CSPI02G24900 (gene) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI02G24900
Type	gene
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	TSA: Wollemia nobilis Ref_Wollemi_Transcript_4142_1713 transcribed RNA sequence
Location	Chr2 : 21330745 .. 21331842 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTCTTCTTCTTCCTCATCTCTTCCCTTCACTCTCCCTTCACTCCAAATCCAAAGACAATTCTCTTCTCTTTAAACCCTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTCCTTCTCTTTCGCTTACCAGTGTTCATTCTCCTCAGCTTCAAGGCTCTCAACTCGCTTCTCCCCCTGGTTCTCCCGATTCCCGTTCCGATAAGCCTAGAGATGACTTCTATGTCAATCTCGGCCTCGCTGTTAGAACTCTTCGTGAAGACCTTCCTCTAATTTTCACCAGAGACCTCAATTACGACATTTACAGGTACTTTTCTTTCTTTCTTTTAACGTACGTATTTCTGTTTTTCTTATTCATTTCTTTCTCTCGTCTCCTACTTATGTTGTTCTGGTGGGGATTTTCCAGGGACGATATAACTTTTACTGATCCTCTCAACACGTTTACTGGTATTGAGAGGTACAAATTGATCTTCTGGGCTCTGAGATTTCATGGCAAAATTCTTTTCCGTGAGATTGGAATTGAGGTTTACAGGATTTGGCAACCTTCTGAAAACGTTATATTGATTCGGTGGAACTTGAAGGGTGTTCCTAGGGTTCCATGGGAAGCTAGGGGTGAATTTCAAGGAACTTCTAGGTATAAAGTGGATCGAAATGGGAAAATTTATGAACACAAAGTTGATAATTTAGCATTTAATTTCCCTCAGCAATTGAAGCCAGCTGCATCAGTCTTGGATTTGGTTTCTGCTTGTCCTGCAAGCCCTAATCCAACTTTCTTGTGGGGAACAGAGGATTTGCATTGTTCTTCATGGGTTGAGCTTTATCAATCTGTGAGGAGAAGTGTAGGAGGAGAAGGGTATTTGATTACACAAGATGGATTTCTTACATGTTCATAG

mRNA sequence

ATGGCTCTTCTTCTTCCTCATCTCTTCCCTTCACTCTCCCTTCACTCCAAATCCAAAGACAATTCTCTTCTCTTTAAACCCTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTCCTTCTCTTTCGCTTACCAGTGTTCATTCTCCTCAGCTTCAAGGCTCTCAACTCGCTTCTCCCCCTGGTTCTCCCGATTCCCGTTCCGATAAGCCTAGAGATGACTTCTATGTCAATCTCGGCCTCGCTGTTAGAACTCTTCGTGAAGACCTTCCTCTAATTTTCACCAGAGACCTCAATTACGACATTTACAGGGACGATATAACTTTTACTGATCCTCTCAACACGTTTACTGGTATTGAGAGGTACAAATTGATCTTCTGGGCTCTGAGATTTCATGGCAAAATTCTTTTCCGTGAGATTGGAATTGAGGTTTACAGGATTTGGCAACCTTCTGAAAACGTTATATTGATTCGGTGGAACTTGAAGGGTGTTCCTAGGGTTCCATGGGAAGCTAGGGGTGAATTTCAAGGAACTTCTAGGTATAAAGTGGATCGAAATGGGAAAATTTATGAACACAAAGTTGATAATTTAGCATTTAATTTCCCTCAGCAATTGAAGCCAGCTGCATCAGTCTTGGATTTGGTTTCTGCTTGTCCTGCAAGCCCTAATCCAACTTTCTTGTGGGGAACAGAGGATTTGCATTGTTCTTCATGGGTTGAGCTTTATCAATCTGTGAGGAGAAGTGTAGGAGGAGAAGGGTATTTGATTACACAAGATGGATTTCTTACATGTTCATAG

Coding sequence (CDS)

ATGGCTCTTCTTCTTCCTCATCTCTTCCCTTCACTCTCCCTTCACTCCAAATCCAAAGACAATTCTCTTCTCTTTAAACCCTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTCCTTCTCTTTCGCTTACCAGTGTTCATTCTCCTCAGCTTCAAGGCTCTCAACTCGCTTCTCCCCCTGGTTCTCCCGATTCCCGTTCCGATAAGCCTAGAGATGACTTCTATGTCAATCTCGGCCTCGCTGTTAGAACTCTTCGTGAAGACCTTCCTCTAATTTTCACCAGAGACCTCAATTACGACATTTACAGGGACGATATAACTTTTACTGATCCTCTCAACACGTTTACTGGTATTGAGAGGTACAAATTGATCTTCTGGGCTCTGAGATTTCATGGCAAAATTCTTTTCCGTGAGATTGGAATTGAGGTTTACAGGATTTGGCAACCTTCTGAAAACGTTATATTGATTCGGTGGAACTTGAAGGGTGTTCCTAGGGTTCCATGGGAAGCTAGGGGTGAATTTCAAGGAACTTCTAGGTATAAAGTGGATCGAAATGGGAAAATTTATGAACACAAAGTTGATAATTTAGCATTTAATTTCCCTCAGCAATTGAAGCCAGCTGCATCAGTCTTGGATTTGGTTTCTGCTTGTCCTGCAAGCCCTAATCCAACTTTCTTGTGGGGAACAGAGGATTTGCATTGTTCTTCATGGGTTGAGCTTTATCAATCTGTGAGGAGAAGTGTAGGAGGAGAAGGGTATTTGATTACACAAGATGGATTTCTTACATGTTCATAG

