Carg06173 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg06173
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Transmembrane emp24 domain-containing protein
Location	Cucurbita_argyrosperma_scaffold_016 : 102387 .. 105294 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGGAAAAAGAAAACCGAGAAGGCAAGAAAATGGAAAGGAGGCTGAGAGAGACGGGATTCGGATATCTGTTGGCGGGTCTTCTTCTGGTGAGCCTATTCACCGGAATCGATTCAATTTCGGTCACTGTGAACGAGCTTGAATGCGTTTATGAGTACGTTTTGTACGAAGGCGACACTGTTTCTGGAAATTTTGTGGTGGTCGATCATGATATTTTCTGGGGCGCCGATCATCCCGGCATTGATTTCTCTGTAAATTCCTATCTTTTCTATCTTCAATCTGTTATTGTGTTTATGTTTGCATGTAGATGGATTTCATTACTGCCGATTTGTTGGTTGTGCTCGATTAAGATTGGATCTTAGATCGGGGGATCTTGGGATAGTGGGAGAGGGTTTAGTTTTTAATTTCTGATATTTCTGGGAAATTTTATTATCTTTGTTATGAAATTGGCGTGGGAAAGAATGTGAGAGCTTGTGTGTTGATTTTGACTTTTTAAAACACAGTGGAAAATTTTGCCTTTTGTTAATTCGACGTCTAGGGTTCGTTTGTTTGAAATTATGGCTTTGAGAGATGATATGTTAGATTGATAATTGGATTCTTTATCTTGTGAGCTGCGAGACGATTGCGTTATTGAACAGTTTCTGATCAATAGATCCACAATTATAAGCCCCTTTTCGAGCCTGAGCGGACTGATACCCTGTAGTTTTCTTCGTTTTTGAAATTGTATGGTTCAATTGTTCATGGTTTGTAGCATTGGCGATCTCTTTCTCCCCTTTGTTAAAATTTTTGTTTTTGTAATAACTACGACGAGTCAGGATTCTCAACTCAATTCCTTAGGTTTACTTGGTTATTGAGCGCATCTTCACAAAAGGGTTTCTAAAACGGTGGTTCAAACAATGTTTAGGAAAGTTGATGAGTTGCATTGTTGTTGTTCTTCTTCTTCTTCTTTTAATCTATGTGAAGCTACTTGTGTTCTTTCATTGTTTATGGTTGGCTGAACATTGGGGTACCTGGAATTTCTTGTCTGATTGTTTTATATCGATGATAAAATGCTGTTTGAAGATATCCTTATGTCGGTTATTTACGTGCAGGTTACATCTCCCGCAGGTAATGTGGTTCATTCCTTGAAGGAGACCTCTGGCGACAAGTTTGAGTTTAAGGCTCCTCGTAGTGGAATGTATAAATTCTGTTTTCATAATCCTTACTCGACTCCCGAGACTGTTTCTTTCTACATCCATGTGGGTCACATTCCGAACGAACATGATCTTGCTAAAGATGGTAATTGATTAACTTCTGCATTGCTAAAGTCTTGGTTGCCTGTGAGAAGTTAACACATTTCTCTTCTCACCTTGTTTTGGTCACTTCTTGCAGAACACCTAGACCCTATAAATGTTAAGATTGCTGAGCTTAGAGAGGCATTGGAGTCGGTCACTGCTGAGCAGAAATATTTGAAAGCACGTGATGCCCGCCACCGTCACAGTATGTGGTTTATTTTTACGCATGGTTTTGGTTTTACGAATTCGTTTGTTTATGCCATGTTTGGGAATTCTTGCTAGCAAATGTTGAAAACGCGGGCATTATATTGAAATCACTTTTCTTTTTTATTACTAGTCTAATATTAATGTAGAGGCATAGGCAACTCACAAGCTCTCACATAATAAAATCGCAATCTGCCTTCATTTTACCACATTTTTAGGCTTGTTTTTGTATGCCCTAGCGCACCCCACCCCCCCCAAAAAAAAAAAAAAAAAACAAAATTTGATGTGAATCATTTGCGGTTAACCGAATGTCAGAATGTTAGCTTTCTGAACGTAAATGTGTGAGATTATTACTATAGCTGAACAAAGAAAGCTTGAATTTTTTAGTTCGAATTCGTGAAATGTCTTTTTTCCCATCTTCATTGTATACGAATATAGCAGTCCACACGTCAAGACTCGTGATGAAATTGGCTCTACAGTTGAGGGAGCAACAAAAGAATCTTAAATTTATTCTAGCCTATCTACTTAAGTTTTTGAATTGATTTATGGGTGATTCTATGACACACAAAAGATTTTGGTAATCTTTTTGCTACCTTTTCCTTACGCCATTGTTGCGATCAAGTTGATAACTTATTGTTTTCCTTTTGATGCAGCGAACGAAAGCACAAGAAAGCGCGTAATTTTCTATACAGTGGGAGAGTATTTGTTGCTTGCTGTTGCAAGTGGGCTACAGGTCGTTTACATTCGTCGGCTGTTCAGTAAGTCAGTTGCATATAACCGGGTGTGAGCAATCCTAGTGATAAAGTTGTTGCTTCTGTGTTAGGTTTCAGGAACCTTAGGAATGAGTTATAGACAATTATTCGTTGAAAAAGTTAACATTGAGTATATTATATAATCACTTTTGACCATTCTACAGTTTTAAATTTTAATAAGTTGGTTATATGTTCATGAGTTATCTATATTCTTTAAGTTAAGGAAAAACCATTTTCCCTATGCATCTGGGAAAGGATGTTTGCGACTCCAGATGACATCCTCATTGCCCTTCTTTTGTTTAGAGCAATAACAGCACTCAAGCTAAAGGACATGAATTTACTGCATATTTGATGGTTGGGGCATAACTCTCGAGTAACGAGGATTAGACCCTAATTACTGTTTCAAAAGTTTCGAGTCAAAGCCATCGGTATCCCTACCTTTTGTGTCTTTGCTTACTGTAGAATACCAAATGTAACCAACTTGAGTGGAGCTACTAGATTTTGGAAGAGGAAGTCATTCATAACTTTAAAATATTTCTCATAGTTGGTTAAAGGGATCCTTGAGATCTCCCCTCAATTGGGGAGGAAGGGGAGGAGGAGGAGACATTATTTATAAGGATAAGGATGTGGAAACTTCTTCCTAGTAGATAAAACCTGAAGGAAAGGGAAAGGAAAAGTCTA

