLGHVEKAESMHSYLVENGFSLMGKVGVGLIDMYSKCGSIENAMSIFRGIDEKGIDHWNA 471
           QLGHVEKAESMHSYLVENGFSLMGKVGVGLIDMYSKCGSIENAMSIFRGIDEKGIDHWNA
Sbjct: 384 QLGHVEKAESMHSYLVENGFSLMGKVGVGLIDMYSKCGSIENAMSIFRGIDEKGIDHWNA 443

Query: 472 MISGMARNSLGELAFKMLMEMQRLSVIPDDITFIGVLNACAHAGLVKEGTICFELMRKVH 531
           MISGMARN LGELAF+MLMEMQRLSVIPDDITFIGVLNACAHAGLVKEGTICFELMRKVH
Sbjct: 444 MISGMARNGLGELAFEMLMEMQRLSVIPDDITFIGVLNACAHAGLVKEGTICFELMRKVH 503

Query: 532 KLEPKLQHYGCMVDILGKAGLIERALKFIEEMPIEPNDIIWRTLLSACQNHEYFTIGEPI 591
           KLEPKLQHYGCMVDILGKAGLIERALKFIEEMPIEPNDIIWRTLLSACQNHE FTIGEPI
Sbjct: 504 KLEPKLQHYGCMVDILGKAGLIERALKFIEEMPIEPNDIIWRTLLSACQNHENFTIGEPI 563

Query: 592 AKHLMRTDSCNSSSYVLLSNIYTRLGLWSAASQVRTMMKKRKLTKTPGCSWIELEGVVHE 651
           AKHLMR DSCNSSSYVLLSNIYTRLGLWSAAS+VRTMMKKRKLTK PGCSWIEL+GVVHE
Sbjct: 564 AKHLMRMDSCNSSSYVLLSNIYTRLGLWSAASKVRTMMKKRKLTKIPGCSWIELKGVVHE 623

Query: 652 FLVHDKSHPLVTEIYLVLDGYETSNLQD 680
           FLVHDKSHPLVTEIY VLDG ETSNL D
Sbjct: 624 FLVHDKSHPLVTEIYFVLDGCETSNLHD 651

BLAST of Carg06381 vs. NCBI nr
Match: XP_022921803.1 (pentatricopeptide repeat-containing protein At2g45350, chloroplastic isoform X1 [Cucurbita moschata] >XP_022921874.1 pentatricopeptide repeat-containing protein At2g45350, chloroplastic isoform X1 [Cucurbita moschata])

HSP 1 Score: 878.2 bits (2268), Expect = 1.8e-251
Identity = 571/578 (98.79%), Postives = 574/578 (99.31%), Query Frame = 0

Query: 107 HRPLVEFARYVFFTRYAVQRIRRNHLVDDPFLWNAVIKSYSHGNYPIRALVLFCMMLENG 166
           +RPLVEFARYVFFTRYAVQRIRRNHLVDDPFLWNAVIKSYSHGNYPIRALVLFCMMLENG
Sbjct: 33  NRPLVEFARYVFFTRYAVQRIRRNHLVDDPFLWNAVIKSYSHGNYPIRALVLFCMMLENG 92

Query: 167 FCVDKFSFSLILKACARVGLVEQGKQIHGFLMKLEIGSNLFLLNCLITLYIRCGEIEVAR 226
           FCVDKFSFSLILKACARVGLVEQGKQIHGFLMKLEIGSNLFLLNCLITLYIRCGEIEVAR
Sbjct: 93  FCVDKFSFSLILKACARVGLVEQGKQIHGFLMKLEIGSNLFLLNCLITLYIRCGEIEVAR 152

Query: 227 QVFDRMPMQDSVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXKNLISWNSMIGGFAQTKDG 286
           QVFDRMPMQDSVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXKNLISWNSMIGGFAQTKDG
Sbjct: 153 QVFDRMPMQDSVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXKNLISWNSMIGGFAQTKDG 212

Query: 287 VELALELFEKXXXXXXXXXXXXXXXXXXCGRMXXXXXXXXXXXXXXXXXXXXXXXXXXXX 346
           VELALELFEKXXXXXXXXXXXXXXXXXXCGRMXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 213 VELALELFEKXXXXXXXXXXXXXXXXXXCGRMXXXXXXXXXXXXXXXXXXXXXXXXXXXX 272

Query: 347 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRQRNLSPEETTLAIA 406
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRQRNLSPEETTLAIA
Sbjct: 273 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRQRNLSPEETTLAIA 332

Query: 407 FSAVSQLGHVEKAESMHSYLVENGFSLMGKVGVGLIDMYSKCGSIENAMSIFRGIDEKGI 466
           FSAVSQLGHVEKAESMHSYLVENGFSLMGKVGVGLIDMYSKCGSIENAMSIFRGIDEKGI
Sbjct: 333 FSAVSQLGHVEKAESMHSYLVENGFSLMGKVGVGLIDMYSKCGSIENAMSIFRGIDEKGI 392

Query: 467 DHWNAMISGMARNSLGELAFKMLMEMQRLSVIPDDITFIGVLNACAHAGLVKEGTICFEL 526
           DHWNAMISGMARN LGELAFKMLMEMQRLSVIPDDITFIGVLNACAHAGLVKEGTICFEL
Sbjct: 393 DHWNAMISGMARNGLGELAFKMLMEMQRLSVIPDDITFIGVLNACAHAGLVKEGTICFEL 452

Query: 527 MRKVHKLEPKLQHYGCMVDILGKAGLIERALKFIEEMPIEPNDIIWRTLLSACQNHEYFT 586
           MRKVHKLEPKLQHYGCMVDILGKAGLIERALKFIEEMPIEPNDIIWRTLLSACQNHEYFT
Sbjct: 453 MRKVHKLEPKLQHYGCMVDILGKAGLIERALKFIEEMPIEPNDIIWRTLLSACQNHEYFT 512

Query: 587 IGEPIAKHLMRTDSCNSSSYVLLSNIYTRLGLWSAASQVRTMMKKRKLTKTPGCSWIELE 646
           IGEPIAKHLMRTDSCNSSSYVLLSNIYTRLGLWSAAS+VRTMMKKRKLTKTPGCSWIEL+
Sbjct: 513 IGEPIAKHLMRTDSCNSSSYVLLSNIYTRLGLWSAASKVRTMMKKRKLTKTPGCSWIELK 572

Query: 647 GVVHEFLVHDKSHPLVTEIYLVLDGYETSNLQDIDGKT 685
           GVVHEFL HDKSHPLVTEIY VLDG ETSNLQDIDGKT
Sbjct: 573 GVVHEFLAHDKSHPLVTEIYFVLDGCETSNLQDIDGKT 610

BLAST of Carg06381 vs. NCBI nr
Match: XP_004133915.1 (PREDICTED: pentatricopeptide repeat-containing protein At2g45350, chloroplastic [Cucumis sativus] >KGN56603.1 hypothetical protein Csa_3G126180 [Cucumis sativus])

HSP 1 Score: 858.6 bits (2217), Expect = 1.4e-245
Identity = 556/637 (87.28%), Postives = 586/637 (91.99%), Query Frame = 0

Query: 47  MLISSNSCHLWPSTPSTLLLLRKCETQNDVNQIHARIIKTGQFKDSSLVTKIILNSISSP 106
           ML+ +NSCHLWPSTP TLLLLR CETQNDVNQ+HARIIKTG  K+SSL TKIILNSISSP
Sbjct: 1   MLVPANSCHLWPSTPPTLLLLRHCETQNDVNQVHARIIKTGYLKNSSLTTKIILNSISSP 60

Query: 107 HRPLVEFARYVFFTRYAVQRIRRNHLVDDPFLWNAVIKSYSHGNYPIRALVLFCMMLENG 166
           H+PLVEFARYVFFTRYAVQRIRRNHL DDPFLWNAVIKSYSHGN P+RALVLFCMMLENG
Sbjct: 61  HKPLVEFARYVFFTRYAVQRIRRNHLDDDPFLWNAVIKSYSHGNEPVRALVLFCMMLENG 120

Query: 167 FCVDKFSFSLILKACARVGLVEQGKQIHGFLMKLEIGSNLFLLNCLITLYIRCGEIEVAR 226
           FCVDKFSFSLILKACARV LVE+GKQIHG LMKLEIGSNLFLLNCLI +Y+RCG+IE AR
Sbjct: 121 FCVDKFSFSLILKACARVCLVEEGKQIHGLLMKLEIGSNLFLLNCLIAMYLRCGDIEFAR 180

Query: 227 QVFDRMPMQDSVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXKNLISWNSMIGGFAQTKDG 286
           QVFDRMP+QDSVS XXXXXXXXXXXXXXXXXXXXXXXXXXX NLISWNSM+GGFAQTKDG
Sbjct: 181 QVFDRMPIQDSVSYXXXXXXXXXXXXXXXXXXXXXXXXXXXXNLISWNSMLGGFAQTKDG 240

Query: 287 VELALELFEKXXXXXXXXXXXXXXXXXXCGRMXXXXXXXXXXXXXXXXXXXXXXXXXXXX 346
           + LALELFEKXXXXXXXXXXXXXXXXXXCGR+ XXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 241 IGLALELFEKXXXXXXXXXXXXXXXXXXCGRIEXXXXXXXXXXXXXXXXXXXXXXXXXXX 300

Query: 347 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRQRNLSPEETTLAIA 406
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  Q NLSP+ETTL +A
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQSNLSPDETTLVVA 360

Query: 407 FSAVSQLGHVEKAESMHSYLVENGFSLMGKVGVGLIDMYSKCGSIENAMSIFRGIDEKGI 466
            SA+SQLGHVEKA SMH+Y +ENG S+ GKV V LIDMYSKCGSIENA+ IF G+D+KGI
Sbjct: 361 LSAISQLGHVEKAASMHNYFLENGISVTGKVAVALIDMYSKCGSIENAILIFDGVDQKGI 420

Query: 467 DHWNAMISGMARNSLGELAFKMLMEMQRLSVIPDDITFIGVLNACAHAGLVKEGTICFEL 526
           DHWNAMISGMARN LG+LAF ML+EM RLSV PD ITFIGVLNACAHAGLVKEG ICFEL
Sbjct: 421 DHWNAMISGMARNGLGKLAFGMLLEMHRLSVKPDGITFIGVLNACAHAGLVKEGLICFEL 480

Query: 527 MRKVHKLEPKLQHYGCMVDILGKAGLIERALKFIEEMPIEPNDIIWRTLLSACQNHEYFT 586
           MRKVHKLEPKLQHYGCMVDILGKAGL+E ALKFIEEMPIEPNDIIWRTLLSACQNHE FT
Sbjct: 481 MRKVHKLEPKLQHYGCMVDILGKAGLVEGALKFIEEMPIEPNDIIWRTLLSACQNHENFT 540