Homology

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BLAST of CSPI02G24900 vs. TrEMBL
Match: A0A0A0LSV6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G402040 PE=4 SV=1)

HSP 1 Score: 454.9 bits (1169), Expect = 8.4e-125
Identity = 215/215 (100.00%), Postives = 215/215 (100.00%), Query Frame = 1


Query: 118 QLQGSQLASPPGSPDSRSDKPRDDFYVNLGLAVRTLREDLPLIFTRDLNYDIYRDDITFT 177
           QLQGSQLASPPGSPDSRSDKPRDDFYVNLGLAVRTLREDLPLIFTRDLNYDIYRDDITFT
Sbjct: 6   QLQGSQLASPPGSPDSRSDKPRDDFYVNLGLAVRTLREDLPLIFTRDLNYDIYRDDITFT 65

Query: 178 DPLNTFTGIERYKLIFWALRFHGKILFREIGIEVYRIWQPSENVILIRWNLKGVPRVPWE 237
           DPLNTFTGIERYKLIFWALRFHGKILFREIGIEVYRIWQPSENVILIRWNLKGVPRVPWE
Sbjct: 66  DPLNTFTGIERYKLIFWALRFHGKILFREIGIEVYRIWQPSENVILIRWNLKGVPRVPWE 125

Query: 238 ARGEFQGTSRYKVDRNGKIYEHKVDNLAFNFPQQLKPAASVLDLVSACPASPNPTFLWGT 297
           ARGEFQGTSRYKVDRNGKIYEHKVDNLAFNFPQQLKPAASVLDLVSACPASPNPTFLWGT
Sbjct: 126 ARGEFQGTSRYKVDRNGKIYEHKVDNLAFNFPQQLKPAASVLDLVSACPASPNPTFLWGT 185

Query: 298 EDLHCSSWVELYQSVRRSVGGEGYLITQDGFLTCS 333
           EDLHCSSWVELYQSVRRSVGGEGYLITQDGFLTCS
Sbjct: 186 EDLHCSSWVELYQSVRRSVGGEGYLITQDGFLTCS 220

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BLAST of CSPI02G24900 vs. TrEMBL
Match: A0A067F2J9_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g024498mg PE=4 SV=1)

HSP 1 Score: 366.3 bits (939), Expect = 3.9e-98
Identity = 171/225 (76.00%), Postives = 197/225 (87.56%), Query Frame = 1


Query: 108 SLSLTSVHSPQLQGSQLASPPGSPDSRSDKPRDDFYVNLGLAVRTLREDLPLIFTRDLNY 167
           S ++TS+  P LQ +Q+ +PPG+ D++  + +DDFYVNLGLAVRTLREDLPL+FTRDLNY
Sbjct: 44  SSAVTSLQIPALQDAQVKTPPGAQDNKQ-REKDDFYVNLGLAVRTLREDLPLLFTRDLNY 103

Query: 168 DIYRDDITFTDPLNTFTGIERYKLIFWALRFHGKILFREIGIEVYRIWQPSENVILIRWN 227
           DIYRDDITF DPLNTFTGIE YKLIFWALRFHG ILFREI ++V RIWQPSENVILIRWN
Sbjct: 104 DIYRDDITFVDPLNTFTGIENYKLIFWALRFHGGILFREISLDVLRIWQPSENVILIRWN 163

Query: 228 LKGVPRVPWEARGEFQGTSRYKVDRNGKIYEHKVDNLAFNFPQQLKPAASVLDLVSACPA 287
           L+ VPRVPWEA G+FQG+SRYK+DRNGKIYEHKVDNLAFNFP+ LKPAASVLDLV+ACPA
Sbjct: 164 LRAVPRVPWEAEGQFQGSSRYKLDRNGKIYEHKVDNLAFNFPRPLKPAASVLDLVTACPA 223

Query: 288 SPNPTFLWGTEDLHCSSWVELYQSVRRSVGGEGYLITQDGFLTCS 333
           SPNPTFLWG  D + SSWVELY++VR ++  EGYL  QDG +TCS
Sbjct: 224 SPNPTFLWGPVDAYSSSWVELYRAVRETLNQEGYLHVQDGLVTCS 267