mRNA sequence

AGGAAAAAGAAAACCGAGAAGGCAAGAAAATGGAAAGGAGGCTGAGAGAGACGGGATTCGGATATCTGTTGGCGGGTCTTCTTCTGGTGAGCCTATTCACCGGAATCGATTCAATTTCGGTCACTGTGAACGAGCTTGAATGCGTTTATGAGTACGTTTTGTACGAAGGCGACACTGTTTCTGGAAATTTTGTGGTGGTCGATCATGATATTTTCTGGGGCGCCGATCATCCCGGCATTGATTTCTCTGTTACATCTCCCGCAGGTAATGTGGTTCATTCCTTGAAGGAGACCTCTGGCGACAAGTTTGAGTTTAAGGCTCCTCGTAGTGGAATGTATAAATTCTGTTTTCATAATCCTTACTCGACTCCCGAGACTGTTTCTTTCTACATCCATGTGGGTCACATTCCGAACGAACATGATCTTGCTAAAGATGAACACCTAGACCCTATAAATGTTAAGATTGCTGAGCTTAGAGAGGCATTGGAGTCGGTCACTGCTGAGCAGAAATATTTGAAAGCACGTGATGCCCGCCACCGTCACACGAACGAAAGCACAAGAAAGCGCGTAATTTTCTATACAGTGGGAGAGTATTTGTTGCTTGCTGTTGCAAGTGGGCTACAGGTCGTTTACATTCGTCGGCTGTTCAGTAAGTCAGTTGCATATAACCGGGTGTGAGCAATCCTAGTGATAAAGTTGTTGCTTCTGTGTTAGGTTTCAGGAACCTTAGGAATGAGTTATAGACAATTATTCGTTGAAAAAGTTAACATTGAGTATATTATATAATCACTTTTGACCATTCTACAGTTTTAAATTTTAATAAGTTGGTTATATGTTCATGAGTTATCTATATTCTTTAAGTTAAGGAAAAACCATTTTCCCTATGCATCTGGGAAAGGATGTTTGCGACTCCAGATGACATCCTCATTGCCCTTCTTTTGTTTAGAGCAATAACAGCACTCAAGCTAAAGGACATGAATTTACTGCATATTTGATGGTTGGGGCATAACTCTCGAGTAACGAGGATTAGACCCTAATTACTGTTTCAAAAGTTTCGAGTCAAAGCCATCGGTATCCCTACCTTTTGTGTCTTTGCTTACTGTAGAATACCAAATGTAACCAACTTGAGTGGAGCTACTAGATTTTGGAAGAGGAAGTCATTCATAACTTTAAAATATTTCTCATAGTTGGTTAAAGGGATCCTTGAGATCTCCCCTCAATTGGGGAGGAAGGGGAGGAGGAGGAGACATTATTTATAAGGATAAGGATGTGGAAACTTCTTCCTAGTAGATAAAACCTGAAGGAAAGGGAAAGGAAAAGTCTA

Coding sequence (CDS)

ATGGAAAGGAGGCTGAGAGAGACGGGATTCGGATATCTGTTGGCGGGTCTTCTTCTGGTGAGCCTATTCACCGGAATCGATTCAATTTCGGTCACTGTGAACGAGCTTGAATGCGTTTATGAGTACGTTTTGTACGAAGGCGACACTGTTTCTGGAAATTTTGTGGTGGTCGATCATGATATTTTCTGGGGCGCCGATCATCCCGGCATTGATTTCTCTGTTACATCTCCCGCAGGTAATGTGGTTCATTCCTTGAAGGAGACCTCTGGCGACAAGTTTGAGTTTAAGGCTCCTCGTAGTGGAATGTATAAATTCTGTTTTCATAATCCTTACTCGACTCCCGAGACTGTTTCTTTCTACATCCATGTGGGTCACATTCCGAACGAACATGATCTTGCTAAAGATGAACACCTAGACCCTATAAATGTTAAGATTGCTGAGCTTAGAGAGGCATTGGAGTCGGTCACTGCTGAGCAGAAATATTTGAAAGCACGTGATGCCCGCCACCGTCACACGAACGAAAGCACAAGAAAGCGCGTAATTTTCTATACAGTGGGAGAGTATTTGTTGCTTGCTGTTGCAAGTGGGCTACAGGTCGTTTACATTCGTCGGCTGTTCAGTAAGTCAGTTGCATATAACCGGGTGTGA

Protein sequence

MERRLRETGFGYLLAGLLLVSLFTGIDSISVTVNELECVYEYVLYEGDTVSGNFVVVDHDIFWGADHPGIDFSVTSPAGNVVHSLKETSGDKFEFKAPRSGMYKFCFHNPYSTPETVSFYIHVGHIPNEHDLAKDEHLDPINVKIAELREALESVTAEQKYLKARDARHRHTNESTRKRVIFYTVGEYLLLAVASGLQVVYIRRLFSKSVAYNRV

Homology

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BLAST of Carg06173 vs. NCBI nr
Match: XP_022939384.1 (transmembrane emp24 domain-containing protein p24beta3-like [Cucurbita moschata])

HSP 1 Score: 431.0 bits (1107), Expect = 2.3e-117
Identity = 215/215 (100.00%), Postives = 215/215 (100.00%), Query Frame = 0


Query: 1   MERRLRETGFGYLLAGLLLVSLFTGIDSISVTVNELECVYEYVLYEGDTVSGNFVVVDHD 60
           MERRLRETGFGYLLAGLLLVSLFTGIDSISVTVNELECVYEYVLYEGDTVSGNFVVVDHD
Sbjct: 1   MERRLRETGFGYLLAGLLLVSLFTGIDSISVTVNELECVYEYVLYEGDTVSGNFVVVDHD 60

Query: 61  IFWGADHPGIDFSVTSPAGNVVHSLKETSGDKFEFKAPRSGMYKFCFHNPYSTPETVSFY 120
           IFWGADHPGIDFSVTSPAGNVVHSLKETSGDKFEFKAPRSGMYKFCFHNPYSTPETVSFY
Sbjct: 61  IFWGADHPGIDFSVTSPAGNVVHSLKETSGDKFEFKAPRSGMYKFCFHNPYSTPETVSFY 120

Query: 121 IHVGHIPNEHDLAKDEHLDPINVKIAELREALESVTAEQKYLKARDARHRHTNESTRKRV 180
           IHVGHIPNEHDLAKDEHLDPINVKIAELREALESVTAEQKYLKARDARHRHTNESTRKRV
Sbjct: 121 IHVGHIPNEHDLAKDEHLDPINVKIAELREALESVTAEQKYLKARDARHRHTNESTRKRV 180

Query: 181 IFYTVGEYLLLAVASGLQVVYIRRLFSKSVAYNRV 216
           IFYTVGEYLLLAVASGLQVVYIRRLFSKSVAYNRV
Sbjct: 181 IFYTVGEYLLLAVASGLQVVYIRRLFSKSVAYNRV 215

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BLAST of Carg06173 vs. NCBI nr
Match: XP_023538709.1 (transmembrane emp24 domain-containing protein p24beta3-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 427.6 bits (1098), Expect = 2.6e-116
Identity = 213/215 (99.07%), Postives = 213/215 (99.07%), Query Frame = 0


