Carg06085 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg06085
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	DUF2358 domain-containing protein
Location	Cucurbita_argyrosperma_scaffold_026 : 976966 .. 977846 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTTTCTTCTTCCCCACCTCTTCCCTTCCCTCTCCCTTCTCTGCAAATCTAAACAAAATCCTCTTCTCTTCTCTCAAATCAGGGCTTCTTCTTCTTCTTCTTCTTCCTCTCTCCCCCTCACCAGCCTCCACTCCCCTCAGCCTCTTCTCCAGGGCCCTCAACTCGCCTCTCCTTCTGCTTTCCCCGATTCCCGCTCCGACGACCGAAGAGACGACTTCTATGTCAATCTCGGCCTCGCTGTCAGGACGCTTCGCGAGGACCTTCCTCTCATCTTCGCCAGAGACCTCAATTACGACATTTACAGGTGTACTTTTCTCTCTATTTCTGAGGCTAATTTATGATCCTCTGCTCTTTCGCCCGTCTTAACTTTGGGGGTTCGATCGTTTTCAGGGACGACATAACGTTTATTGATCCTCTCAACACGTTCAGTGGGATTGAGAGGTACAAATTGATATTCTGGGCGTTGAGATTTCATGGTAGAATTCTGTTCAGGGAGATCGGGATTGAGGTGTACAGGATTTGGCAGCCTTCTGAAAACGTTATCTTGATTCGGTGGAATTTGAAGGGCGTTCCTAGGGTTCCATGGGAGGCCAGAGGTGAGTTTCAGGGCACTTCGCGGTTTAAGGTGGATCGAAATGGGAAAATTTACGAACACAAAGTGGACAATTTAGCATTCAATTTCCCTCAGTCACTGAAACCGGCTGCGTCGGTGTTGGATTTGGTTACTGCGTGCCCTGCTAGCCCCAATCCCACGTTCTTGTGGGGAACGGAGGAATTGCATTGCTCTTCCTGGGTGGAGCTTTACCAGGCAGTAAGAAGAAGTGTGGGTGGAGAAGGCTATTTGATTACACAAGATGGATTTCTCACATGTTCATAG

mRNA sequence

ATGGCTTTTCTTCTTCCCCACCTCTTCCCTTCCCTCTCCCTTCTCTGCAAATCTAAACAAAATCCTCTTCTCTTCTCTCAAATCAGGGCTTCTTCTTCTTCTTCTTCTTCCTCTCTCCCCCTCACCAGCCTCCACTCCCCTCAGCCTCTTCTCCAGGGCCCTCAACTCGCCTCTCCTTCTGCTTTCCCCGATTCCCGCTCCGACGACCGAAGAGACGACTTCTATGTCAATCTCGGCCTCGCTGTCAGGACGCTTCGCGAGGACCTTCCTCTCATCTTCGCCAGAGACCTCAATTACGACATTTACAGGGACGACATAACGTTTATTGATCCTCTCAACACGTTCAGTGGGATTGAGAGGTACAAATTGATATTCTGGGCGTTGAGATTTCATGGTAGAATTCTGTTCAGGGAGATCGGGATTGAGGTGTACAGGATTTGGCAGCCTTCTGAAAACGTTATCTTGATTCGGTGGAATTTGAAGGGCGTTCCTAGGGTTCCATGGGAGGCCAGAGGTGAGTTTCAGGGCACTTCGCGGTTTAAGGTGGATCGAAATGGGAAAATTTACGAACACAAAGTGGACAATTTAGCATTCAATTTCCCTCAGTCACTGAAACCGGCTGCGTCGGTGTTGGATTTGGTTACTGCGTGCCCTGCTAGCCCCAATCCCACGTTCTTGTGGGGAACGGAGGAATTGCATTGCTCTTCCTGGGTGGAGCTTTACCAGGCAGTAAGAAGAAGTGTGGGTGGAGAAGGCTATTTGATTACACAAGATGGATTTCTCACATGTTCATAG

Coding sequence (CDS)

ATGGCTTTTCTTCTTCCCCACCTCTTCCCTTCCCTCTCCCTTCTCTGCAAATCTAAACAAAATCCTCTTCTCTTCTCTCAAATCAGGGCTTCTTCTTCTTCTTCTTCTTCCTCTCTCCCCCTCACCAGCCTCCACTCCCCTCAGCCTCTTCTCCAGGGCCCTCAACTCGCCTCTCCTTCTGCTTTCCCCGATTCCCGCTCCGACGACCGAAGAGACGACTTCTATGTCAATCTCGGCCTCGCTGTCAGGACGCTTCGCGAGGACCTTCCTCTCATCTTCGCCAGAGACCTCAATTACGACATTTACAGGGACGACATAACGTTTATTGATCCTCTCAACACGTTCAGTGGGATTGAGAGGTACAAATTGATATTCTGGGCGTTGAGATTTCATGGTAGAATTCTGTTCAGGGAGATCGGGATTGAGGTGTACAGGATTTGGCAGCCTTCTGAAAACGTTATCTTGATTCGGTGGAATTTGAAGGGCGTTCCTAGGGTTCCATGGGAGGCCAGAGGTGAGTTTCAGGGCACTTCGCGGTTTAAGGTGGATCGAAATGGGAAAATTTACGAACACAAAGTGGACAATTTAGCATTCAATTTCCCTCAGTCACTGAAACCGGCTGCGTCGGTGTTGGATTTGGTTACTGCGTGCCCTGCTAGCCCCAATCCCACGTTCTTGTGGGGAACGGAGGAATTGCATTGCTCTTCCTGGGTGGAGCTTTACCAGGCAGTAAGAAGAAGTGTGGGTGGAGAAGGCTATTTGATTACACAAGATGGATTTCTCACATGTTCATAG