Query: 587 IGEPIAKHLMRTDSCNSSSYVLLSNIYTRLGLWSAASQVRTMMKKRKLTKTPGCSWIELE 646
           IGE IAKHLM  DSCNSSSYVLLSNIY RLGLWSAAS+VR MMKK+ LTK PGCSWIELE
Sbjct: 541 IGELIAKHLMTMDSCNSSSYVLLSNIYARLGLWSAASKVRMMMKKQNLTKVPGCSWIELE 600

Query: 647 GVVHEFLVHDKSHPLVTEIYLVLDGYETSNLQDIDGK 684
           GVVHEFLV DKSHP V+EIY VLDG+  SNLQ ID K
Sbjct: 601 GVVHEFLVRDKSHPYVSEIYSVLDGFGASNLQVIDCK 637

BLAST of Carg06381 vs. NCBI nr
Match: XP_008438168.1 (PREDICTED: pentatricopeptide repeat-containing protein At2g45350, chloroplastic [Cucumis melo])

HSP 1 Score: 855.9 bits (2210), Expect = 9.3e-245
Identity = 553/637 (86.81%), Postives = 585/637 (91.84%), Query Frame = 0

Query: 47  MLISSNSCHLWPSTPSTLLLLRKCETQNDVNQIHARIIKTGQFKDSSLVTKIILNSISSP 106
           ML+ +NSCHLWPSTP TLLLLR CETQNDVNQ+HARIIKTG  K+SSL TKIILNSISSP
Sbjct: 1   MLVPANSCHLWPSTPPTLLLLRHCETQNDVNQVHARIIKTGYLKNSSLTTKIILNSISSP 60

Query: 107 HRPLVEFARYVFFTRYAVQRIRRNHLVDDPFLWNAVIKSYSHGNYPIRALVLFCMMLENG 166
           H+PLVEFARYVFFTRYAVQRIRR+HL DDPFLWNAVIKSYSHGN P+RALVLFCMMLENG
Sbjct: 61  HKPLVEFARYVFFTRYAVQRIRRSHLDDDPFLWNAVIKSYSHGNDPVRALVLFCMMLENG 120

Query: 167 FCVDKFSFSLILKACARVGLVEQGKQIHGFLMKLEIGSNLFLLNCLITLYIRCGEIEVAR 226
           FCVDKFSFSLILKACARV LVE+GKQIHG LMKLEIGSNLFLLNCLI +Y+RCG+IE AR
Sbjct: 121 FCVDKFSFSLILKACARVCLVEEGKQIHGLLMKLEIGSNLFLLNCLIAMYLRCGDIEFAR 180

Query: 227 QVFDRMPMQDSVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXKNLISWNSMIGGFAQTKDG 286
           QVFD MP+QDSVS XXXXXXXXXXXXXXXXXXXXXXXXXXX NLISWNSM+GGFAQTKDG
Sbjct: 181 QVFDTMPVQDSVSYXXXXXXXXXXXXXXXXXXXXXXXXXXXXNLISWNSMLGGFAQTKDG 240

Query: 287 VELALELFEKXXXXXXXXXXXXXXXXXXCGRMXXXXXXXXXXXXXXXXXXXXXXXXXXXX 346
           + LALELFEK XXXXXXXXXXXXXXXXXCGR+ XXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 241 IGLALELFEKMXXXXXXXXXXXXXXXXXCGRIEXXXXXXXXXXXXXXXXXXXXXXXXXXX 300

Query: 347 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRQRNLSPEETTLAIA 406
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX RQ NLSP+ETTL +A
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRQSNLSPDETTLVVA 360

Query: 407 FSAVSQLGHVEKAESMHSYLVENGFSLMGKVGVGLIDMYSKCGSIENAMSIFRGIDEKGI 466
            SA+SQLGH+EKA SMH+Y VENG S+ GKV V LIDMYSKCGSIENA  IF G+D+KGI
Sbjct: 361 LSAISQLGHIEKAASMHNYFVENGISVTGKVAVALIDMYSKCGSIENAKLIFDGVDQKGI 420

Query: 467 DHWNAMISGMARNSLGELAFKMLMEMQRLSVIPDDITFIGVLNACAHAGLVKEGTICFEL 526
           DHWNAMISGMARN LG+LAF+ML+EM RL V PD ITFIGVLNACAHAGLVKEG ICFEL
Sbjct: 421 DHWNAMISGMARNGLGKLAFEMLVEMHRLPVKPDGITFIGVLNACAHAGLVKEGLICFEL 480

Query: 527 MRKVHKLEPKLQHYGCMVDILGKAGLIERALKFIEEMPIEPNDIIWRTLLSACQNHEYFT 586
           MRKVHKLEPKLQHYGCMVDILGKAGL+E ALKFIEEMPIEPNDIIWRTLLSACQNHE F 
Sbjct: 481 MRKVHKLEPKLQHYGCMVDILGKAGLVEGALKFIEEMPIEPNDIIWRTLLSACQNHENFA 540

Query: 587 IGEPIAKHLMRTDSCNSSSYVLLSNIYTRLGLWSAASQVRTMMKKRKLTKTPGCSWIELE 646
           IGE IAKHLMR DSCNSSSYVLLSNIY+RLGLWSAAS+VR  MKK+ LTK PGCSWIELE
Sbjct: 541 IGELIAKHLMRMDSCNSSSYVLLSNIYSRLGLWSAASKVRMTMKKKNLTKVPGCSWIELE 600

Query: 647 GVVHEFLVHDKSHPLVTEIYLVLDGYETSNLQDIDGK 684
           GVVHEFLV DKSHP V+EIY VLDG+ TSNLQ ID K
Sbjct: 601 GVVHEFLVRDKSHPYVSEIYSVLDGFGTSNLQVIDCK 637

BLAST of Carg06381 vs. NCBI nr
Match: XP_023540140.1 (pentatricopeptide repeat-containing protein At2g45350, chloroplastic isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 852.0 bits (2200), Expect = 1.3e-243
Identity = 560/581 (96.39%), Postives = 567/581 (97.59%), Query Frame = 0

Query: 104 SSPHRPLVEFARYVFFTRYAVQRIRRNHLVDDPFLWNAVIKSYSHGNYPIRALVLFCMML 163
           ++ +RPLVEFARYVFFTRYAVQRIRRNHLVDDPFLWNAVIKSYSHGN PIRALVLFCMML
Sbjct: 30  NNQNRPLVEFARYVFFTRYAVQRIRRNHLVDDPFLWNAVIKSYSHGNDPIRALVLFCMML 89

Query: 164 ENGFCVDKFSFSLILKACARVGLVEQGKQIHGFLMKLEIGSNLFLLNCLITLYIRCGEIE 223
           ENGFCVDKFSFSLILKACARVGLVEQGKQIHG LMKLEIGSNLFLLNCLI LYIRCGEIE
Sbjct: 90  ENGFCVDKFSFSLILKACARVGLVEQGKQIHGLLMKLEIGSNLFLLNCLIALYIRCGEIE 149

Query: 224 VARQVFDRMPMQDSVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXKNLISWNSMIGGFAQT 283
           VARQVFDRMPMQDSVS XXXXXXXXXXXXXXXXXXXXXXXXXXXKNLISWNSMIGGFAQT
Sbjct: 150 VARQVFDRMPMQDSVSYXXXXXXXXXXXXXXXXXXXXXXXXXXXKNLISWNSMIGGFAQT 209

Query: 284 KDGVELALELFEKXXXXXXXXXXXXXXXXXXCGRMXXXXXXXXXXXXXXXXXXXXXXXXX 343
           KDGVELALELFEKXXXXXXXXXXXXXXXXXXCGR+XXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 210 KDGVELALELFEKXXXXXXXXXXXXXXXXXXCGRIXXXXXXXXXXXXXXXXXXXXXXXXX 269

Query: 344 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRQRNLSPEETTL 403
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX RQ NLSPEETTL
Sbjct: 270 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRQSNLSPEETTL 329

Query: 404 AIAFSAVSQLGHVEKAESMHSYLVENGFSLMGKVGVGLIDMYSKCGSIENAMSIFRGIDE 463
           AIAFSAVSQLGHVEKAESMHSYLVENGFSLMGKVGVGLIDMYSKCGSIENAMSIFRGIDE
Sbjct: 330 AIAFSAVSQLGHVEKAESMHSYLVENGFSLMGKVGVGLIDMYSKCGSIENAMSIFRGIDE 389

Query: 464 KGIDHWNAMISGMARNSLGELAFKMLMEMQRLSVIPDDITFIGVLNACAHAGLVKEGTIC 523
           KGIDHWNAMISGMARN LGELAF+MLMEMQRLSVIPDDITFIGVLNACAHAGLVKEGTIC
Sbjct: 390 KGIDHWNAMISGMARNGLGELAFEMLMEMQRLSVIPDDITFIGVLNACAHAGLVKEGTIC 449

Query: 524 FELMRKVHKLEPKLQHYGCMVDILGKAGLIERALKFIEEMPIEPNDIIWRTLLSACQNHE 583
           FELMRKVHKLEPKLQHYGCMVDILGKAGLIERALKFIEEMPIEPNDIIWRTLLSACQNHE
Sbjct: 450 FELMRKVHKLEPKLQHYGCMVDILGKAGLIERALKFIEEMPIEPNDIIWRTLLSACQNHE 509

Query: 584 YFTIGEPIAKHLMRTDSCNSSSYVLLSNIYTRLGLWSAASQVRTMMKKRKLTKTPGCSWI 643
            FTIGEPIAKHLMR DSCNSSSYVLLSNIYTRLGLWS+AS+VRTMMKKRKLTKTPGCSWI
Sbjct: 510 NFTIGEPIAKHLMRMDSCNSSSYVLLSNIYTRLGLWSSASKVRTMMKKRKLTKTPGCSWI 569

Query: 644 ELEGVVHEFLVHDKSHPLVTEIYLVLDGYETSNLQDIDGKT 685
           ELEGVVHEFLVHDKSHPLVTEIY VLDGYETSNL   DGKT
Sbjct: 570 ELEGVVHEFLVHDKSHPLVTEIYFVLDGYETSNLH--DGKT 608

BLAST of Carg06381 vs. TAIR10
Match: AT2G45350.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 548.1 bits (1411), Expect = 7.6e-156
Identity = 404/596 (67.79%), Postives = 481/596 (80.70%), Query Frame = 0

Query: 59  STPSTLLLLRKCETQNDVNQIHARIIKTGQFKDSSLVTKIILNSISSPHRPLVEFARYVF 118
           S  ST+ +L  C+T +DVNQIH R+IKTG  K+S+L T+I+L   SS    L +FAR VF
Sbjct: 11  SISSTIHVLGSCKTSDDVNQIHGRLIKTGIIKNSNLTTRIVLAFASSRRPYLADFARCVF 70

Query: 119 FTRYAVQRIRRNHLVDDPFLWNAVIKSYSHGNYPIRALVLFCMMLENGFCVDKFSFSLIL 178
              Y V        V+DPFLWNAVIKS+SHG  P +AL+L C+MLENG  VDKFS SL+L
Sbjct: 71  H-EYHVCSFSFGE-VEDPFLWNAVIKSHSHGKDPRQALLLLCLMLENGVSVDKFSLSLVL 130