Query: 1   MERRLRETGFGYLLAGLLLVSLFTGIDSISVTVNELECVYEYVLYEGDTVSGNFVVVDHD 60
           MERRLRETGFGYLLAGLLL SLF GIDSISVTVNELECVYEYVLYEGDTVSGNFVVVDHD
Sbjct: 1   MERRLRETGFGYLLAGLLLASLFAGIDSISVTVNELECVYEYVLYEGDTVSGNFVVVDHD 60

Query: 61  IFWGADHPGIDFSVTSPAGNVVHSLKETSGDKFEFKAPRSGMYKFCFHNPYSTPETVSFY 120
           IFWGADHPGIDFSVTSPAGNVVHSLKETSGDKFEFKAPRSGMYKFCFHNPYSTPETVSFY
Sbjct: 61  IFWGADHPGIDFSVTSPAGNVVHSLKETSGDKFEFKAPRSGMYKFCFHNPYSTPETVSFY 120

Query: 121 IHVGHIPNEHDLAKDEHLDPINVKIAELREALESVTAEQKYLKARDARHRHTNESTRKRV 180
           IHVGHIPNEHDLAKDEHLDPINVKIAELREALESVTAEQKYLKARDARHRHTNESTRKRV
Sbjct: 121 IHVGHIPNEHDLAKDEHLDPINVKIAELREALESVTAEQKYLKARDARHRHTNESTRKRV 180

Query: 181 IFYTVGEYLLLAVASGLQVVYIRRLFSKSVAYNRV 216
           IFYTVGEYLLLAVASGLQVVYIRRLFSKSVAYNRV
Sbjct: 181 IFYTVGEYLLLAVASGLQVVYIRRLFSKSVAYNRV 215

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BLAST of Carg06173 vs. NCBI nr
Match: XP_022974395.1 (transmembrane emp24 domain-containing protein p24beta3-like [Cucurbita maxima])

HSP 1 Score: 426.0 bits (1094), Expect = 7.5e-116
Identity = 213/215 (99.07%), Postives = 213/215 (99.07%), Query Frame = 0


Query: 1   MERRLRETGFGYLLAGLLLVSLFTGIDSISVTVNELECVYEYVLYEGDTVSGNFVVVDHD 60
           MERRLRETG GYLLAGLLLVSLF GIDSISVTVNELECVYEYVLYEGDTVSGNFVVVDHD
Sbjct: 1   MERRLRETGCGYLLAGLLLVSLFAGIDSISVTVNELECVYEYVLYEGDTVSGNFVVVDHD 60

Query: 61  IFWGADHPGIDFSVTSPAGNVVHSLKETSGDKFEFKAPRSGMYKFCFHNPYSTPETVSFY 120
           IFWGADHPGIDFSVTSPAGNVVHSLKETSGDKFEFKAPRSGMYKFCFHNPYSTPETVSFY
Sbjct: 61  IFWGADHPGIDFSVTSPAGNVVHSLKETSGDKFEFKAPRSGMYKFCFHNPYSTPETVSFY 120

Query: 121 IHVGHIPNEHDLAKDEHLDPINVKIAELREALESVTAEQKYLKARDARHRHTNESTRKRV 180
           IHVGHIPNEHDLAKDEHLDPINVKIAELREALESVTAEQKYLKARDARHRHTNESTRKRV
Sbjct: 121 IHVGHIPNEHDLAKDEHLDPINVKIAELREALESVTAEQKYLKARDARHRHTNESTRKRV 180

Query: 181 IFYTVGEYLLLAVASGLQVVYIRRLFSKSVAYNRV 216
           IFYTVGEYLLLAVASGLQVVYIRRLFSKSVAYNRV
Sbjct: 181 IFYTVGEYLLLAVASGLQVVYIRRLFSKSVAYNRV 215

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BLAST of Carg06173 vs. NCBI nr
Match: XP_008438614.1 (PREDICTED: transmembrane emp24 domain-containing protein p24beta3 [Cucumis melo])

HSP 1 Score: 408.3 bits (1048), Expect = 1.6e-110
Identity = 202/215 (93.95%), Postives = 209/215 (97.21%), Query Frame = 0


Query: 1   MERRLRETGFGYLLAGLLLVSLFTGIDSISVTVNELECVYEYVLYEGDTVSGNFVVVDHD 60
           MERR+RE G GYLLA LLL+SL  GIDSISVTVNE+ECVYEYVLYEGD+VSGNFVVVDHD
Sbjct: 1   MERRVREKGLGYLLAALLLLSLIAGIDSISVTVNEIECVYEYVLYEGDSVSGNFVVVDHD 60

Query: 61  IFWGADHPGIDFSVTSPAGNVVHSLKETSGDKFEFKAPRSGMYKFCFHNPYSTPETVSFY 120
           IFWGADHPGIDF+VTSPAGNVVHSLKETSGDKFEFKAPRSGMYKFCFHNPYSTPETVSFY
Sbjct: 61  IFWGADHPGIDFTVTSPAGNVVHSLKETSGDKFEFKAPRSGMYKFCFHNPYSTPETVSFY 120

Query: 121 IHVGHIPNEHDLAKDEHLDPINVKIAELREALESVTAEQKYLKARDARHRHTNESTRKRV 180
           IHVGHIPNE+D AKDEHLDPINVKIAELREALESVTAEQKYLKARDARHRHTNESTRKRV
Sbjct: 121 IHVGHIPNENDHAKDEHLDPINVKIAELREALESVTAEQKYLKARDARHRHTNESTRKRV 180

Query: 181 IFYTVGEYLLLAVASGLQVVYIRRLFSKSVAYNRV 216
           IFYTVGEYLLLAVASGLQV+YIRRLFSKSVAYNRV
Sbjct: 181 IFYTVGEYLLLAVASGLQVIYIRRLFSKSVAYNRV 215

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BLAST of Carg06173 vs. NCBI nr
Match: XP_022138285.1 (transmembrane emp24 domain-containing protein p24beta3 [Momordica charantia])

HSP 1 Score: 405.2 bits (1040), Expect = 1.4e-109
Identity = 203/217 (93.55%), Postives = 207/217 (95.39%), Query Frame = 0


Query: 1   MER--RLRETGFGYLLAGLLLVSLFTGIDSISVTVNELECVYEYVLYEGDTVSGNFVVVD 60
           MER  R RE  FGYLLAGLLLVSL  GIDSISVTVNE+ECVYEYVLYEGDTVSGNFVVVD
Sbjct: 1   MERRQRQRERRFGYLLAGLLLVSLIAGIDSISVTVNEIECVYEYVLYEGDTVSGNFVVVD 60

Query: 61  HDIFWGADHPGIDFSVTSPAGNVVHSLKETSGDKFEFKAPRSGMYKFCFHNPYSTPETVS 120
           HDIFWGADHPGIDF+VTSPAGNVVHSLKETSGDKFEFKAPRSGMYKFCFHNPYSTPETVS
Sbjct: 61  HDIFWGADHPGIDFTVTSPAGNVVHSLKETSGDKFEFKAPRSGMYKFCFHNPYSTPETVS 120