Protein sequence

MAFLLPHLFPSLSLLCKSKQNPLLFSQIRASSSSSSSSLPLTSLHSPQPLLQGPQLASPSAFPDSRSDDRRDDFYVNLGLAVRTLREDLPLIFARDLNYDIYRDDITFIDPLNTFSGIERYKLIFWALRFHGRILFREIGIEVYRIWQPSENVILIRWNLKGVPRVPWEARGEFQGTSRFKVDRNGKIYEHKVDNLAFNFPQSLKPAASVLDLVTACPASPNPTFLWGTEELHCSSWVELYQAVRRSVGGEGYLITQDGFLTCS

Homology

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BLAST of Carg06085 vs. NCBI nr
Match: XP_022990138.1 (uncharacterized protein LOC111487121 [Cucurbita maxima])

HSP 1 Score: 524.2 bits (1349), Expect = 2.5e-145
Identity = 260/264 (98.48%), Postives = 261/264 (98.86%), Query Frame = 0


Query: 1   MAFLLPHLFPSLSLLCKSKQNPLLFSQIRASSSXXXXSLPLTSLHSPQPLLQGPQLASPS 60
           MAFLLPHLFPSLSLLCKSKQNPLLFSQIRASSS XXX L LTS+HSPQPLLQGPQLASPS
Sbjct: 1   MAFLLPHLFPSLSLLCKSKQNPLLFSQIRASSS-XXXXLSLTSVHSPQPLLQGPQLASPS 60

Query: 61  AFPDSRSDDRRDDFYVNLGLAVRTLREDLPLIFARDLNYDIYRDDITFIDPLNTFSGIER 120
           AFPDSRSDDRRDDFYVNLGLAVRTLREDLPLIFARDLNYDIYRDDITFIDPLNTFSGIER
Sbjct: 61  AFPDSRSDDRRDDFYVNLGLAVRTLREDLPLIFARDLNYDIYRDDITFIDPLNTFSGIER 120

Query: 121 YKLIFWALRFHGRILFREIGIEVYRIWQPSENVILIRWNLKGVPRVPWEARGEFQGTSRF 180
           YKLIFWALRFHGRILFREIGIEVYRIWQPSENVILIRWNLKGVPRVPWEARGEFQGTSRF
Sbjct: 121 YKLIFWALRFHGRILFREIGIEVYRIWQPSENVILIRWNLKGVPRVPWEARGEFQGTSRF 180

Query: 181 KVDRNGKIYEHKVDNLAFNFPQSLKPAASVLDLVTACPASPNPTFLWGTEELHCSSWVEL 240
           KVDRNGKIYEHKVDNLAFNFPQSLKPAASVLDLVTACPASPNPTFLWGTEELHCSSWVEL
Sbjct: 181 KVDRNGKIYEHKVDNLAFNFPQSLKPAASVLDLVTACPASPNPTFLWGTEELHCSSWVEL 240

Query: 241 YQAVRRSVGGEGYLITQDGFLTCS 265
           YQAVRRSVGGEGYLITQDGFLTCS
Sbjct: 241 YQAVRRSVGGEGYLITQDGFLTCS 263

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BLAST of Carg06085 vs. NCBI nr
Match: XP_023542319.1 (uncharacterized protein LOC111802248 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 523.1 bits (1346), Expect = 5.5e-145
Identity = 260/265 (98.11%), Postives = 260/265 (98.11%), Query Frame = 0


Query: 1   MAFLLPHLFPSLSLLCKSKQNPLLFSQIRA-SSSXXXXSLPLTSLHSPQPLLQGPQLASP 60
           MAFLLPHLFPSLSLLCKSKQNPLLFSQIRA SSS XXX   LTSLHSPQPLLQGPQLASP
Sbjct: 1   MAFLLPHLFPSLSLLCKSKQNPLLFSQIRASSSSPXXXXXXLTSLHSPQPLLQGPQLASP 60

Query: 61  SAFPDSRSDDRRDDFYVNLGLAVRTLREDLPLIFARDLNYDIYRDDITFIDPLNTFSGIE 120
           SAFPDSRSDDRRDDFYVNLGLAVRTLREDLPLIFARDLNYDIYRDDITFIDPLNTFSGIE
Sbjct: 61  SAFPDSRSDDRRDDFYVNLGLAVRTLREDLPLIFARDLNYDIYRDDITFIDPLNTFSGIE 120

Query: 121 RYKLIFWALRFHGRILFREIGIEVYRIWQPSENVILIRWNLKGVPRVPWEARGEFQGTSR 180
           RYKLIFWALRFHGRILFREIGIEVYRIWQPSENVILIRWNLKGVPRVPWEARGEFQGTSR
Sbjct: 121 RYKLIFWALRFHGRILFREIGIEVYRIWQPSENVILIRWNLKGVPRVPWEARGEFQGTSR 180

Query: 181 FKVDRNGKIYEHKVDNLAFNFPQSLKPAASVLDLVTACPASPNPTFLWGTEELHCSSWVE 240
           FKVDRNGKIYEHKVDNLAFNFPQSLKPAASVLDLVTACPASPNPTFLWGTEELHCSSWVE
Sbjct: 181 FKVDRNGKIYEHKVDNLAFNFPQSLKPAASVLDLVTACPASPNPTFLWGTEELHCSSWVE 240