Query: 179 KACARVGLVEQGKQIHGFLMKLEIGSNLFLLNCLITLYIRCGEIEVARQVFDRMPMQDSV 238
           KAC+R+G V+ G QIHGFL K  + S+LFL NCLI LY++CG + ++RQ+FDRMP +DSV
Sbjct: 131 KACSRLGFVKGGMQIHGFLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSV 190

Query: 239 SXXXXXXXXXXXXXXXXXXXXXXXXXXXXKNLISWNSMIGGFAQTKDGVELALELFEKXX 298
           SXXXXXXXXXXXXXXXXXXXXXXXXXX  KNLISWNSMI G+AQT DGV++A +LF  XX
Sbjct: 191 SXXXXXXXXXXXXXXXXXXXXXXXXXXEMKNLISWNSMISGYAQTSDGVDIASKLFADXX 250

Query: 299 XXXXXXXXXXXXXXXXCGRMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 358
           XXXXXXXXXXXXXXXX GR+XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 251 XXXXXXXXXXXXXXXXHGRIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 310

Query: 359 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRQRNLSPEETTLAIAFSAVSQLGHVEK 418
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX+++ +L P++TTL I   A++QLG + K
Sbjct: 311 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKESHLLPDDTTLVIVLPAIAQLGRLSK 370

Query: 419 AESMHSYLVENGFSLMGKVGVGLIDMYSKCGSIENAMSIFRGIDEKGIDHWNAMISGMAR 478
           A  MH Y+VE  F L GK+GV LIDMYSKCGSI++AM +F GI+ K IDHWNAMI G+A 
Sbjct: 371 AIDMHLYIVEKQFYLGGKLGVALIDMYSKCGSIQHAMLVFEGIENKSIDHWNAMIGGLAI 430

Query: 479 NSLGELAFKMLMEMQRLSVIPDDITFIGVLNACAHAGLVKEGTICFELMRKVHKLEPKLQ 538
           + LGE AF ML++++RLS+ PDDITF+GVLNAC+H+GLVKEG +CFELMR+ HK+EP+LQ
Sbjct: 431 HGLGESAFDMLLQIERLSLKPDDITFVGVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQ 490

Query: 539 HYGCMVDILGKAGLIERALKFIEEMPIEPNDIIWRTLLSACQNHEYFTIGEPIAKHLMRT 598
           HYGCMVDIL ++G IE A   IEEMP+EPND+IWRT L+AC +H+ F  GE +AKHL+  
Sbjct: 491 HYGCMVDILSRSGSIELAKNLIEEMPVEPNDVIWRTFLTACSHHKEFETGELVAKHLILQ 550

Query: 599 DSCNSSSYVLLSNIYTRLGLWSAASQVRTMMKKRKLTKTPGCSWIELEGVVHEFLV 655
              N SSYVLLSN+Y   G+W    +VRTMMK+RK+ K PGCSWIEL+G VHEF V
Sbjct: 551 AGYNPSSYVLLSNMYASFGMWKDVRRVRTMMKERKIEKIPGCSWIELDGRVHEFFV 604

BLAST of Carg06381 vs. TAIR10
Match: AT5G48910.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 285.8 bits (730), Expect = 7.0e-77
Identity = 212/616 (34.42%), Postives = 321/616 (52.11%), Query Frame = 0

Query: 59  STPSTLL-LLRKCETQNDVNQIHARIIKTGQFKDSSLVTKII-LNSISSPHRPLVEFARY 118
           S PS+L   +  C T  D++QIHA  IK+GQ +D+    +I+   + S  H   +++A  
Sbjct: 21  SHPSSLFPQINNCRTIRDLSQIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHK 80

Query: 119 VFFTRYAVQRIRRNHLVDDPFLWNAVIKSYSHG--NYPIRALVLFCMMLENGFC-VDKFS 178
           +F      Q  +RN      F WN +I+ +S    +  + A+ LF  M+ + F   ++F+
Sbjct: 81  IF-----NQMPQRN-----CFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFT 140

Query: 179 FSLILKACARVGLVEQGKQIHGFLMKLEIGSNLFLLNCLITLYIRCGEIEVARQVFDRMP 238
           F  +LKACA+ G +++GKQIHG  +K   G + F+++ L+ +Y+ CG ++ AR +F +  
Sbjct: 141 FPSVLKACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNI 200

Query: 239 MQDSVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXKNLISWNSMIGGFAQTKDGVELALEL 298
           ++  +                               ++ WN MI G+ +  D  + A  L
Sbjct: 201 IEKDM-------------------VVMTDRRKRDGEIVLWNVMIDGYMRLGD-CKAARML 260

Query: 299 FEKXXXXXXXXXXXXXXXXXXCGRMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 358
           F+ XXXXXXXXXXXXXXXXXX    XXXXXXXXXXXX                       
Sbjct: 261 FDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXG---------------------- 320

Query: 359 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRQRNLSPEETTLAIAFSAVSQL 418
                                                    ++ P   TL     A+S+L
Sbjct: 321 -----------------------------------------DIRPNYVTLVSVLPAISRL 380

Query: 419 GHVEKAESMHSYLVENGFSLMGKVGVGLIDMYSKCGSIENAMSIFRGIDEKGIDHWNAMI 478
           G +E  E +H Y  ++G  +   +G  LIDMYSKCG IE A+ +F  +  + +  W+AMI
Sbjct: 381 GSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFERLPRENVITWSAMI 440

Query: 479 SGMARNSLGELAFKMLMEMQRLSVIPDDITFIGVLNACAHAGLVKEGTICFELMRKVHKL 538
           +G A +     A     +M++  V P D+ +I +L AC+H GLV+EG   F  M  V  L
Sbjct: 441 NGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVEEGRRYFSQMVSVDGL 500

Query: 539 EPKLQHYGCMVDILGKAGLIERALKFIEEMPIEPNDIIWRTLLSACQNHEYFTIGEPIAK 598
           EP+++HYGCMVD+LG++GL++ A +FI  MPI+P+D+IW+ LL AC+      +G+ +A 
Sbjct: 501 EPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKALLGACRMQGNVEMGKRVAN 543

Query: 599 HLMRTDSCNSSSYVLLSNIYTRLGLWSAASQVRTMMKKRKLTKTPGCSWIELEGVVHEFL 658
            LM     +S +YV LSN+Y   G WS  S++R  MK++ + K PGCS I+++GV+HEF+
Sbjct: 561 ILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRMKEKDIRKDPGCSLIDIDGVLHEFV 543

Query: 659 VHDKSHPLVTEIYLVL 670
           V D SHP   EI  +L
Sbjct: 621 VEDDSHPKAKEINSML 543

BLAST of Carg06381 vs. TAIR10
Match: AT5G66520.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 279.6 bits (714), Expect = 5.0e-75
Identity = 235/621 (37.84%), Postives = 335/621 (53.95%), Query Frame = 0

Query: 47  MLISSNSCHLWPSTPSTLLLLRKCETQNDVNQIHARIIKTGQFKDSSLVTKIILNSISSP 106
           M + S S  L  +   T+  L++C  Q ++ QIHAR++KTG  +DS  +TK +   ISS 
Sbjct: 1   MNVISCSFSLEHNLYETMSCLQRCSKQEELKQIHARMLKTGLMQDSYAITKFLSFCISST 60

Query: 107 HRPLVEFARYVF--FTRYAVQRIRRNHLVDDPFLWNAVIKSYSHGNYPIRALVLFCMMLE 166
               + +A+ VF  F R             D FLWN +I+ +S  + P R+L+L+  ML 
Sbjct: 61  SSDFLPYAQIVFDGFDR------------PDTFLWNLMIRGFSCSDEPERSLLLYQRMLC 120

Query: 167 NGFCVDKFSFSLILKACARVGLVEQGKQIHGFLMKLEIGSNLFLLNCLITLYIRCGEIEV 226
           +    + ++F  +LKAC+ +   E+  QIH  + KL   ++++ +N LI  Y   G  ++
Sbjct: 121 SSAPHNAYTFPSLLKACSNLSAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKL 180

Query: 227 ARQVFDRMPMQDSVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXKNLISWNSMIGGFAQTK 286
           A  +FDR+P                                                   
Sbjct: 181 AHLLFDRIP--------------------------------------------------- 240

Query: 287 DGVELALELFEKXXXXXXXXXXXXXXXXXXCGRMXXXXXXXXXXXXXXXXXXXXXXXXXX 346
                                                           XXXXXXXXXXXX
Sbjct: 241 ----------------------------------------------EPXXXXXXXXXXXX 300

Query: 347 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRQRNLSPEETTLA 406
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX     + P+  +LA
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEPDNVSLA 360

Query: 407 IAFSAVSQLGHVEKAESMHSYLVENGFSLMGKVGVGLIDMYSKCGSIENAMSIFRGIDEK 466
            A SA +QLG +E+ + +HSYL +    +   +G  LIDMY+KCG +E A+ +F+ I +K
Sbjct: 361 NALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKK 420

Query: 467 GIDHWNAMISGMARNSLGELAFKMLMEMQRLSVIPDDITFIGVLNACAHAGLVKEGTICF 526
            +  W A+ISG A +  G  A    MEMQ++ + P+ ITF  VL AC++ GLV+EG + F
Sbjct: 421 SVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIF 480

Query: 527 ELMRKVHKLEPKLQHYGCMVDILGKAGLIERALKFIEEMPIEPNDIIWRTLLSACQNHEY 586
             M + + L+P ++HYGC+VD+LG+AGL++ A +FI+EMP++PN +IW  LL AC+ H+ 
Sbjct: 481 YSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKN 512

Query: 587 FTIGEPIAKHLMRTDSCNSSSYVLLSNIYTRLGLWSAASQVRTMMKKRKLTKTPGCSWIE 646
             +GE I + L+  D  +   YV  +NI+     W  A++ R +MK++ + K PGCS I 
Sbjct: 541 IELGEEIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCSTIS 512

Query: 647 LEGVVHEFLVHDKSHPLVTEI 666
           LEG  HEFL  D+SHP + +I
Sbjct: 601 LEGTTHEFLAGDRSHPEIEKI 512

BLAST of Carg06381 vs. TAIR10
Match: AT2G29760.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 270.4 bits (690), Expect = 3.0e-72
Identity = 233/622 (37.46%), Postives = 340/622 (54.66%), Query Frame = 0

Query: 58  PSTPST-------LLLLRKCETQNDVNQIHARIIKTGQFKDSSLVTKIILNSISSPHRPL 117
           P+ P+T       + L+ +C +   + Q H  +I+TG F D    +K+   +  S    L
Sbjct: 21  PNQPTTNNERSRHISLIERCVSLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFASL 80

Query: 118 VEFARYVFFTRYAVQRIRRNHLVDDPFLWNAVIKSYSHGNYPIRALVLFCMMLENGFCV- 177
            E+AR VF        I +     + F WN +I++Y+ G  P+ ++  F  M+    C  
Sbjct: 81  -EYARKVF------DEIPK----PNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYP 140