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BLAST of CSPI02G24900 vs. TrEMBL
Match: W9RB03_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_023922 PE=4 SV=1)

HSP 1 Score: 356.3 bits (913), Expect = 4.1e-95
Identity = 174/237 (73.42%), Postives = 202/237 (85.23%), Query Frame = 1


Query: 98  SSSSSSSSSPSLSLTSVHSPQLQ--GSQLASPPGSPDSRSDKPRDDFYVNLGLAVRTLRE 157
           ++ S SS S S S+TS+ +P ++  G+Q  +P  + D +  K RDDFYVNLGLAVRTLRE
Sbjct: 35  NTPSLSSLSLSSSVTSLQTPSVEKSGAQDNTPKDAQDKQQPK-RDDFYVNLGLAVRTLRE 94

Query: 158 DLPLIFTRDLNYDIYRDDITFTDPLNTFTGIERYKLIFWALRFHGKILFREIGIEVYRIW 217
           DLPLIF++DLNYDIYRDDITF DPLNTF+GIE+YKLIFWALRFHG  LFREI +EVYRIW
Sbjct: 95  DLPLIFSKDLNYDIYRDDITFVDPLNTFSGIEKYKLIFWALRFHGSFLFREISLEVYRIW 154

Query: 218 QPSENVILIRWNLKGVPRVPWEARGEFQGTSRYKVDRNGKIYEHKVDNLAFNFPQQLKPA 277
           QPSENVILIRWNLKGVPRVPWEA+G+FQGTSRYK+DR GKIYEHK+DNLAFNFPQ LKPA
Sbjct: 155 QPSENVILIRWNLKGVPRVPWEAKGQFQGTSRYKLDRQGKIYEHKIDNLAFNFPQPLKPA 214

Query: 278 ASVLDLVSACPASPNPTFLWGTEDLHCSSWVELYQSVRRSVGGEGYLITQDGFLTCS 333
           ASVLDLV+ACPASPNPTFLW   D+H SSWVE Y++VR ++  EGY + QDG +TCS
Sbjct: 215 ASVLDLVAACPASPNPTFLWDPVDMHSSSWVEFYRAVRHTLDQEGYSLAQDGLITCS 270

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BLAST of CSPI02G24900 vs. TrEMBL
Match: A0A061FB50_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_033526 PE=4 SV=1)

HSP 1 Score: 350.5 bits (898), Expect = 2.2e-93
Identity = 173/231 (74.89%), Postives = 196/231 (84.85%), Query Frame = 1


Query: 104 SSSPSLS--LTSVHSPQLQGSQLASPPGSPDSRSDK-----PRDDFYVNLGLAVRTLRED 163
           S +P LS    +V SP LQGSQ+     SP    DK      RD+FYVNLGLAVRTLRED
Sbjct: 33  SRTPKLSSETLTVQSPTLQGSQVKVH--SPSLHQDKHQQPHQRDEFYVNLGLAVRTLRED 92

Query: 164 LPLIFTRDLNYDIYRDDITFTDPLNTFTGIERYKLIFWALRFHGKILFREIGIEVYRIWQ 223
           LPL+FTRDL+YDIYRDD+TF DPLNTF+GIE YKLIFWALRFHGKILFREI +EV+RIWQ
Sbjct: 93  LPLLFTRDLDYDIYRDDVTFVDPLNTFSGIENYKLIFWALRFHGKILFREISLEVFRIWQ 152

Query: 224 PSENVILIRWNLKGVPRVPWEARGEFQGTSRYKVDRNGKIYEHKVDNLAFNFPQQLKPAA 283
           PSENVILIRWNL+GVPRVPWEA+G+FQGTSRYK+DRNGKIYEHKVDNLAFNFPQ LKPAA
Sbjct: 153 PSENVILIRWNLRGVPRVPWEAKGQFQGTSRYKLDRNGKIYEHKVDNLAFNFPQPLKPAA 212

Query: 284 SVLDLVSACPASPNPTFLWGTEDLHCSSWVELYQSVRRSVGGEGYLITQDG 328
           SVLDLV+A PASPNPTFLWG  D++ SSWVE Y++VR+++  EGYL+ QDG
Sbjct: 213 SVLDLVAAGPASPNPTFLWGPVDMYQSSWVEFYRAVRQTLDREGYLLAQDG 261

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BLAST of CSPI02G24900 vs. TrEMBL
Match: A0A068UYD9_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00038549001 PE=4 SV=1)

HSP 1 Score: 343.6 bits (880), Expect = 2.7e-91
Identity = 159/209 (76.08%), Postives = 180/209 (86.12%), Query Frame = 1