Query: 241 LYQAVRRSVGGEGYLITQDGFLTCS 265
           LYQAVRRSVGGEGYLITQDGFLTCS
Sbjct: 241 LYQAVRRSVGGEGYLITQDGFLTCS 265

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BLAST of Carg06085 vs. NCBI nr
Match: XP_022961211.1 (uncharacterized protein LOC111461788 [Cucurbita moschata])

HSP 1 Score: 516.9 bits (1330), Expect = 4.0e-143
Identity = 259/265 (97.74%), Postives = 260/265 (98.11%), Query Frame = 0


Query: 1   MAFLLPHLFPSLSLLCKSKQNPLLFSQIRAS-SSXXXXSLPLTSLHSPQPLLQGPQLASP 60
           MAF LPHLFPSLSLLCKSKQNPLLFSQIRAS   XXXX LPLTSLHSP+PLLQGPQLASP
Sbjct: 1   MAF-LPHLFPSLSLLCKSKQNPLLFSQIRASXXXXXXXXLPLTSLHSPRPLLQGPQLASP 60

Query: 61  SAFPDSRSDDRRDDFYVNLGLAVRTLREDLPLIFARDLNYDIYRDDITFIDPLNTFSGIE 120
           SAFPDSRSDDRRDDFYVNLGLAVRTLREDLPLIFARDLNYDIYRDDITFIDPLNTFSGIE
Sbjct: 61  SAFPDSRSDDRRDDFYVNLGLAVRTLREDLPLIFARDLNYDIYRDDITFIDPLNTFSGIE 120

Query: 121 RYKLIFWALRFHGRILFREIGIEVYRIWQPSENVILIRWNLKGVPRVPWEARGEFQGTSR 180
           RYKLIFWALRFHGRILFREIGIEVYRIWQPSENVILIRWNLKGVPRVPWEARGEFQGTSR
Sbjct: 121 RYKLIFWALRFHGRILFREIGIEVYRIWQPSENVILIRWNLKGVPRVPWEARGEFQGTSR 180

Query: 181 FKVDRNGKIYEHKVDNLAFNFPQSLKPAASVLDLVTACPASPNPTFLWGTEELHCSSWVE 240
           FKVDRNGKIYEHKVDNLAFNFPQSLKPAASVLDLVTACPASPNPTFLWGTEELHCSSWVE
Sbjct: 181 FKVDRNGKIYEHKVDNLAFNFPQSLKPAASVLDLVTACPASPNPTFLWGTEELHCSSWVE 240

Query: 241 LYQAVRRSVGGEGYLITQDGFLTCS 265
           LYQAVRRSVGGEGYLITQDGFLTCS
Sbjct: 241 LYQAVRRSVGGEGYLITQDGFLTCS 264

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BLAST of Carg06085 vs. NCBI nr
Match: XP_004138817.2 (PREDICTED: uncharacterized protein LOC101218604 [Cucumis sativus])

HSP 1 Score: 457.2 bits (1175), Expect = 3.7e-125
Identity = 230/264 (87.12%), Postives = 238/264 (90.15%), Query Frame = 0


Query: 1   MAFLLPHLFPSLSLLCKSKQNPLLFSQIRASSSXXXXSLPLTSLHSPQPLLQGPQLASPS 60
           MA LLPHLFPSLSL  KSK N LLF   + S  XXXX    TS+HSPQ  LQG QLASP 
Sbjct: 1   MALLLPHLFPSLSLHSKSKDNSLLF---KPSXXXXXXXXXXTSVHSPQ--LQGSQLASPP 60

Query: 61  AFPDSRSDDRRDDFYVNLGLAVRTLREDLPLIFARDLNYDIYRDDITFIDPLNTFSGIER 120
             PDSRSD  RDDFYVNLGLAVRTLREDLPLIF RDLNYDIYRDDITF DPLNTF+GIER
Sbjct: 61  GSPDSRSDKPRDDFYVNLGLAVRTLREDLPLIFTRDLNYDIYRDDITFTDPLNTFTGIER 120

Query: 121 YKLIFWALRFHGRILFREIGIEVYRIWQPSENVILIRWNLKGVPRVPWEARGEFQGTSRF 180
           YKLIFWALRFHG+ILFREIGIEVYRIWQPSENVILIRWNLKGVPRVPWEARGEFQGTSR+
Sbjct: 121 YKLIFWALRFHGKILFREIGIEVYRIWQPSENVILIRWNLKGVPRVPWEARGEFQGTSRY 180

Query: 181 KVDRNGKIYEHKVDNLAFNFPQSLKPAASVLDLVTACPASPNPTFLWGTEELHCSSWVEL 240
           KVDRNGKIYEHKVDNLAFNFPQ LKPAASVLDLV+ACPASPNPTFLWGTE+LHCSSWVEL
Sbjct: 181 KVDRNGKIYEHKVDNLAFNFPQQLKPAASVLDLVSACPASPNPTFLWGTEDLHCSSWVEL 240

Query: 241 YQAVRRSVGGEGYLITQDGFLTCS 265
           YQ+VRRSVGGEGYLITQDGFLTCS
Sbjct: 241 YQSVRRSVGGEGYLITQDGFLTCS 259

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BLAST of Carg06085 vs. NCBI nr
Match: XP_022152488.1 (uncharacterized protein LOC111020206 [Momordica charantia])

HSP 1 Score: 454.5 bits (1168), Expect = 2.4e-124
Identity = 226/264 (85.61%), Postives = 231/264 (87.50%), Query Frame = 0