Query: 178 DKFSFSLILKACARVGLVEQGKQIHGFLMKLEIGSNLFLLNCLITLYIRCGEIEVARQVF 237
           +K++F  ++KA A V  +  G+ +HG  +K  +GS++F+ N LI  Y  CG+++ A +VF
Sbjct: 141 NKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVF 200

Query: 238 DRMPMQDSVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXK-----NLISWNSMIGGFAQTK 297
             +  +    XXXXXXXXXXXXXXXXXXXXXXXXXXXX       ++   S        +
Sbjct: 201 TTIKEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVTMVGVLSACAKIRNLE 260

Query: 298 DGVELALELFEKXXXXXXXXXXXXXXXXXXCGRMXXXXXXXXXXXXXXXXXXXXXXXXXX 357
            G ++   + E                   CG +                   XXXXXXX
Sbjct: 261 FGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTXXXXXXX 320

Query: 358 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRQRNLSPEETTLA 417
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX              Q Q+N+   + TL 
Sbjct: 321 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGKPNEALIVFHELQLQKNMKLNQITLV 380

Query: 418 IAFSAVSQLGHVEKAESMHSYLVENGFSLMGKVGVGLIDMYSKCGSIENAMSIFRGIDEK 477
              SA +Q+G +E    +HSY+ ++G  +   V   LI MYSKCG +E +  +F  ++++
Sbjct: 381 STLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKR 440

Query: 478 GIDHWNAMISGMARNSLGELAFKMLMEMQRLSVIPDDITFIGVLNACAHAGLVKEGTICF 537
            +  W+AMI G+A +  G  A  M  +MQ  +V P+ +TF  V  AC+H GLV E    F
Sbjct: 441 DVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLF 500

Query: 538 ELMRKVHKLEPKLQHYGCMVDILGKAGLIERALKFIEEMPIEPNDIIWRTLLSACQNHEY 597
             M   + + P+ +HY C+VD+LG++G +E+A+KFIE MPI P+  +W  LL AC+ H  
Sbjct: 501 HQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHAN 560

Query: 598 FTIGEPIAKHLMRTDSCNSSSYVLLSNIYTRLGLWSAASQVRTMMKKRKLTKTPGCSWIE 657
             + E     L+  +  N  ++VLLSNIY +LG W   S++R  M+   L K PGCS IE
Sbjct: 561 LNLAEMACTRLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIE 620

Query: 658 LEGVVHEFLVHDKSHPLVTEIY 667
           ++G++HEFL  D +HP+  ++Y
Sbjct: 621 IDGMIHEFLSGDNAHPMSEKVY 631

BLAST of Carg06381 vs. TAIR10
Match: AT1G31920.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 270.0 bits (689), Expect = 4.0e-72
Identity = 178/613 (29.04%), Postives = 281/613 (45.84%), Query Frame = 0

Query: 64  LLLLRKCETQNDVNQIHARIIKTGQFKDSSL-VTKIILNSISSPHRPLVEFARYVFFTRY 123
           L LL++C   ++  Q+HAR IK   F  SS   + ++     S     + +A  +F    
Sbjct: 34  LYLLKRCHNIDEFKQVHARFIKLSLFYSSSFSASSVLAKCAHSGWENSMNYAASIF---- 93

Query: 124 AVQRIRRNHLVDDP--FLWNAVIKSYSHGNYPIRALVLFCMMLENGFCVDKFSFSLILKA 183
                     +DDP  F +N +I+ Y +      AL  +  M++ G   D F++  +LKA
Sbjct: 94  --------RGIDDPCTFDFNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKA 153

Query: 184 CARVGLVEQGKQIHGFLMKLEIGSNLFLLNCLITLYIRCGEIEVARQVFDRMPMQDSVSX 243
           C R+  + +GKQIHG + KL + +++F+ N LI +Y RCGE+E++  VF+++        
Sbjct: 154 CTRLKSIREGKQIHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKL-------- 213

Query: 244 XXXXXXXXXXXXXXXXXXXXXXXXXXXKNLISWNSMIGGFAQTKDGVELALELFEKXXXX 303
                                      K   SW+SM+   A      E  L LF      
Sbjct: 214 -------------------------ESKTAASWSSMVSARAGMGMWSECLL-LFR----- 273

Query: 304 XXXXXXXXXXXXXXCGRMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 363
                         C                                             
Sbjct: 274 ------------GMCS-------------------------------------------- 333

Query: 364 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRQRNLSPEETTLAIAFSAVSQLGHVEKAE 423
                                           + NL  EE+ +  A  A +  G +    
Sbjct: 334 --------------------------------ETNLKAEESGMVSALLACANTGALNLGM 393

Query: 424 SMHSYLVENGFSLMGKVGVGLIDMYSKCGSIENAMSIFRGIDEKGIDHWNAMISGMARNS 483
           S+H +L+ N   L   V   L+DMY KCG ++ A+ IF+ ++++    ++AMISG+A + 
Sbjct: 394 SIHGFLLRNISELNIIVQTSLVDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHG 453

Query: 484 LGELAFKMLMEMQRLSVIPDDITFIGVLNACAHAGLVKEGTICFELMRKVHKLEPKLQHY 543
            GE A +M  +M +  + PD + ++ VLNAC+H+GLVKEG   F  M K  K+EP  +HY
Sbjct: 454 EGESALRMFSKMIKEGLEPDHVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHY 507

Query: 544 GCMVDILGKAGLIERALKFIEEMPIEPNDIIWRTLLSACQNHEYFTIGEPIAKHLMRTDS 603
           GC+VD+LG+AGL+E AL+ I+ +PIE ND+IWRT LS C+  +   +G+  A+ L++  S
Sbjct: 514 GCLVDLLGRAGLLEEALETIQSIPIEKNDVIWRTFLSQCRVRQNIELGQIAAQELLKLSS 507

Query: 604 CNSSSYVLLSNIYTRLGLWSAASQVRTMMKKRKLTKTPGCSWIELEGVVHEFLVHDKSHP 663
            N   Y+L+SN+Y++  +W   ++ RT +  + L +TPG S +EL+G  H F+  D+SHP
Sbjct: 574 HNPGDYLLISNLYSQGQMWDDVARTRTEIAIKGLKQTPGFSIVELKGKTHRFVSQDRSHP 507

Query: 664 LVTEIYLVLDGYE 674
              EIY +L   E
Sbjct: 634 KCKEIYKMLHQME 507

BLAST of Carg06381 vs. Swiss-Prot
Match: sp|O22137|PP202_ARATH (Pentatricopeptide repeat-containing protein At2g45350, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CRR4 PE=1 SV=2)

HSP 1 Score: 548.1 bits (1411), Expect = 1.4e-154
Identity = 404/596 (67.79%), Postives = 481/596 (80.70%), Query Frame = 0

Query: 59  STPSTLLLLRKCETQNDVNQIHARIIKTGQFKDSSLVTKIILNSISSPHRPLVEFARYVF 118
           S  ST+ +L  C+T +DVNQIH R+IKTG  K+S+L T+I+L   SS    L +FAR VF
Sbjct: 11  SISSTIHVLGSCKTSDDVNQIHGRLIKTGIIKNSNLTTRIVLAFASSRRPYLADFARCVF 70

Query: 119 FTRYAVQRIRRNHLVDDPFLWNAVIKSYSHGNYPIRALVLFCMMLENGFCVDKFSFSLIL 178
              Y V        V+DPFLWNAVIKS+SHG  P +AL+L C+MLENG  VDKFS SL+L
Sbjct: 71  H-EYHVCSFSFGE-VEDPFLWNAVIKSHSHGKDPRQALLLLCLMLENGVSVDKFSLSLVL 130

Query: 179 KACARVGLVEQGKQIHGFLMKLEIGSNLFLLNCLITLYIRCGEIEVARQVFDRMPMQDSV 238
           KAC+R+G V+ G QIHGFL K  + S+LFL NCLI LY++CG + ++RQ+FDRMP +DSV
Sbjct: 131 KACSRLGFVKGGMQIHGFLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSV 190

Query: 239 SXXXXXXXXXXXXXXXXXXXXXXXXXXXXKNLISWNSMIGGFAQTKDGVELALELFEKXX 298
           SXXXXXXXXXXXXXXXXXXXXXXXXXX  KNLISWNSMI G+AQT DGV++A +LF  XX
Sbjct: 191 SXXXXXXXXXXXXXXXXXXXXXXXXXXEMKNLISWNSMISGYAQTSDGVDIASKLFADXX 250

Query: 299 XXXXXXXXXXXXXXXXCGRMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 358
           XXXXXXXXXXXXXXXX GR+XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 251 XXXXXXXXXXXXXXXXHGRIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 310

Query: 359 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRQRNLSPEETTLAIAFSAVSQLGHVEK 418
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX+++ +L P++TTL I   A++QLG + K
Sbjct: 311 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKESHLLPDDTTLVIVLPAIAQLGRLSK 370

Query: 419 AESMHSYLVENGFSLMGKVGVGLIDMYSKCGSIENAMSIFRGIDEKGIDHWNAMISGMAR 478
           A  MH Y+VE  F L GK+GV LIDMYSKCGSI++AM +F GI+ K IDHWNAMI G+A 
Sbjct: 371 AIDMHLYIVEKQFYLGGKLGVALIDMYSKCGSIQHAMLVFEGIENKSIDHWNAMIGGLAI 430

Query: 479 NSLGELAFKMLMEMQRLSVIPDDITFIGVLNACAHAGLVKEGTICFELMRKVHKLEPKLQ 538
           + LGE AF ML++++RLS+ PDDITF+GVLNAC+H+GLVKEG +CFELMR+ HK+EP+LQ
Sbjct: 431 HGLGESAFDMLLQIERLSLKPDDITFVGVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQ 490

Query: 539 HYGCMVDILGKAGLIERALKFIEEMPIEPNDIIWRTLLSACQNHEYFTIGEPIAKHLMRT 598
           HYGCMVDIL ++G IE A   IEEMP+EPND+IWRT L+AC +H+ F  GE +AKHL+  
Sbjct: 491 HYGCMVDILSRSGSIELAKNLIEEMPVEPNDVIWRTFLTACSHHKEFETGELVAKHLILQ 550

Query: 599 DSCNSSSYVLLSNIYTRLGLWSAASQVRTMMKKRKLTKTPGCSWIELEGVVHEFLV 655
              N SSYVLLSN+Y   G+W    +VRTMMK+RK+ K PGCSWIEL+G VHEF V
Sbjct: 551 AGYNPSSYVLLSNMYASFGMWKDVRRVRTMMKERKIEKIPGCSWIELDGRVHEFFV 604

BLAST of Carg06381 vs. Swiss-Prot
Match: sp|Q9FI80|PP425_ARATH (Pentatricopeptide repeat-containing protein At5g48910 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H38 PE=2 SV=1)

HSP 1 Score: 285.8 bits (730), Expect = 1.3e-75
Identity = 212/616 (34.42%), Postives = 321/616 (52.11%), Query Frame = 0

