Carg06354 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ACGTCCTCCACGCTTCTATATAAAAACCATGAATTTCCAATTTGCCGGACACTTCAACCAGAAAAGCTCTGAATCTTGCTTGATTGTTCATCAATGGCGGAGCTAGAGGACCCGACTGTGATGCCGAAACTGATCAATTTTCTCTCTTGTCTTCTTCAAAGAGTGGCTGAATCCAACGATCAAAACCTCTCTGTTCATCTTCAACATCACAAAATCTCAGCCTTCCATGGCTTAACTCGTCCCGCCATTTCAATCCAAAGCTACTTGGATAGGATCTTTAAGTACGCCAATTGCAGTCCCTGTTGCTTCGTCGTTGCCTACATTTATCTCGATCGCTTTGTTCAAAGGCAGCCCTCGCTGCCCATCAATTCCTTCAATGTTCATCGCTTGCTCATCACTAGCGTTCTTGTTTCTGCTAAATTTATGGATGATACGTGAGTTTCTTAATCTTCTTGAAAATGTGGGATTTGATTTGGGTTTGTTTTCGTTTTTTTTACCTTTTCAAGTATGCCTGCAAGGTTACTGATGAAATGCCTCAATGAGTTCTGTTTTTTTAATGTCGGATAGGGGTTTTGAGACGTCGATTTGGCTTGCTAATTATGTTTTTTTAAACTGAAATTGTGGTTTTTGATTGACGAAAACTTGATGTTTTTAAAGATTCTTTCATCTCAAATTTCTATGATCTTTATATGGGTTTGTTTTGATGAATTTGATGCTATGAGCAACTTGTTTGTTTTTTGGGAATCTTCTTGTCATTGTTCATCATTTCATCATATACTCGCCGAATCTCTCATTCTCAACAGCTATGCAGCCAACAAAAAAGCATAGTGAACCAACCATGAATTTACTTTACAAATTTGCTTCCATAAACAGCATTTTCCCCAAAAACATCAAAAAGGGGCTTTGAATTTGGGCAATTTGAGTTGAAATTTGGGCAATTTGTTATGCTTATTCAGGTACTATAACAATGCATATTATGCAAAAGTGGGAGGGATCAGCACAGCGGAAATAAACTTTCTTGAAGTGGATTTCTTGTTTGGTTTGGGCTTTCACTTGAATGTCACTCCCAACACTTTCCATTCTTATTACTCATATCTTCAAAGACAAATGCTTCTGCTTCAACCTCCTCTCAGTAGCGCTTCTGCAAAATCAGAGCTGATTCTTACAGCCAGAGCTCTGAAACCCCACTTTTGTTTCGATGAAGATGAAGCTTCCCATAAGAAGCAACAGCTTGCAGCTGTTTGAACAAGTTTTTGCCCCAAATTTGGATTCAAAATTTGGAGATTATGGGCAAATTCCTCAGCCCATTTGGAGCAAAACCCAGGTTTCTAAAATTGGATTCTCTCTAGTTTTGAGTATGAATTTGTTCTGTTGTTTGCCTGATTAGATAGCTATATTCAGCCACTGACTGGATGAGTCTGTAATGTATGTATATATGTATCTCTCACATATACA ACGTCCTCCACGCTTCTATATAAAAACCATGAATTTCCAATTTGCCGGACACTTCAACCAGAAAAGCTCTGAATCTTGCTTGATTGTTCATCAATGGCGGAGCTAGAGGACCCGACTGTGATGCCGAAACTGATCAATTTTCTCTCTTGTCTTCTTCAAAGAGTGGCTGAATCCAACGATCAAAACCTCTCTGTTCATCTTCAACATCACAAAATCTCAGCCTTCCATGGCTTAACTCGTCCCGCCATTTCAATCCAAAGCTACTTGGATAGGATCTTTAAGTACGCCAATTGCAGTCCCTGTTGCTTCGTCGTTGCCTACATTTATCTCGATCGCTTTGTTCAAAGGCAGCCCTCGCTGCCCATCAATTCCTTCAATGTTCATCGCTTGCTCATCACTAGCGTTCTTGTTTCTGCTAAATTTATGGATGATACGTACTATAACAATGCATATTATGCAAAAGTGGGAGGGATCAGCACAGCGGAAATAAACTTTCTTGAAGTGGATTTCTTGTTTGGTTTGGGCTTTCACTTGAATGTCACTCCCAACACTTTCCATTCTTATTACTCATATCTTCAAAGACAAATGCTTCTGCTTCAACCTCCTCTCAGTAGCGCTTCTGCAAAATCAGAGCTGATTCTTACAGCCAGAGCTCTGAAACCCCACTTTTGTTTCGATGAAGATGAAGCTTCCCATAAGAAGCAACAGCTTGCAGCTGTTTGAACAAGTTTTTGCCCCAAATTTGGATTCAAAATTTGGAGATTATGGGCAAATTCCTCAGCCCATTTGGAGCAAAACCCAGGTTTCTAAAATTGGATTCTCTCTAGTTTTGAGTATGAATTTGTTCTGTTGTTTGCCTGATTAGATAGCTATATTCAGCCACTGACTGGATGAGTCTGTAATGTATGTATATATGTATCTCTCACATATACA