Query: 121 FYIHVGHIPNEHDLAKDEHLDPINVKIAELREALESVTAEQKYLKARDARHRHTNESTRK 180
           F+IHVGHIPNEHDLAKDEHLDPINVKIAELREALESVTAEQKYLKARD RHRHTNESTRK
Sbjct: 121 FHIHVGHIPNEHDLAKDEHLDPINVKIAELREALESVTAEQKYLKARDTRHRHTNESTRK 180

Query: 181 RVIFYTVGEYLLLAVASGLQVVYIRRLFSKSVAYNRV 216
           RVIFYTVGEYLLLAV SGLQV+YIRRLFSKSV YNRV
Sbjct: 181 RVIFYTVGEYLLLAVVSGLQVIYIRRLFSKSVGYNRV 217

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BLAST of Carg06173 vs. TAIR10
Match: AT3G22845.1 (emp24/gp25L/p24 family/GOLD family protein)

HSP 1 Score: 360.9 bits (925), Expect = 5.4e-100
Identity = 177/215 (82.33%), Postives = 195/215 (90.70%), Query Frame = 0


Query: 1   MERRLRETGFGYLLAGLLLVSLFTGIDSISVTVNELECVYEYVLYEGDTVSGNFVVVDHD 60
           MERR  +    ++L GL+L++    I S+SVTVN+ ECV EYVLYEGDTVSGNFVVVDHD
Sbjct: 1   MERRQAKIHV-FVLIGLILLNSINQISSLSVTVNDEECVQEYVLYEGDTVSGNFVVVDHD 60

Query: 61  IFWGADHPGIDFSVTSPAGNVVHSLKETSGDKFEFKAPRSGMYKFCFHNPYSTPETVSFY 120
           IFWG+DHPG+DF+VTSPAGN+V +LK TSGDKFEFKAP+SGMYKFCFHNPYSTPETVSFY
Sbjct: 61  IFWGSDHPGLDFTVTSPAGNIVQTLKGTSGDKFEFKAPKSGMYKFCFHNPYSTPETVSFY 120

Query: 121 IHVGHIPNEHDLAKDEHLDPINVKIAELREALESVTAEQKYLKARDARHRHTNESTRKRV 180
           IHVGHIPNEHDLAKDEHLDP+NVKIAELREALESV AEQKYLKARD RHRHTNESTRKRV
Sbjct: 121 IHVGHIPNEHDLAKDEHLDPVNVKIAELREALESVVAEQKYLKARDTRHRHTNESTRKRV 180

Query: 181 IFYTVGEYLLLAVASGLQVVYIRRLFSKSVAYNRV 216
           IFYTVGEY+ LA ASGLQV+YIR+LFSKSVAYNRV
Sbjct: 181 IFYTVGEYIFLAAASGLQVLYIRKLFSKSVAYNRV 214

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BLAST of Carg06173 vs. TAIR10
Match: AT3G07680.1 (emp24/gp25L/p24 family/GOLD family protein)

HSP 1 Score: 119.0 bits (297), Expect = 3.6e-27
Identity = 70/203 (34.48%), Postives = 104/203 (51.23%), Query Frame = 0


Query: 13  LLAGLLLVSLFTGIDSISVTVNELECVYEYVLYEGDTVSGNFVVVDHDIFWGADHPGIDF 72
           +L GLL    F     I   ++  EC      YEGDT+  +FVV+  D  W  +  G+D 
Sbjct: 8   VLLGLLW--SFQATLGIRFVIDREECFSHKAEYEGDTLHVSFVVIKSDSQWHFNEDGVDL 67

Query: 73  SVTSPAGNVVHSLKETSGDKFEFKAPRSGMYKFCFHNPYSTPETVSFYIHVGHIPNEHDL 132
            +  P G  +H  +E    K +F   + G+Y+FCF N     ET+ F + +GH       
Sbjct: 68  VIHGPTGEQIHDFREQISAKHDFVVQKKGVYRFCFTNKSPYHETIDFDVQLGHFAYYDQH 127

Query: 133 AKDEHLDPINVKIAELREALESVTAEQKYLKARDARHRHTNESTRKRVIFYTVGEYLLLA 192
           AKDEH  P+  +I++L EAL ++  EQ +L+A+  R    NE+  KR +   + E   L 
Sbjct: 128 AKDEHFTPLMEQISKLEEALYNIQFEQHWLEAQTDRQAIVNENMSKRAVHKALFESFALI 187

Query: 193 VASGLQVVYIRRLFSKSVAYNRV 216
            AS LQV  +RRLF + +  +RV
Sbjct: 188 GASFLQVYLLRRLFERKLGMSRV 208

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BLAST of Carg06173 vs. TAIR10
Match: AT1G57620.1 (emp24/gp25L/p24 family/GOLD family protein)

HSP 1 Score: 74.3 bits (181), Expect = 1.0e-13
Identity = 56/205 (27.32%), Postives = 102/205 (49.76%), Query Frame = 0


Query: 13  LLAGLLLVSLFTGIDSISVTVNEL--ECVYEYVLYEGDTVSGNFVVV--DHDIFWGADHP 72
           +L   L+ SL    +++ +TV     +CV E +      V  +++V+  +H IF     P
Sbjct: 10  ILLSALIFSLSPICEAVWLTVPHTGSKCVSEEI-QSNVIVLADYLVISEEHSIF-----P 69

Query: 73  GIDFSVTSPAGNVVHSLKETSGDKFEFKAPRSGMYKFCFHNPYSTPETVSFYIHV----G 132
            +   VT+P G V+H  + T+  +F F    SG Y  CF     +     F I++    G
Sbjct: 70  TVSVKVTAPYGTVLHHRENTTNGQFAFTTQESGTYLACFEADAKSHGNKDFSINIDWKTG 129

Query: 133 HIPNEHD-LAKDEHLDPINVKIAELREALESVTAEQKYLKARDARHRHTNESTRKRVIFY 192
               + D +A+ E ++ + ++  +L  A+E++     YL+ R+A  R  +E T  RV +Y
Sbjct: 130 IAAKDWDSIARKEKIEGVELEFKKLEGAVEAIHENLIYLRNREAEMRIVSEKTNSRVAWY 189

Query: 193 TVGEYLLLAVASGLQVVYIRRLFSK 209
           ++    +  V SGLQ++Y+++ F K
Sbjct: 190 SIMSLGICIVVSGLQILYLKQYFEK 208

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BLAST of Carg06173 vs. Swiss-Prot
Match: sp|Q9LIL4|P24B3_ARATH (Transmembrane emp24 domain-containing protein p24beta3 OS=Arabidopsis thaliana OX=3702 GN=At3g22845 PE=2 SV=1)

HSP 1 Score: 360.9 bits (925), Expect = 9.7e-99
Identity = 177/215 (82.33%), Postives = 195/215 (90.70%), Query Frame = 0


