Carg05883 (gene) Silver-seed gourd

Overview
NameCarg05883
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
Descriptiontranscription initiation factor TFIID subunit 8
LocationCucurbita_argyrosperma_scaffold_026 : 56341 .. 57474 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAACGATGGAGGTGGGGAGAGTGGAAAAGTGCATGAACGACCAAAGACGAGAAAGAATTTGGGCGGTGAGGACTTCCCACAGGCGCTTGCCAAGATTGCTGTAGCTCAAATATGTGAGAGTGAGGGGTTTCAAACCTTTCAGCAGTCTGCCCTTGAAACACTGGCTGACATTGCAGTTCGGTATGTTCAGAATATAGGAAAGACTGCAAACTTCTGTGCTAATTTTGCTGGCAGAACAGAGTGTAATGTGTTCGATATAATTCAAGCACTGGAAGATTTGGGGTCAGTCCAAGGATTTGCAGGTGCTTTGGATATTGAGCATTGTCTCGCAAGTTCCAGCACAGTTAAAGAGATTGCTCGTTATGTTGCTCAAGCGGAAGAAATACCATTTGCATACGCAGTTCCCAAATTTCCAGTTGTCAAAGAGCGAAAGCTGAGGCCTACTTTTTTGCAAATTGGGGAAGAAACTCCTGGAAAGCATATACCTTCTTGGTTGCCTGCACTTCCTGATCCCGAAACATACATCGCGTCCCCCACTGTGGAGGAAAAAGTAGTGGAGCCTCAAAAAATTAAAACTGAGCCAGAAAAACAATGTAAGAGCGCAGAAAAATCGTTATGGAATCTGCAGCAGTGGTTGTTTTGCAATGGATTGGAAGGATCCCGGAGAGAAGGCCCTAGAAATGCAGCTATGACCAAACAAACACAAGAAAGTAACCCATTTCTTGCTCCCCCCCTGCAATTTGGTGAGAAGGAAGTTTCTTCTGTCGTTCTTCCAGATAGGATATTGAACAATTCGAGTACAGAATATCCTGTCCCTGCCAGGGAGAACTGTCTTGTGGATACCCATGTCTCAGTGCTGGAGACTTTTGCTCCAGCTATTGAATCATTGAAGAACAGTTTGCACGATTCTGAGGAAAAGTTCTCTCTGAACAGGCGATCCACTGTGCAGTTCAAGATTGGGACTGGAAAGAAGCCTGAAAGTAGCATGATAGAATTGAAGGCGCTAAACAATGGTGTGAAGAACTCTTCATCCTGGTTTGTAGGGGATGATAAGAAGGATGACAAGAAAAGAAAGGCCGAGAAGATTCTGAAGAACTCAATTGAGAACTCCAATGAGCTATATCAGTTGTAA

mRNA sequence

ATGAACGATGGAGGTGGGGAGAGTGGAAAAGTGCATGAACGACCAAAGACGAGAAAGAATTTGGGCGGTGAGGACTTCCCACAGGCGCTTGCCAAGATTGCTGTAGCTCAAATATGTGAGAGTGAGGGGTTTCAAACCTTTCAGCAGTCTGCCCTTGAAACACTGGCTGACATTGCAGTTCGGTATGTTCAGAATATAGGAAAGACTGCAAACTTCTGTGCTAATTTTGCTGGCAGAACAGAGTGTAATGTGTTCGATATAATTCAAGCACTGGAAGATTTGGGGTCAGTCCAAGGATTTGCAGGTGCTTTGGATATTGAGCATTGTCTCGCAAGTTCCAGCACAGTTAAAGAGATTGCTCGTTATGTTGCTCAAGCGGAAGAAATACCATTTGCATACGCAGTTCCCAAATTTCCAGTTGTCAAAGAGCGAAAGCTGAGGCCTACTTTTTTGCAAATTGGGGAAGAAACTCCTGGAAAGCATATACCTTCTTGGTTGCCTGCACTTCCTGATCCCGAAACATACATCGCGTCCCCCACTGTGGAGGAAAAAGTAGTGGAGCCTCAAAAAATTAAAACTGAGCCAGAAAAACAATGTAAGAGCGCAGAAAAATCGTTATGGAATCTGCAGCAGTGGTTGTTTTGCAATGGATTGGAAGGATCCCGGAGAGAAGGCCCTAGAAATGCAGCTATGACCAAACAAACACAAGAAAGTAACCCATTTCTTGCTCCCCCCCTGCAATTTGGTGAGAAGGAAGTTTCTTCTGTCGTTCTTCCAGATAGGATATTGAACAATTCGAGTACAGAATATCCTGTCCCTGCCAGGGAGAACTGTCTTGTGGATACCCATGTCTCAGTGCTGGAGACTTTTGCTCCAGCTATTGAATCATTGAAGAACAGTTTGCACGATTCTGAGGAAAAGTTCTCTCTGAACAGGCGATCCACTGTGCAGTTCAAGATTGGGACTGGAAAGAAGCCTGAAAGTAGCATGATAGAATTGAAGGCGCTAAACAATGGTGTGAAGAACTCTTCATCCTGGTTTGTAGGGGATGATAAGAAGGATGACAAGAAAAGAAAGGCCGAGAAGATTCTGAAGAACTCAATTGAGAACTCCAATGAGCTATATCAGTTGTAA

Coding sequence (CDS)

ATGAACGATGGAGGTGGGGAGAGTGGAAAAGTGCATGAACGACCAAAGACGAGAAAGAATTTGGGCGGTGAGGACTTCCCACAGGCGCTTGCCAAGATTGCTGTAGCTCAAATATGTGAGAGTGAGGGGTTTCAAACCTTTCAGCAGTCTGCCCTTGAAACACTGGCTGACATTGCAGTTCGGTATGTTCAGAATATAGGAAAGACTGCAAACTTCTGTGCTAATTTTGCTGGCAGAACAGAGTGTAATGTGTTCGATATAATTCAAGCACTGGAAGATTTGGGGTCAGTCCAAGGATTTGCAGGTGCTTTGGATATTGAGCATTGTCTCGCAAGTTCCAGCACAGTTAAAGAGATTGCTCGTTATGTTGCTCAAGCGGAAGAAATACCATTTGCATACGCAGTTCCCAAATTTCCAGTTGTCAAAGAGCGAAAGCTGAGGCCTACTTTTTTGCAAATTGGGGAAGAAACTCCTGGAAAGCATATACCTTCTTGGTTGCCTGCACTTCCTGATCCCGAAACATACATCGCGTCCCCCACTGTGGAGGAAAAAGTAGTGGAGCCTCAAAAAATTAAAACTGAGCCAGAAAAACAATGTAAGAGCGCAGAAAAATCGTTATGGAATCTGCAGCAGTGGTTGTTTTGCAATGGATTGGAAGGATCCCGGAGAGAAGGCCCTAGAAATGCAGCTATGACCAAACAAACACAAGAAAGTAACCCATTTCTTGCTCCCCCCCTGCAATTTGGTGAGAAGGAAGTTTCTTCTGTCGTTCTTCCAGATAGGATATTGAACAATTCGAGTACAGAATATCCTGTCCCTGCCAGGGAGAACTGTCTTGTGGATACCCATGTCTCAGTGCTGGAGACTTTTGCTCCAGCTATTGAATCATTGAAGAACAGTTTGCACGATTCTGAGGAAAAGTTCTCTCTGAACAGGCGATCCACTGTGCAGTTCAAGATTGGGACTGGAAAGAAGCCTGAAAGTAGCATGATAGAATTGAAGGCGCTAAACAATGGTGTGAAGAACTCTTCATCCTGGTTTGTAGGGGATGATAAGAAGGATGACAAGAAAAGAAAGGCCGAGAAGATTCTGAAGAACTCAATTGAGAACTCCAATGAGCTATATCAGTTGTAA

