Carg05580 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg05580
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	novel plant SNARE 13-like
Location	Cucurbita_argyrosperma_scaffold_046 : 1347743 .. 1349562 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTTGATGAGAGAGGCATTAATGAACCTACAACTGATGATAACATTCAGATGACATCATGTAAGTCTATATATACTTGTAAAATCCATAAGCTTGTAGCTAGATACTCATCTGTTCCTTTTTGGAGGAATTTCTACCAGTGGAATCTGTCGGGCTTTCTATGTTTGAATTTGGTATCTTTGTTTTAAAGCTCCTTGTGGAAAAATATTACCAATCTCAAGTTGAAATACCACGGAAGGATCTCCAACCACAGTAAATAAGAACTTCGTTTCCATCTGTTCTGTTCTTATAGGTCTGAATGCTCTATTGCTTTGCTTTTATTGATTATATGGTTCCATTCTCCAGTTTTATGAAATTCTACATTCTTTCATCAGCTCGTCTTTTTCTCTTTCATTTTTTAACTTCAAATAATTAATTAGTTGTTTCCCGTTCAACCCATTCATGTGATCTGTTCACAATGACTGCATTTTTTACAATTATATTTCTTCAGTTTTGATATGTCTTGCTTGACATAAATCTTATAATATAAGAAACTTGACTTGTAGAGATTAGAATTTTGTTACCAATTTTACATTAACTAGATTTAAGGATAGGTCTGCGTTGAAATCCCAGCGTTGAGGACCCAACAATTGAAATTTAAGTCAAAAGAACAGTGGCTTTGGTTCCAAAATTCAATCTTCCAGATGCATTCAAATAAATCTGGTTTAATTTGGAGTGGTAAATTTCTATATTGCTGAATTATAGGAAGCAGAAGGAAGAAAAAAATGATCATACGTGCGGGAACTATGATTTCTTTGAGTTTGTTGTTGTACATGTGAGTGTTTAGAAGTGGTAGAAAGGTTGTAAATGGAGGTTTAAAGGTGTGGACATAACTTTTAAGTACCCTCTTTTTTTCTATATATTTCACATTCTATTGGTATGTTTTTGTGCTGCAGCAATAACAAGTCAAGAACTCACCAATGTTGGGAAGAAGACAATGGATGATACTGATCCGGCAATTGAAAGCTCTAAAATGGTGACCAGTTTTTTAAAATGCACATGCCCTTTCATTTTGTTTGTCTTTGTATTTTGTTCTTTTTATAACTATTTTTCCTAATGTGAAGTTTGATGTTTAGGTAGTCGAACAAACAGTTGAAGTGGGAAGGCAATCTTCTTCTACATGGGATGGCCAAGTAAGTATATAAACTGACCATTTGAAATCATCCATTTCTTAGAAAAAGAAGTATACCTTTGGTTTAGCCCTATTAACTAGAAGCCTTTTAGTGTGTCTATGATGGTTATTGTTCTCGCCATGCAAGTTATCAAGTTTTAGTATTGTAAAATCATCAAGTTTTAGTATTGTAAAATCATCAAGTTTTAGAATTGTAAAATCAAACGTTCATTGAGAAAAAAAAAAGTGGATGGATGTGGAGCTGCATGGGAAACGTGAGATGCTGTATTTTGGTTAACGAAAACTTTGAGGTAGGATCTTAGTGTTGATAGGCTTTAAATAAGGTGATCTCCCATCTCCTTTTCTCTTCCTTCTAGTTGTAGATATTCTTAGTAGAATTGTCTTTAGGGTGGGATAGGGGCTTATGGAAGCTTTTAGGATGGGAAGGGATAGAGTCCATTTGTGACCTCTCTAGTTTGTTAACGACACTGTTCTTTGCTTTTGTCAAGAAGAGTCTTTTCTTAATGTTAACAGCCTTTGTTCTTCTTTGAGTCTAATCCTGGTCTTAAGATTAGTCGAGAAAAGAGCTCAGTTATTGATATTAATTGTGATTCATCTAAGGCTTCCAGATGGACCATGTTGGTTGGTTGTAATGTAGGGATGGCCTAA

mRNA sequence

ATGTTTGATGAGAGAGGCATTAATGAACCTACAACTGATGATAACATTCAGATGACATCATCAATAACAAGTCAAGAACTCACCAATGTTGGGAAGAAGACAATGGATGATACTGATCCGGCAATTGAAAGCTCTAAAATGGTAGTCGAACAAACAGTTGAAGTGGGAAGGCAATCTTCTTCTACATGGGATGGCCAACCTTTGTTCTTCTTTGAGTCTAATCCTGGTCTTAAGATTAGTCGAGAAAAGAGCTCAGTTATTGATATTAATTGTGATTCATCTAAGGCTTCCAGATGGACCATGTTGGTTGGTTGTAATGTAGGGATGGCCTAA

