Carg05997 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg05997
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	immediate early response 3-interacting protein 1-like
Location	Cucurbita_argyrosperma_scaffold_026 : 607153 .. 608298 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TAAGATTTGAATAAAGAAAAAGAAAGCATTTTGTGATGCAATTGTAACAGGTTGTGCGGGTCATTCTCGGGTTCACTCTGCGATCTGTAGCGGCTTCACAACCGGCCATTTCCAACTCCTCCGCTCTCTCCGATCAGGTACCGGCAGCCTTATAAATCTTAGTCACGTTTCTCCTTCACGCATCTTAGATTTTGATTCTTTCGCCTCCTTGGGATTTAGGTTTCAGATCTATGCTTCTTCATCGCTTCATCGATTATTGGGCGCACGATTGCTTGTTTGAATTTCATTTTCTTTAATCGATTGCAGCAACATGTAATTGTTATAATGTCGAATTACATGGTTGTATGGTTACAATTTGTGGAGATTAATTTCAGAGTATGGAATTCTGTATCTTTTGGAGGACTGTTCCCCGAGTTTTTGAAAGAAAATTAGGCGAAATTATTGAAAATCTCAAGTTTTGGGGTGGGAGAATAGCTACTGTTTACTCCCTCTTTGTTTCTTTTTTTTTGAAAATTTGGTGATCATGGTTACATAGCCACTGCATTTTGGCTATAATCATCAAACTTTAGTTCATCCCCCATTTTAAGATCATTAGATATTATCATCATCTTTGGAAATGAGTGAATCCAATTCCTGTGCTGCCCAGGCTTCTTAATCCATCATTCTGTTGTTTGCATCATCTGCTATCTTGTAAGATTATTTGGCGTGTTATGTTTTTGTTGAGCAGGTTCTTTGCAACACAGATAATAAATGGGATTGTGGACACTTCTAGAAGGCTGCCTGCTACTCGCCAATGCTCTAGCGATTCTAAACGAAGATCGGTTTCTTGCTCCTAGAGGATGGAGCTTCTCAGACTTCTCAGGCGGCAGAACCAAGTCATTCAGGGGGCAGCTTATAGGGCTTATCTATGCAACACAATATCTAAGAGTTCCTCTCATGATGCTCAATGTCATCTGCATCTTTGTCAAATTGGTATCAGGATGATAACTACCGTTGTGGCAGGTTTGCACTTCCTTCCATTTTGAGAAAGTATTTCCGGTGTATTGTTCTTGATTTAGTATGGCCTTTGTTGGTTTGAATGTAACGAACAATAGGCTGCTATGAGATAACTATAACATCTGAGAGTTAGAAACATGCATTTTCATA

mRNA sequence

TAAGATTTGAATAAAGAAAAAGAAAGCATTTTGTGATGCAATTGTAACAGGTTGTGCGGGTCATTCTCGGGTTCACTCTGCGATCTGTAGCGGCTTCACAACCGGCCATTTCCAACTCCTCCGCTCTCTCCGATCAGCAACATGTAATTGTTATAATGTCGAATTACATGGTTGTATGGTTACAATTTGTGGAGATTAATTTCAGAGTATGGAATTCTGTATCTTTTGGAGGACTGTTCCCCGAGTTCTTTGCAACACAGATAATAAATGGGATTGTGGACACTTCTAGAAGGCTGCCTGCTACTCGCCAATGCTCTAGCGATTCTAAACGAAGATCGGTTTCTTGCTCCTAGAGGATGGAGCTTCTCAGACTTCTCAGGCGGCAGAACCAAGTCATTCAGGGGGCAGCTTATAGGGCTTATCTATGCAACACAATATCTAAGAGTTCCTCTCATGATGCTCAATGTCATCTGCATCTTTGTCAAATTGGTATCAGGATGATAACTACCGTTGTGGCAGGTTTGCACTTCCTTCCATTTTGAGAAAGTATTTCCGGTGTATTGTTCTTGATTTAGTATGGCCTTTGTTGGTTTGAATGTAACGAACAATAGGCTGCTATGAGATAACTATAACATCTGAGAGTTAGAAACATGCATTTTCATA

Coding sequence (CDS)