Query: 124 LASPPGSPDSRSDKPRDDFYVNLGLAVRTLREDLPLIFTRDLNYDIYRDDITFTDPLNTF 183
           LASP  +     D  RDDF+VNLGLAVRTLREDLPL+FT+DLNY IYRDDITF DPLNTF
Sbjct: 72  LASPQDNKQHEHDH-RDDFFVNLGLAVRTLREDLPLLFTKDLNYGIYRDDITFVDPLNTF 131

Query: 184 TGIERYKLIFWALRFHGKILFREIGIEVYRIWQPSENVILIRWNLKGVPRVPWEARGEFQ 243
            GIE+YKLIFWALRFHG+ILFREI ++V RIWQPSEN+ILIRWNL+GVPRVPWEARGEFQ
Sbjct: 132 AGIEKYKLIFWALRFHGRILFREISLQVLRIWQPSENLILIRWNLRGVPRVPWEARGEFQ 191

Query: 244 GTSRYKVDRNGKIYEHKVDNLAFNFPQQLKPAASVLDLVSACPASPNPTFLWGTEDLHCS 303
            TSRYK+DRNGKIYEHKVDNLAFNFPQ LKPAASVLDLV++CP SPNPTFLWG  D+H S
Sbjct: 192 ATSRYKLDRNGKIYEHKVDNLAFNFPQPLKPAASVLDLVASCPTSPNPTFLWGPADVHSS 251

Query: 304 SWVELYQSVRRSVGGEGYLITQDGFLTCS 333
           SWVE Y++V+ ++  E  LI+QD  + CS
Sbjct: 252 SWVEFYRAVKETLDRETSLISQDCLIPCS 279

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BLAST of CSPI02G24900 vs. TAIR10
Match: AT1G79510.1 (AT1G79510.1 Uncharacterized conserved protein (DUF2358))

HSP 1 Score: 325.1 bits (832), Expect = 5.1e-89
Identity = 169/251 (67.33%), Postives = 208/251 (82.87%), Query Frame = 1


Query: 84  SSSSSSSSSSSSSSSSSSSSSSSPSLSLTSVHSPQ-LQGSQLASPPGSPDSRSDKPRDDF 143
           S+ + SSSSSSS+S      S SP LSL SV +P  ++G+Q+ + P + D      +DDF
Sbjct: 26  SNQALSSSSSSSNSYEFEEDSLSP-LSLFSVQAPPPVRGAQVKTKPSAQDKYQHGSKDDF 85

Query: 144 YVNLGLAVRTLREDLPLIFTRDLNYDIYRDDITFTDPLNTFTGIERYKLIFWALRFHGKI 203
           Y+NLGLAVRTLREDLPL+FT+DLNYDIYRDDIT  DP+NTF+GI+ YKLIFWALRFHGKI
Sbjct: 86  YINLGLAVRTLREDLPLLFTKDLNYDIYRDDITLVDPMNTFSGIDNYKLIFWALRFHGKI 145

Query: 204 LFREIGIEVYRIWQPSENVILIRWNLKGVPRVPWEARGEFQGTSRYKVDRNGKIYEHKVD 263
           LFR+I +E++R+WQPSEN+ILIRWNLKGVPRVPWEA+GEFQGTSRYK+DRNGKIYEHKVD
Sbjct: 146 LFRDISLEIFRVWQPSENMILIRWNLKGVPRVPWEAKGEFQGTSRYKLDRNGKIYEHKVD 205

Query: 264 NLAFNFPQQLKPAASVLDLVSACPASPNPTFLWGTEDLHCSSWVELYQSVRRSVG-GEGY 323
           NLAFNFP QLKPA SVLD+V+ACPASPNPTF++G  D + SSW+E Y++V+R++   E  
Sbjct: 206 NLAFNFPHQLKPATSVLDMVTACPASPNPTFMFGAMDSYSSSWIEFYKAVQRTLDKQEEQ 265

Query: 324 LITQDGFLTCS 333
           ++ QD F+ CS
Sbjct: 266 MLVQDHFVPCS 275

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BLAST of CSPI02G24900 vs. TAIR10
Match: AT1G16320.1 (AT1G16320.1 Uncharacterized conserved protein (DUF2358))

HSP 1 Score: 290.0 bits (741), Expect = 1.8e-78
Identity = 171/268 (63.81%), Postives = 208/268 (77.61%), Query Frame = 1


Query: 66  SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSPSLSLTSVHSPQLQGSQLA 125
           S+ SS S    +    +     S S SSSSS S      +  +LSL S+ SP L+ +Q+ 
Sbjct: 6   SNLSSPSIHLQTGKYPNLKPIFSQSLSSSSSVSYEFVEENLSTLSLLSIQSPPLKDTQVQ 65