Query: 59  STPSTLL-LLRKCETQNDVNQIHARIIKTGQFKDSSLVTKII-LNSISSPHRPLVEFARY 118
           S PS+L   +  C T  D++QIHA  IK+GQ +D+    +I+   + S  H   +++A  
Sbjct: 21  SHPSSLFPQINNCRTIRDLSQIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHK 80

Query: 119 VFFTRYAVQRIRRNHLVDDPFLWNAVIKSYSHG--NYPIRALVLFCMMLENGFC-VDKFS 178
           +F      Q  +RN      F WN +I+ +S    +  + A+ LF  M+ + F   ++F+
Sbjct: 81  IF-----NQMPQRN-----CFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFT 140

Query: 179 FSLILKACARVGLVEQGKQIHGFLMKLEIGSNLFLLNCLITLYIRCGEIEVARQVFDRMP 238
           F  +LKACA+ G +++GKQIHG  +K   G + F+++ L+ +Y+ CG ++ AR +F +  
Sbjct: 141 FPSVLKACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNI 200

Query: 239 MQDSVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXKNLISWNSMIGGFAQTKDGVELALEL 298
           ++  +                               ++ WN MI G+ +  D  + A  L
Sbjct: 201 IEKDM-------------------VVMTDRRKRDGEIVLWNVMIDGYMRLGD-CKAARML 260

Query: 299 FEKXXXXXXXXXXXXXXXXXXCGRMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 358
           F+ XXXXXXXXXXXXXXXXXX    XXXXXXXXXXXX                       
Sbjct: 261 FDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXG---------------------- 320

Query: 359 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRQRNLSPEETTLAIAFSAVSQL 418
                                                    ++ P   TL     A+S+L
Sbjct: 321 -----------------------------------------DIRPNYVTLVSVLPAISRL 380

Query: 419 GHVEKAESMHSYLVENGFSLMGKVGVGLIDMYSKCGSIENAMSIFRGIDEKGIDHWNAMI 478
           G +E  E +H Y  ++G  +   +G  LIDMYSKCG IE A+ +F  +  + +  W+AMI
Sbjct: 381 GSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFERLPRENVITWSAMI 440

Query: 479 SGMARNSLGELAFKMLMEMQRLSVIPDDITFIGVLNACAHAGLVKEGTICFELMRKVHKL 538
           +G A +     A     +M++  V P D+ +I +L AC+H GLV+EG   F  M  V  L
Sbjct: 441 NGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVEEGRRYFSQMVSVDGL 500

Query: 539 EPKLQHYGCMVDILGKAGLIERALKFIEEMPIEPNDIIWRTLLSACQNHEYFTIGEPIAK 598
           EP+++HYGCMVD+LG++GL++ A +FI  MPI+P+D+IW+ LL AC+      +G+ +A 
Sbjct: 501 EPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKALLGACRMQGNVEMGKRVAN 543

Query: 599 HLMRTDSCNSSSYVLLSNIYTRLGLWSAASQVRTMMKKRKLTKTPGCSWIELEGVVHEFL 658
            LM     +S +YV LSN+Y   G WS  S++R  MK++ + K PGCS I+++GV+HEF+
Sbjct: 561 ILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRMKEKDIRKDPGCSLIDIDGVLHEFV 543

Query: 659 VHDKSHPLVTEIYLVL 670
           V D SHP   EI  +L
Sbjct: 621 VEDDSHPKAKEINSML 543

BLAST of Carg06381 vs. Swiss-Prot
Match: sp|Q9FJY7|PP449_ARATH (Pentatricopeptide repeat-containing protein At5g66520 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H61 PE=2 SV=1)

HSP 1 Score: 279.6 bits (714), Expect = 9.0e-74
Identity = 235/621 (37.84%), Postives = 335/621 (53.95%), Query Frame = 0

Query: 47  MLISSNSCHLWPSTPSTLLLLRKCETQNDVNQIHARIIKTGQFKDSSLVTKIILNSISSP 106
           M + S S  L  +   T+  L++C  Q ++ QIHAR++KTG  +DS  +TK +   ISS 
Sbjct: 1   MNVISCSFSLEHNLYETMSCLQRCSKQEELKQIHARMLKTGLMQDSYAITKFLSFCISST 60

Query: 107 HRPLVEFARYVF--FTRYAVQRIRRNHLVDDPFLWNAVIKSYSHGNYPIRALVLFCMMLE 166
               + +A+ VF  F R             D FLWN +I+ +S  + P R+L+L+  ML 
Sbjct: 61  SSDFLPYAQIVFDGFDR------------PDTFLWNLMIRGFSCSDEPERSLLLYQRMLC 120

Query: 167 NGFCVDKFSFSLILKACARVGLVEQGKQIHGFLMKLEIGSNLFLLNCLITLYIRCGEIEV 226
           +    + ++F  +LKAC+ +   E+  QIH  + KL   ++++ +N LI  Y   G  ++
Sbjct: 121 SSAPHNAYTFPSLLKACSNLSAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKL 180

Query: 227 ARQVFDRMPMQDSVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXKNLISWNSMIGGFAQTK 286
           A  +FDR+P                                                   
Sbjct: 181 AHLLFDRIP--------------------------------------------------- 240

Query: 287 DGVELALELFEKXXXXXXXXXXXXXXXXXXCGRMXXXXXXXXXXXXXXXXXXXXXXXXXX 346
                                                           XXXXXXXXXXXX
Sbjct: 241 ----------------------------------------------EPXXXXXXXXXXXX 300

Query: 347 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRQRNLSPEETTLA 406
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX     + P+  +LA
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEPDNVSLA 360

Query: 407 IAFSAVSQLGHVEKAESMHSYLVENGFSLMGKVGVGLIDMYSKCGSIENAMSIFRGIDEK 466
            A SA +QLG +E+ + +HSYL +    +   +G  LIDMY+KCG +E A+ +F+ I +K
Sbjct: 361 NALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKK 420

Query: 467 GIDHWNAMISGMARNSLGELAFKMLMEMQRLSVIPDDITFIGVLNACAHAGLVKEGTICF 526
            +  W A+ISG A +  G  A    MEMQ++ + P+ ITF  VL AC++ GLV+EG + F
Sbjct: 421 SVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIF 480

Query: 527 ELMRKVHKLEPKLQHYGCMVDILGKAGLIERALKFIEEMPIEPNDIIWRTLLSACQNHEY 586
             M + + L+P ++HYGC+VD+LG+AGL++ A +FI+EMP++PN +IW  LL AC+ H+ 
Sbjct: 481 YSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKN 512

Query: 587 FTIGEPIAKHLMRTDSCNSSSYVLLSNIYTRLGLWSAASQVRTMMKKRKLTKTPGCSWIE 646
             +GE I + L+  D  +   YV  +NI+     W  A++ R +MK++ + K PGCS I 
Sbjct: 541 IELGEEIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCSTIS 512

Query: 647 LEGVVHEFLVHDKSHPLVTEI 666
           LEG  HEFL  D+SHP + +I
Sbjct: 601 LEGTTHEFLAGDRSHPEIEKI 512

BLAST of Carg06381 vs. Swiss-Prot
Match: sp|O82380|PP175_ARATH (Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H33 PE=2 SV=1)

HSP 1 Score: 270.4 bits (690), Expect = 5.5e-71
Identity = 233/622 (37.46%), Postives = 340/622 (54.66%), Query Frame = 0

Query: 58  PSTPST-------LLLLRKCETQNDVNQIHARIIKTGQFKDSSLVTKIILNSISSPHRPL 117
           P+ P+T       + L+ +C +   + Q H  +I+TG F D    +K+   +  S    L
Sbjct: 21  PNQPTTNNERSRHISLIERCVSLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFASL 80

Query: 118 VEFARYVFFTRYAVQRIRRNHLVDDPFLWNAVIKSYSHGNYPIRALVLFCMMLENGFCV- 177
            E+AR VF        I +     + F WN +I++Y+ G  P+ ++  F  M+    C  
Sbjct: 81  -EYARKVF------DEIPK----PNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYP 140

Query: 178 DKFSFSLILKACARVGLVEQGKQIHGFLMKLEIGSNLFLLNCLITLYIRCGEIEVARQVF 237
           +K++F  ++KA A V  +  G+ +HG  +K  +GS++F+ N LI  Y  CG+++ A +VF
Sbjct: 141 NKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVF 200

Query: 238 DRMPMQDSVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXK-----NLISWNSMIGGFAQTK 297
             +  +    XXXXXXXXXXXXXXXXXXXXXXXXXXXX       ++   S        +
Sbjct: 201 TTIKEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVTMVGVLSACAKIRNLE 260

Query: 298 DGVELALELFEKXXXXXXXXXXXXXXXXXXCGRMXXXXXXXXXXXXXXXXXXXXXXXXXX 357
            G ++   + E                   CG +                   XXXXXXX
Sbjct: 261 FGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTXXXXXXX 320

Query: 358 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRQRNLSPEETTLA 417
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX              Q Q+N+   + TL 
Sbjct: 321 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGKPNEALIVFHELQLQKNMKLNQITLV 380

Query: 418 IAFSAVSQLGHVEKAESMHSYLVENGFSLMGKVGVGLIDMYSKCGSIENAMSIFRGIDEK 477
              SA +Q+G +E    +HSY+ ++G  +   V   LI MYSKCG +E +  +F  ++++
Sbjct: 381 STLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKR 440

Query: 478 GIDHWNAMISGMARNSLGELAFKMLMEMQRLSVIPDDITFIGVLNACAHAGLVKEGTICF 537
            +  W+AMI G+A +  G  A  M  +MQ  +V P+ +TF  V  AC+H GLV E    F
Sbjct: 441 DVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLF 500

Query: 538 ELMRKVHKLEPKLQHYGCMVDILGKAGLIERALKFIEEMPIEPNDIIWRTLLSACQNHEY 597
             M   + + P+ +HY C+VD+LG++G +E+A+KFIE MPI P+  +W  LL AC+ H  
Sbjct: 501 HQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHAN 560

Query: 598 FTIGEPIAKHLMRTDSCNSSSYVLLSNIYTRLGLWSAASQVRTMMKKRKLTKTPGCSWIE 657
             + E     L+  +  N  ++VLLSNIY +LG W   S++R  M+   L K PGCS IE
Sbjct: 561 LNLAEMACTRLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIE 620

Query: 658 LEGVVHEFLVHDKSHPLVTEIY 667
           ++G++HEFL  D +HP+  ++Y
Sbjct: 621 IDGMIHEFLSGDNAHPMSEKVY 631

BLAST of Carg06381 vs. Swiss-Prot
Match: sp|Q9C6T2|PPR68_ARATH (Pentatricopeptide repeat-containing protein At1g31920 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H11 PE=2 SV=1)

HSP 1 Score: 270.0 bits (689), Expect = 7.2e-71
Identity = 178/613 (29.04%), Postives = 281/613 (45.84%), Query Frame = 0