ATGGGATTGTGGACACTTCTAGAAGGCTGCCTGCTACTCGCCAATGCTCTAGCGATTCTAAACGAAGATCGGTTTCTTGCTCCTAGAGGATGGAGCTTCTCAGACTTCTCAGGCGGCAGAACCAAGTCATTCAGGGGGCAGCTTATAGGGCTTATCTATGCAACACAATATCTAAGAGTTCCTCTCATGATGCTCAATGTCATCTGCATCTTTGTCAAATTGGTATCAGGATGA

Protein sequence

MGLWTLLEGCLLLANALAILNEDRFLAPRGWSFSDFSGGRTKSFRGQLIGLIYATQYLRVPLMMLNVICIFVKLVSG

Homology

[Close]

BLAST of Carg05997 vs. NCBI nr
Match: XP_022961355.1 (immediate early response 3-interacting protein 1-like [Cucurbita moschata] >XP_022990750.1 immediate early response 3-interacting protein 1-like [Cucurbita maxima] >XP_023553530.1 immediate early response 3-interacting protein 1-like [Cucurbita pepo subsp. pepo] >XP_023553538.1 immediate early response 3-interacting protein 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 154.8 bits (390), Expect = 1.2e-34
Identity = 77/77 (100.00%), Postives = 77/77 (100.00%), Query Frame = 0


Query: 1  MGLWTLLEGCLLLANALAILNEDRFLAPRGWSFSDFSGGRTKSFRGQLIGLIYATQYLRV 60
          MGLWTLLEGCLLLANALAILNEDRFLAPRGWSFSDFSGGRTKSFRGQLIGLIYATQYLRV
Sbjct: 1  MGLWTLLEGCLLLANALAILNEDRFLAPRGWSFSDFSGGRTKSFRGQLIGLIYATQYLRV 60

Query: 61 PLMMLNVICIFVKLVSG 78
          PLMMLNVICIFVKLVSG
Sbjct: 61 PLMMLNVICIFVKLVSG 77

[Close]

BLAST of Carg05997 vs. NCBI nr
Match: XP_022133684.1 (immediate early response 3-interacting protein 1-like [Momordica charantia] >XP_022133685.1 immediate early response 3-interacting protein 1-like [Momordica charantia])

HSP 1 Score: 146.7 bits (369), Expect = 3.1e-32
Identity = 72/77 (93.51%), Postives = 75/77 (97.40%), Query Frame = 0


Query: 1  MGLWTLLEGCLLLANALAILNEDRFLAPRGWSFSDFSGGRTKSFRGQLIGLIYATQYLRV 60
          MGLWTLLEGCLLLANALAILNEDRFLAPRGWSFSDFSGGRTKSF+GQLIGL YATQYLRV
Sbjct: 1  MGLWTLLEGCLLLANALAILNEDRFLAPRGWSFSDFSGGRTKSFKGQLIGLTYATQYLRV 60

Query: 61 PLMMLNVICIFVKLVSG 78
          PL+MLN ICIF+KLVSG
Sbjct: 61 PLIMLNSICIFLKLVSG 77

[Close]

BLAST of Carg05997 vs. NCBI nr
Match: XP_012088078.1 (immediate early response 3-interacting protein 1 [Jatropha curcas] >XP_012088085.1 immediate early response 3-interacting protein 1 [Jatropha curcas])

HSP 1 Score: 144.1 bits (362), Expect = 2.0e-31
Identity = 70/77 (90.91%), Postives = 75/77 (97.40%), Query Frame = 0


Query: 1  MGLWTLLEGCLLLANALAILNEDRFLAPRGWSFSDFSGGRTKSFRGQLIGLIYATQYLRV 60
          MGLWTLLEGCLLLANALAILNEDRFLAPRGWSFS+FSGGRTKSF+GQLIGLIYATQY+RV
Sbjct: 1  MGLWTLLEGCLLLANALAILNEDRFLAPRGWSFSEFSGGRTKSFKGQLIGLIYATQYMRV 60

Query: 61 PLMMLNVICIFVKLVSG 78
          PL++LN ICI VKLVSG
Sbjct: 61 PLIILNAICIVVKLVSG 77

[Close]

BLAST of Carg05997 vs. NCBI nr
Match: XP_022134292.1 (immediate early response 3-interacting protein 1-like [Momordica charantia] >XP_022134293.1 immediate early response 3-interacting protein 1-like [Momordica charantia])