Query: 126 SPPGSPDSRSDKPRDDFYVNLGLAVRTLREDLPLIFTRDLNYDIYRDDITFTDPLNTFTG 185
           +   S D  ++  RD+FY+NLG+AVRTLREDLPL+FTRDLNYDIYRDDITF DP+NTFTG
Sbjct: 66  TRHSSQDKHNNHDRDEFYINLGVAVRTLREDLPLLFTRDLNYDIYRDDITFVDPMNTFTG 125

Query: 186 IERYKLIFWALRFHGKILFREIGIEVYRIWQPSENVILIRWNLKGVPRVPWEARGEFQGT 245
           ++ YK+IFWALRFHGKILFR+I +E++R+WQPSEN+ILIRWNLKGVPRVPWEA+GEFQGT
Sbjct: 126 MDNYKIIFWALRFHGKILFRDISLEIFRVWQPSENMILIRWNLKGVPRVPWEAKGEFQGT 185

Query: 246 SRYKVDRNGKIYEHKVDNLAFNFPQQLKPAASVLDLVSACPA-SPNPTFLWGTEDLHCSS 305
           SRYK+DRNGKIYEHKVDNLAFNFPQQLKPAASVLDLV+A PA SPNPTF +   D + SS
Sbjct: 186 SRYKLDRNGKIYEHKVDNLAFNFPQQLKPAASVLDLVTASPASSPNPTFFFSPVDSYSSS 245

Query: 306 WVELYQSVRRSVGGEGYLITQDGFLTCS 333
           WV+ YQ+VR ++  E   +T D  +TCS
Sbjct: 246 WVKFYQAVRGTLETEDMFVTTDCLVTCS 273

[Close]

BLAST of CSPI02G24900 vs. TAIR10
Match: AT2G46220.1 (AT2G46220.1 Uncharacterized conserved protein (DUF2358))

HSP 1 Score: 206.1 bits (523), Expect = 3.4e-53
Identity = 88/164 (53.66%), Postives = 123/164 (75.00%), Query Frame = 1


Query: 132 DSRSDKPRDDFYVNLGLAVRTLREDLPLIFTRDLNYDIYRDDITFTDPLNTFTGIERYKL 191
           +   ++ +  +YVN+G AVR++RE+ PL+F ++LN+DIYRDDI F DP+NTF GI+ YK 
Sbjct: 74  EEEEEEDKQSYYVNMGHAVRSIREEFPLLFYKELNFDIYRDDIVFKDPMNTFMGIDNYKS 133

Query: 192 IFWALRFHGKILFREIGIEVYRIWQPSENVILIRWNLKGVPRVPWEARGEFQGTSRYKVD 251
           IF ALRFHG+I FR + +++  +WQP+EN ++IRW + G+PR PWE RG F GTS YK D
Sbjct: 134 IFGALRFHGRIFFRALCVDIVSVWQPTENTLMIRWTVHGIPRGPWETRGRFDGTSEYKFD 193

Query: 252 RNGKIYEHKVDNLAFNFPQQLKPAASVLDLVSA--CPASPNPTF 294
           +NGKIYEHKVDN+A N P + +   +V +LV A  CP++P PT+
Sbjct: 194 KNGKIYEHKVDNIAINSPPKFQ-MLTVQELVEAISCPSTPKPTY 236

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BLAST of CSPI02G24900 vs. NCBI nr
Match: gi|700207977|gb|KGN63096.1| (hypothetical protein Csa_2G402040 [Cucumis sativus])

HSP 1 Score: 454.9 bits (1169), Expect = 1.2e-124
Identity = 215/215 (100.00%), Postives = 215/215 (100.00%), Query Frame = 1


Query: 118 QLQGSQLASPPGSPDSRSDKPRDDFYVNLGLAVRTLREDLPLIFTRDLNYDIYRDDITFT 177
           QLQGSQLASPPGSPDSRSDKPRDDFYVNLGLAVRTLREDLPLIFTRDLNYDIYRDDITFT
Sbjct: 6   QLQGSQLASPPGSPDSRSDKPRDDFYVNLGLAVRTLREDLPLIFTRDLNYDIYRDDITFT 65

Query: 178 DPLNTFTGIERYKLIFWALRFHGKILFREIGIEVYRIWQPSENVILIRWNLKGVPRVPWE 237
           DPLNTFTGIERYKLIFWALRFHGKILFREIGIEVYRIWQPSENVILIRWNLKGVPRVPWE
Sbjct: 66  DPLNTFTGIERYKLIFWALRFHGKILFREIGIEVYRIWQPSENVILIRWNLKGVPRVPWE 125

Query: 238 ARGEFQGTSRYKVDRNGKIYEHKVDNLAFNFPQQLKPAASVLDLVSACPASPNPTFLWGT 297
           ARGEFQGTSRYKVDRNGKIYEHKVDNLAFNFPQQLKPAASVLDLVSACPASPNPTFLWGT
Sbjct: 126 ARGEFQGTSRYKVDRNGKIYEHKVDNLAFNFPQQLKPAASVLDLVSACPASPNPTFLWGT 185