Protein sequence

MNDGGGESGKVHERPKTRKNLGGEDFPQALAKIAVAQICESEGFQTFQQSALETLADIAVRYVQNIGKTANFCANFAGRTECNVFDIIQALEDLGSVQGFAGALDIEHCLASSSTVKEIARYVAQAEEIPFAYAVPKFPVVKERKLRPTFLQIGEETPGKHIPSWLPALPDPETYIASPTVEEKVVEPQKIKTEPEKQCKSAEKSLWNLQQWLFCNGLEGSRREGPRNAAMTKQTQESNPFLAPPLQFGEKEVSSVVLPDRILNNSSTEYPVPARENCLVDTHVSVLETFAPAIESLKNSLHDSEEKFSLNRRSTVQFKIGTGKKPESSMIELKALNNGVKNSSSWFVGDDKKDDKKRKAEKILKNSIENSNELYQL
Homology
[Close]
BLAST of Carg05883 vs. NCBI nr
Match: XP_023538136.1 (transcription initiation factor TFIID subunit 8-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 728.4 bits (1879), Expect = 1.2e-206
Identity = 366/377 (97.08%), Postives = 369/377 (97.88%), Query Frame = 0 

Query: 1   MNDGGGESGKVHERPKTRKNLGGEDFPQALAKIAVAQICESEGFQTFQQSALETLADIAV 60
           MNDGGGESGKVHERPKTRKNLGGEDFPQALAKIAVAQICESEGFQTFQQSALETLADIAV
Sbjct: 1   MNDGGGESGKVHERPKTRKNLGGEDFPQALAKIAVAQICESEGFQTFQQSALETLADIAV 60

Query: 61  RYVQNIGKTANFCANFAGRTECNVFDIIQALEDLGSVQGFAGALDIEHCLASSSTVKEIA 120
           RYVQNIGKTANFCANFAGRTECNVFDIIQALEDLGS+QGFAGALDIEHCLASSSTVKEIA
Sbjct: 61  RYVQNIGKTANFCANFAGRTECNVFDIIQALEDLGSIQGFAGALDIEHCLASSSTVKEIA 120

Query: 121 RYVAQAEEIPFAYAVPKFPVVKERKLRPTFLQIGEETPGKHIPSWLPALPDPETYIASPT 180
           RYVAQAEEIPFAYAVPKFPVVKERKLRPTFLQIGEETPGKHIPSWLPALPDPETYIASPT
Sbjct: 121 RYVAQAEEIPFAYAVPKFPVVKERKLRPTFLQIGEETPGKHIPSWLPALPDPETYIASPT 180

Query: 181 VEEKVVEPQKIKTEPEKQCKSAEKSLWNLQQWLFCNGLEGSRREGPRNAAMTKQTQESNP 240
           VEEKVVEPQKIKTEPEKQCKSAEKSLWNLQQWLFCNGLEGSRREGPRNAAMTKQTQESNP
Sbjct: 181 VEEKVVEPQKIKTEPEKQCKSAEKSLWNLQQWLFCNGLEGSRREGPRNAAMTKQTQESNP 240

Query: 241 FLAPPLQFGEKEVSSVVLPDRILNNSSTEYPVPARENCLVDTHVSVLETFAPAIESLKNS 300
           FLAPPLQFGEKEVSSVVLPDRILNNSST+YPVPARENCLVDTHVSVLETFAPAIES+KNS
Sbjct: 241 FLAPPLQFGEKEVSSVVLPDRILNNSSTQYPVPARENCLVDTHVSVLETFAPAIESMKNS 300

Query: 301 LHDSEEKFSLNRRSTVQFKIGTGKKPESSMIELKALNNGVKNSSSWFVGDDKXXXXXXXA 360
           LHDSEEKFSLNRRSTVQFKIGTGKKP SSMIELKALNNGVKNSSSWFVGDDK       A
Sbjct: 301 LHDSEEKFSLNRRSTVQFKIGTGKKPVSSMIELKALNNGVKNSSSWFVGDDKKDDKKRKA 360

Query: 361 EKILKNSIENSNELYQL 378
           EKILKNSIENSNELYQL
Sbjct: 361 EKILKNSIENSNELYQL 377

[Close]
BLAST of Carg05883 vs. NCBI nr
Match: XP_022921494.1 (transcription initiation factor TFIID subunit 8-like [Cucurbita moschata])

HSP 1 Score: 728.0 bits (1878), Expect = 1.6e-206
Identity = 374/377 (99.20%), Postives = 375/377 (99.47%), Query Frame = 0 

Query: 1   MNDGGGESGKVHERPKTRKNLGGEDFPQALAKIAVAQICESEGFQTFQQSALETLADIAV 60
           MNDGGGESGKVHERPKTRKNLGGEDFPQALAKIAVAQICESEGFQTFQQSALETLADIAV
Sbjct: 1   MNDGGGESGKVHERPKTRKNLGGEDFPQALAKIAVAQICESEGFQTFQQSALETLADIAV 60

Query: 61  RYVQNIGKTANFCANFAGRTECNVFDIIQALEDLGSVQGFAGALDIEHCLASSSTVKEIA 120
           RYVQNIGKTANFCANFAGRTECNVFD+IQALEDLGSVQGFAGALDIE CLASSSTVKEIA
Sbjct: 61  RYVQNIGKTANFCANFAGRTECNVFDVIQALEDLGSVQGFAGALDIERCLASSSTVKEIA 120

Query: 121 RYVAQAEEIPFAYAVPKFPVVKERKLRPTFLQIGEETPGKHIPSWLPALPDPETYIASPT 180
           RYVAQAEEIPFAYAVPKFPVVKERKLRPTFLQ GEETPGKHIPSWLPALPDPETYIASPT
Sbjct: 121 RYVAQAEEIPFAYAVPKFPVVKERKLRPTFLQTGEETPGKHIPSWLPALPDPETYIASPT 180

Query: 181 VEEKVVEPQKIKTEPEKQCKSAEKSLWNLQQWLFCNGLEGSRREGPRNAAMTKQTQESNP 240
           VEEKVVEPQKIKTEPEKQCKSAEKSLWNLQQWLFCNGLEGSRREGPRNAAMTKQTQESNP
Sbjct: 181 VEEKVVEPQKIKTEPEKQCKSAEKSLWNLQQWLFCNGLEGSRREGPRNAAMTKQTQESNP 240

Query: 241 FLAPPLQFGEKEVSSVVLPDRILNNSSTEYPVPARENCLVDTHVSVLETFAPAIESLKNS 300
           FLAPPLQFGEKEVSSVVLPDRILNNSSTEYPVPARENCLVDTHVSVLETFAPAIESLKNS
Sbjct: 241 FLAPPLQFGEKEVSSVVLPDRILNNSSTEYPVPARENCLVDTHVSVLETFAPAIESLKNS 300

Query: 301 LHDSEEKFSLNRRSTVQFKIGTGKKPESSMIELKALNNGVKNSSSWFVGDDKXXXXXXXA 360
           LHDSEEKFSLNRRSTVQFKIGTGKKPESSMIELKALNNGVKNSSSWFVGDDKXXXXXXXA
Sbjct: 301 LHDSEEKFSLNRRSTVQFKIGTGKKPESSMIELKALNNGVKNSSSWFVGDDKXXXXXXXA 360

Query: 361 EKILKNSIENSNELYQL 378
           EKILKNSIENSNELYQL
Sbjct: 361 EKILKNSIENSNELYQL 377

[Close]
BLAST of Carg05883 vs. NCBI nr
Match: XP_022990062.1 (transcription initiation factor TFIID subunit 8-like [Cucurbita maxima])

HSP 1 Score: 723.0 bits (1865), Expect = 5.2e-205
Identity = 365/377 (96.82%), Postives = 367/377 (97.35%), Query Frame = 0 

Query: 1   MNDGGGESGKVHERPKTRKNLGGEDFPQALAKIAVAQICESEGFQTFQQSALETLADIAV 60
           MNDGGGESGKVHERPKTRKNLGGEDFPQALAKIA+AQICESEGFQTFQQSALETLADIAV
Sbjct: 1   MNDGGGESGKVHERPKTRKNLGGEDFPQALAKIAIAQICESEGFQTFQQSALETLADIAV 60