HSP 1 Score: 144.1 bits (362), Expect = 2.0e-31
Identity = 72/77 (93.51%), Postives = 75/77 (97.40%), Query Frame = 0


Query: 1  MGLWTLLEGCLLLANALAILNEDRFLAPRGWSFSDFSGGRTKSFRGQLIGLIYATQYLRV 60
          MGLWTLLEGCLLLANALAILNEDRFLAPRG SFS+FSGGRTKSF+GQLIGLIYATQYLRV
Sbjct: 1  MGLWTLLEGCLLLANALAILNEDRFLAPRGLSFSEFSGGRTKSFKGQLIGLIYATQYLRV 60

Query: 61 PLMMLNVICIFVKLVSG 78
          PL+MLN ICIFVKLVSG
Sbjct: 61 PLIMLNAICIFVKLVSG 77

[Close]

BLAST of Carg05997 vs. NCBI nr
Match: CBI31551.3 (unnamed protein product, partial [Vitis vinifera])

HSP 1 Score: 143.7 bits (361), Expect = 2.7e-31
Identity = 69/77 (89.61%), Postives = 75/77 (97.40%), Query Frame = 0


Query: 1  MGLWTLLEGCLLLANALAILNEDRFLAPRGWSFSDFSGGRTKSFRGQLIGLIYATQYLRV 60
          MGLWTLLEGCLL+ANALAILNEDRFLAPRGWSFS+FSGGRTKSF+GQLIGLIYATQYLRV
Sbjct: 12 MGLWTLLEGCLLIANALAILNEDRFLAPRGWSFSEFSGGRTKSFKGQLIGLIYATQYLRV 71

Query: 61 PLMMLNVICIFVKLVSG 78
          PL++LN ICI +KLVSG
Sbjct: 72 PLILLNSICIIIKLVSG 88

[Close]

BLAST of Carg05997 vs. TAIR10
Match: AT2G37975.1 (Yos1-like protein)

HSP 1 Score: 96.3 bits (238), Expect = 8.9e-21
Identity = 47/78 (60.26%), Postives = 60/78 (76.92%), Query Frame = 0


Query: 1  MGLWTLLEGCLLLANALAILNEDRFLAPRGWSFSDF-SGGRTKSFRGQLIGLIYATQYLR 60
          MG WTL+EG LL ANALAILNEDRFLAP+GW+ ++    G+  S +GQ+IGLI+A  Y+R
Sbjct: 1  MGFWTLMEGLLLFANALAILNEDRFLAPKGWTLAELHQTGKRNSLKGQIIGLIHACHYMR 60

Query: 61 VPLMMLNVICIFVKLVSG 78
          +PLM+ N+I I  KL SG
Sbjct: 61 LPLMLFNLIVIVFKLFSG 78

[Close]

BLAST of Carg05997 vs. TAIR10
Match: AT3G54085.1 (Yos1-like protein)

HSP 1 Score: 94.4 bits (233), Expect = 3.4e-20
Identity = 47/78 (60.26%), Postives = 59/78 (75.64%), Query Frame = 0


Query: 1  MGLWTLLEGCLLLANALAILNEDRFLAPRGWSFSDF-SGGRTKSFRGQLIGLIYATQYLR 60
          MG WTLL+G LL ANALAILNEDRFL PRGW+  +     R  S +GQ+IGLI+A QY+R
Sbjct: 1  MGFWTLLKGLLLFANALAILNEDRFLVPRGWTLGELHQTDRRNSPKGQIIGLIHACQYMR 60

Query: 61 VPLMMLNVICIFVKLVSG 78
          +PLM++N   I +KL+SG
Sbjct: 61 LPLMLINTAVIVLKLISG 78

[Close]

BLAST of Carg05997 vs. Swiss-Prot
Match: sp|Q3B8G7|IR3IP_XENLA (Immediate early response 3-interacting protein 1 OS=Xenopus laevis OX=8355 GN=ier3ip1 PE=3 SV=1)

HSP 1 Score: 50.4 bits (119), Expect = 1.0e-05
Identity = 30/78 (38.46%), Postives = 48/78 (61.54%), Query Frame = 0