Query: 298 EDLHCSSWVELYQSVRRSVGGEGYLITQDGFLTCS 333
           EDLHCSSWVELYQSVRRSVGGEGYLITQDGFLTCS
Sbjct: 186 EDLHCSSWVELYQSVRRSVGGEGYLITQDGFLTCS 220

[Close]

BLAST of CSPI02G24900 vs. NCBI nr
Match: gi|778672943|ref|XP_004138817.2| (PREDICTED: uncharacterized protein LOC101218604 [Cucumis sativus])

HSP 1 Score: 451.8 bits (1161), Expect = 1.0e-123
Identity = 236/249 (94.78%), Postives = 237/249 (95.18%), Query Frame = 1


Query: 84  SSSSSSSSSSSSSSSSSSSSSSSPSLSLTSVHSPQLQGSQLASPPGSPDSRSDKPRDDFY 143
           S S  S S  +S     SSSSSS SLSLTSVHSPQLQGSQLASPPGSPDSRSDKPRDDFY
Sbjct: 11  SLSLHSKSKDNSLLFKPSSSSSSSSLSLTSVHSPQLQGSQLASPPGSPDSRSDKPRDDFY 70

Query: 144 VNLGLAVRTLREDLPLIFTRDLNYDIYRDDITFTDPLNTFTGIERYKLIFWALRFHGKIL 203
           VNLGLAVRTLREDLPLIFTRDLNYDIYRDDITFTDPLNTFTGIERYKLIFWALRFHGKIL
Sbjct: 71  VNLGLAVRTLREDLPLIFTRDLNYDIYRDDITFTDPLNTFTGIERYKLIFWALRFHGKIL 130

Query: 204 FREIGIEVYRIWQPSENVILIRWNLKGVPRVPWEARGEFQGTSRYKVDRNGKIYEHKVDN 263
           FREIGIEVYRIWQPSENVILIRWNLKGVPRVPWEARGEFQGTSRYKVDRNGKIYEHKVDN
Sbjct: 131 FREIGIEVYRIWQPSENVILIRWNLKGVPRVPWEARGEFQGTSRYKVDRNGKIYEHKVDN 190

Query: 264 LAFNFPQQLKPAASVLDLVSACPASPNPTFLWGTEDLHCSSWVELYQSVRRSVGGEGYLI 323
           LAFNFPQQLKPAASVLDLVSACPASPNPTFLWGTEDLHCSSWVELYQSVRRSVGGEGYLI
Sbjct: 191 LAFNFPQQLKPAASVLDLVSACPASPNPTFLWGTEDLHCSSWVELYQSVRRSVGGEGYLI 250

Query: 324 TQDGFLTCS 333
           TQDGFLTCS
Sbjct: 251 TQDGFLTCS 259

[Close]

BLAST of CSPI02G24900 vs. NCBI nr
Match: gi|659081207|ref|XP_008441209.1| (PREDICTED: uncharacterized protein LOC103485412 [Cucumis melo])

HSP 1 Score: 446.4 bits (1147), Expect = 4.3e-122
Identity = 242/258 (93.80%), Postives = 243/258 (94.19%), Query Frame = 1


Query: 75  SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSPSLSLTSVHSPQLQGSQLASPPGSPDSR 134
           S S  S S  +      SSSSSSSSSSS S SPSLSLTSVHSPQLQGSQLASPPGSPDSR
Sbjct: 11  SLSLHSKSKDNPLLFKPSSSSSSSSSSSPSPSPSLSLTSVHSPQLQGSQLASPPGSPDSR 70

Query: 135 SDKPRDDFYVNLGLAVRTLREDLPLIFTRDLNYDIYRDDITFTDPLNTFTGIERYKLIFW 194
           SDKPRDDFYVNLGLAVRTLREDLPLIF RDLNYDIYRDDITFTDPLNTFTGIERYKLIFW
Sbjct: 71  SDKPRDDFYVNLGLAVRTLREDLPLIFNRDLNYDIYRDDITFTDPLNTFTGIERYKLIFW 130

Query: 195 ALRFHGKILFREIGIEVYRIWQPSENVILIRWNLKGVPRVPWEARGEFQGTSRYKVDRNG 254
           ALRFHGKILFREIGIEVYRIWQPSENVILIRWNLKGVPRVPWEARGEFQGTSRYKVDRNG
Sbjct: 131 ALRFHGKILFREIGIEVYRIWQPSENVILIRWNLKGVPRVPWEARGEFQGTSRYKVDRNG 190