Query: 61  RYVQNIGKTANFCANFAGRTECNVFDIIQALEDLGSVQGFAGALDIEHCLASSSTVKEIA 120
           RYVQNIGKTANFCANFAGRTECNVFDIIQALEDLGSVQGFAGALDIEHCLASSSTVKEIA
Sbjct: 61  RYVQNIGKTANFCANFAGRTECNVFDIIQALEDLGSVQGFAGALDIEHCLASSSTVKEIA 120

Query: 121 RYVAQAEEIPFAYAVPKFPVVKERKLRPTFLQIGEETPGKHIPSWLPALPDPETYIASPT 180
           RYVAQAEEIPFAYAVPKFPVVKERKLRPTFLQIGEETPGKHIPSWLPALPDPETYIASPT
Sbjct: 121 RYVAQAEEIPFAYAVPKFPVVKERKLRPTFLQIGEETPGKHIPSWLPALPDPETYIASPT 180

Query: 181 VEEKVVEPQKIKTEPEKQCKSAEKSLWNLQQWLFCNGLEGSRREGPRNAAMTKQTQESNP 240
           VEEKVVEPQKIKTEPEKQCK AEKSLWNLQQ LFCNGLEGSRREGPRNAAMTKQTQESNP
Sbjct: 181 VEEKVVEPQKIKTEPEKQCKGAEKSLWNLQQGLFCNGLEGSRREGPRNAAMTKQTQESNP 240

Query: 241 FLAPPLQFGEKEVSSVVLPDRILNNSSTEYPVPARENCLVDTHVSVLETFAPAIESLKNS 300
           FLAPPLQFGEKEVSSVVLPDRILNNSSTEYPVPARENCLVDTHVSVLETFAPAIES+KNS
Sbjct: 241 FLAPPLQFGEKEVSSVVLPDRILNNSSTEYPVPARENCLVDTHVSVLETFAPAIESMKNS 300

Query: 301 LHDSEEKFSLNRRSTVQFKIGTGKKPESSMIELKALNNGVKNSSSWFVGDDKXXXXXXXA 360
           LHDSEEKFSLNRRSTVQFKIGTGKKP SSMIELKALNNGVKNSSSWFVGDDK       A
Sbjct: 301 LHDSEEKFSLNRRSTVQFKIGTGKKPVSSMIELKALNNGVKNSSSWFVGDDKKDDKKRKA 360

Query: 361 EKILKNSIENSNELYQL 378
           EKILKNSIENSNELYQL
Sbjct: 361 EKILKNSIENSNELYQL 377

[Close]
BLAST of Carg05883 vs. NCBI nr
Match: XP_004141587.1 (PREDICTED: transcription initiation factor TFIID subunit 8 [Cucumis sativus] >KGN52513.1 hypothetical protein Csa_5G639490 [Cucumis sativus])

HSP 1 Score: 639.8 bits (1649), Expect = 5.8e-180
Identity = 318/377 (84.35%), Postives = 345/377 (91.51%), Query Frame = 0 

Query: 1   MNDGGGESGKVHERPKTRKNLGGEDFPQALAKIAVAQICESEGFQTFQQSALETLADIAV 60
           M+DGGGESGKVHERPKTRKNLG EDFP+ALAKIAVAQICESEGFQ FQQSALETLAD+AV
Sbjct: 1   MSDGGGESGKVHERPKTRKNLGSEDFPRALAKIAVAQICESEGFQIFQQSALETLADVAV 60

Query: 61  RYVQNIGKTANFCANFAGRTECNVFDIIQALEDLGSVQGFAGALDIEHCLASSSTVKEIA 120
           RYVQN+G TANFCANFAGRTECN+FDIIQALEDLGSVQGFAGA DIEHCLASSSTVKE A
Sbjct: 61  RYVQNMGSTANFCANFAGRTECNLFDIIQALEDLGSVQGFAGASDIEHCLASSSTVKEFA 120

Query: 121 RYVAQAEEIPFAYAVPKFPVVKERKLRPTFLQIGEETPGKHIPSWLPALPDPETYIASPT 180
           RYVAQAEE+PFAY+VPKFPVVKERKLRP+FLQIGEE PG+HIPSWLPALPDPETYI SP 
Sbjct: 121 RYVAQAEEVPFAYSVPKFPVVKERKLRPSFLQIGEEPPGEHIPSWLPALPDPETYIESPI 180

Query: 181 VEEKVVEPQKIKTEPEKQCKSAEKSLWNLQQWLFCNGLEGSRREGPRNAAMTKQTQESNP 240
           V+E+VVEPQ IKTEPEKQC++ EKS WNLQQWLFCNGLEGS+RE PRNAAMTKQ QESNP
Sbjct: 181 VKEEVVEPQTIKTEPEKQCRT-EKSFWNLQQWLFCNGLEGSQREDPRNAAMTKQIQESNP 240

Query: 241 FLAPPLQFGEKEVSSVVLPDRILNNSSTEYPVPARENCLVDTHVSVLETFAPAIESLKNS 300
           FLAPPLQFGEKEVSS+VLPD++LNNSSTEY VP  ENC VDTHVSVLETFAPAIES+KN+
Sbjct: 241 FLAPPLQFGEKEVSSIVLPDKVLNNSSTEYHVPVMENCQVDTHVSVLETFAPAIESIKNN 300

Query: 301 LHDSEEKFSLNRRSTVQFKIGTGKKPESSMIELKALNNGVKNSSSWFVGDDKXXXXXXXA 360
            H SEEK+SLNR+STVQFKIGTGKK   +MIEL+ALNNGVK SSSWFVG+D+       A
Sbjct: 301 FHMSEEKYSLNRKSTVQFKIGTGKKAAGNMIELRALNNGVKKSSSWFVGEDEKDDKKRKA 360

Query: 361 EKILKNSIENSNELYQL 378
           EKILK+S+ENSNEL  L
Sbjct: 361 EKILKDSMENSNELSHL 376

[Close]
BLAST of Carg05883 vs. NCBI nr
Match: XP_008459385.1 (PREDICTED: transcription initiation factor TFIID subunit 8 [Cucumis melo])

HSP 1 Score: 639.4 bits (1648), Expect = 7.6e-180
Identity = 320/377 (84.88%), Postives = 345/377 (91.51%), Query Frame = 0 

Query: 1   MNDGGGESGKVHERPKTRKNLGGEDFPQALAKIAVAQICESEGFQTFQQSALETLADIAV 60
           M+DGGGESGKVHERPKTRKNLG EDFP+ALAKIAVAQICESEGFQ FQQSALETLAD+AV
Sbjct: 1   MSDGGGESGKVHERPKTRKNLGSEDFPRALAKIAVAQICESEGFQIFQQSALETLADVAV 60

Query: 61  RYVQNIGKTANFCANFAGRTECNVFDIIQALEDLGSVQGFAGALDIEHCLASSSTVKEIA 120
           RYVQN+G TANFCANFAGRTECN+FDIIQALEDLGSVQGFAGA DIEHCLASSSTVKEIA
Sbjct: 61  RYVQNMGSTANFCANFAGRTECNLFDIIQALEDLGSVQGFAGASDIEHCLASSSTVKEIA 120

Query: 121 RYVAQAEEIPFAYAVPKFPVVKERKLRPTFLQIGEETPGKHIPSWLPALPDPETYIASPT 180
           RYVAQAEEIPFAY+VPKFPVVKERKLRP+FLQIGEE PG+HIPSWLPALPDPETYI SP 
Sbjct: 121 RYVAQAEEIPFAYSVPKFPVVKERKLRPSFLQIGEEPPGEHIPSWLPALPDPETYIESPI 180

Query: 181 VEEKVVEPQKIKTEPEKQCKSAEKSLWNLQQWLFCNGLEGSRREGPRNAAMTKQTQESNP 240
           V+E+VVEPQ IKTEPE QC+S+EKS  NLQQWLFCNGLEGS+RE PRNAAMTKQ QESNP
Sbjct: 181 VKEEVVEPQTIKTEPEIQCRSSEKSFRNLQQWLFCNGLEGSQREDPRNAAMTKQIQESNP 240

Query: 241 FLAPPLQFGEKEVSSVVLPDRILNNSSTEYPVPARENCLVDTHVSVLETFAPAIESLKNS 300
           FLAPPLQFGEKEVSS+VLP+++LNNSSTEY VP  ENC VDTHVSVLETFAPAIES+KN+
Sbjct: 241 FLAPPLQFGEKEVSSIVLPNKVLNNSSTEYHVPVMENCHVDTHVSVLETFAPAIESIKNN 300