Query: 1   MERRLRETGFGYLLAGLLLVSLFTGIDSISVTVNELECVYEYVLYEGDTVSGNFVVVDHD 60
           MERR  +    ++L GL+L++    I S+SVTVN+ ECV EYVLYEGDTVSGNFVVVDHD
Sbjct: 1   MERRQAKIHV-FVLIGLILLNSINQISSLSVTVNDEECVQEYVLYEGDTVSGNFVVVDHD 60

Query: 61  IFWGADHPGIDFSVTSPAGNVVHSLKETSGDKFEFKAPRSGMYKFCFHNPYSTPETVSFY 120
           IFWG+DHPG+DF+VTSPAGN+V +LK TSGDKFEFKAP+SGMYKFCFHNPYSTPETVSFY
Sbjct: 61  IFWGSDHPGLDFTVTSPAGNIVQTLKGTSGDKFEFKAPKSGMYKFCFHNPYSTPETVSFY 120

Query: 121 IHVGHIPNEHDLAKDEHLDPINVKIAELREALESVTAEQKYLKARDARHRHTNESTRKRV 180
           IHVGHIPNEHDLAKDEHLDP+NVKIAELREALESV AEQKYLKARD RHRHTNESTRKRV
Sbjct: 121 IHVGHIPNEHDLAKDEHLDPVNVKIAELREALESVVAEQKYLKARDTRHRHTNESTRKRV 180

Query: 181 IFYTVGEYLLLAVASGLQVVYIRRLFSKSVAYNRV 216
           IFYTVGEY+ LA ASGLQV+YIR+LFSKSVAYNRV
Sbjct: 181 IFYTVGEYIFLAAASGLQVLYIRKLFSKSVAYNRV 214

[Close]

BLAST of Carg06173 vs. Swiss-Prot
Match: sp|Q9S7M9|P24B2_ARATH (Transmembrane emp24 domain-containing protein p24beta2 OS=Arabidopsis thaliana OX=3702 GN=At3g07680 PE=1 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 6.4e-26
Identity = 70/203 (34.48%), Postives = 104/203 (51.23%), Query Frame = 0


Query: 13  LLAGLLLVSLFTGIDSISVTVNELECVYEYVLYEGDTVSGNFVVVDHDIFWGADHPGIDF 72
           +L GLL    F     I   ++  EC      YEGDT+  +FVV+  D  W  +  G+D 
Sbjct: 8   VLLGLLW--SFQATLGIRFVIDREECFSHKAEYEGDTLHVSFVVIKSDSQWHFNEDGVDL 67

Query: 73  SVTSPAGNVVHSLKETSGDKFEFKAPRSGMYKFCFHNPYSTPETVSFYIHVGHIPNEHDL 132
            +  P G  +H  +E    K +F   + G+Y+FCF N     ET+ F + +GH       
Sbjct: 68  VIHGPTGEQIHDFREQISAKHDFVVQKKGVYRFCFTNKSPYHETIDFDVQLGHFAYYDQH 127

Query: 133 AKDEHLDPINVKIAELREALESVTAEQKYLKARDARHRHTNESTRKRVIFYTVGEYLLLA 192
           AKDEH  P+  +I++L EAL ++  EQ +L+A+  R    NE+  KR +   + E   L 
Sbjct: 128 AKDEHFTPLMEQISKLEEALYNIQFEQHWLEAQTDRQAIVNENMSKRAVHKALFESFALI 187

Query: 193 VASGLQVVYIRRLFSKSVAYNRV 216
            AS LQV  +RRLF + +  +RV
Sbjct: 188 GASFLQVYLLRRLFERKLGMSRV 208

[Close]

BLAST of Carg06173 vs. Swiss-Prot
Match: sp|Q769F9|TMEDA_DICDI (Transmembrane emp24 domain-containing protein A OS=Dictyostelium discoideum OX=44689 GN=empA PE=3 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 1.1e-17
Identity = 67/198 (33.84%), Postives = 105/198 (53.03%), Query Frame = 0


Query: 13  LLAGLLLVSLFTGIDSIS--VTVNELECVYEYVLYEGDTVSGNFVVVDHDIFWGADHPGI 72
           L+  LL ++  + ++S S  V+    EC+YE +      V  +F  +   I  G +   I
Sbjct: 9   LVIALLCIASNSIVESFSFKVSAKVEECIYEEI-----GVDLSFTAMFQVIQGGFN--DI 68

Query: 73  DFSVTSPAGNVVHSLKETSGDKFEFKAPRSGMYKFCFHNPYS--TPETVSFYIHVGHIPN 132
           DF++ SP   +V+S +  S      ++  +G+Y FCF N  S  T +TVSF + VG    
Sbjct: 69  DFTIISPDKRIVYSGQRESEGTKTLRSSFAGVYSFCFSNKMSSLTDKTVSFILSVGESSP 128

Query: 133 EHDLAKDEHLDPINVKIAELREALESVTAEQKYLKARDARHRHTNESTRKRVIFYTVGEY 192
             ++AK + L PI   I  L + + +V  EQ Y K R+A HR+T EST  RV++++V E 
Sbjct: 129 IREIAKKKDLTPIERSIMTLSDGVIAVKNEQNYFKMREAAHRNTAESTNSRVLWWSVFEA 188

Query: 193 LLLAVASGLQVVYIRRLF 207
            +L   S  Q+ Y+RR F
Sbjct: 189 FVLIALSIWQIYYLRRFF 199

[Close]

BLAST of Carg06173 vs. Swiss-Prot
Match: sp|P49020|TMED2_CRIGR (Transmembrane emp24 domain-containing protein 2 (Fragment) OS=Cricetulus griseus OX=10029 GN=TMED2 PE=1 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 7.9e-16
Identity = 55/180 (30.56%), Postives = 89/180 (49.44%), Query Frame = 0


Query: 29  ISVTVNELECVYEYVLYEGDTVSGNFVVVDHDIFWGADHPGIDFSVTSPAGNVVHSLKET 88
           +S+  +  EC +E V       SG  + +  ++  G     ID  +T P    ++     
Sbjct: 18  VSIDAHAEECFFERV------TSGTKMGLIFEVAEGG-FLDIDVEITGPDNKGIYKGDRE 77

Query: 89  SGDKFEFKAPRSGMYKFCFHNPYS--TPETVSFYIHVGHIPNEHDLAKDEHLDPINVKIA 148
           S  K+ F A   G YKFCF N  S  TP+ V F I +G  P   D+  + H + +   I 
Sbjct: 78  SSGKYTFAAHMDGTYKFCFSNRMSTMTPKIVMFTIDIGEAPKGQDMETEAHQNKLEEMIN 137