Query: 255 KIYEHKVDNLAFNFPQQLKPAASVLDLVSACPASPNPTFLWGTEDLHCSSWVELYQSVRR 314
           KIYEHKVDNLAFNFPQQLKPAASVLDLVSACPASPNPTFLWGTEDLHCSSWVELYQSVRR
Sbjct: 191 KIYEHKVDNLAFNFPQQLKPAASVLDLVSACPASPNPTFLWGTEDLHCSSWVELYQSVRR 250

Query: 315 SVGGEGYLITQDGFLTCS 333
           SVGGEGYLITQDGFLTCS
Sbjct: 251 SVGGEGYLITQDGFLTCS 268

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BLAST of CSPI02G24900 vs. NCBI nr
Match: gi|641842674|gb|KDO61578.1| (hypothetical protein CISIN_1g024498mg [Citrus sinensis])

HSP 1 Score: 366.3 bits (939), Expect = 5.6e-98
Identity = 171/225 (76.00%), Postives = 197/225 (87.56%), Query Frame = 1


Query: 108 SLSLTSVHSPQLQGSQLASPPGSPDSRSDKPRDDFYVNLGLAVRTLREDLPLIFTRDLNY 167
           S ++TS+  P LQ +Q+ +PPG+ D++  + +DDFYVNLGLAVRTLREDLPL+FTRDLNY
Sbjct: 44  SSAVTSLQIPALQDAQVKTPPGAQDNKQ-REKDDFYVNLGLAVRTLREDLPLLFTRDLNY 103

Query: 168 DIYRDDITFTDPLNTFTGIERYKLIFWALRFHGKILFREIGIEVYRIWQPSENVILIRWN 227
           DIYRDDITF DPLNTFTGIE YKLIFWALRFHG ILFREI ++V RIWQPSENVILIRWN
Sbjct: 104 DIYRDDITFVDPLNTFTGIENYKLIFWALRFHGGILFREISLDVLRIWQPSENVILIRWN 163

Query: 228 LKGVPRVPWEARGEFQGTSRYKVDRNGKIYEHKVDNLAFNFPQQLKPAASVLDLVSACPA 287
           L+ VPRVPWEA G+FQG+SRYK+DRNGKIYEHKVDNLAFNFP+ LKPAASVLDLV+ACPA
Sbjct: 164 LRAVPRVPWEAEGQFQGSSRYKLDRNGKIYEHKVDNLAFNFPRPLKPAASVLDLVTACPA 223

Query: 288 SPNPTFLWGTEDLHCSSWVELYQSVRRSVGGEGYLITQDGFLTCS 333
           SPNPTFLWG  D + SSWVELY++VR ++  EGYL  QDG +TCS
Sbjct: 224 SPNPTFLWGPVDAYSSSWVELYRAVRETLNQEGYLHVQDGLVTCS 267

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BLAST of CSPI02G24900 vs. NCBI nr
Match: gi|703096771|ref|XP_010095934.1| (hypothetical protein L484_023922 [Morus notabilis])

HSP 1 Score: 356.3 bits (913), Expect = 5.8e-95
Identity = 174/237 (73.42%), Postives = 202/237 (85.23%), Query Frame = 1


Query: 98  SSSSSSSSSPSLSLTSVHSPQLQ--GSQLASPPGSPDSRSDKPRDDFYVNLGLAVRTLRE 157
           ++ S SS S S S+TS+ +P ++  G+Q  +P  + D +  K RDDFYVNLGLAVRTLRE
Sbjct: 35  NTPSLSSLSLSSSVTSLQTPSVEKSGAQDNTPKDAQDKQQPK-RDDFYVNLGLAVRTLRE 94

Query: 158 DLPLIFTRDLNYDIYRDDITFTDPLNTFTGIERYKLIFWALRFHGKILFREIGIEVYRIW 217
           DLPLIF++DLNYDIYRDDITF DPLNTF+GIE+YKLIFWALRFHG  LFREI +EVYRIW
Sbjct: 95  DLPLIFSKDLNYDIYRDDITFVDPLNTFSGIEKYKLIFWALRFHGSFLFREISLEVYRIW 154

Query: 218 QPSENVILIRWNLKGVPRVPWEARGEFQGTSRYKVDRNGKIYEHKVDNLAFNFPQQLKPA 277
           QPSENVILIRWNLKGVPRVPWEA+G+FQGTSRYK+DR GKIYEHK+DNLAFNFPQ LKPA
Sbjct: 155 QPSENVILIRWNLKGVPRVPWEAKGQFQGTSRYKLDRQGKIYEHKIDNLAFNFPQPLKPA 214

Query: 278 ASVLDLVSACPASPNPTFLWGTEDLHCSSWVELYQSVRRSVGGEGYLITQDGFLTCS 333
           ASVLDLV+ACPASPNPTFLW   D+H SSWVE Y++VR ++  EGY + QDG +TCS
Sbjct: 215 ASVLDLVAACPASPNPTFLWDPVDMHSSSWVEFYRAVRHTLDQEGYSLAQDGLITCS 270