Query: 3  LWTLLEGCLLLANALAILNEDRFLAPRGWSFSDFSG--GRTKSFRGQLIGLIYATQ-YLR 62
          L+TLL+  LL  NA+A+L+E+RFL+  GW      G  G     + QL+ LI + +  +R
Sbjct: 5  LYTLLQAALLCVNAVAVLHEERFLSKIGWGVDHGIGGFGEEPGMKSQLMNLIRSVRTVMR 64

Query: 63 VPLMMLNVICIFVKLVSG 78
          VPL+++N + I + L+ G
Sbjct: 65 VPLIIVNSVTIVLLLLFG 82

[Close]

BLAST of Carg05997 vs. Swiss-Prot
Match: sp|Q4VBI2|IR3IP_DANRE (Immediate early response 3-interacting protein 1 OS=Danio rerio OX=7955 GN=ier3ip1 PE=3 SV=1)

HSP 1 Score: 49.7 bits (117), Expect = 1.7e-05
Identity = 28/78 (35.90%), Postives = 47/78 (60.26%), Query Frame = 0


Query: 3  LWTLLEGCLLLANALAILNEDRFLAPRGWSFSDFSG--GRTKSFRGQLIGLIYATQ-YLR 62
          L+ L++  +L  NA+A+L+E+RFL+  GW      G  G     + QL+ LI + +  +R
Sbjct: 5  LYALIQTAILFTNAIAVLHEERFLSKIGWGAEQGVGGFGDDPGIKAQLLNLIRSVRTVMR 64

Query: 63 VPLMMLNVICIFVKLVSG 78
          VPL+ +N +CI + L+ G
Sbjct: 65 VPLIAVNSVCIVLLLLFG 82

[Close]

BLAST of Carg05997 vs. Swiss-Prot
Match: sp|Q1JQC2|IR3IP_BOVIN (Immediate early response 3-interacting protein 1 OS=Bos taurus OX=9913 GN=IER3IP1 PE=3 SV=1)

HSP 1 Score: 48.9 bits (115), Expect = 2.9e-05
Identity = 30/78 (38.46%), Postives = 47/78 (60.26%), Query Frame = 0


Query: 3  LWTLLEGCLLLANALAILNEDRFLAPRGWSFSDFSG--GRTKSFRGQLIGLIYATQ-YLR 62
          L++LL+  LL  NA+A+L+E+RFL   GW      G  G     + QL+ LI + +  +R
Sbjct: 5  LYSLLQAALLCVNAIAVLHEERFLKNIGWGTDQGIGGFGEEPGIKSQLMNLIRSVRTVMR 64

Query: 63 VPLMMLNVICIFVKLVSG 78
          VPL+++N I I + L+ G
Sbjct: 65 VPLIIVNSIAIVLLLLFG 82

[Close]

BLAST of Carg05997 vs. Swiss-Prot
Match: sp|Q9Y5U9|IR3IP_HUMAN (Immediate early response 3-interacting protein 1 OS=Homo sapiens OX=9606 GN=IER3IP1 PE=1 SV=1)

HSP 1 Score: 48.9 bits (115), Expect = 2.9e-05
Identity = 30/78 (38.46%), Postives = 47/78 (60.26%), Query Frame = 0


Query: 3  LWTLLEGCLLLANALAILNEDRFLAPRGWSFSDFSG--GRTKSFRGQLIGLIYATQ-YLR 62
          L++LL+  LL  NA+A+L+E+RFL   GW      G  G     + QL+ LI + +  +R
Sbjct: 5  LYSLLQAALLCVNAIAVLHEERFLKNIGWGTDQGIGGFGEEPGIKSQLMNLIRSVRTVMR 64

Query: 63 VPLMMLNVICIFVKLVSG 78
          VPL+++N I I + L+ G
Sbjct: 65 VPLIIVNSIAIVLLLLFG 82

[Close]

BLAST of Carg05997 vs. Swiss-Prot
Match: sp|P85007|IR3IP_RAT (Immediate early response 3-interacting protein 1 OS=Rattus norvegicus OX=10116 GN=Ier3ip1 PE=3 SV=1)

HSP 1 Score: 48.1 bits (113), Expect = 5.0e-05
Identity = 29/78 (37.18%), Postives = 47/78 (60.26%), Query Frame = 0