Query: 149 ELREALESVTAEQKYLKARDARHRHTNESTRKRVIFYTVGEYLLLAVASGLQVVYIRRLF 207
           EL  A+ +V  EQ+Y++ R+  HR  N++T  RV+ ++  E L+L   +  Q+ Y++R F
Sbjct: 138 ELAVAMTAVKHEQEYMEVRERIHRAINDNTNSRVVLWSFFEALVLVAMTLGQIYYLKRFF 190

[Close]

BLAST of Carg06173 vs. Swiss-Prot
Match: sp|Q15363|TMED2_HUMAN (Transmembrane emp24 domain-containing protein 2 OS=Homo sapiens OX=9606 GN=TMED2 PE=1 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 7.9e-16
Identity = 58/194 (29.90%), Postives = 95/194 (48.97%), Query Frame = 0


Query: 17  LLLVSLFTGIDS--ISVTVNELECVYEYVLYEGDTVSGNFVVVDHDIFWGADHPGIDFSV 76
           +LL +L   +    +S+  +  EC +E V       SG  + +  ++  G     ID  +
Sbjct: 9   VLLAALLATVSGYFVSIDAHAEECFFERV------TSGTKMGLIFEVAEGG-FLDIDVEI 68

Query: 77  TSPAGNVVHSLKETSGDKFEFKAPRSGMYKFCFHNPYS--TPETVSFYIHVGHIPNEHDL 136
           T P    ++     S  K+ F A   G YKFCF N  S  TP+ V F I +G  P   D+
Sbjct: 69  TGPDNKGIYKGDRESSGKYTFAAHMDGTYKFCFSNRMSTMTPKIVMFTIDIGEAPKGQDM 128

Query: 137 AKDEHLDPINVKIAELREALESVTAEQKYLKARDARHRHTNESTRKRVIFYTVGEYLLLA 196
             + H + +   I EL  A+ +V  EQ+Y++ R+  HR  N++T  RV+ ++  E L+L 
Sbjct: 129 ETEAHQNKLEEMINELAVAMTAVKHEQEYMEVRERIHRAINDNTNSRVVLWSFFEALVLV 188

Query: 197 VASGLQVVYIRRLF 207
             +  Q+ Y++R F
Sbjct: 189 AMTLGQIYYLKRFF 195

[Close]

BLAST of Carg06173 vs. TrEMBL
Match: tr|A0A1S3AWG7|A0A1S3AWG7_CUCME (transmembrane emp24 domain-containing protein p24beta3 OS=Cucumis melo OX=3656 GN=LOC103483671 PE=3 SV=1)

HSP 1 Score: 408.3 bits (1048), Expect = 1.1e-110
Identity = 202/215 (93.95%), Postives = 209/215 (97.21%), Query Frame = 0


Query: 1   MERRLRETGFGYLLAGLLLVSLFTGIDSISVTVNELECVYEYVLYEGDTVSGNFVVVDHD 60
           MERR+RE G GYLLA LLL+SL  GIDSISVTVNE+ECVYEYVLYEGD+VSGNFVVVDHD
Sbjct: 1   MERRVREKGLGYLLAALLLLSLIAGIDSISVTVNEIECVYEYVLYEGDSVSGNFVVVDHD 60

Query: 61  IFWGADHPGIDFSVTSPAGNVVHSLKETSGDKFEFKAPRSGMYKFCFHNPYSTPETVSFY 120
           IFWGADHPGIDF+VTSPAGNVVHSLKETSGDKFEFKAPRSGMYKFCFHNPYSTPETVSFY
Sbjct: 61  IFWGADHPGIDFTVTSPAGNVVHSLKETSGDKFEFKAPRSGMYKFCFHNPYSTPETVSFY 120

Query: 121 IHVGHIPNEHDLAKDEHLDPINVKIAELREALESVTAEQKYLKARDARHRHTNESTRKRV 180
           IHVGHIPNE+D AKDEHLDPINVKIAELREALESVTAEQKYLKARDARHRHTNESTRKRV
Sbjct: 121 IHVGHIPNENDHAKDEHLDPINVKIAELREALESVTAEQKYLKARDARHRHTNESTRKRV 180

Query: 181 IFYTVGEYLLLAVASGLQVVYIRRLFSKSVAYNRV 216
           IFYTVGEYLLLAVASGLQV+YIRRLFSKSVAYNRV
Sbjct: 181 IFYTVGEYLLLAVASGLQVIYIRRLFSKSVAYNRV 215

[Close]

BLAST of Carg06173 vs. TrEMBL
Match: tr|A0A0A0L4N3|A0A0A0L4N3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G145770 PE=3 SV=1)

HSP 1 Score: 402.5 bits (1033), Expect = 5.9e-109
Identity = 198/215 (92.09%), Postives = 207/215 (96.28%), Query Frame = 0


Query: 1   MERRLRETGFGYLLAGLLLVSLFTGIDSISVTVNELECVYEYVLYEGDTVSGNFVVVDHD 60
           MERR+RE G G+LLA  LL+SL  GIDSISVTVNE+ECVYEYVLYEGD+VSGNFVVVDHD
Sbjct: 1   MERRVREKGLGFLLAAFLLLSLIAGIDSISVTVNEVECVYEYVLYEGDSVSGNFVVVDHD 60

Query: 61  IFWGADHPGIDFSVTSPAGNVVHSLKETSGDKFEFKAPRSGMYKFCFHNPYSTPETVSFY 120
           IFWGADHPGI+F+VTSPAGNVVHSLKETSGDKFEFKAPRSGMYKFCFHNPYSTPETVSFY
Sbjct: 61  IFWGADHPGIEFTVTSPAGNVVHSLKETSGDKFEFKAPRSGMYKFCFHNPYSTPETVSFY 120

Query: 121 IHVGHIPNEHDLAKDEHLDPINVKIAELREALESVTAEQKYLKARDARHRHTNESTRKRV 180
           IHVGHIPNEHD AKDEHLDPINVKIAELREALESV +EQKYLKARDARHRHTNESTRKRV
Sbjct: 121 IHVGHIPNEHDHAKDEHLDPINVKIAELREALESVISEQKYLKARDARHRHTNESTRKRV 180

Query: 181 IFYTVGEYLLLAVASGLQVVYIRRLFSKSVAYNRV 216
           IFYTVGEYLLLAVASGLQV+YIRRLFSKSVAYNRV
Sbjct: 181 IFYTVGEYLLLAVASGLQVIYIRRLFSKSVAYNRV 215

[Close]

BLAST of Carg06173 vs. TrEMBL
Match: tr|A0A118K0K3|A0A118K0K3_CYNCS (GOLD-like protein OS=Cynara cardunculus var. scolymus OX=59895 GN=Ccrd_020164 PE=3 SV=1)

HSP 1 Score: 364.0 bits (933), Expect = 2.3e-97
Identity = 180/216 (83.33%), Postives = 198/216 (91.67%), Query Frame = 0