ATGGCGGAGCTAGAGGACCCGACTGTGATGCCGAAACTGATCAATTTTCTCTCTTGTCTTCTTCAAAGAGTGGCTGAATCCAACGATCAAAACCTCTCTGTTCATCTTCAACATCACAAAATCTCAGCCTTCCATGGCTTAACTCGTCCCGCCATTTCAATCCAAAGCTACTTGGATAGGATCTTTAAGTACGCCAATTGCAGTCCCTGTTGCTTCGTCGTTGCCTACATTTATCTCGATCGCTTTGTTCAAAGGCAGCCCTCGCTGCCCATCAATTCCTTCAATGTTCATCGCTTGCTCATCACTAGCGTTCTTGTTTCTGCTAAATTTATGGATGATACGTACTATAACAATGCATATTATGCAAAAGTGGGAGGGATCAGCACAGCGGAAATAAACTTTCTTGAAGTGGATTTCTTGTTTGGTTTGGGCTTTCACTTGAATGTCACTCCCAACACTTTCCATTCTTATTACTCATATCTTCAAAGACAAATGCTTCTGCTTCAACCTCCTCTCAGTAGCGCTTCTGCAAAATCAGAGCTGATTCTTACAGCCAGAGCTCTGAAACCCCACTTTTGTTTCGATGAAGATGAAGCTTCCCATAAGAAGCAACAGCTTGCAGCTGTTTGA MAELEDPTVMPKLINFLSCLLQRVAESNDQNLSVHLQHHKISAFHGLTRPAISIQSYLDRIFKYANCSPCCFVVAYIYLDRFVQRQPSLPINSFNVHRLLITSVLVSAKFMDDTYYNNAYYAKVGGISTAEINFLEVDFLFGLGFHLNVTPNTFHSYYSYLQRQMLLLQPPLSSASAKSELILTARALKPHFCFDEDEASHKKQQLAAV
BLAST of Carg06354 vs. NCBI nr
Match: XP_022974161.1 (cyclin-U4-1-like [Cucurbita maxima]) HSP 1 Score: 420.2 bits (1079), Expect = 4.0e-114 Identity = 208/209 (99.52%), Postives = 208/209 (99.52%), Query Frame = 0
BLAST of Carg06354 vs. NCBI nr
Match: XP_022963826.1 (cyclin-U4-1-like [Cucurbita moschata]) HSP 1 Score: 418.7 bits (1075), Expect = 1.2e-113 Identity = 208/209 (99.52%), Postives = 208/209 (99.52%), Query Frame = 0
BLAST of Carg06354 vs. NCBI nr
Match: XP_023539091.1 (cyclin-U4-1-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 416.4 bits (1069), Expect = 5.8e-113 Identity = 206/209 (98.56%), Postives = 207/209 (99.04%), Query Frame = 0
BLAST of Carg06354 vs. NCBI nr
Match: XP_008438223.1 (PREDICTED: cyclin-U4-1 [Cucumis melo]) HSP 1 Score: 384.8 bits (987), Expect = 1.9e-103 Identity = 192/211 (91.00%), Postives = 203/211 (96.21%), Query Frame = 0
BLAST of Carg06354 vs. NCBI nr
Match: XP_004133942.1 (PREDICTED: cyclin-U4-1 [Cucumis sativus] >KGN56640.1 Cyclin-dependent protein kinase [Cucumis sativus]) HSP 1 Score: 381.7 bits (979), Expect = 1.6e-102 Identity = 192/211 (91.00%), Postives = 202/211 (95.73%), Query Frame = 0
BLAST of Carg06354 vs. TAIR10
Match: AT2G44740.1 (cyclin p4;1) HSP 1 Score: 279.6 bits (714), Expect = 1.5e-75 Identity = 140/203 (68.97%), Postives = 164/203 (80.79%), Query Frame = 0
BLAST of Carg06354 vs. TAIR10
Match: AT5G61650.1 (CYCLIN P4;2) HSP 1 Score: 224.2 bits (570), Expect = 7.6e-59 Identity = 125/218 (57.34%), Postives = 162/218 (74.31%), Query Frame = 0
BLAST of Carg06354 vs. TAIR10
Match: AT5G07450.1 (cyclin p4;3) HSP 1 Score: 213.4 bits (542), Expect = 1.3e-55 Identity = 101/159 (63.52%), Postives = 133/159 (83.65%), Query Frame = 0
BLAST of Carg06354 vs. TAIR10
Match: AT3G21870.1 (cyclin p2;1) HSP 1 Score: 145.6 bits (366), Expect = 3.5e-35 Identity = 73/184 (39.67%), Postives = 113/184 (61.41%), Query Frame = 0
BLAST of Carg06354 vs. TAIR10
Match: AT3G63120.1 (cyclin p1;1) HSP 1 Score: 143.7 bits (361), Expect = 1.3e-34 Identity = 71/154 (46.10%), Postives = 104/154 (67.53%), Query Frame = 0