Query: 3  LWTLLEGCLLLANALAILNEDRFLAPRGWSFSDFSG--GRTKSFRGQLIGLIYATQ-YLR 62
          L++L++  LL  NA+A+L+E+RFL   GW      G  G     + QL+ LI + +  +R
Sbjct: 5  LYSLMQAALLCVNAIAVLHEERFLKNIGWGTDQGIGGFGEEPGIKSQLLNLIRSVRTVMR 64

Query: 63 VPLMMLNVICIFVKLVSG 78
          VPL+++N I I + L+ G
Sbjct: 65 VPLIIVNSITIVLLLLFG 82

[Close]

BLAST of Carg05997 vs. TrEMBL
Match: tr|A0A2I4ER97|A0A2I4ER97_9ROSI (immediate early response 3-interacting protein 1-like OS=Juglans regia OX=51240 GN=LOC108991940 PE=4 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 1.8e-31
Identity = 70/77 (90.91%), Postives = 75/77 (97.40%), Query Frame = 0


Query: 1  MGLWTLLEGCLLLANALAILNEDRFLAPRGWSFSDFSGGRTKSFRGQLIGLIYATQYLRV 60
          MGLWTLLEGCLLLANALAILNEDRFLAPRGWSFS+FSGG+TKSF+GQLIGLIYATQYLRV
Sbjct: 1  MGLWTLLEGCLLLANALAILNEDRFLAPRGWSFSEFSGGKTKSFKGQLIGLIYATQYLRV 60

Query: 61 PLMMLNVICIFVKLVSG 78
          PL++LN ICI VKLVSG
Sbjct: 61 PLILLNFICIVVKLVSG 77

[Close]

BLAST of Carg05997 vs. TrEMBL
Match: tr|D7TMI4|D7TMI4_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_13s0019g03230 PE=4 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 1.8e-31
Identity = 69/77 (89.61%), Postives = 75/77 (97.40%), Query Frame = 0


Query: 1  MGLWTLLEGCLLLANALAILNEDRFLAPRGWSFSDFSGGRTKSFRGQLIGLIYATQYLRV 60
          MGLWTLLEGCLL+ANALAILNEDRFLAPRGWSFS+FSGGRTKSF+GQLIGLIYATQYLRV
Sbjct: 12 MGLWTLLEGCLLIANALAILNEDRFLAPRGWSFSEFSGGRTKSFKGQLIGLIYATQYLRV 71

Query: 61 PLMMLNVICIFVKLVSG 78
          PL++LN ICI +KLVSG
Sbjct: 72 PLILLNSICIIIKLVSG 88

[Close]

BLAST of Carg05997 vs. TrEMBL
Match: tr|A0A0A0KBI3|A0A0A0KBI3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G009360 PE=4 SV=1)

HSP 1 Score: 142.9 bits (359), Expect = 3.0e-31
Identity = 71/77 (92.21%), Postives = 75/77 (97.40%), Query Frame = 0


Query: 1  MGLWTLLEGCLLLANALAILNEDRFLAPRGWSFSDFSGGRTKSFRGQLIGLIYATQYLRV 60
          MGLWTLLEGCLLLANALAILNEDRFLAPRG +FS+FSGGRTKSF+GQLIGLIYATQYLRV
Sbjct: 1  MGLWTLLEGCLLLANALAILNEDRFLAPRGLNFSEFSGGRTKSFKGQLIGLIYATQYLRV 60

Query: 61 PLMMLNVICIFVKLVSG 78
          PL+MLN ICIFVKLVSG
Sbjct: 61 PLIMLNAICIFVKLVSG 77

[Close]

BLAST of Carg05997 vs. TrEMBL
Match: tr|A0A1S3B419|A0A1S3B419_CUCME (immediate early response 3-interacting protein 1-like OS=Cucumis melo OX=3656 GN=LOC103485539 PE=4 SV=1)

HSP 1 Score: 142.5 bits (358), Expect = 3.9e-31
Identity = 70/77 (90.91%), Postives = 75/77 (97.40%), Query Frame = 0


Query: 1  MGLWTLLEGCLLLANALAILNEDRFLAPRGWSFSDFSGGRTKSFRGQLIGLIYATQYLRV 60
          MGLWTLLEGCLLLANALAILNEDRFLAPRG +FS+FSGGRTKSF+GQLIGLIYATQYLRV
Sbjct: 1  MGLWTLLEGCLLLANALAILNEDRFLAPRGLNFSEFSGGRTKSFKGQLIGLIYATQYLRV 60