Query: 1   MERRLRETGFGYLLAGLLLVSLFTG-IDSISVTVNELECVYEYVLYEGDTVSGNFVVVDH 60
           MER  R+    Y + GLLL+S F G + ++SVTVN++ECVYEYVLYEGDTVSGNFVVVDH
Sbjct: 1   MERGERKMK-AYAVLGLLLLSTFAGDVSALSVTVNDVECVYEYVLYEGDTVSGNFVVVDH 60

Query: 61  DIFWGADHPGIDFSVTSPAGNVVHSLKETSGDKFEFKAPRSGMYKFCFHNPYSTPETVSF 120
           DIFW +DHPGIDF V+SP GNVV ++K TSG+KFEFKAPRSGMY+FCFHNPYSTPETVSF
Sbjct: 61  DIFWSSDHPGIDFIVSSPGGNVVQTMKGTSGEKFEFKAPRSGMYQFCFHNPYSTPETVSF 120

Query: 121 YIHVGHIPNEHDLAKDEHLDPINVKIAELREALESVTAEQKYLKARDARHRHTNESTRKR 180
           YIHVGHIPNEHDLAKDEHLDP+NVKIAELREALESVTAEQKYLKARDARHRHTNEST KR
Sbjct: 121 YIHVGHIPNEHDLAKDEHLDPVNVKIAELREALESVTAEQKYLKARDARHRHTNESTHKR 180

Query: 181 VIFYTVGEYLLLAVASGLQVVYIRRLFSKSVAYNRV 216
           VIFYT+GEY+LLA+ASGLQVVYIRRLFSKSVAYNRV
Sbjct: 181 VIFYTIGEYILLALASGLQVVYIRRLFSKSVAYNRV 215

[Close]

BLAST of Carg06173 vs. TrEMBL
Match: tr|A0A1R3G9A0|A0A1R3G9A0_COCAP (Emp24/gp25L/p24 family/GOLD family protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_27665 PE=3 SV=1)

HSP 1 Score: 364.0 bits (933), Expect = 2.3e-97
Identity = 181/211 (85.78%), Postives = 193/211 (91.47%), Query Frame = 0


Query: 7   ETGFGYLLA--GLLLVSLFTGIDSISVTVNELECVYEYVLYEGDTVSGNFVVVDHDIFWG 66
           E  +G +LA  GLLL++  + + S+SVTVNE+ECVYEYVLYEGDTVSGNFVVVDHDIFW 
Sbjct: 2   ENRWGKMLALMGLLLLNWVSNVSSLSVTVNEVECVYEYVLYEGDTVSGNFVVVDHDIFWS 61

Query: 67  ADHPGIDFSVTSPAGNVVHSLKETSGDKFEFKAPRSGMYKFCFHNPYSTPETVSFYIHVG 126
           +DHPGIDF VTSP GN VHSLK TSGDKFEFKAPRSGMYKFCFHNPYSTPETVSFYIHVG
Sbjct: 62  SDHPGIDFDVTSPGGNTVHSLKGTSGDKFEFKAPRSGMYKFCFHNPYSTPETVSFYIHVG 121

Query: 127 HIPNEHDLAKDEHLDPINVKIAELREALESVTAEQKYLKARDARHRHTNESTRKRVIFYT 186
           HIP EHDLAKDEHLDPINVKIAELREALESVTAEQKYLKARDARHRHTNESTRKRVI YT
Sbjct: 122 HIPTEHDLAKDEHLDPINVKIAELREALESVTAEQKYLKARDARHRHTNESTRKRVIGYT 181

Query: 187 VGEYLLLAVASGLQVVYIRRLFSKSVAYNRV 216
           V EY++LA+AS LQVVYIRRLFSKSVAYNRV
Sbjct: 182 VAEYIMLALASALQVVYIRRLFSKSVAYNRV 212

[Close]

BLAST of Carg06173 vs. TrEMBL
Match: tr|A0A087HBR6|A0A087HBR6_ARAAL (Uncharacterized protein OS=Arabis alpina OX=50452 GN=AALP_AA3G261200 PE=3 SV=1)

HSP 1 Score: 363.6 bits (932), Expect = 3.0e-97
Identity = 180/215 (83.72%), Postives = 195/215 (90.70%), Query Frame = 0


Query: 1   MERRLRETGFGYLLAGLLLVSLFTGIDSISVTVNELECVYEYVLYEGDTVSGNFVVVDHD 60
           MERR  +    ++L GL+L+S    I S+SVTVNE ECV EYVLYEGDTVSGNFVVVDHD
Sbjct: 1   MERRQAKIHV-FVLIGLILLSSIERISSLSVTVNEDECVQEYVLYEGDTVSGNFVVVDHD 60

Query: 61  IFWGADHPGIDFSVTSPAGNVVHSLKETSGDKFEFKAPRSGMYKFCFHNPYSTPETVSFY 120
           IFWG+DHPG+DF+VTSPAGN+V +LK TSGDKFEFKAPRSGMYKFCFHNPYSTPETVSFY
Sbjct: 61  IFWGSDHPGLDFTVTSPAGNIVQTLKGTSGDKFEFKAPRSGMYKFCFHNPYSTPETVSFY 120

Query: 121 IHVGHIPNEHDLAKDEHLDPINVKIAELREALESVTAEQKYLKARDARHRHTNESTRKRV 180
           IHVGHIPNEHDLAKDEHLDP+NVKIAELREALESV AEQKYLKARD RHRHTNESTRKRV
Sbjct: 121 IHVGHIPNEHDLAKDEHLDPVNVKIAELREALESVVAEQKYLKARDTRHRHTNESTRKRV 180

Query: 181 IFYTVGEYLLLAVASGLQVVYIRRLFSKSVAYNRV 216
           IFYTVGEY+ LA ASGLQV+YIR+LFSKSVAYNRV
Sbjct: 181 IFYTVGEYMFLAAASGLQVLYIRKLFSKSVAYNRV 214

The following BLAST results are available for this feature:

BLAST of Carg06173 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022939384.1	2.3e-117	100.00	transmembrane emp24 domain-containing protein p24beta3-like [Cucurbita moschata]	[more]
XP_023538709.1	2.6e-116	99.07	transmembrane emp24 domain-containing protein p24beta3-like [Cucurbita pepo subs...	[more]
XP_022974395.1	7.5e-116	99.07	transmembrane emp24 domain-containing protein p24beta3-like [Cucurbita maxima]	[more]
XP_008438614.1	1.6e-110	93.95	PREDICTED: transmembrane emp24 domain-containing protein p24beta3 [Cucumis melo]	[more]
XP_022138285.1	1.4e-109	93.55	transmembrane emp24 domain-containing protein p24beta3 [Momordica charantia]	[more]

BLAST of Carg06173 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G22845.1	5.4e-100	82.33	emp24/gp25L/p24 family/GOLD family protein	[more]
AT3G07680.1	3.6e-27	34.48	emp24/gp25L/p24 family/GOLD family protein	[more]
AT1G57620.1	1.0e-13	27.32	emp24/gp25L/p24 family/GOLD family protein	[more]