Query: 301 LHDSEEKFSLNRRSTVQFKIGTGKKPESSMIELKALNNGVKNSSSWFVGDDKXXXXXXXA 360
            H SEEK+SLNR+STVQFKIGTGKK   SMIEL ALNNGVKNSSSWFVG+D+       A
Sbjct: 301 FHMSEEKYSLNRKSTVQFKIGTGKKAAGSMIELTALNNGVKNSSSWFVGEDEKDDKKRKA 360

Query: 361 EKILKNSIENSNELYQL 378
           EKILK+S+ENSNEL  L
Sbjct: 361 EKILKDSMENSNELSHL 377

[Close]
BLAST of Carg05883 vs. TAIR10
Match: AT5G15570.1 (Bromodomain transcription factor)

HSP 1 Score: 216.5 bits (550), Expect = 2.9e-56
Identity = 144/373 (38.61%), Postives = 203/373 (54.42%), Query Frame = 0 

Query: 1   MNDGGGESGKVHERPKTRKNLG-GEDFPQALAKIAVAQICES-------------EG--F 60
           M +GGGE G      + ++++  G DF  ALA++A AQICES             EG  F
Sbjct: 1   MINGGGEGGSQRRELQGKRSMSRGNDFAYALARMATAQICESVEINSYQESSQSREGLRF 60

Query: 61  QTFQQSALETLADIAVRYVQNIGKTANFCANFAGRTECNVFDIIQALEDLGSVQGFAGAL 120
            +FQ++ALETL D+ ++Y+QNIGKTA F  N AGR E N  DI+QALEDLGS  GF GA 
Sbjct: 61  SSFQETALETLTDVVIQYIQNIGKTAQFYVNMAGRVESNALDIVQALEDLGSGLGFDGAH 120

Query: 121 DIEHCLASSSTVKEIARYVAQAEEIPFAYAVPKFPVVKERKLRPTFLQIGEETPGKHIPS 180
           D+EHCLA S  VK+I RY  +AEEIPF Y++P+FP  + ++  P+F  IG E P +HIP 
Sbjct: 121 DVEHCLADSGVVKDIIRYTGEAEEIPFVYSLPRFPFNRGKRPAPSFSDIGVEPPDEHIPV 180

Query: 181 WLPALPDPETYIASPTVEEKVVEPQKIKTEPEKQCKSAEKSLWNLQQWLFCNGLEGSRRE 240
           WLPA   PET +++ + E  V      K E + Q +    SL ++QQ +  + L+  +  
Sbjct: 181 WLPAF--PETKMSNGSEEINV-----DKIERDVQSRDNGSSLMSVQQSVDVDRLKVQKSM 240

Query: 241 GPRNAAMTKQTQESNPFLAPPLQFGEKEV--SSVVLPDRILNNSSTEYPVPARENCLVDT 300
             ++     +  E NPFLA P+  GEK V  S VV P  +     +   +P  ++  +  
Sbjct: 241 DQKDVQKPIEEPEGNPFLAAPIWVGEKNVSLSRVVCPSELRKEEISTNHLP-EKHMSMSH 300

Query: 301 HVSVLETFAPAIE-SLKNSLHDSEEKFSLNRRST----VQFKIGTGKKPESSMIELKALN 351
           H+  LE +A + + + KN L   E++   +   T    ++FKIGT K  E   I      
Sbjct: 301 HIPALEAYALSDKINDKNRLAGMEDEQKRDGARTQGALLRFKIGTRKASECWKI------ 359

[Close]
BLAST of Carg05883 vs. TAIR10
Match: AT3G02160.1 (Bromodomain transcription factor)

HSP 1 Score: 214.2 bits (544), Expect = 1.4e-55
Identity = 155/383 (40.47%), Postives = 207/383 (54.05%), Query Frame = 0 

Query: 1   MNDGGGESG-KVHERPKTRKNLGGEDFPQALAKIAVAQICES------------EG--FQ 60
           MN+G GE G +  E    RK   G DF  ++A++AVAQICES            EG  F 
Sbjct: 17  MNNGVGEGGSQQRELHGKRKLFRGNDFAFSIARMAVAQICESVEVNPYQESQTREGVRFS 76

Query: 61  TFQQSALETLADIAVRYVQNIGKTANFCANFAGRTECNVFDIIQALEDLGSVQGFAGALD 120
           +FQ+SAL+TL D+AV+Y+Q+IGKTA+  AN AGR + N  DI+QALEDLGS  GFAG  D
Sbjct: 77  SFQESALDTLTDVAVQYIQSIGKTAHLYANLAGRVDGNSLDILQALEDLGSGLGFAGVSD 136

Query: 121 IEHCLASSSTVKEIARYVAQAEEIPFAYAVPKFPVVKERKLRPTFLQIGEETPGKHIPSW 180
            +HCLA S  VK+I RY  +AEEIPF Y++P+FP  KE+K  P+F ++G E P +HIP W
Sbjct: 137 TDHCLADSGVVKDIIRYTGEAEEIPFVYSLPRFPFSKEKKPAPSFSEVGAEPPDEHIPVW 196

Query: 181 LPALPDPETYIASPTVEEKVVEPQKIKTEPEKQCKSAEKSLWNLQQWLFCNGLEGSRREG 240
           LPA P+ E       + ++  E      E E   K    SL ++Q      G     +  
Sbjct: 197 LPAFPETE-------LCDRSEETNAATIEGEIPSKENGSSLPSMQLSFDGGGRLEIHKSS 256

Query: 241 PRNAAMTKQTQESNPFLAPPLQFGEKEVSSVVLPDRILNNSSTEYPVPARENCLVDTHVS 300
                 T+   E N FL  PL+F EK VS VV P  + N       VP + +   + H+ 
Sbjct: 257 KDVGESTEAVVEGNLFLTAPLRFVEKNVSPVVRPLELSNEVVRTNHVPDK-HVRNNHHIP 316

Query: 301 VLETFAPAIE-SLKNSLHDSE--EKFSLNRR--STVQFKIGTGKKPESSMIELKALNNGV 360
           +LE  AP+ + + KN L  S+  EK  + R+  + V+FKIGT K+   SM   K   N  
Sbjct: 317 ILEASAPSDKINNKNWLAISKDVEKVDVARKELTLVRFKIGTTKR---SMCLAK---NRS 376

Query: 361 KNSSSWF-VGDDKXXXXXXXAEK 363
                WF  G+DK        EK
Sbjct: 377 FQEEGWFQEGEDKREKTSEIKEK 385

[Close]
BLAST of Carg05883 vs. TAIR10
Match: AT4G34340.1 (TBP-associated factor 8)

HSP 1 Score: 183.7 bits (465), Expect = 2.1e-46
Identity = 121/356 (33.99%), Postives = 180/356 (50.56%), Query Frame = 0 

Query: 25  DFPQALAKIAVAQICESEGFQTFQQSALETLADIAVRYVQNIGKTANFCANFAGRTECNV 84
           +F  A AK AVAQ+CES G++ F+  ALE+L+  A++Y+  +GKTA   AN  GR++CNV
Sbjct: 25  EFSHAAAKAAVAQVCESVGYENFKDPALESLSGFALQYILQLGKTATSFANLTGRSQCNV 84

Query: 85  FDIIQALEDLGSVQGFAGALDIEHCLASSSTVKEIARYVAQAEEIPFAYAVPKFPVV--- 144
           FDII AL+DL    G  G       L  S  ++EI  +V  +EE+PF+  +P FPV    
Sbjct: 85  FDIILALDDLTDNNGEQGISSESCSLGRSIKLREIIDFVNSSEEVPFSQPLPSFPVAISD 144

Query: 145 KERKLRPTFLQIGEETPGKHIPSWLPALPDPETYIASPTVEEKVVEPQKIKTEPEKQCKS 204
           + RK+ P+F++IGE  PGKHIP WLPA PDP TY  +P   E+V +P+  K E  +Q + 
Sbjct: 145 RSRKMIPSFVEIGETPPGKHIPLWLPAFPDPHTYKETPMWIERVSDPRGDKIEQARQRRK 204