Query: 61 PLMMLNVICIFVKLVSG 78
          PL+MLN ICIFVKL+SG
Sbjct: 61 PLIMLNAICIFVKLISG 77

[Close]

BLAST of Carg05997 vs. TrEMBL
Match: tr|A0A1U8PCM2|A0A1U8PCM2_GOSHI (immediate early response 3-interacting protein 1-like OS=Gossypium hirsutum OX=3635 GN=LOC107957118 PE=4 SV=1)

HSP 1 Score: 142.1 bits (357), Expect = 5.1e-31
Identity = 70/77 (90.91%), Postives = 74/77 (96.10%), Query Frame = 0


Query: 1  MGLWTLLEGCLLLANALAILNEDRFLAPRGWSFSDFSGGRTKSFRGQLIGLIYATQYLRV 60
          MGLWTLLEG LLLANALAILNEDRFLAPRGWSFSDFS GRTKSF+GQLIGLIYATQY+RV
Sbjct: 1  MGLWTLLEGFLLLANALAILNEDRFLAPRGWSFSDFSAGRTKSFKGQLIGLIYATQYMRV 60

Query: 61 PLMMLNVICIFVKLVSG 78
          PL++LN ICIFVKLVSG
Sbjct: 61 PLILLNAICIFVKLVSG 77

The following BLAST results are available for this feature:

BLAST of Carg05997 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022961355.1	1.2e-34	100.00	immediate early response 3-interacting protein 1-like [Cucurbita moschata] >XP_0...	[more]
XP_022133684.1	3.1e-32	93.51	immediate early response 3-interacting protein 1-like [Momordica charantia] >XP_...	[more]
XP_012088078.1	2.0e-31	90.91	immediate early response 3-interacting protein 1 [Jatropha curcas] >XP_012088085...	[more]
XP_022134292.1	2.0e-31	93.51	immediate early response 3-interacting protein 1-like [Momordica charantia] >XP_...	[more]
CBI31551.3	2.7e-31	89.61	unnamed protein product, partial [Vitis vinifera]	[more]

BLAST of Carg05997 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G37975.1	8.9e-21	60.26	Yos1-like protein	[more]
AT3G54085.1	3.4e-20	60.26	Yos1-like protein	[more]

BLAST of Carg05997 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q3B8G7\|IR3IP_XENLA	1.0e-05	38.46	Immediate early response 3-interacting protein 1 OS=Xenopus laevis OX=8355 GN=ie...	[more]
sp\|Q4VBI2\|IR3IP_DANRE	1.7e-05	35.90	Immediate early response 3-interacting protein 1 OS=Danio rerio OX=7955 GN=ier3i...	[more]
sp\|Q1JQC2\|IR3IP_BOVIN	2.9e-05	38.46	Immediate early response 3-interacting protein 1 OS=Bos taurus OX=9913 GN=IER3IP...	[more]
sp\|Q9Y5U9\|IR3IP_HUMAN	2.9e-05	38.46	Immediate early response 3-interacting protein 1 OS=Homo sapiens OX=9606 GN=IER3...	[more]
sp\|P85007\|IR3IP_RAT	5.0e-05	37.18	Immediate early response 3-interacting protein 1 OS=Rattus norvegicus OX=10116 G...	[more]

BLAST of Carg05997 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A2I4ER97\|A0A2I4ER97_9ROSI	1.8e-31	90.91	immediate early response 3-interacting protein 1-like OS=Juglans regia OX=51240 ...	[more]
tr\|D7TMI4\|D7TMI4_VITVI	1.8e-31	89.61	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_13s0019g03230 PE=4 SV=...	[more]
tr\|A0A0A0KBI3\|A0A0A0KBI3_CUCSA	3.0e-31	92.21	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G009360 PE=4 SV=1	[more]
tr\|A0A1S3B419\|A0A1S3B419_CUCME	3.9e-31	90.91	immediate early response 3-interacting protein 1-like OS=Cucumis melo OX=3656 GN...	[more]
tr\|A0A1U8PCM2\|A0A1U8PCM2_GOSHI	5.1e-31	90.91	immediate early response 3-interacting protein 1-like OS=Gossypium hirsutum OX=3...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR013880	Yos1