The following BLAST results are available for this feature:

BLAST of CSPI02G24900 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CSPI02G24900 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LSV6_CUCSA	8.4e-125	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G402040 PE=4 SV=1	[more]
A0A067F2J9_CITSI	3.9e-98	76.00	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g024498mg PE=4 SV=1	[more]
W9RB03_9ROSA	4.1e-95	73.42	Uncharacterized protein OS=Morus notabilis GN=L484_023922 PE=4 SV=1	[more]
A0A061FB50_THECC	2.2e-93	74.89	Uncharacterized protein OS=Theobroma cacao GN=TCM_033526 PE=4 SV=1	[more]
A0A068UYD9_COFCA	2.7e-91	76.08	Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00038549001 PE=4 SV=1	[more]

BLAST of CSPI02G24900 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G79510.1	5.1e-89	67.33	Uncharacterized conserved protein (DUF2358)	[more]
AT1G16320.1	1.8e-78	63.81	Uncharacterized conserved protein (DUF2358)	[more]
AT2G46220.1	3.4e-53	53.66	Uncharacterized conserved protein (DUF2358)	[more]

BLAST of CSPI02G24900 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700207977\|gb\|KGN63096.1\|	1.2e-124	100.00	hypothetical protein Csa_2G402040 [Cucumis sativus]	[more]
gi\|778672943\|ref\|XP_004138817.2\|	1.0e-123	94.78	PREDICTED: uncharacterized protein LOC101218604 [Cucumis sativus]	[more]
gi\|659081207\|ref\|XP_008441209.1\|	4.3e-122	93.80	PREDICTED: uncharacterized protein LOC103485412 [Cucumis melo]	[more]
gi\|641842674\|gb\|KDO61578.1\|	5.6e-98	76.00	hypothetical protein CISIN_1g024498mg [Citrus sinensis]	[more]
gi\|703096771\|ref\|XP_010095934.1\|	5.8e-95	73.42	hypothetical protein L484_023922 [Morus notabilis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR018790	DUF2358

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0090304	nucleic acid metabolic process
biological_process	GO:0071897	DNA biosynthetic process
biological_process	GO:0006260	DNA replication
biological_process	GO:0090305	nucleic acid phosphodiester bond hydrolysis
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0042575	DNA polymerase complex
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0016779	nucleotidyltransferase activity
molecular_function	GO:0003887	DNA-directed DNA polymerase activity
molecular_function	GO:0004527	exonuclease activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI02G24900.1	CSPI02G24900.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR018790	Protein of unknown function DUF2358	PFAM	PF10184	DUF2358	coord: 149..259 score: 2.9
None	No IPR available	PANTHER	PTHR22750	G-PROTEIN COUPLED RECEPTOR	coord: 139..268 score: 2.4
None	No IPR available	PANTHER	PTHR22750:SF44	SUBFAMILY NOT NAMED	coord: 139..268 score: 2.4

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CSPI02G24900	Cla011918	Watermelon (97103) v1	cpiwmB167
CSPI02G24900	Csa2G402040	Cucumber (Chinese Long) v2	cpicuB065
CSPI02G24900	MELO3C008114	Melon (DHL92) v3.5.1	cpimeB116
CSPI02G24900	ClCG11G008240	Watermelon (Charleston Gray)	cpiwcgB112
CSPI02G24900	MELO3C008114.2	Melon (DHL92) v3.6.1	cpimedB112
CSPI02G24900	CsaV3_2G033420	Cucumber (Chinese Long) v3	cpicucB081
CSPI02G24900	Cla97C11G215330	Watermelon (97103) v2	cpiwmbB106
CSPI02G24900	Bhi04G002061	Wax gourd	cpiwgoB161
CSPI02G24900	Cucsa.088380	Cucumber (Gy14) v1	cgycpiB093
CSPI02G24900	CmaCh15G000290	Cucurbita maxima (Rimu)	cmacpiB281
CSPI02G24900	CmaCh04G030110	Cucurbita maxima (Rimu)	cmacpiB702
CSPI02G24900	CmoCh04G031320	Cucurbita moschata (Rifu)	cmocpiB695
CSPI02G24900	CmoCh15G000270	Cucurbita moschata (Rifu)	cmocpiB271
CSPI02G24900	Cp4.1LG13g11570	Cucurbita pepo (Zucchini)	cpecpiB168
CSPI02G24900	Carg22868	Silver-seed gourd	carcpiB1119
CSPI02G24900	Carg06085	Silver-seed gourd	carcpiB0018

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CSPI02G24900	Cucurbita pepo (Zucchini)	cpecpiB385
CSPI02G24900	Bottle gourd (USVL1VR-Ls)	cpilsiB113
CSPI02G24900	Cucumber (Gy14) v2	cgybcpiB057