Query: 64  LLLLRKCETQNDVNQIHARIIKTGQFKDSSL-VTKIILNSISSPHRPLVEFARYVFFTRY 123
           L LL++C   ++  Q+HAR IK   F  SS   + ++     S     + +A  +F    
Sbjct: 34  LYLLKRCHNIDEFKQVHARFIKLSLFYSSSFSASSVLAKCAHSGWENSMNYAASIF---- 93

Query: 124 AVQRIRRNHLVDDP--FLWNAVIKSYSHGNYPIRALVLFCMMLENGFCVDKFSFSLILKA 183
                     +DDP  F +N +I+ Y +      AL  +  M++ G   D F++  +LKA
Sbjct: 94  --------RGIDDPCTFDFNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKA 153

Query: 184 CARVGLVEQGKQIHGFLMKLEIGSNLFLLNCLITLYIRCGEIEVARQVFDRMPMQDSVSX 243
           C R+  + +GKQIHG + KL + +++F+ N LI +Y RCGE+E++  VF+++        
Sbjct: 154 CTRLKSIREGKQIHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKL-------- 213

Query: 244 XXXXXXXXXXXXXXXXXXXXXXXXXXXKNLISWNSMIGGFAQTKDGVELALELFEKXXXX 303
                                      K   SW+SM+   A      E  L LF      
Sbjct: 214 -------------------------ESKTAASWSSMVSARAGMGMWSECLL-LFR----- 273

Query: 304 XXXXXXXXXXXXXXCGRMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 363
                         C                                             
Sbjct: 274 ------------GMCS-------------------------------------------- 333

Query: 364 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRQRNLSPEETTLAIAFSAVSQLGHVEKAE 423
                                           + NL  EE+ +  A  A +  G +    
Sbjct: 334 --------------------------------ETNLKAEESGMVSALLACANTGALNLGM 393

Query: 424 SMHSYLVENGFSLMGKVGVGLIDMYSKCGSIENAMSIFRGIDEKGIDHWNAMISGMARNS 483
           S+H +L+ N   L   V   L+DMY KCG ++ A+ IF+ ++++    ++AMISG+A + 
Sbjct: 394 SIHGFLLRNISELNIIVQTSLVDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHG 453

Query: 484 LGELAFKMLMEMQRLSVIPDDITFIGVLNACAHAGLVKEGTICFELMRKVHKLEPKLQHY 543
            GE A +M  +M +  + PD + ++ VLNAC+H+GLVKEG   F  M K  K+EP  +HY
Sbjct: 454 EGESALRMFSKMIKEGLEPDHVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHY 507

Query: 544 GCMVDILGKAGLIERALKFIEEMPIEPNDIIWRTLLSACQNHEYFTIGEPIAKHLMRTDS 603
           GC+VD+LG+AGL+E AL+ I+ +PIE ND+IWRT LS C+  +   +G+  A+ L++  S
Sbjct: 514 GCLVDLLGRAGLLEEALETIQSIPIEKNDVIWRTFLSQCRVRQNIELGQIAAQELLKLSS 507

Query: 604 CNSSSYVLLSNIYTRLGLWSAASQVRTMMKKRKLTKTPGCSWIELEGVVHEFLVHDKSHP 663
            N   Y+L+SN+Y++  +W   ++ RT +  + L +TPG S +EL+G  H F+  D+SHP
Sbjct: 574 HNPGDYLLISNLYSQGQMWDDVARTRTEIAIKGLKQTPGFSIVELKGKTHRFVSQDRSHP 507

Query: 664 LVTEIYLVLDGYE 674
              EIY +L   E
Sbjct: 634 KCKEIYKMLHQME 507

BLAST of Carg06381 vs. TrEMBL
Match: tr|A0A0A0L4E1|A0A0A0L4E1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G126180 PE=4 SV=1)

HSP 1 Score: 858.6 bits (2217), Expect = 9.5e-246
Identity = 556/637 (87.28%), Postives = 586/637 (91.99%), Query Frame = 0

Query: 47  MLISSNSCHLWPSTPSTLLLLRKCETQNDVNQIHARIIKTGQFKDSSLVTKIILNSISSP 106
           ML+ +NSCHLWPSTP TLLLLR CETQNDVNQ+HARIIKTG  K+SSL TKIILNSISSP
Sbjct: 1   MLVPANSCHLWPSTPPTLLLLRHCETQNDVNQVHARIIKTGYLKNSSLTTKIILNSISSP 60

Query: 107 HRPLVEFARYVFFTRYAVQRIRRNHLVDDPFLWNAVIKSYSHGNYPIRALVLFCMMLENG 166
           H+PLVEFARYVFFTRYAVQRIRRNHL DDPFLWNAVIKSYSHGN P+RALVLFCMMLENG
Sbjct: 61  HKPLVEFARYVFFTRYAVQRIRRNHLDDDPFLWNAVIKSYSHGNEPVRALVLFCMMLENG 120

Query: 167 FCVDKFSFSLILKACARVGLVEQGKQIHGFLMKLEIGSNLFLLNCLITLYIRCGEIEVAR 226
           FCVDKFSFSLILKACARV LVE+GKQIHG LMKLEIGSNLFLLNCLI +Y+RCG+IE AR
Sbjct: 121 FCVDKFSFSLILKACARVCLVEEGKQIHGLLMKLEIGSNLFLLNCLIAMYLRCGDIEFAR 180

Query: 227 QVFDRMPMQDSVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXKNLISWNSMIGGFAQTKDG 286
           QVFDRMP+QDSVS XXXXXXXXXXXXXXXXXXXXXXXXXXX NLISWNSM+GGFAQTKDG
Sbjct: 181 QVFDRMPIQDSVSYXXXXXXXXXXXXXXXXXXXXXXXXXXXXNLISWNSMLGGFAQTKDG 240

Query: 287 VELALELFEKXXXXXXXXXXXXXXXXXXCGRMXXXXXXXXXXXXXXXXXXXXXXXXXXXX 346
           + LALELFEKXXXXXXXXXXXXXXXXXXCGR+ XXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 241 IGLALELFEKXXXXXXXXXXXXXXXXXXCGRIEXXXXXXXXXXXXXXXXXXXXXXXXXXX 300

Query: 347 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRQRNLSPEETTLAIA 406
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  Q NLSP+ETTL +A
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQSNLSPDETTLVVA 360

Query: 407 FSAVSQLGHVEKAESMHSYLVENGFSLMGKVGVGLIDMYSKCGSIENAMSIFRGIDEKGI 466
            SA+SQLGHVEKA SMH+Y +ENG S+ GKV V LIDMYSKCGSIENA+ IF G+D+KGI
Sbjct: 361 LSAISQLGHVEKAASMHNYFLENGISVTGKVAVALIDMYSKCGSIENAILIFDGVDQKGI 420

Query: 467 DHWNAMISGMARNSLGELAFKMLMEMQRLSVIPDDITFIGVLNACAHAGLVKEGTICFEL 526
           DHWNAMISGMARN LG+LAF ML+EM RLSV PD ITFIGVLNACAHAGLVKEG ICFEL
Sbjct: 421 DHWNAMISGMARNGLGKLAFGMLLEMHRLSVKPDGITFIGVLNACAHAGLVKEGLICFEL 480

Query: 527 MRKVHKLEPKLQHYGCMVDILGKAGLIERALKFIEEMPIEPNDIIWRTLLSACQNHEYFT 586
           MRKVHKLEPKLQHYGCMVDILGKAGL+E ALKFIEEMPIEPNDIIWRTLLSACQNHE FT
Sbjct: 481 MRKVHKLEPKLQHYGCMVDILGKAGLVEGALKFIEEMPIEPNDIIWRTLLSACQNHENFT 540

Query: 587 IGEPIAKHLMRTDSCNSSSYVLLSNIYTRLGLWSAASQVRTMMKKRKLTKTPGCSWIELE 646
           IGE IAKHLM  DSCNSSSYVLLSNIY RLGLWSAAS+VR MMKK+ LTK PGCSWIELE
Sbjct: 541 IGELIAKHLMTMDSCNSSSYVLLSNIYARLGLWSAASKVRMMMKKQNLTKVPGCSWIELE 600

Query: 647 GVVHEFLVHDKSHPLVTEIYLVLDGYETSNLQDIDGK 684
           GVVHEFLV DKSHP V+EIY VLDG+  SNLQ ID K
Sbjct: 601 GVVHEFLVRDKSHPYVSEIYSVLDGFGASNLQVIDCK 637

BLAST of Carg06381 vs. TrEMBL
Match: tr|A0A1S3AWC2|A0A1S3AWC2_CUCME (pentatricopeptide repeat-containing protein At2g45350, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103483356 PE=4 SV=1)

HSP 1 Score: 855.9 bits (2210), Expect = 6.2e-245
Identity = 553/637 (86.81%), Postives = 585/637 (91.84%), Query Frame = 0

Query: 47  MLISSNSCHLWPSTPSTLLLLRKCETQNDVNQIHARIIKTGQFKDSSLVTKIILNSISSP 106
           ML+ +NSCHLWPSTP TLLLLR CETQNDVNQ+HARIIKTG  K+SSL TKIILNSISSP
Sbjct: 1   MLVPANSCHLWPSTPPTLLLLRHCETQNDVNQVHARIIKTGYLKNSSLTTKIILNSISSP 60

Query: 107 HRPLVEFARYVFFTRYAVQRIRRNHLVDDPFLWNAVIKSYSHGNYPIRALVLFCMMLENG 166
           H+PLVEFARYVFFTRYAVQRIRR+HL DDPFLWNAVIKSYSHGN P+RALVLFCMMLENG
Sbjct: 61  HKPLVEFARYVFFTRYAVQRIRRSHLDDDPFLWNAVIKSYSHGNDPVRALVLFCMMLENG 120

Query: 167 FCVDKFSFSLILKACARVGLVEQGKQIHGFLMKLEIGSNLFLLNCLITLYIRCGEIEVAR 226
           FCVDKFSFSLILKACARV LVE+GKQIHG LMKLEIGSNLFLLNCLI +Y+RCG+IE AR
Sbjct: 121 FCVDKFSFSLILKACARVCLVEEGKQIHGLLMKLEIGSNLFLLNCLIAMYLRCGDIEFAR 180

Query: 227 QVFDRMPMQDSVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXKNLISWNSMIGGFAQTKDG 286
           QVFD MP+QDSVS XXXXXXXXXXXXXXXXXXXXXXXXXXX NLISWNSM+GGFAQTKDG
Sbjct: 181 QVFDTMPVQDSVSYXXXXXXXXXXXXXXXXXXXXXXXXXXXXNLISWNSMLGGFAQTKDG 240

Query: 287 VELALELFEKXXXXXXXXXXXXXXXXXXCGRMXXXXXXXXXXXXXXXXXXXXXXXXXXXX 346
           + LALELFEK XXXXXXXXXXXXXXXXXCGR+ XXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 241 IGLALELFEKMXXXXXXXXXXXXXXXXXCGRIEXXXXXXXXXXXXXXXXXXXXXXXXXXX 300