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg05997-RA	Carg05997-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013880	Yos1-like	PFAM	PF08571	Yos1	coord: 3..77 e-value: 1.8E-23 score: 82.5
IPR013880	Yos1-like	PANTHER	PTHR15858	UNCHARACTERIZED	coord: 1..77
None	No IPR available	PANTHER	PTHR15858:SF2	SUBFAMILY NOT NAMED	coord: 1..77

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg05997	MELO3C009201	Melon (DHL92) v3.5.1	carmeB0024
Carg05997	ClCG10G021700	Watermelon (Charleston Gray)	carwcgB0018
Carg05997	Cucsa.176020	Cucumber (Gy14) v1	carcgyB0022
Carg05997	CmaCh14G000940	Cucurbita maxima (Rimu)	carcmaB0028
Carg05997	CmoCh14G000890	Cucurbita moschata (Rifu)	carcmoB0029
Carg05997	MELO3C009201.2	Melon (DHL92) v3.6.1	carmedB0025
Carg05997	Bhi11G001595	Wax gourd	carwgoB0017

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg05997	Wax gourd	carwgoB0022
Carg05997	Silver-seed gourd	carcarB016
Carg05997	Silver-seed gourd	carcarB020
Carg05997	Silver-seed gourd	carcarB022
Carg05997	Silver-seed gourd	carcarB023
Carg05997	Silver-seed gourd	carcarB025
Carg05997	Silver-seed gourd	carcarB026
Carg05997	Cucumber (Gy14) v2	carcgybB0020
Carg05997	Cucumber (Gy14) v2	carcgybB0018
Carg05997	Cucumber (Gy14) v2	carcgybB0023
Carg05997	Cucumber (Gy14) v1	carcgyB0015
Carg05997	Cucumber (Gy14) v1	carcgyB0019
Carg05997	Cucurbita maxima (Rimu)	carcmaB0030
Carg05997	Cucurbita maxima (Rimu)	carcmaB0031
Carg05997	Cucurbita maxima (Rimu)	carcmaB0033
Carg05997	Cucurbita maxima (Rimu)	carcmaB0034
Carg05997	Cucurbita maxima (Rimu)	carcmaB0035
Carg05997	Cucurbita moschata (Rifu)	carcmoB0031
Carg05997	Cucurbita moschata (Rifu)	carcmoB0033
Carg05997	Cucurbita moschata (Rifu)	carcmoB0034
Carg05997	Cucurbita pepo (Zucchini)	carcpeB0031
Carg05997	Cucurbita pepo (Zucchini)	carcpeB0034
Carg05997	Cucurbita pepo (Zucchini)	carcpeB0035
Carg05997	Cucurbita pepo (Zucchini)	carcpeB0036
Carg05997	Wild cucumber (PI 183967)	carcpiB0019
Carg05997	Wild cucumber (PI 183967)	carcpiB0021
Carg05997	Wild cucumber (PI 183967)	carcpiB0024
Carg05997	Cucumber (Chinese Long) v2	carcuB0019
Carg05997	Cucumber (Chinese Long) v2	carcuB0023
Carg05997	Cucumber (Chinese Long) v3	carcucB0019
Carg05997	Cucumber (Chinese Long) v3	carcucB0021
Carg05997	Cucumber (Chinese Long) v3	carcucB0024
Carg05997	Bottle gourd (USVL1VR-Ls)	carlsiB016
Carg05997	Bottle gourd (USVL1VR-Ls)	carlsiB017
Carg05997	Bottle gourd (USVL1VR-Ls)	carlsiB020
Carg05997	Melon (DHL92) v3.5.1	carmeB0023
Carg05997	Melon (DHL92) v3.6.1	carmedB0024
Carg05997	Watermelon (Charleston Gray)	carwcgB0019
Carg05997	Watermelon (Charleston Gray)	carwcgB0025
Carg05997	Watermelon (97103) v1	carwmB0017
Carg05997	Watermelon (97103) v1	carwmB0020
Carg05997	Watermelon (97103) v1	carwmB0024
Carg05997	Watermelon (97103) v2	carwmbB0014
Carg05997	Watermelon (97103) v2	carwmbB0015
Carg05997	Watermelon (97103) v2	carwmbB0021
Carg05997	Watermelon (97103) v2	carwmbB0022