Query: 205 AEKSLWNLQQWLFCNGLEGSRREGPRNAAMTKQTQESNPFLAPPLQFGEKEVSSVVLPDR 264
           AE++L +LQ+ L C     +   G  +    +   +            E E+ SV   ++
Sbjct: 205 AERALLSLQRKLVCKISSRNPVWGDMDGVKEEMRDD------------ESELRSVSSGEK 264

Query: 265 ILNNSSTEYPVPARENCLVDTHVSVLETFAPAIESLKNSLHDSEEKFSLNRRSTVQFKIG 324
           +                L    +SV+E FAPA+E+ ++             +     K+ 
Sbjct: 265 V--------------ESLNRDGLSVIEAFAPAMEAARDGFSSEAHTEWKKNKPVALSKLR 324

Query: 325 TGKKPESSMIELKALNNGVKNSSSWFVGDDKXXXXXXXAEKILKNSIENSNELYQL 378
           T KK     ++L     G     S FV ++        AE IL+  +EN  +L QL
Sbjct: 325 TEKKFLGQPLDLSLQMKGEDRPIS-FVREEDRDDKRRRAEFILRQCMENPVDLNQL 353

[Close]
BLAST of Carg05883 vs. TAIR10
Match: AT1G31240.1 (Bromodomain transcription factor)

HSP 1 Score: 85.5 bits (210), Expect = 7.7e-17
Identity = 52/159 (32.70%), Postives = 85/159 (53.46%), Query Frame = 0 

Query: 25  DFPQALAKIAVAQICESEGFQTFQQSALETLADIAVRYVQNIGKTANFCANFAGRTECNV 84
           +F  +L KIAV+QIC+S G++    SAL TL     +++Q++ + A+  +N A RTE N+
Sbjct: 25  EFSFSLTKIAVSQICQSIGYKATDASALNTLTLTTTKFLQSLAELASSFSNTANRTEVNL 84

Query: 85  FDIIQALEDLG-----SVQGFAGALDIE-HCLASSSTVKEIARYVAQAEEIPFAYAVPKF 144
           FDI+  L+D+         G +   DIE  CL  S+ ++ ++ +V  A EIPFA  +P+ 
Sbjct: 85  FDIVNGLQDIALSTSDCFPGGSTVHDIESQCLIKSAVLRNLSDFVTYAPEIPFAKPLPR- 144

Query: 145 PVVKERKLRPTF------LQIGEETPGKHIPSWLPALPD 172
                R+   +F      + +        +P+WLP  PD
Sbjct: 145 -----RERDGSFGGDLDHVAVTRSVDVTSVPAWLPPFPD 177

[Close]
BLAST of Carg05883 vs. Swiss-Prot
Match: sp|Q9SYZ9|TAF8_ARATH (Transcription initiation factor TFIID subunit 8 OS=Arabidopsis thaliana OX=3702 GN=TAF8 PE=1 SV=1)

HSP 1 Score: 183.7 bits (465), Expect = 3.7e-45
Identity = 121/356 (33.99%), Postives = 180/356 (50.56%), Query Frame = 0 

Query: 25  DFPQALAKIAVAQICESEGFQTFQQSALETLADIAVRYVQNIGKTANFCANFAGRTECNV 84
           +F  A AK AVAQ+CES G++ F+  ALE+L+  A++Y+  +GKTA   AN  GR++CNV
Sbjct: 25  EFSHAAAKAAVAQVCESVGYENFKDPALESLSGFALQYILQLGKTATSFANLTGRSQCNV 84

Query: 85  FDIIQALEDLGSVQGFAGALDIEHCLASSSTVKEIARYVAQAEEIPFAYAVPKFPVV--- 144
           FDII AL+DL    G  G       L  S  ++EI  +V  +EE+PF+  +P FPV    
Sbjct: 85  FDIILALDDLTDNNGEQGISSESCSLGRSIKLREIIDFVNSSEEVPFSQPLPSFPVAISD 144

Query: 145 KERKLRPTFLQIGEETPGKHIPSWLPALPDPETYIASPTVEEKVVEPQKIKTEPEKQCKS 204
           + RK+ P+F++IGE  PGKHIP WLPA PDP TY  +P   E+V +P+  K E  +Q + 
Sbjct: 145 RSRKMIPSFVEIGETPPGKHIPLWLPAFPDPHTYKETPMWIERVSDPRGDKIEQARQRRK 204

Query: 205 AEKSLWNLQQWLFCNGLEGSRREGPRNAAMTKQTQESNPFLAPPLQFGEKEVSSVVLPDR 264
           AE++L +LQ+ L C     +   G  +    +   +            E E+ SV   ++
Sbjct: 205 AERALLSLQRKLVCKISSRNPVWGDMDGVKEEMRDD------------ESELRSVSSGEK 264

Query: 265 ILNNSSTEYPVPARENCLVDTHVSVLETFAPAIESLKNSLHDSEEKFSLNRRSTVQFKIG 324
           +                L    +SV+E FAPA+E+ ++             +     K+ 
Sbjct: 265 V--------------ESLNRDGLSVIEAFAPAMEAARDGFSSEAHTEWKKNKPVALSKLR 324

Query: 325 TGKKPESSMIELKALNNGVKNSSSWFVGDDKXXXXXXXAEKILKNSIENSNELYQL 378
           T KK     ++L     G     S FV ++        AE IL+  +EN  +L QL
Sbjct: 325 TEKKFLGQPLDLSLQMKGEDRPIS-FVREEDRDDKRRRAEFILRQCMENPVDLNQL 353

[Close]
BLAST of Carg05883 vs. Swiss-Prot
Match: sp|A7MAZ4|TAF8_BOVIN (Transcription initiation factor TFIID subunit 8 OS=Bos taurus OX=9913 GN=TAF8 PE=2 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 3.0e-10
Identity = 44/176 (25.00%), Postives = 81/176 (46.02%), Query Frame = 0 

Query: 32  KIAVAQICESEGFQTFQQSALETLADIAVRYVQNIGKTANFCANFAGRTECNVFDIIQAL 91
           ++ V+ +    GF++ +++++ETL ++   Y+  IG++A        RT+  + DI+  L
Sbjct: 38  QVVVSSLLTEAGFESAEKASVETLTEMLQSYISEIGRSAKSYCEHTARTQPTLSDIVVTL 97

Query: 92  EDLGSVQGFAGALDIEHCLASSSTVKEIARYVAQAEEIPFAYAVPKFPVVKERKLRPTFL 151
            ++G                    V  +  Y  +++ +     V   P V  + + P  L
Sbjct: 98  VEMG------------------FNVDTLPAYAKRSQRM-----VITAPPVTNQPVTPKAL 157

Query: 152 QIGEETP-GKHIPSWLPALPDPETYIASPTVEEKVVEPQKIKTEPEKQCKSAEKSL 207
             G+  P   HIPS  P  PDP TYI +PT  E V + Q ++ +   Q +  E++L
Sbjct: 158 TAGQNRPHPPHIPSHFPEFPDPHTYIKTPTYREPVSDYQVLREKAASQRRDVERAL 190

[Close]
BLAST of Carg05883 vs. Swiss-Prot
Match: sp|Q7Z7C8|TAF8_HUMAN (Transcription initiation factor TFIID subunit 8 OS=Homo sapiens OX=9606 GN=TAF8 PE=1 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 3.0e-10
Identity = 44/176 (25.00%), Postives = 81/176 (46.02%), Query Frame = 0 

Query: 32  KIAVAQICESEGFQTFQQSALETLADIAVRYVQNIGKTANFCANFAGRTECNVFDIIQAL 91
           ++ V+ +    GF++ +++++ETL ++   Y+  IG++A        RT+  + DI+  L
Sbjct: 38  QVVVSSLLTEAGFESAEKASVETLTEMLQSYISEIGRSAKSYCEHTARTQPTLSDIVVTL 97