Query: 347 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRQRNLSPEETTLAIA 406
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX RQ NLSP+ETTL +A
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRQSNLSPDETTLVVA 360

Query: 407 FSAVSQLGHVEKAESMHSYLVENGFSLMGKVGVGLIDMYSKCGSIENAMSIFRGIDEKGI 466
            SA+SQLGH+EKA SMH+Y VENG S+ GKV V LIDMYSKCGSIENA  IF G+D+KGI
Sbjct: 361 LSAISQLGHIEKAASMHNYFVENGISVTGKVAVALIDMYSKCGSIENAKLIFDGVDQKGI 420

Query: 467 DHWNAMISGMARNSLGELAFKMLMEMQRLSVIPDDITFIGVLNACAHAGLVKEGTICFEL 526
           DHWNAMISGMARN LG+LAF+ML+EM RL V PD ITFIGVLNACAHAGLVKEG ICFEL
Sbjct: 421 DHWNAMISGMARNGLGKLAFEMLVEMHRLPVKPDGITFIGVLNACAHAGLVKEGLICFEL 480

Query: 527 MRKVHKLEPKLQHYGCMVDILGKAGLIERALKFIEEMPIEPNDIIWRTLLSACQNHEYFT 586
           MRKVHKLEPKLQHYGCMVDILGKAGL+E ALKFIEEMPIEPNDIIWRTLLSACQNHE F 
Sbjct: 481 MRKVHKLEPKLQHYGCMVDILGKAGLVEGALKFIEEMPIEPNDIIWRTLLSACQNHENFA 540

Query: 587 IGEPIAKHLMRTDSCNSSSYVLLSNIYTRLGLWSAASQVRTMMKKRKLTKTPGCSWIELE 646
           IGE IAKHLMR DSCNSSSYVLLSNIY+RLGLWSAAS+VR  MKK+ LTK PGCSWIELE
Sbjct: 541 IGELIAKHLMRMDSCNSSSYVLLSNIYSRLGLWSAASKVRMTMKKKNLTKVPGCSWIELE 600

Query: 647 GVVHEFLVHDKSHPLVTEIYLVLDGYETSNLQDIDGK 684
           GVVHEFLV DKSHP V+EIY VLDG+ TSNLQ ID K
Sbjct: 601 GVVHEFLVRDKSHPYVSEIYSVLDGFGTSNLQVIDCK 637

BLAST of Carg06381 vs. TrEMBL
Match: tr|A0A0F7J492|A0A0F7J492_9ROSI (Chlororespiratory reduction 4 OS=Pelargonium tetragonum OX=122197 GN=crr4 PE=2 SV=1)

HSP 1 Score: 642.5 bits (1656), Expect = 1.1e-180
Identity = 429/628 (68.31%), Postives = 511/628 (81.37%), Query Frame = 0

Query: 49  ISSNSCHLWPSTPSTLLLLRKCETQNDVNQIHARIIKTGQFKDSSLVTKIILNSISSPHR 108
           +S+N    W ST  TLLLLRKC++QN VNQIHARII TG   + SL TK+ILN ISSPH 
Sbjct: 5   VSANWNQPWNSTLPTLLLLRKCKSQNHVNQIHARIITTGFIHNPSLTTKVILNFISSPHS 64

Query: 109 PLVEFARYVFFTRYAVQRIRRNHLVDDPFLWNAVIKSYSHGNYPIRALVLFCMMLENGFC 168
            L++FARYVFF+R+A Q  R     DDPFLWN +IKSYSHG+ PI+AL LF  ML+NG  
Sbjct: 65  SLLQFARYVFFSRHAFQDSRER---DDPFLWNLIIKSYSHGSQPIKALTLFSDMLQNGVP 124

Query: 169 VDKFSFSLILKACARVGLVEQGKQIHGFLMKLEIGSNLFLLNCLITLYIRCGEIEVARQV 228
           VD+FS SL+LKAC+R+GL+++G QIHGFL KL+IGS+LFL NCLI+ Y+RCG +E+A +V
Sbjct: 125 VDRFSISLVLKACSRLGLLKEGMQIHGFLAKLQIGSDLFLQNCLISWYLRCGCLELAHRV 184

Query: 229 FDRMPMQDSVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXKNLISWNSMIGGFAQTKDGVE 288
           F RM   DSVSXXXXXXXXXXXXXXXXXXXXXXXX    KNL SWNSMI G+AQ++DG++
Sbjct: 185 FSRMEKLDSVSXXXXXXXXXXXXXXXXXXXXXXXXPLDDKNLNSWNSMICGYAQSEDGLK 244

Query: 289 LALELFEKXXXXXXXXXXXXXXXXXXCGRMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 348
           +A ELF+      XXXXXXXX     CG+M  XXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 245 VAWELFDNMPERDXXXXXXXXDGCIKCGKMENXXXXXXXXXXXXXXXXXXXXXXXXXXXX 304

Query: 349 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRQRNLSPEETTLAIAFS 408
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX+ + NL P+ TTL I  S
Sbjct: 305 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGECNLKPDATTLLIVLS 364

Query: 409 AVSQLGHVEKAESMHSYLVENGFSLMGKVGVGLIDMYSKCGSIENAMSIFRGIDEKGIDH 468
           A++QLG++++   +H Y+  N  SL GK+GV LIDMYSKCGSIE+AMS+F  I+EK +DH
Sbjct: 365 AIAQLGYLDEGRDIHGYIEANRISLGGKLGVALIDMYSKCGSIEDAMSVFGNIEEKDVDH 424

Query: 469 WNAMISGMARNSLGELAFKMLMEMQRLSVIPDDITFIGVLNACAHAGLVKEGTICFELMR 528
           WNAMI G+A + LGELAF + M+M+RLSV+PDDITFIGVL+ACAHAGLVKEG +CFE+MR
Sbjct: 425 WNAMICGLAIHGLGELAFDLFMKMERLSVVPDDITFIGVLSACAHAGLVKEGLMCFEIMR 484

Query: 529 KVHKLEPKLQHYGCMVDILGKAGLIERALKFIEEMPIEPNDIIWRTLLSACQNHEYFTIG 588
           ++H+LEPKL H+GC++DILG+AG +E A K +EEMPIEPND+IWRTLLSAC NH    IG
Sbjct: 485 RIHRLEPKLHHFGCIIDILGRAGKLEEAWKIVEEMPIEPNDVIWRTLLSACNNHGNLKIG 544

Query: 589 EPIAKHLMRTDSCNSSSYVLLSNIYTRLGLWSAASQVRTMMKKRKLTKTPGCSWIELEGV 648
           EP+AK+L+  DSCNSSSYVLLSN+Y   G+WS  ++VRT+MK+R L K PGCSWIELEG+
Sbjct: 545 EPVAKYLINLDSCNSSSYVLLSNMYAGSGMWSNVNRVRTLMKERNLKKIPGCSWIELEGI 604

Query: 649 VHEFLVHDKSHPLVTEIYLVLDGYETSN 677
           VHEFLV DKSHP VTEI  +LD   T N
Sbjct: 605 VHEFLVQDKSHPQVTEICSLLDNMSTPN 629

BLAST of Carg06381 vs. TrEMBL
Match: tr|A0A0F7J3W3|A0A0F7J3W3_9ROSI (Chlororespiratory reduction 4 OS=Pelargonium dichondrifolium OX=73194 GN=crr4 PE=2 SV=1)

HSP 1 Score: 641.7 bits (1654), Expect = 1.8e-180
Identity = 426/630 (67.62%), Postives = 500/630 (79.37%), Query Frame = 0

Query: 47  MLISSNSCHLWPSTPSTLLLLRKCETQNDVNQIHARIIKTGQFKDSSLVTKIILNSISSP 106
           + +S+NS   W ST  TLLLL KC++QN VNQIHARII TG   ++SL TKIILN ISSP
Sbjct: 3   LCVSANSNQPWNSTLPTLLLLPKCKSQNHVNQIHARIITTGFINNTSLTTKIILNFISSP 62

Query: 107 HRPLVEFARYVFFTRYAVQRIRRNHLVDDPFLWNAVIKSYSHGNYPIRALVLFCMMLENG 166
           H  L++FARYVF +R+A +  R     DDPFLWN +IKSYSHG  PIRAL LF  MLEN 
Sbjct: 63  HSSLLQFARYVFLSRHAFKDSRER---DDPFLWNVIIKSYSHGCEPIRALTLFSDMLENR 122

Query: 167 FCVDKFSFSLILKACARVGLVEQGKQIHGFLMKLEIGSNLFLLNCLITLYIRCGEIEVAR 226
             VD+FSFSL+LKAC+RVGL+++G QIHGFL KL+IGS+LFL NCLI+LY RCG  E+AR
Sbjct: 123 VSVDRFSFSLVLKACSRVGLLKEGMQIHGFLAKLQIGSDLFLQNCLISLYFRCGCPELAR 182

Query: 227 QVFDRMPMQDSVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXKNLISWNSMIGGFAQTKDG 286
           +VF RM   DSVSXXXXXXXXXXXXXXXXXXXXXXXXX   KNL SWNSMI G+AQ++DG
Sbjct: 183 RVFSRMENLDSVSXXXXXXXXXXXXXXXXXXXXXXXXXLEDKNLNSWNSMIWGYAQSEDG 242

Query: 287 VELALELFEKXXXXXXXXXXXXXXXXXXCGRMXXXXXXXXXXXXXXXXXXXXXXXXXXXX 346
           +++A ELF+                   CG+M  XXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 243 LKVACELFDNMPERDLVSWNSMIDGCIKCGKMEDXXXXXXXXXXXXXXXXXXXXXXXXXX 302

Query: 347 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRQRNLSPEETTLAIA 406
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  + + NL P+ TTL I 
Sbjct: 303 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYIRGECNLKPDATTLLIV 362

Query: 407 FSAVSQLGHVEKAESMHSYLVENGFSLMGKVGVGLIDMYSKCGSIENAMSIFRGIDEKGI 466
            SA++QLG++++   +H Y+  N   L GK+GV LIDMYSKCGSIE+AM +F  I+EK +
Sbjct: 363 LSAIAQLGYLDEGRDIHGYIEVNRIYLGGKLGVALIDMYSKCGSIEHAMLVFGNIEEKDV 422

Query: 467 DHWNAMISGMARNSLGELAFKMLMEMQRLSVIPDDITFIGVLNACAHAGLVKEGTICFEL 526
           DHWNAMI G+A + LGELAF + MEM+R+SV+PDDITFIGVL+ACAHAGLVKEG +CFE+
Sbjct: 423 DHWNAMICGLAIHGLGELAFDLFMEMERISVVPDDITFIGVLSACAHAGLVKEGLMCFEI 482

Query: 527 MRKVHKLEPKLQHYGCMVDILGKAGLIERALKFIEEMPIEPNDIIWRTLLSACQNHEYFT 586
           MR++H+LEPKLQH+GC+VDILG+AG +E A K +EEMPIEPND+IWRTLLSAC NH    
Sbjct: 483 MRRIHRLEPKLQHFGCVVDILGRAGKLEEAWKVVEEMPIEPNDVIWRTLLSACNNHGNLK 542