Coding sequence (CDS)

ATGTTTGATGAGAGAGGCATTAATGAACCTACAACTGATGATAACATTCAGATGACATCATCAATAACAAGTCAAGAACTCACCAATGTTGGGAAGAAGACAATGGATGATACTGATCCGGCAATTGAAAGCTCTAAAATGGTAGTCGAACAAACAGTTGAAGTGGGAAGGCAATCTTCTTCTACATGGGATGGCCAACCTTTGTTCTTCTTTGAGTCTAATCCTGGTCTTAAGATTAGTCGAGAAAAGAGCTCAGTTATTGATATTAATTGTGATTCATCTAAGGCTTCCAGATGGACCATGTTGGTTGGTTGTAATGTAGGGATGGCCTAA

Protein sequence

MFDERGINEPTTDDNIQMTSSITSQELTNVGKKTMDDTDPAIESSKMVVEQTVEVGRQSSSTWDGQPLFFFESNPGLKISREKSSVIDINCDSSKASRWTMLVGCNVGMA

Homology

[Close]

BLAST of Carg05580 vs. NCBI nr
Match: XP_022959325.1 (uncharacterized protein LOC111460335 isoform X1 [Cucurbita moschata] >XP_022959326.1 uncharacterized protein LOC111460335 isoform X1 [Cucurbita moschata])

HSP 1 Score: 130.2 bits (326), Expect = 4.4e-27
Identity = 66/66 (100.00%), Postives = 66/66 (100.00%), Query Frame = 0


Query: 1   MFDERGINEPTTDDNIQMTSSITSQELTNVGKKTMDDTDPAIESSKMVVEQTVEVGRQSS 60
           MFDERGINEPTTDDNIQMTSSITSQELTNVGKKTMDDTDPAIESSKMVVEQTVEVGRQSS
Sbjct: 38  MFDERGINEPTTDDNIQMTSSITSQELTNVGKKTMDDTDPAIESSKMVVEQTVEVGRQSS 97

Query: 61  STWDGQ 67
           STWDGQ
Sbjct: 98  STWDGQ 103

[Close]

BLAST of Carg05580 vs. NCBI nr
Match: XP_022959328.1 (uncharacterized protein LOC111460335 isoform X3 [Cucurbita moschata])

HSP 1 Score: 130.2 bits (326), Expect = 4.4e-27
Identity = 66/66 (100.00%), Postives = 66/66 (100.00%), Query Frame = 0


Query: 1  MFDERGINEPTTDDNIQMTSSITSQELTNVGKKTMDDTDPAIESSKMVVEQTVEVGRQSS 60
          MFDERGINEPTTDDNIQMTSSITSQELTNVGKKTMDDTDPAIESSKMVVEQTVEVGRQSS
Sbjct: 24 MFDERGINEPTTDDNIQMTSSITSQELTNVGKKTMDDTDPAIESSKMVVEQTVEVGRQSS 83

Query: 61 STWDGQ 67
          STWDGQ
Sbjct: 84 STWDGQ 89

[Close]

BLAST of Carg05580 vs. NCBI nr
Match: XP_022959327.1 (uncharacterized protein LOC111460335 isoform X2 [Cucurbita moschata])

HSP 1 Score: 130.2 bits (326), Expect = 4.4e-27
Identity = 66/66 (100.00%), Postives = 66/66 (100.00%), Query Frame = 0


Query: 1  MFDERGINEPTTDDNIQMTSSITSQELTNVGKKTMDDTDPAIESSKMVVEQTVEVGRQSS 60
          MFDERGINEPTTDDNIQMTSSITSQELTNVGKKTMDDTDPAIESSKMVVEQTVEVGRQSS
Sbjct: 25 MFDERGINEPTTDDNIQMTSSITSQELTNVGKKTMDDTDPAIESSKMVVEQTVEVGRQSS 84

Query: 61 STWDGQ 67
          STWDGQ
Sbjct: 85 STWDGQ 90

[Close]

BLAST of Carg05580 vs. NCBI nr
Match: XP_023006500.1 (uncharacterized protein LOC111499213 isoform X3 [Cucurbita maxima])