Query: 92  EDLGSVQGFAGALDIEHCLASSSTVKEIARYVAQAEEIPFAYAVPKFPVVKERKLRPTFL 151
            ++G                    V  +  Y  +++ +     V   P V  + + P  L
Sbjct: 98  VEMG------------------FNVDTLPAYAKRSQRM-----VITAPPVTNQPVTPKAL 157

Query: 152 QIGEETP-GKHIPSWLPALPDPETYIASPTVEEKVVEPQKIKTEPEKQCKSAEKSL 207
             G+  P   HIPS  P  PDP TYI +PT  E V + Q ++ +   Q +  E++L
Sbjct: 158 TAGQNRPHPPHIPSHFPEFPDPHTYIKTPTYREPVSDYQVLREKAASQRRDVERAL 190

[Close]
BLAST of Carg05883 vs. Swiss-Prot
Match: sp|Q9EQH4|TAF8_MOUSE (Transcription initiation factor TFIID subunit 8 OS=Mus musculus OX=10090 GN=Taf8 PE=2 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 3.9e-10
Identity = 44/176 (25.00%), Postives = 81/176 (46.02%), Query Frame = 0 

Query: 32  KIAVAQICESEGFQTFQQSALETLADIAVRYVQNIGKTANFCANFAGRTECNVFDIIQAL 91
           ++ V+ +    GF++ +++++ETL ++   Y+  IG++A        RT+  + DI+  L
Sbjct: 36  QVVVSSLLTEAGFESAEKASVETLTEMLQSYISEIGRSAKSYCEHTARTQPTLSDIVVTL 95

Query: 92  EDLGSVQGFAGALDIEHCLASSSTVKEIARYVAQAEEIPFAYAVPKFPVVKERKLRPTFL 151
            ++G                    V  +  Y  +++ +     V   P V  + + P  L
Sbjct: 96  VEMG------------------FNVDTLPAYAKRSQRM-----VITAPPVTNQPVTPKAL 155

Query: 152 QIGEETP-GKHIPSWLPALPDPETYIASPTVEEKVVEPQKIKTEPEKQCKSAEKSL 207
             G+  P   HIPS  P  PDP TYI +PT  E V + Q ++ +   Q +  E++L
Sbjct: 156 TAGQNRPHPPHIPSHFPEFPDPHTYIKTPTYREPVSDYQILREKAASQRRDVERAL 188

[Close]
BLAST of Carg05883 vs. Swiss-Prot
Match: sp|Q5VWG9|TAF3_HUMAN (Transcription initiation factor TFIID subunit 3 OS=Homo sapiens OX=9606 GN=TAF3 PE=1 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 1.9e-09
Identity = 41/147 (27.89%), Postives = 74/147 (50.34%), Query Frame = 0 

Query: 24  EDFPQALAKIAVAQICESEGFQTFQQSALETLADIAVRYVQNIGKTANFCANFAGRTECN 83
           E + ++L +++VAQIC++ G+ + Q SA   L D+  RY+Q +G+  +  +   GRT+  
Sbjct: 3   ESYSRSLLRVSVAQICQALGWDSVQLSACHLLTDVLQRYLQQLGRGCHRYSELYGRTDPI 62

Query: 84  VFDIIQALEDLGSVQGFAGALDIEHCLASSSTVKEIARYVAQAEEIPFAYAVPKFPVVKE 143
           + D+ +A + +G                   ++ E+  Y+   E + F + +P FPV K 
Sbjct: 63  LDDVGEAFQLMG------------------VSLHELEDYIHNIEPVTFPHQIPSFPVSKN 122

Query: 144 RKLRPTFLQIGE---ETPGKHIPSWLP 168
             L+  F Q G    E   ++IP +LP
Sbjct: 123 NVLQ--FPQPGSKDAEERKEYIPDYLP 129

[Close]
BLAST of Carg05883 vs. TrEMBL
Match: tr|A0A0A0KSJ1|A0A0A0KSJ1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G639490 PE=4 SV=1)

HSP 1 Score: 639.8 bits (1649), Expect = 3.8e-180
Identity = 318/377 (84.35%), Postives = 345/377 (91.51%), Query Frame = 0 

Query: 1   MNDGGGESGKVHERPKTRKNLGGEDFPQALAKIAVAQICESEGFQTFQQSALETLADIAV 60
           M+DGGGESGKVHERPKTRKNLG EDFP+ALAKIAVAQICESEGFQ FQQSALETLAD+AV
Sbjct: 1   MSDGGGESGKVHERPKTRKNLGSEDFPRALAKIAVAQICESEGFQIFQQSALETLADVAV 60

Query: 61  RYVQNIGKTANFCANFAGRTECNVFDIIQALEDLGSVQGFAGALDIEHCLASSSTVKEIA 120
           RYVQN+G TANFCANFAGRTECN+FDIIQALEDLGSVQGFAGA DIEHCLASSSTVKE A
Sbjct: 61  RYVQNMGSTANFCANFAGRTECNLFDIIQALEDLGSVQGFAGASDIEHCLASSSTVKEFA 120

Query: 121 RYVAQAEEIPFAYAVPKFPVVKERKLRPTFLQIGEETPGKHIPSWLPALPDPETYIASPT 180
           RYVAQAEE+PFAY+VPKFPVVKERKLRP+FLQIGEE PG+HIPSWLPALPDPETYI SP 
Sbjct: 121 RYVAQAEEVPFAYSVPKFPVVKERKLRPSFLQIGEEPPGEHIPSWLPALPDPETYIESPI 180

Query: 181 VEEKVVEPQKIKTEPEKQCKSAEKSLWNLQQWLFCNGLEGSRREGPRNAAMTKQTQESNP 240
           V+E+VVEPQ IKTEPEKQC++ EKS WNLQQWLFCNGLEGS+RE PRNAAMTKQ QESNP
Sbjct: 181 VKEEVVEPQTIKTEPEKQCRT-EKSFWNLQQWLFCNGLEGSQREDPRNAAMTKQIQESNP 240

Query: 241 FLAPPLQFGEKEVSSVVLPDRILNNSSTEYPVPARENCLVDTHVSVLETFAPAIESLKNS 300
           FLAPPLQFGEKEVSS+VLPD++LNNSSTEY VP  ENC VDTHVSVLETFAPAIES+KN+
Sbjct: 241 FLAPPLQFGEKEVSSIVLPDKVLNNSSTEYHVPVMENCQVDTHVSVLETFAPAIESIKNN 300

Query: 301 LHDSEEKFSLNRRSTVQFKIGTGKKPESSMIELKALNNGVKNSSSWFVGDDKXXXXXXXA 360
            H SEEK+SLNR+STVQFKIGTGKK   +MIEL+ALNNGVK SSSWFVG+D+       A
Sbjct: 301 FHMSEEKYSLNRKSTVQFKIGTGKKAAGNMIELRALNNGVKKSSSWFVGEDEKDDKKRKA 360

Query: 361 EKILKNSIENSNELYQL 378
           EKILK+S+ENSNEL  L
Sbjct: 361 EKILKDSMENSNELSHL 376

[Close]
BLAST of Carg05883 vs. TrEMBL
Match: tr|A0A1S3CA13|A0A1S3CA13_CUCME (transcription initiation factor TFIID subunit 8 OS=Cucumis melo OX=3656 GN=LOC103498533 PE=4 SV=1)

HSP 1 Score: 639.4 bits (1648), Expect = 5.0e-180
Identity = 320/377 (84.88%), Postives = 345/377 (91.51%), Query Frame = 0 

Query: 1   MNDGGGESGKVHERPKTRKNLGGEDFPQALAKIAVAQICESEGFQTFQQSALETLADIAV 60
           M+DGGGESGKVHERPKTRKNLG EDFP+ALAKIAVAQICESEGFQ FQQSALETLAD+AV
Sbjct: 1   MSDGGGESGKVHERPKTRKNLGSEDFPRALAKIAVAQICESEGFQIFQQSALETLADVAV 60

Query: 61  RYVQNIGKTANFCANFAGRTECNVFDIIQALEDLGSVQGFAGALDIEHCLASSSTVKEIA 120
           RYVQN+G TANFCANFAGRTECN+FDIIQALEDLGSVQGFAGA DIEHCLASSSTVKEIA
Sbjct: 61  RYVQNMGSTANFCANFAGRTECNLFDIIQALEDLGSVQGFAGASDIEHCLASSSTVKEIA 120