Query: 587 IGEPIAKHLMRTDSCNSSSYVLLSNIYTRLGLWSAASQVRTMMKKRKLTKTPGCSWIELE 646
           IGEP+AKHL+  DS NSSSYVLLSN+Y   G+WS  S+VRTMMK+R L K PGCSWIELE
Sbjct: 543 IGEPVAKHLISLDSSNSSSYVLLSNMYAGFGMWSNVSRVRTMMKERNLKKIPGCSWIELE 602

Query: 647 GVVHEFLVHDKSHPLVTEIYLVLDGYETSN 677
           G+VHEFLV DKSHP VTEI  +LD   T N
Sbjct: 603 GIVHEFLVQDKSHPQVTEICSLLDYMSTPN 629

BLAST of Carg06381 vs. TrEMBL
Match: tr|A0A0F7DHH1|A0A0F7DHH1_9ROSI (Chlororespiratory reduction 4 OS=Pelargonium exstipulatum OX=59873 GN=crr4 PE=2 SV=1)

HSP 1 Score: 641.3 bits (1653), Expect = 2.4e-180
Identity = 424/628 (67.52%), Postives = 500/628 (79.62%), Query Frame = 0

Query: 47  MLISSNSCHLWPSTPSTLLLLRKCETQNDVNQIHARIIKTGQFKDSSLVTKIILNSISSP 106
           + +S+NS   W ST  TLLLL KC++QN VNQIHARII TG   ++SL TKIILN ISSP
Sbjct: 3   LCVSANSNQPWNSTLPTLLLLPKCKSQNHVNQIHARIITTGFINNTSLTTKIILNFISSP 62

Query: 107 HRPLVEFARYVFFTRYAVQRIRRNHLVDDPFLWNAVIKSYSHGNYPIRALVLFCMMLENG 166
           H  +++FARYVF +R+A +  R     DDPFLWN +IKSYSHG  PIRAL LF  MLENG
Sbjct: 63  HSSVLQFARYVFLSRHAFKDSRER---DDPFLWNVIIKSYSHGCEPIRALTLFSDMLENG 122

Query: 167 FCVDKFSFSLILKACARVGLVEQGKQIHGFLMKLEIGSNLFLLNCLITLYIRCGEIEVAR 226
             VD+FSFSL+LKAC+RVGL+++G QIHGFL KL+IGS+LFL NCLI+LY RCG  E+AR
Sbjct: 123 VSVDRFSFSLVLKACSRVGLLKEGMQIHGFLAKLQIGSDLFLQNCLISLYFRCGCPELAR 182

Query: 227 QVFDRMPMQDSVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXKNLISWNSMIGGFAQTKDG 286
           +VF RM   DSVSXXXXXXXXXXXXXXXXXXXXXXXXX   KNL SWNSMI G+AQ++DG
Sbjct: 183 RVFSRMENLDSVSXXXXXXXXXXXXXXXXXXXXXXXXXLEDKNLNSWNSMIWGYAQSEDG 242

Query: 287 VELALELFEKXXXXXXXXXXXXXXXXXXCGRMXXXXXXXXXXXXXXXXXXXXXXXXXXXX 346
           +++A ELF+                   CG+M  XXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 243 LKVACELFDNMPERDLVSWNSMIDGCIKCGKMEDXXXXXXXXXXXXXXXXXXXXXXXXXX 302

Query: 347 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRQRNLSPEETTLAIA 406
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  + + NL P+ TTL I 
Sbjct: 303 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYIRGECNLKPDATTLLIV 362

Query: 407 FSAVSQLGHVEKAESMHSYLVENGFSLMGKVGVGLIDMYSKCGSIENAMSIFRGIDEKGI 466
            SA++QLG++++   +H Y+  N   L GK+GV LIDMYSKCGS+E+AM +F  I+EK +
Sbjct: 363 LSAIAQLGYLDEGRDIHGYIEVNRIYLGGKLGVALIDMYSKCGSVEHAMLVFGNIEEKDV 422

Query: 467 DHWNAMISGMARNSLGELAFKMLMEMQRLSVIPDDITFIGVLNACAHAGLVKEGTICFEL 526
           DHWNAMI G+A + LGELAF + MEM+R+SV+PDDITFIGVL+ACAHAGLVKEG +CFE+
Sbjct: 423 DHWNAMICGLAIHGLGELAFDLFMEMERISVVPDDITFIGVLSACAHAGLVKEGLMCFEI 482

Query: 527 MRKVHKLEPKLQHYGCMVDILGKAGLIERALKFIEEMPIEPNDIIWRTLLSACQNHEYFT 586
           MR++H+LEPKLQH+GC+VDILG+AG +E A K +EEMPIEPND+IWRTLLSAC NH    
Sbjct: 483 MRRIHRLEPKLQHFGCVVDILGRAGKLEEAWKVVEEMPIEPNDVIWRTLLSACNNHGNLK 542

Query: 587 IGEPIAKHLMRTDSCNSSSYVLLSNIYTRLGLWSAASQVRTMMKKRKLTKTPGCSWIELE 646
           IGEP+AKHL+  DS NSSSYVLLSN+Y   G+WS  S+VRTMMK+R L K PGCSWIELE
Sbjct: 543 IGEPVAKHLISLDSSNSSSYVLLSNMYAGFGMWSNVSRVRTMMKERNLKKIPGCSWIELE 602

Query: 647 GVVHEFLVHDKSHPLVTEIYLVLDGYET 675
           G+VHEFLV DKSHP VTEI  +LD   T
Sbjct: 603 GIVHEFLVQDKSHPQVTEICSLLDYMST 627

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022974095.12.3e-27597.45pentatricopeptide repeat-containing protein At2g45350, chloroplastic [Cucurbita ... [more]
XP_022921803.11.8e-25198.79pentatricopeptide repeat-containing protein At2g45350, chloroplastic isoform X1 ... [more]
XP_004133915.11.4e-24587.28PREDICTED: pentatricopeptide repeat-containing protein At2g45350, chloroplastic ... [more]
XP_008438168.19.3e-24586.81PREDICTED: pentatricopeptide repeat-containing protein At2g45350, chloroplastic ... [more]
XP_023540140.11.3e-24396.39pentatricopeptide repeat-containing protein At2g45350, chloroplastic isoform X1 ... [more]
Match NameE-valueIdentityDescription
AT2G45350.17.6e-15667.79Pentatricopeptide repeat (PPR) superfamily protein[more]
AT5G48910.17.0e-7734.42Pentatricopeptide repeat (PPR) superfamily protein[more]
AT5G66520.15.0e-7537.84Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT2G29760.13.0e-7237.46Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT1G31920.14.0e-7229.04Tetratricopeptide repeat (TPR)-like superfamily protein[more]
Match NameE-valueIdentityDescription
sp|O22137|PP202_ARATH1.4e-15467.79Pentatricopeptide repeat-containing protein At2g45350, chloroplastic OS=Arabidop... [more]
sp|Q9FI80|PP425_ARATH1.3e-7534.42Pentatricopeptide repeat-containing protein At5g48910 OS=Arabidopsis thaliana OX... [more]
sp|Q9FJY7|PP449_ARATH9.0e-7437.84Pentatricopeptide repeat-containing protein At5g66520 OS=Arabidopsis thaliana OX... [more]
sp|O82380|PP175_ARATH5.5e-7137.46Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidop... [more]
sp|Q9C6T2|PPR68_ARATH7.2e-7129.04Pentatricopeptide repeat-containing protein At1g31920 OS=Arabidopsis thaliana OX... [more]
Match NameE-valueIdentityDescription
tr|A0A0A0L4E1|A0A0A0L4E1_CUCSA9.5e-24687.28Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G126180 PE=4 SV=1[more]
tr|A0A1S3AWC2|A0A1S3AWC2_CUCME6.2e-24586.81pentatricopeptide repeat-containing protein At2g45350, chloroplastic OS=Cucumis ... [more]
tr|A0A0F7J492|A0A0F7J492_9ROSI1.1e-18068.31Chlororespiratory reduction 4 OS=Pelargonium tetragonum OX=122197 GN=crr4 PE=2 S... [more]
tr|A0A0F7J3W3|A0A0F7J3W3_9ROSI1.8e-18067.62Chlororespiratory reduction 4 OS=Pelargonium dichondrifolium OX=73194 GN=crr4 PE... [more]
tr|A0A0F7DHH1|A0A0F7DHH1_9ROSI2.4e-18067.52Chlororespiratory reduction 4 OS=Pelargonium exstipulatum OX=59873 GN=crr4 PE=2 ... [more]
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf
IPR002885Pentatricopeptide_repeat
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg06381-RACarg06381-RAmRNA


Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 303..333
e-value: 2.0E-6
score: 25.6
coord: 271..303
e-value: 3.2E-4
score: 18.7
coord: 238..263
e-value: 3.6E-7
score: 28.0
coord: 365..398
e-value: 1.9E-6
score: 25.7
coord: 334..365
e-value: 9.0E-7
score: 26.7
coord: 138..170
e-value: 2.0E-4
score: 19.3
coord: 209..233
e-value: 0.0022
score: 16.0
coord: 469..500
e-value: 7.0E-5
score: 20.7
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 362..409
e-value: 2.9E-9
score: 36.8
coord: 469..512
e-value: 4.7E-10
score: 39.4
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 210..233
e-value: 0.015
score: 15.4
coord: 303..332
e-value: 4.8E-7
score: 29.5
coord: 271..301
e-value: 0.0051
score: 16.9
coord: 540..563
e-value: 0.0074
score: 16.4
coord: 238..264
e-value: 3.3E-8
score: 33.1
coord: 441..466
e-value: 0.031
score: 14.4
coord: 138..167
e-value: 3.7E-4
score: 20.5
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 332..366
score: 11.816
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 205..235
score: 8.287
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 135..169
score: 9.153
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 399..433
score: 7.015
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 271..300
score: 7.026
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 170..204
score: 7.432
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 500..530
score: 6.577
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 367..398
score: 7.563
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 301..331
score: 10.786
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 536..566
score: 7.07
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 236..270
score: 11.06
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 465..499
score: 9.12
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 602..636
score: 7.607
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3DG3DSA:1.25.40.10coord: 360..438
e-value: 8.4E-12
score: 46.7
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3DG3DSA:1.25.40.10coord: 98..234
e-value: 3.7E-19
score: 71.2
coord: 235..331
e-value: 8.9E-24
score: 86.4
coord: 439..653
e-value: 1.5E-35
score: 125.0
NoneNo IPR availablePANTHERPTHR24015:SF867SUBFAMILY NOT NAMEDcoord: 312..354
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 349..660
NoneNo IPR availablePANTHERPTHR24015:SF867SUBFAMILY NOT NAMEDcoord: 349..660
NoneNo IPR availablePANTHERPTHR24015:SF867SUBFAMILY NOT NAMEDcoord: 49..283
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 49..283
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 312..354