Query: 1   MAFLLPHLFPSLSLLCKSKQNPLLFSQIRASSSXXXXSLPLTSLHSPQPLLQGPQLASPS 60
           MA LLPHLFPSL L CKSK NPLLFS  R SSS     L LT+       +  PQLASPS
Sbjct: 3   MALLLPHLFPSLMLHCKSKPNPLLFSHFRPSSS----PLSLTA------AVHSPQLASPS 62

Query: 61  AFPDSRSDDRRDDFYVNLGLAVRTLREDLPLIFARDLNYDIYRDDITFIDPLNTFSGIER 120
           A  D+ SD RRDDFYVNLGLAVRTLREDLP IF  DLNYDIYRDDITFIDPLNTFSGIER
Sbjct: 63  ASSDTHSDHRRDDFYVNLGLAVRTLREDLPSIFITDLNYDIYRDDITFIDPLNTFSGIER 122

Query: 121 YKLIFWALRFHGRILFREIGIEVYRIWQPSENVILIRWNLKGVPRVPWEARGEFQGTSRF 180
           YKLIFWALRFH RILFREIGIEVYRIWQPSENVILIRWNLKGVPRVPWE RGEFQGTSR+
Sbjct: 123 YKLIFWALRFHARILFREIGIEVYRIWQPSENVILIRWNLKGVPRVPWEVRGEFQGTSRY 182

Query: 181 KVDRNGKIYEHKVDNLAFNFPQSLKPAASVLDLVTACPASPNPTFLWGTEELHCSSWVEL 240
           K+DRNGKIYEHKVDNLAFNFPQ LKPAASVLDLVTACPASPNPTFLWGTEELHCSSWVEL
Sbjct: 183 KLDRNGKIYEHKVDNLAFNFPQQLKPAASVLDLVTACPASPNPTFLWGTEELHCSSWVEL 242

Query: 241 YQAVRRSVGGEGYLITQDGFLTCS 265
           YQAVR SVGGEGYLITQDGFLTCS
Sbjct: 243 YQAVRTSVGGEGYLITQDGFLTCS 256

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BLAST of Carg06085 vs. TAIR10
Match: AT1G79510.1 (Uncharacterized conserved protein (DUF2358))

HSP 1 Score: 339.7 bits (870), Expect = 1.6e-93
Identity = 167/276 (60.51%), Postives = 209/276 (75.72%), Query Frame = 0


Query: 1   MAFLLPHLFPSLSL-LCKSKQNPLLFSQIRAS----------SSXXXXSLPLTSLHSPQP 60
           MAFLLP+L PS  L   KS +   + +Q  +S                 L L S+ +P P
Sbjct: 1   MAFLLPNLSPSFLLPTGKSLKEKPISNQALSSXXXXXXXXXXEEDSLSPLSLFSVQAPPP 60

Query: 61  LLQGPQLASPSAFPDSRSDDRRDDFYVNLGLAVRTLREDLPLIFARDLNYDIYRDDITFI 120
            ++G Q+ +  +  D      +DDFY+NLGLAVRTLREDLPL+F +DLNYDIYRDDIT +
Sbjct: 61  -VRGAQVKTKPSAQDKYQHGSKDDFYINLGLAVRTLREDLPLLFTKDLNYDIYRDDITLV 120

Query: 121 DPLNTFSGIERYKLIFWALRFHGRILFREIGIEVYRIWQPSENVILIRWNLKGVPRVPWE 180
           DP+NTFSGI+ YKLIFWALRFHG+ILFR+I +E++R+WQPSEN+ILIRWNLKGVPRVPWE
Sbjct: 121 DPMNTFSGIDNYKLIFWALRFHGKILFRDISLEIFRVWQPSENMILIRWNLKGVPRVPWE 180

Query: 181 ARGEFQGTSRFKVDRNGKIYEHKVDNLAFNFPQSLKPAASVLDLVTACPASPNPTFLWGT 240
           A+GEFQGTSR+K+DRNGKIYEHKVDNLAFNFP  LKPA SVLD+VTACPASPNPTF++G 
Sbjct: 181 AKGEFQGTSRYKLDRNGKIYEHKVDNLAFNFPHQLKPATSVLDMVTACPASPNPTFMFGA 240

Query: 241 EELHCSSWVELYQAVRRSVG-GEGYLITQDGFLTCS 265
            + + SSW+E Y+AV+R++   E  ++ QD F+ CS
Sbjct: 241 MDSYSSSWIEFYKAVQRTLDKQEEQMLVQDHFVPCS 275

[Close]

BLAST of Carg06085 vs. TAIR10
Match: AT1G16320.1 (Uncharacterized conserved protein (DUF2358))

HSP 1 Score: 332.0 bits (850), Expect = 3.3e-91
Identity = 169/275 (61.45%), Postives = 209/275 (76.00%), Query Frame = 0


Query: 1   MAFLLPHL-FPSLSLLCKSKQN-PLLFSQIRASSS--------XXXXSLPLTSLHSPQPL 60
           MAFLL +L  PS+ L      N   +FSQ  +SSS            +L L S+ SP   
Sbjct: 1   MAFLLSNLSSPSIHLQTGKYPNLKPIFSQSLSSSSSVSYEFVEENLSTLSLLSIQSPP-- 60

Query: 61  LQGPQLASPSAFPDSRSDDRRDDFYVNLGLAVRTLREDLPLIFARDLNYDIYRDDITFID 120
           L+  Q+ +  +  D  ++  RD+FY+NLG+AVRTLREDLPL+F RDLNYDIYRDDITF+D
Sbjct: 61  LKDTQVQTRHSSQDKHNNHDRDEFYINLGVAVRTLREDLPLLFTRDLNYDIYRDDITFVD 120