Query: 121 RYVAQAEEIPFAYAVPKFPVVKERKLRPTFLQIGEETPGKHIPSWLPALPDPETYIASPT 180
           RYVAQAEEIPFAY+VPKFPVVKERKLRP+FLQIGEE PG+HIPSWLPALPDPETYI SP 
Sbjct: 121 RYVAQAEEIPFAYSVPKFPVVKERKLRPSFLQIGEEPPGEHIPSWLPALPDPETYIESPI 180

Query: 181 VEEKVVEPQKIKTEPEKQCKSAEKSLWNLQQWLFCNGLEGSRREGPRNAAMTKQTQESNP 240
           V+E+VVEPQ IKTEPE QC+S+EKS  NLQQWLFCNGLEGS+RE PRNAAMTKQ QESNP
Sbjct: 181 VKEEVVEPQTIKTEPEIQCRSSEKSFRNLQQWLFCNGLEGSQREDPRNAAMTKQIQESNP 240

Query: 241 FLAPPLQFGEKEVSSVVLPDRILNNSSTEYPVPARENCLVDTHVSVLETFAPAIESLKNS 300
           FLAPPLQFGEKEVSS+VLP+++LNNSSTEY VP  ENC VDTHVSVLETFAPAIES+KN+
Sbjct: 241 FLAPPLQFGEKEVSSIVLPNKVLNNSSTEYHVPVMENCHVDTHVSVLETFAPAIESIKNN 300

Query: 301 LHDSEEKFSLNRRSTVQFKIGTGKKPESSMIELKALNNGVKNSSSWFVGDDKXXXXXXXA 360
            H SEEK+SLNR+STVQFKIGTGKK   SMIEL ALNNGVKNSSSWFVG+D+       A
Sbjct: 301 FHMSEEKYSLNRKSTVQFKIGTGKKAAGSMIELTALNNGVKNSSSWFVGEDEKDDKKRKA 360

Query: 361 EKILKNSIENSNELYQL 378
           EKILK+S+ENSNEL  L
Sbjct: 361 EKILKDSMENSNELSHL 377

[Close]
BLAST of Carg05883 vs. TrEMBL
Match: tr|M5WU34|M5WU34_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_3G252500 PE=4 SV=1)

HSP 1 Score: 391.7 bits (1005), Expect = 1.8e-105
Identity = 209/381 (54.86%), Postives = 274/381 (71.92%), Query Frame = 0 

Query: 1   MNDGGGESGKVHER-PKTRKNLGGEDFPQALAKIAVAQICESEGFQTFQQSALETLADIA 60
           M+DGGGESG+ HE+  +T++   G+DF +A+AKIAVAQ+CE  GFQT+Q SALETL+D+A
Sbjct: 1   MSDGGGESGREHEQHNRTQRKSSGDDFARAIAKIAVAQVCEIVGFQTYQLSALETLSDVA 60

Query: 61  VRYVQNIGKTANFCANFAGRTECNVFDIIQALEDLGSVQGFAGALDIEHCLASSSTVKEI 120
           V Y+ NIGKTA+F AN +GR +CNVFDIIQ LEDLG  QGFAGA D++HCLASS TV+EI
Sbjct: 61  VHYIHNIGKTAHFYANLSGRMDCNVFDIIQGLEDLGLAQGFAGASDVDHCLASSGTVREI 120

Query: 121 ARYVAQAEEIPFAYAVPKFPVVKERKLRPTFLQIGEETPGKHIPSWLPALPDPETYIASP 180
           A+YV + E IPF+Y++P+FPVVK+RKL P+FLQ G ET G+HIP WLPA P+P TY+ SP
Sbjct: 121 AQYVGETEHIPFSYSIPQFPVVKDRKLTPSFLQSGVETLGEHIPIWLPAFPEPHTYVPSP 180

Query: 181 TVEEKVVEPQKIKTEPEKQCKSAEKSLWNLQQWLFCNGLEGSRREGPRNAAMTKQTQESN 240
              E+  E      E +K+ ++ E+SL+NLQ+ L CNGLEG   + P +A   KQ +ESN
Sbjct: 181 ISNERARELHTDMIEQKKKQRNVERSLFNLQRRLVCNGLEGPSID-PGDADKAKQARESN 240

Query: 241 PFLAPPLQFGEKEVSSVVLPDRILNNSSTEYPVPARENCLVDTHVSVLETFAPAIESLKN 300
           PFLA PLQ+GE EVS V LP ++ + ++ E  V   EN + +   SVLETFAPAIE++K+
Sbjct: 241 PFLAAPLQYGETEVSHVALPAKLSSEATVEKLV--AENRVAEKCSSVLETFAPAIEAMKS 300

Query: 301 SLHDSEEKFS---LNRRSTVQFKIGTGKKPESSMIELKALNNGVKNSSSWFVGDDKXXXX 360
           S  +S+E+     L+RR TVQFKIG  K   S+M+     N G + + SWF  +++    
Sbjct: 301 SSCESQEEHKEILLSRRPTVQFKIGIAKTSFSTMLHSSPHNKGFQKNYSWFGRENEKDEK 360

Query: 361 XXXAEKILKNSIENSNELYQL 378
              AEKILKNS+ENS EL QL
Sbjct: 361 KKRAEKILKNSMENSQELAQL 378

[Close]
BLAST of Carg05883 vs. TrEMBL
Match: tr|A0A2P4HV50|A0A2P4HV50_QUESU (Transcription initiation factor tfiid subunit 8 OS=Quercus suber OX=58331 GN=CFP56_25377 PE=4 SV=1)

HSP 1 Score: 390.2 bits (1001), Expect = 5.3e-105
Identity = 214/389 (55.01%), Postives = 269/389 (69.15%), Query Frame = 0 

Query: 1   MNDGGGESGKVHERPKTRKNLGGEDFPQALAKIAVAQICESEGFQTFQQSALETLADIAV 60
           M+DGG ES +  E+P  ++  GGE+F +A  K+AVAQICESEGFQ+FQQSALETL+D+ V
Sbjct: 1   MSDGGRESERGPEKPAPQRKPGGEEFARAFVKVAVAQICESEGFQSFQQSALETLSDVTV 60

Query: 61  RYVQNIGKTANFCANFAGRTECNVFDIIQALEDLGSVQGFAGALDIEHCLASSSTVKEIA 120
           RY+++IGKTA+  AN AGRTE NVFDIIQ LEDLG  QGF GA DIEHCLASS TV+E+A
Sbjct: 61  RYIRDIGKTAHVYANQAGRTESNVFDIIQGLEDLGLAQGFLGASDIEHCLASSGTVRELA 120

Query: 121 RYVAQAEEIPFAYAVPKFPVVKERKLRPTFLQIGEETPGKHIPSWLPALPDPETYIASPT 180
           +YV ++E+IPFAY++P+FPVVK+RKL P+FLQIGEE PG+HIP+WLPA PDP TY  S T
Sbjct: 121 QYVGESEQIPFAYSLPQFPVVKDRKLTPSFLQIGEEPPGEHIPAWLPAFPDPGTYAQSST 180

Query: 181 VEEKVVEPQKIKTEPEKQCKSAEKSLWNLQQWLFCNGLEGSRREGPRNAAMTKQT----- 240
             ++ +E +  K E E Q +  E+SL N+ QWL  N LEG       +AA  KQ      
Sbjct: 181 PNDRTIELKMAKIEQENQRRKPERSLLNVNQWLASNELEGPSSVDAGDAAKAKQAXXXXX 240

Query: 241 --QESNPFLAPPLQFGEKEVSSVVLP--DRILNNSSTEYPVPARENCLVDTHVSVLETFA 300
              ESNPFLA PLQ+GEKEVSSVVLP   ++ N+S+T  P+       +D HVSVLE FA
Sbjct: 241 XXXESNPFLAAPLQYGEKEVSSVVLPAKTKLSNDSTTGNPISKYHG--MDNHVSVLEAFA 300