BLAST of Carg06354 vs. Swiss-Prot
Match: sp|O80513|CCU41_ARATH (Cyclin-U4-1 OS=Arabidopsis thaliana OX=3702 GN=CYCU4-1 PE=1 SV=1) HSP 1 Score: 279.6 bits (714), Expect = 2.8e-74 Identity = 140/203 (68.97%), Postives = 164/203 (80.79%), Query Frame = 0
BLAST of Carg06354 vs. Swiss-Prot
Match: sp|Q9FKF6|CCU43_ARATH (Cyclin-U4-3 OS=Arabidopsis thaliana OX=3702 GN=CYCU4-3 PE=1 SV=1) HSP 1 Score: 224.2 bits (570), Expect = 1.4e-57 Identity = 125/218 (57.34%), Postives = 162/218 (74.31%), Query Frame = 0
BLAST of Carg06354 vs. Swiss-Prot
Match: sp|Q9LY16|CCU42_ARATH (Cyclin-U4-2 OS=Arabidopsis thaliana OX=3702 GN=CYCU4-2 PE=1 SV=1) HSP 1 Score: 213.4 bits (542), Expect = 2.4e-54 Identity = 101/159 (63.52%), Postives = 133/159 (83.65%), Query Frame = 0
BLAST of Carg06354 vs. Swiss-Prot
Match: sp|Q7XC35|CCP41_ORYSJ (Cyclin-P4-1 OS=Oryza sativa subsp. japonica OX=39947 GN=CYCP4-1 PE=2 SV=1) HSP 1 Score: 193.7 bits (491), Expect = 2.0e-48 Identity = 97/165 (58.79%), Postives = 123/165 (74.55%), Query Frame = 0
BLAST of Carg06354 vs. Swiss-Prot
Match: sp|Q75HV0|CCP31_ORYSJ (Cyclin-P3-1 OS=Oryza sativa subsp. japonica OX=39947 GN=CYCP3-1 PE=3 SV=1) HSP 1 Score: 151.4 bits (381), Expect = 1.1e-35 Identity = 77/161 (47.83%), Postives = 109/161 (67.70%), Query Frame = 0
BLAST of Carg06354 vs. TrEMBL
Match: tr|A0A1S3AWI3|A0A1S3AWI3_CUCME (Cyclin OS=Cucumis melo OX=3656 GN=LOC103483393 PE=3 SV=1) HSP 1 Score: 384.8 bits (987), Expect = 1.2e-103 Identity = 192/211 (91.00%), Postives = 203/211 (96.21%), Query Frame = 0
BLAST of Carg06354 vs. TrEMBL
Match: tr|A0A0A0L3W4|A0A0A0L3W4_CUCSA (Cyclin OS=Cucumis sativus OX=3659 GN=Csa_3G127030 PE=3 SV=1) HSP 1 Score: 381.7 bits (979), Expect = 1.0e-102 Identity = 192/211 (91.00%), Postives = 202/211 (95.73%), Query Frame = 0
BLAST of Carg06354 vs. TrEMBL
Match: tr|B9SKL0|B9SKL0_RICCO (Cyclin OS=Ricinus communis OX=3988 GN=RCOM_0658420 PE=3 SV=1) HSP 1 Score: 319.3 bits (817), Expect = 6.4e-84 Identity = 159/207 (76.81%), Postives = 178/207 (85.99%), Query Frame = 0
BLAST of Carg06354 vs. TrEMBL
Match: tr|A0A067JY35|A0A067JY35_JATCU (Cyclin OS=Jatropha curcas OX=180498 GN=JCGZ_14652 PE=3 SV=1) HSP 1 Score: 311.2 bits (796), Expect = 1.7e-81 Identity = 160/210 (76.19%), Postives = 175/210 (83.33%), Query Frame = 0
BLAST of Carg06354 vs. TrEMBL
Match: tr|A0A061DVS9|A0A061DVS9_THECC (Cyclin OS=Theobroma cacao OX=3641 GN=TCM_005750 PE=3 SV=1) HSP 1 Score: 308.9 bits (790), Expect = 8.6e-81 Identity = 156/209 (74.64%), Postives = 175/209 (83.73%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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