Query: 121 PLNTFSGIERYKLIFWALRFHGRILFREIGIEVYRIWQPSENVILIRWNLKGVPRVPWEA 180
           P+NTF+G++ YK+IFWALRFHG+ILFR+I +E++R+WQPSEN+ILIRWNLKGVPRVPWEA
Sbjct: 121 PMNTFTGMDNYKIIFWALRFHGKILFRDISLEIFRVWQPSENMILIRWNLKGVPRVPWEA 180

Query: 181 RGEFQGTSRFKVDRNGKIYEHKVDNLAFNFPQSLKPAASVLDLVTACPA-SPNPTFLWGT 240
           +GEFQGTSR+K+DRNGKIYEHKVDNLAFNFPQ LKPAASVLDLVTA PA SPNPTF +  
Sbjct: 181 KGEFQGTSRYKLDRNGKIYEHKVDNLAFNFPQQLKPAASVLDLVTASPASSPNPTFFFSP 240

Query: 241 EELHCSSWVELYQAVRRSVGGEGYLITQDGFLTCS 265
            + + SSWV+ YQAVR ++  E   +T D  +TCS
Sbjct: 241 VDSYSSSWVKFYQAVRGTLETEDMFVTTDCLVTCS 273

[Close]

BLAST of Carg06085 vs. TAIR10
Match: AT2G46220.1 (Uncharacterized conserved protein (DUF2358))

HSP 1 Score: 201.8 bits (512), Expect = 5.1e-52
Identity = 88/153 (57.52%), Postives = 117/153 (76.47%), Query Frame = 0


Query: 75  YVNLGLAVRTLREDLPLIFARDLNYDIYRDDITFIDPLNTFSGIERYKLIFWALRFHGRI 134
           YVN+G AVR++RE+ PL+F ++LN+DIYRDDI F DP+NTF GI+ YK IF ALRFHGRI
Sbjct: 85  YVNMGHAVRSIREEFPLLFYKELNFDIYRDDIVFKDPMNTFMGIDNYKSIFGALRFHGRI 144

Query: 135 LFREIGIEVYRIWQPSENVILIRWNLKGVPRVPWEARGEFQGTSRFKVDRNGKIYEHKVD 194
            FR + +++  +WQP+EN ++IRW + G+PR PWE RG F GTS +K D+NGKIYEHKVD
Sbjct: 145 FFRALCVDIVSVWQPTENTLMIRWTVHGIPRGPWETRGRFDGTSEYKFDKNGKIYEHKVD 204

Query: 195 NLAFNFPQSLKPAASVLDLVTA--CPASPNPTF 226
           N+A N P   +   +V +LV A  CP++P PT+
Sbjct: 205 NIAINSPPKFQ-MLTVQELVEAISCPSTPKPTY 236

[Close]

BLAST of Carg06085 vs. Swiss-Prot
Match: sp|Q32KT5|CF136_BOVIN (Uncharacterized protein C6orf136 homolog OS=Bos taurus OX=9913 PE=2 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 9.1e-06
Identity = 43/158 (27.22%), Postives = 68/158 (43.04%), Query Frame = 0


Query: 52  QGPQLASPSAFPDSRSDDRRDDFYVNLGLAVRTLREDLPLIFARDLNYDIYRDDITFIDP 111
           Q P  A PS  P + S D       +L +    LR++LP +F    +Y +Y  D+ FI+ 
Sbjct: 126 QAPGTAHPS--PATPSGD--PSMEEHLAVMYERLRQELPNLFLHSHDYTLYSSDVEFINE 185

Query: 112 LNTF--SGIERYKLIFWALRFHGRILFREIGIEVYRIWQPSEN-VILIRWNLKGVP---- 171
           +      G   Y L     RF     F ++ +E+ ++ +  EN  +  RW L G+P    
Sbjct: 186 ILNMRTKGRTWYILSLTLCRFLAWNYFAQLRLEILQLTRHPENWTLQARWRLVGLPIHLL 245

Query: 172 ------RVPWEARGEFQGTSRFKVDRNGKIYEHKVDNL 197
                 R   E    +   S F ++ NG I  H++D L
Sbjct: 246 FLRFYKRDKEELYRTYDAYSTFYLNSNGLICRHRLDKL 279

[Close]

BLAST of Carg06085 vs. Swiss-Prot
Match: sp|Q6MG12|CF136_RAT (Uncharacterized protein C6orf136 homolog OS=Rattus norvegicus OX=10116 PE=2 SV=1)

HSP 1 Score: 47.8 bits (112), Expect = 2.2e-04
Identity = 35/133 (26.32%), Postives = 58/133 (43.61%), Query Frame = 0


Query: 77  NLGLAVRTLREDLPLIFARDLNYDIYRDDITFIDPLNTF--SGIERYKLIFWALRFHGRI 136
           +L +    LR++LP +F R  +Y IY  D+ FI+ +      G   Y +     RF    
Sbjct: 4   HLAVMHERLRQELPTLFLRSHDYTIYSMDVEFINEILNVRTKGRTFYVMSLTLCRFLAWN 63

Query: 137 LFREIGIEVYRIWQPSEN-VILIRWNLKGVP----------RVPWEARGEFQGTSRFKVD 196
            F +  +E+ ++ +  EN  +  RW L G+P          R   +    F   S F ++
Sbjct: 64  YFAQFRLEILQLTRHPENWTLQARWRLIGLPVHMLFLRFYRRDKEDLYRTFDAFSTFYLN 123

[Close]

BLAST of Carg06085 vs. TrEMBL
Match: tr|A0A1S3B3N1|A0A1S3B3N1_CUCME (uncharacterized protein LOC103485412 OS=Cucumis melo OX=3656 GN=LOC103485412 PE=4 SV=1)