BLAST of Carg06173 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9LIL4\|P24B3_ARATH	9.7e-99	82.33	Transmembrane emp24 domain-containing protein p24beta3 OS=Arabidopsis thaliana O...	[more]
sp\|Q9S7M9\|P24B2_ARATH	6.4e-26	34.48	Transmembrane emp24 domain-containing protein p24beta2 OS=Arabidopsis thaliana O...	[more]
sp\|Q769F9\|TMEDA_DICDI	1.1e-17	33.84	Transmembrane emp24 domain-containing protein A OS=Dictyostelium discoideum OX=4...	[more]
sp\|P49020\|TMED2_CRIGR	7.9e-16	30.56	Transmembrane emp24 domain-containing protein 2 (Fragment) OS=Cricetulus griseus...	[more]
sp\|Q15363\|TMED2_HUMAN	7.9e-16	29.90	Transmembrane emp24 domain-containing protein 2 OS=Homo sapiens OX=9606 GN=TMED2...	[more]

BLAST of Carg06173 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3AWG7\|A0A1S3AWG7_CUCME	1.1e-110	93.95	transmembrane emp24 domain-containing protein p24beta3 OS=Cucumis melo OX=3656 G...	[more]
tr\|A0A0A0L4N3\|A0A0A0L4N3_CUCSA	5.9e-109	92.09	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G145770 PE=3 SV=1	[more]
tr\|A0A118K0K3\|A0A118K0K3_CYNCS	2.3e-97	83.33	GOLD-like protein OS=Cynara cardunculus var. scolymus OX=59895 GN=Ccrd_020164 PE...	[more]
tr\|A0A1R3G9A0\|A0A1R3G9A0_COCAP	2.3e-97	85.78	Emp24/gp25L/p24 family/GOLD family protein OS=Corchorus capsularis OX=210143 GN=...	[more]
tr\|A0A087HBR6\|A0A087HBR6_ARAAL	3.0e-97	83.72	Uncharacterized protein OS=Arabis alpina OX=50452 GN=AALP_AA3G261200 PE=3 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR036598	GOLD_dom_sf
IPR015720	TMP21-related
IPR009038	GOLD_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg06173-RA	Carg06173-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 145..165
None	No IPR available	PANTHER	PTHR22811:SF31	RE49489P	coord: 29..207
IPR009038	GOLD domain	SMART	SM01190	EMP24_GP25L_2	coord: 28..207 e-value: 1.3E-55 score: 200.8
IPR009038	GOLD domain	PFAM	PF01105	EMP24_GP25L	coord: 31..206 e-value: 3.4E-44 score: 150.9
IPR009038	GOLD domain	PROSITE	PS50866	GOLD	coord: 36..123 score: 16.567
IPR015720	TMP21-related	PANTHER	PTHR22811	TRANSMEMBRANE EMP24 DOMAIN-CONTAINING PROTEIN	coord: 29..207
IPR036598	GOLD domain superfamily	SUPERFAMILY	SSF101576	Supernatant protein factor (SPF), C-terminal domain	coord: 44..132

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg06173	Cla021589	Watermelon (97103) v1	carwmB0961
Carg06173	Csa3G145770	Cucumber (Chinese Long) v2	carcuB0975
Carg06173	MELO3C006498	Melon (DHL92) v3.5.1	carmeB0941
Carg06173	ClCG05G004840	Watermelon (Charleston Gray)	carwcgB0935
Carg06173	CSPI03G12750	Wild cucumber (PI 183967)	carcpiB0998
Carg06173	Cucsa.254650	Cucumber (Gy14) v1	carcgyB1077
Carg06173	CmaCh06G013680	Cucurbita maxima (Rimu)	carcmaB1325
Carg06173	CmaCh14G017480	Cucurbita maxima (Rimu)	carcmaB1320
Carg06173	CmoCh06G013810	Cucurbita moschata (Rifu)	carcmoB1288
Carg06173	CmoCh14G017850	Cucurbita moschata (Rifu)	carcmoB1284
Carg06173	Lsi05G016400	Bottle gourd (USVL1VR-Ls)	carlsiB878
Carg06173	Cp4.1LG03g10570	Cucurbita pepo (Zucchini)	carcpeB1331
Carg06173	Cp4.1LG08g03920	Cucurbita pepo (Zucchini)	carcpeB1333
Carg06173	CsGy3G012900	Cucumber (Gy14) v2	carcgybB0948
Carg06173	MELO3C006498.2	Melon (DHL92) v3.6.1	carmedB0947
Carg06173	CsaV3_3G012880	Cucumber (Chinese Long) v3	carcucB1003
Carg06173	Cla97C05G085930	Watermelon (97103) v2	carwmbB1008
Carg06173	Bhi01G000549	Wax gourd	carwgoB1119

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg06173	Carg23486	Silver-seed gourd	carcarB630

The following block(s) are covering this gene:


Gene	Organism	Block
Carg06173	Silver-seed gourd	carcarB136
Carg06173	Silver-seed gourd	carcarB266
Carg06173	Silver-seed gourd	carcarB349
Carg06173	Silver-seed gourd	carcarB610
Carg06173	Cucumber (Gy14) v2	carcgybB0945
Carg06173	Cucumber (Gy14) v1	carcgyB1081
Carg06173	Cucurbita maxima (Rimu)	carcmaB1321
Carg06173	Cucurbita maxima (Rimu)	carcmaB1327
Carg06173	Cucurbita maxima (Rimu)	carcmaB1328
Carg06173	Cucurbita moschata (Rifu)	carcmoB1285
Carg06173	Cucurbita moschata (Rifu)	carcmoB1289
Carg06173	Cucurbita moschata (Rifu)	carcmoB1290
Carg06173	Cucurbita pepo (Zucchini)	carcpeB1328
Carg06173	Cucurbita pepo (Zucchini)	carcpeB1330
Carg06173	Wild cucumber (PI 183967)	carcpiB0995
Carg06173	Cucumber (Chinese Long) v2	carcuB0974
Carg06173	Cucumber (Chinese Long) v3	carcucB1001
Carg06173	Bottle gourd (USVL1VR-Ls)	carlsiB876
Carg06173	Bottle gourd (USVL1VR-Ls)	carlsiB877
Carg06173	Melon (DHL92) v3.5.1	carmeB0940
Carg06173	Melon (DHL92) v3.6.1	carmedB0946
Carg06173	Watermelon (Charleston Gray)	carwcgB0934
Carg06173	Watermelon (Charleston Gray)	carwcgB0936
Carg06173	Watermelon (97103) v1	carwmB0962
Carg06173	Watermelon (97103) v1	carwmB0959
Carg06173	Watermelon (97103) v2	carwmbB1009
Carg06173	Watermelon (97103) v2	carwmbB1012
Carg06173	Watermelon (97103) v2	carwmbB1013
Carg06173	Wax gourd	carwgoB1114
Carg06173	Wax gourd	carwgoB1124