Query: 301 PAIESLKNSLHDSEE---KFSLNRRSTVQFKIGTGKKPESSMIELKALNNGVKNSSSWFV 360
           P IE++K+ L DSEE   K  LN R TVQFK+G+GKK   SM++    N   +   SWF 
Sbjct: 301 PNIEAMKSGLRDSEEGHKKVLLNTRPTVQFKLGSGKKYLGSMLDSSPQNKSFEVIESWFG 360

Query: 361 GDDKXXXXXXXAEKILKNSIENSNELYQL 378
             ++       AE+ILK S+ N  EL  L
Sbjct: 361 RLNEKDDKKRRAEQILKESMGNLQELDHL 387

[Close]
BLAST of Carg05883 vs. TrEMBL
Match: tr|F6H493|F6H493_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_14s0068g00340 PE=4 SV=1)

HSP 1 Score: 389.8 bits (1000), Expect = 6.9e-105
Identity = 211/380 (55.53%), Postives = 264/380 (69.47%), Query Frame = 0 

Query: 1   MNDGGGESGKVHERPKTRKNLGGEDFPQALAKIAVAQICESEGFQTFQQSALETLADIAV 60
           M+DGGGESG+  +R   RK+    DFPQA+AKIAVAQICES GFQ FQQSALETL+++ V
Sbjct: 1   MSDGGGESGRESDRATKRKS-SDRDFPQAIAKIAVAQICESAGFQGFQQSALETLSEVVV 60

Query: 61  RYVQNIGKTANFCANFAGRTECNVFDIIQALEDLGSVQGFAGALDIEHCLASSSTVKEIA 120
           RY++ +GKTA+  AN A RTECN+FDIIQ LEDL S+QGF+GA D +HCLA S TV+EI 
Sbjct: 61  RYIRELGKTAHTYANSACRTECNIFDIIQGLEDLASLQGFSGASDSDHCLAGSGTVREIV 120

Query: 121 RYVAQAEEIPFAYAVPKFPVVKERKLRPTFLQIGEETPGKHIPSWLPALPDPETYIASPT 180
           +YV++AEEIPFA++VP FPV+++RK  P+FLQIGEE PG HIP WLPA PDP+TY+ SP 
Sbjct: 121 QYVSEAEEIPFAHSVPHFPVIRDRKQTPSFLQIGEEPPGDHIPDWLPAFPDPQTYVHSPV 180

Query: 181 VEEKVVEPQKIKTEPEKQCKSAEKSLWNLQQWLFCNGLEGSRREGPRNAAMTKQTQESNP 240
           + E+  +P     E  +Q K AE SL NLQQ L CNGLEG     P +AA  ++  E+NP
Sbjct: 181 LNERGADPCAGNIEQARQHKKAEWSLLNLQQQLACNGLEGPSMIDPGDAAKARRAAETNP 240

Query: 241 FLAPPLQFGEKEVSSVVLPDRILNNSSTEYPVPARENCLVDTHVSVLETFAPAIESLKNS 300
           FL+ PL FGEK VS V LP ++ N +  E    A EN  V  HVSVLETFAPAIE +K+ 
Sbjct: 241 FLSAPLHFGEKGVSPVFLPAKLSNEAVVEN--QAGENHAVANHVSVLETFAPAIELMKSR 300

Query: 301 LHDSEE---KFSLNRRSTVQFKIGTGKKPESSMIELKALNNGVKNSSSWFVGDDKXXXXX 360
             +SEE   K   N+R  VQFKI  GKK   + ++L   N  V+  +SWF  D++     
Sbjct: 301 SCESEEGRKKVLSNQRPAVQFKIEIGKKSTGTALDLSFQNKDVEKITSWFGKDNEKDDKK 360

Query: 361 XXAEKILKNSIENSNELYQL 378
             AEKILK S++N  EL QL
Sbjct: 361 RRAEKILKESMKNPQELAQL 377

The following BLAST results are available for this feature:
BLAST of Carg05883 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_023538136.11.2e-20697.08transcription initiation factor TFIID subunit 8-like [Cucurbita pepo subsp. pepo... [more]
XP_022921494.11.6e-20699.20transcription initiation factor TFIID subunit 8-like [Cucurbita moschata][more]
XP_022990062.15.2e-20596.82transcription initiation factor TFIID subunit 8-like [Cucurbita maxima][more]
XP_004141587.15.8e-18084.35PREDICTED: transcription initiation factor TFIID subunit 8 [Cucumis sativus] >KG... [more]
XP_008459385.17.6e-18084.88PREDICTED: transcription initiation factor TFIID subunit 8 [Cucumis melo][more]
BLAST of Carg05883 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G15570.12.9e-5638.61Bromodomain transcription factor[more]
AT3G02160.11.4e-5540.47Bromodomain transcription factor[more]
AT4G34340.12.1e-4633.99TBP-associated factor 8[more]
AT1G31240.17.7e-1732.70Bromodomain transcription factor[more]
BLAST of Carg05883 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9SYZ9|TAF8_ARATH3.7e-4533.99Transcription initiation factor TFIID subunit 8 OS=Arabidopsis thaliana OX=3702 ... [more]
sp|A7MAZ4|TAF8_BOVIN3.0e-1025.00Transcription initiation factor TFIID subunit 8 OS=Bos taurus OX=9913 GN=TAF8 PE... [more]
sp|Q7Z7C8|TAF8_HUMAN3.0e-1025.00Transcription initiation factor TFIID subunit 8 OS=Homo sapiens OX=9606 GN=TAF8 ... [more]
sp|Q9EQH4|TAF8_MOUSE3.9e-1025.00Transcription initiation factor TFIID subunit 8 OS=Mus musculus OX=10090 GN=Taf8... [more]
sp|Q5VWG9|TAF3_HUMAN1.9e-0927.89Transcription initiation factor TFIID subunit 3 OS=Homo sapiens OX=9606 GN=TAF3 ... [more]
BLAST of Carg05883 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0KSJ1|A0A0A0KSJ1_CUCSA3.8e-18084.35Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G639490 PE=4 SV=1[more]
tr|A0A1S3CA13|A0A1S3CA13_CUCME5.0e-18084.88transcription initiation factor TFIID subunit 8 OS=Cucumis melo OX=3656 GN=LOC10... [more]
tr|M5WU34|M5WU34_PRUPE1.8e-10554.86Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_3G252500 PE=4 SV=1[more]
tr|A0A2P4HV50|A0A2P4HV50_QUESU5.3e-10555.01Transcription initiation factor tfiid subunit 8 OS=Quercus suber OX=58331 GN=CFP... [more]
tr|F6H493|F6H493_VITVI6.9e-10555.53Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_14s0068g00340 PE=4 SV=... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0005669transcription factor TFIID complex
Vocabulary: Molecular Function
TermDefinition
GO:0046982protein heterodimerization activity
Vocabulary: INTERPRO
TermDefinition
IPR037818TAF8
IPR019473TFIID_su8_C
IPR009072Histone-fold
IPR006565BTP
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005669 transcription factor TFIID complex
molecular_function GO:0046982 protein heterodimerization activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg05883-RACarg05883-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006565Bromodomain associated domainSMARTSM0057617neu3coord: 24..100
e-value: 3.4E-28
score: 109.7
IPR006565Bromodomain associated domainPFAMPF07524Bromo_TPcoord: 28..95
e-value: 2.2E-21
score: 75.6
IPR009072Histone-foldGENE3DG3DSA:1.10.20.10coord: 23..125
e-value: 1.2E-20
score: 75.0
IPR009072Histone-foldSUPERFAMILYSSF47113Histone-foldcoord: 30..95
IPR019473Transcription factor TFIID, subunit 8, C-terminalPFAMPF10406TAF8_Ccoord: 161..209
e-value: 1.1E-10
score: 41.8
IPR019473Transcription factor TFIID, subunit 8, C-terminalCDDcd08049TAF8coord: 161..211
e-value: 2.51098E-12
score: 60.3643
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 228..242
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 224..245
NoneNo IPR availablePANTHERPTHR12321CPG BINDING PROTEINcoord: 1..377
IPR037818Transcription initiation factor TFIID subunit 8PANTHERPTHR12321:SF53BROMODOMAIN TRANSCRIPTION FACTORcoord: 1..377