HSP 1 Score: 452.2 bits (1162), Expect = 7.9e-124
Identity = 229/270 (84.81%), Postives = 236/270 (87.41%), Query Frame = 0


Query: 1   MAFLLPHLFPSLSLLCKSKQNPLLFS------QIRASSSXXXXSLPLTSLHSPQPLLQGP 60
           MA LLPHLFPSLSL  KSK NPLLF              XXXX     S+HSPQ  LQG 
Sbjct: 1   MALLLPHLFPSLSLHSKSKDNPLLFKPXXXXXXXXXXXXXXXXXXXXXSVHSPQ--LQGS 60

Query: 61  QLASPSAFPDSRSDDRRDDFYVNLGLAVRTLREDLPLIFARDLNYDIYRDDITFIDPLNT 120
           QLASP   PDSRSD  RDDFYVNLGLAVRTLREDLPLIF RDLNYDIYRDDITF DPLNT
Sbjct: 61  QLASPPGSPDSRSDKPRDDFYVNLGLAVRTLREDLPLIFNRDLNYDIYRDDITFTDPLNT 120

Query: 121 FSGIERYKLIFWALRFHGRILFREIGIEVYRIWQPSENVILIRWNLKGVPRVPWEARGEF 180
           F+GIERYKLIFWALRFHG+ILFREIGIEVYRIWQPSENVILIRWNLKGVPRVPWEARGEF
Sbjct: 121 FTGIERYKLIFWALRFHGKILFREIGIEVYRIWQPSENVILIRWNLKGVPRVPWEARGEF 180

Query: 181 QGTSRFKVDRNGKIYEHKVDNLAFNFPQSLKPAASVLDLVTACPASPNPTFLWGTEELHC 240
           QGTSR+KVDRNGKIYEHKVDNLAFNFPQ LKPAASVLDLV+ACPASPNPTFLWGTE+LHC
Sbjct: 181 QGTSRYKVDRNGKIYEHKVDNLAFNFPQQLKPAASVLDLVSACPASPNPTFLWGTEDLHC 240

Query: 241 SSWVELYQAVRRSVGGEGYLITQDGFLTCS 265
           SSWVELYQ+VRRSVGGEGYLITQDGFLTCS
Sbjct: 241 SSWVELYQSVRRSVGGEGYLITQDGFLTCS 268

[Close]

BLAST of Carg06085 vs. TrEMBL
Match: tr|A0A0A0LSV6|A0A0A0LSV6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G402040 PE=4 SV=1)

HSP 1 Score: 424.1 bits (1089), Expect = 2.3e-115
Identity = 199/214 (92.99%), Postives = 205/214 (95.79%), Query Frame = 0


Query: 51  LQGPQLASPSAFPDSRSDDRRDDFYVNLGLAVRTLREDLPLIFARDLNYDIYRDDITFID 110
           LQG QLASP   PDSRSD  RDDFYVNLGLAVRTLREDLPLIF RDLNYDIYRDDITF D
Sbjct: 7   LQGSQLASPPGSPDSRSDKPRDDFYVNLGLAVRTLREDLPLIFTRDLNYDIYRDDITFTD 66

Query: 111 PLNTFSGIERYKLIFWALRFHGRILFREIGIEVYRIWQPSENVILIRWNLKGVPRVPWEA 170
           PLNTF+GIERYKLIFWALRFHG+ILFREIGIEVYRIWQPSENVILIRWNLKGVPRVPWEA
Sbjct: 67  PLNTFTGIERYKLIFWALRFHGKILFREIGIEVYRIWQPSENVILIRWNLKGVPRVPWEA 126

Query: 171 RGEFQGTSRFKVDRNGKIYEHKVDNLAFNFPQSLKPAASVLDLVTACPASPNPTFLWGTE 230
           RGEFQGTSR+KVDRNGKIYEHKVDNLAFNFPQ LKPAASVLDLV+ACPASPNPTFLWGTE
Sbjct: 127 RGEFQGTSRYKVDRNGKIYEHKVDNLAFNFPQQLKPAASVLDLVSACPASPNPTFLWGTE 186

Query: 231 ELHCSSWVELYQAVRRSVGGEGYLITQDGFLTCS 265
           +LHCSSWVELYQ+VRRSVGGEGYLITQDGFLTCS
Sbjct: 187 DLHCSSWVELYQSVRRSVGGEGYLITQDGFLTCS 220

[Close]

BLAST of Carg06085 vs. TrEMBL
Match: tr|A0A2P5ABM3|A0A2P5ABM3_PARAD (NTF2-like domain containing protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_348500 PE=4 SV=1)

HSP 1 Score: 382.5 bits (981), Expect = 7.7e-103
Identity = 194/271 (71.59%), Postives = 220/271 (81.18%), Query Frame = 0


Query: 1   MAFLLPHLFPSLSLLCKSKQNP----LLFSQIRASSSXXXXSLP--LTSLHSPQPLLQGP 60
           MAFLLP+L P L L  KSK+ P    L  SQ + ++S    SLP  LT+LH+P    +  
Sbjct: 1   MAFLLPNLSPPLLLQSKSKEKPTHQTLSQSQTKPNNSLSPLSLPSSLTTLHTPL-AEKSA 60

Query: 61  QLASPSAFPDSRSDDRRDDFYVNLGLAVRTLREDLPLIFARDLNYDIYRDDITFIDPLNT 120
           QL +P    D++    +DDFYVNLGLAVRTLREDLPLIF +DLNYDIYRDDITF DPLNT
Sbjct: 61  QLNTPG---DAQDKQPKDDFYVNLGLAVRTLREDLPLIFTKDLNYDIYRDDITFKDPLNT 120

Query: 121 FSGIERYKLIFWALRFHGRILFREIGIEVYRIWQPSENVILIRWNLKGVPRVPWEARGEF 180
           F+GIE YKLIFWALRFHGRILFREI +EVYRIWQPSENVILIRWNLKGVPRVPWEA+G+F
Sbjct: 121 FTGIENYKLIFWALRFHGRILFREISLEVYRIWQPSENVILIRWNLKGVPRVPWEAKGQF 180

Query: 181 QGTSRFKVDRNGKIYEHKVDNLAFNFPQSLKPAASVLDLVTACPASPNPTFLWGTEELHC 240
           QGTSR+K+DRNGKIYEHKVDNLAFNFPQ LKPAASVLDLV ACPASPNPTFLWG  + H 
Sbjct: 181 QGTSRYKLDRNGKIYEHKVDNLAFNFPQPLKPAASVLDLVAACPASPNPTFLWGPVDRHS 240

Query: 241 SSWVELYQAVRRSVGG-EGYLITQDGFLTCS 265
           SSWVE Y+AVR+++   EGYL+ QDG +TCS
Sbjct: 241 SSWVEFYRAVRKTLDDQEGYLLAQDGLVTCS 267

[Close]

BLAST of Carg06085 vs. TrEMBL
Match: tr|W9RB03|W9RB03_9ROSA (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_023922 PE=4 SV=1)

HSP 1 Score: 382.1 bits (980), Expect = 1.0e-102
Identity = 186/270 (68.89%), Postives = 212/270 (78.52%), Query Frame = 0


Query: 1   MAFLLPHLFPSLSLLCKSKQNPLLFSQIRASSSXXXXSLPLTSLHSPQPLLQGPQLASPS 60
           MAFLLP+L PSL L  KSK+ P++  Q    +     SL   SL S    LQ P +    
Sbjct: 1   MAFLLPNLAPSLLLQSKSKEKPIIHHQTLPPTKPNTPSLSSLSLSSSVTSLQTPSVEKSG 60

Query: 61  AFPDSRSD------DRRDDFYVNLGLAVRTLREDLPLIFARDLNYDIYRDDITFIDPLNT 120
           A  ++  D       +RDDFYVNLGLAVRTLREDLPLIF++DLNYDIYRDDITF+DPLNT
Sbjct: 61  AQDNTPKDAQDKQQPKRDDFYVNLGLAVRTLREDLPLIFSKDLNYDIYRDDITFVDPLNT 120

Query: 121 FSGIERYKLIFWALRFHGRILFREIGIEVYRIWQPSENVILIRWNLKGVPRVPWEARGEF 180
           FSGIE+YKLIFWALRFHG  LFREI +EVYRIWQPSENVILIRWNLKGVPRVPWEA+G+F
Sbjct: 121 FSGIEKYKLIFWALRFHGSFLFREISLEVYRIWQPSENVILIRWNLKGVPRVPWEAKGQF 180

Query: 181 QGTSRFKVDRNGKIYEHKVDNLAFNFPQSLKPAASVLDLVTACPASPNPTFLWGTEELHC 240
           QGTSR+K+DR GKIYEHK+DNLAFNFPQ LKPAASVLDLV ACPASPNPTFLW   ++H 
Sbjct: 181 QGTSRYKLDRQGKIYEHKIDNLAFNFPQPLKPAASVLDLVAACPASPNPTFLWDPVDMHS 240

Query: 241 SSWVELYQAVRRSVGGEGYLITQDGFLTCS 265
           SSWVE Y+AVR ++  EGY + QDG +TCS
Sbjct: 241 SSWVEFYRAVRHTLDQEGYSLAQDGLITCS 270

[Close]

BLAST of Carg06085 vs. TrEMBL
Match: tr|A0A2P5FLX0|A0A2P5FLX0_9ROSA (NTF2-like domain containing protein OS=Trema orientalis OX=63057 GN=TorRG33x02_054100 PE=4 SV=1)

HSP 1 Score: 381.3 bits (978), Expect = 1.7e-102
Identity = 193/271 (71.22%), Postives = 220/271 (81.18%), Query Frame = 0


Query: 1   MAFLLPHLFPSLSLLCKSKQNP----LLFSQIRASSSXXXXSLP--LTSLHSPQPLLQGP 60
           MAFLLP+L P L L  KSK+ P    L  SQ + ++S    SLP  LT+LH+P    +  
Sbjct: 1   MAFLLPNLSPPLLLQSKSKEKPTHQTLSQSQTKPNNSLSPLSLPSSLTTLHTPL-AEKSA 60

Query: 61  QLASPSAFPDSRSDDRRDDFYVNLGLAVRTLREDLPLIFARDLNYDIYRDDITFIDPLNT 120
           QL +P    D++    +DDFYVNLGLAVRTLREDLPLIF +DLNYDIYRDDITF DPLNT
Sbjct: 61  QLNTPG---DAQDKQPKDDFYVNLGLAVRTLREDLPLIFTKDLNYDIYRDDITFKDPLNT 120

Query: 121 FSGIERYKLIFWALRFHGRILFREIGIEVYRIWQPSENVILIRWNLKGVPRVPWEARGEF 180
           F+GIE YKLIFWALRFHGRILFREI +EVYRIWQPSENVILIRWNLKGVPRVPWEA+G+F
Sbjct: 121 FTGIENYKLIFWALRFHGRILFREISLEVYRIWQPSENVILIRWNLKGVPRVPWEAKGQF 180

Query: 181 QGTSRFKVDRNGKIYEHKVDNLAFNFPQSLKPAASVLDLVTACPASPNPTFLWGTEELHC 240
           QGTSR+K+DRNGKIYEHKVDNLAFNFPQ LKPAASVLDLV ACPASPNPTFLWG  + H 
Sbjct: 181 QGTSRYKLDRNGKIYEHKVDNLAFNFPQPLKPAASVLDLVAACPASPNPTFLWGPVDRHS 240

Query: 241 SSWVELYQAVRRSVGG-EGYLITQDGFLTCS 265
           SSW+E Y+AVR+++   EGYL+ QDG +TCS
Sbjct: 241 SSWLEFYRAVRKTLDDQEGYLLAQDGLVTCS 267

The following BLAST results are available for this feature:

BLAST of Carg06085 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022990138.1	2.5e-145	98.48	uncharacterized protein LOC111487121 [Cucurbita maxima]	[more]
XP_023542319.1	5.5e-145	98.11	uncharacterized protein LOC111802248 [Cucurbita pepo subsp. pepo]	[more]
XP_022961211.1	4.0e-143	97.74	uncharacterized protein LOC111461788 [Cucurbita moschata]	[more]
XP_004138817.2	3.7e-125	87.12	PREDICTED: uncharacterized protein LOC101218604 [Cucumis sativus]	[more]
XP_022152488.1	2.4e-124	85.61	uncharacterized protein LOC111020206 [Momordica charantia]	[more]

BLAST of Carg06085 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G79510.1	1.6e-93	60.51	Uncharacterized conserved protein (DUF2358)	[more]
AT1G16320.1	3.3e-91	61.45	Uncharacterized conserved protein (DUF2358)	[more]
AT2G46220.1	5.1e-52	57.52	Uncharacterized conserved protein (DUF2358)	[more]

BLAST of Carg06085 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q32KT5\|CF136_BOVIN	9.1e-06	27.22	Uncharacterized protein C6orf136 homolog OS=Bos taurus OX=9913 PE=2 SV=1	[more]
sp\|Q6MG12\|CF136_RAT	2.2e-04	26.32	Uncharacterized protein C6orf136 homolog OS=Rattus norvegicus OX=10116 PE=2 SV=1	[more]

BLAST of Carg06085 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3B3N1\|A0A1S3B3N1_CUCME	7.9e-124	84.81	uncharacterized protein LOC103485412 OS=Cucumis melo OX=3656 GN=LOC103485412 PE=...	[more]
tr\|A0A0A0LSV6\|A0A0A0LSV6_CUCSA	2.3e-115	92.99	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G402040 PE=4 SV=1	[more]
tr\|A0A2P5ABM3\|A0A2P5ABM3_PARAD	7.7e-103	71.59	NTF2-like domain containing protein OS=Parasponia andersonii OX=3476 GN=PanWU01x...	[more]
tr\|W9RB03\|W9RB03_9ROSA	1.0e-102	68.89	Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_023922 PE=4 SV=1	[more]
tr\|A0A2P5FLX0\|A0A2P5FLX0_9ROSA	1.7e-102	71.22	NTF2-like domain containing protein OS=Trema orientalis OX=63057 GN=TorRG33x02_0...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR032710	NTF2-like_dom_sf
IPR018790	DUF2358

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg06085-RA	Carg06085-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR018790	Protein of unknown function DUF2358	PFAM	PF10184	DUF2358	coord: 81..191 e-value: 2.6E-38 score: 130.7
None	No IPR available	PANTHER	PTHR31094	FAMILY NOT NAMED	coord: 49..226
IPR032710	NTF2-like domain superfamily	SUPERFAMILY	SSF54427	NTF2-like	coord: 96..192

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg06085	Cla011918	Watermelon (97103) v1	carwmB0021
Carg06085	Csa2G402040	Cucumber (Chinese Long) v2	carcuB0018
Carg06085	MELO3C008114	Melon (DHL92) v3.5.1	carmeB0023
Carg06085	ClCG11G008240	Watermelon (Charleston Gray)	carwcgB0020
Carg06085	CSPI02G24900	Wild cucumber (PI 183967)	carcpiB0018
Carg06085	Cucsa.088380	Cucumber (Gy14) v1	carcgyB0016
Carg06085	CmaCh15G000290	Cucurbita maxima (Rimu)	carcmaB0030
Carg06085	CmoCh15G000270	Cucurbita moschata (Rifu)	carcmoB0031
Carg06085	Cp4.1LG13g11570	Cucurbita pepo (Zucchini)	carcpeB0031
Carg06085	Cp4.1LG01g26080	Cucurbita pepo (Zucchini)	carcpeB0034
Carg06085	CsGy2G024620	Cucumber (Gy14) v2	carcgybB0017
Carg06085	MELO3C008114.2	Melon (DHL92) v3.6.1	carmedB0024
Carg06085	CsaV3_2G033420	Cucumber (Chinese Long) v3	carcucB0018
Carg06085	Cla97C11G215330	Watermelon (97103) v2	carwmbB0017
Carg06085	Bhi04G002061	Wax gourd	carwgoB0022

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg06085	Carg22868	Silver-seed gourd	carcarB028

The following block(s) are covering this gene:


Gene	Organism	Block
Carg06085	Cucurbita maxima (Rimu)	carcmaB0033
Carg06085	Cucurbita moschata (Rifu)	carcmoB0033
Carg06085	Bottle gourd (USVL1VR-Ls)	carlsiB017