HSP 1 Score: 129.8 bits (325), Expect = 5.7e-27
Identity = 65/66 (98.48%), Postives = 66/66 (100.00%), Query Frame = 0


Query: 1  MFDERGINEPTTDDNIQMTSSITSQELTNVGKKTMDDTDPAIESSKMVVEQTVEVGRQSS 60
          MFDERGINEPTTDDNIQMTSSITSQELTN+GKKTMDDTDPAIESSKMVVEQTVEVGRQSS
Sbjct: 24 MFDERGINEPTTDDNIQMTSSITSQELTNIGKKTMDDTDPAIESSKMVVEQTVEVGRQSS 83

Query: 61 STWDGQ 67
          STWDGQ
Sbjct: 84 STWDGQ 89

[Close]

BLAST of Carg05580 vs. NCBI nr
Match: XP_023006497.1 (uncharacterized protein LOC111499213 isoform X1 [Cucurbita maxima] >XP_023006498.1 uncharacterized protein LOC111499213 isoform X1 [Cucurbita maxima])

HSP 1 Score: 129.8 bits (325), Expect = 5.7e-27
Identity = 65/66 (98.48%), Postives = 66/66 (100.00%), Query Frame = 0


Query: 1   MFDERGINEPTTDDNIQMTSSITSQELTNVGKKTMDDTDPAIESSKMVVEQTVEVGRQSS 60
           MFDERGINEPTTDDNIQMTSSITSQELTN+GKKTMDDTDPAIESSKMVVEQTVEVGRQSS
Sbjct: 38  MFDERGINEPTTDDNIQMTSSITSQELTNIGKKTMDDTDPAIESSKMVVEQTVEVGRQSS 97

Query: 61  STWDGQ 67
           STWDGQ
Sbjct: 98  STWDGQ 103

[Close]

BLAST of Carg05580 vs. TAIR10
Match: AT3G17440.1 (novel plant snare 13)

HSP 1 Score: 65.9 bits (159), Expect = 1.8e-11
Identity = 32/58 (55.17%), Postives = 45/58 (77.59%), Query Frame = 0


Query: 9   EPTTDDNIQMTSSITSQELTNVGKKTMDDTDPAIESSKMVVEQTVEVGRQSSSTWDGQ 67
           EPT ++N+Q+ SS+++QEL + G K MD+TD AIE SK VVEQT+EVG Q+++   GQ
Sbjct: 123 EPTAEENVQVASSMSNQELVDAGMKRMDETDQAIERSKQVVEQTLEVGTQTAANLKGQ 180

[Close]

BLAST of Carg05580 vs. TAIR10
Match: AT1G48240.1 (novel plant snare 12)

HSP 1 Score: 65.5 bits (158), Expect = 2.4e-11
Identity = 32/58 (55.17%), Postives = 44/58 (75.86%), Query Frame = 0


Query: 9   EPTTDDNIQMTSSITSQELTNVGKKTMDDTDPAIESSKMVVEQTVEVGRQSSSTWDGQ 67
           EPT ++N+QM S++++QEL + G K MD+TD AIE SK VV QT+EVG Q++S   GQ
Sbjct: 123 EPTAEENVQMASTMSNQELVDAGMKRMDETDQAIERSKQVVHQTLEVGTQTASNLKGQ 180

[Close]

BLAST of Carg05580 vs. TAIR10
Match: AT2G35190.1 (novel plant snare 11)

HSP 1 Score: 48.9 bits (115), Expect = 2.3e-06
Identity = 33/107 (30.84%), Postives = 56/107 (52.34%), Query Frame = 0


Query: 1   MFDERGINEPTTDDNIQMTSSITSQELTNVGKKTMDDTDPAIESSKMVVEQTVEVGRQSS 60
           +FD  G  E   ++N+ + S++++QEL + G   MDDTD AIE  K +V++T+ VG  +S
Sbjct: 115 LFD--GPGEEHMEENVLLASNMSNQELMDKGNSMMDDTDQAIERGKKIVQETINVGTDTS 174

Query: 61  STWDGQPLFFFESNPGLKISREKSSVIDINCDSSKASRWTMLVGCNV 108
           +    Q           ++SR  + +  I+    KAS+    +G  V
Sbjct: 175 AALKAQT---------EQMSRVVNELDSIHFSLKKASKLVKEIGRQV 210

[Close]

BLAST of Carg05580 vs. Swiss-Prot
Match: sp|Q9LRP1|NPS13_ARATH (Novel plant SNARE 13 OS=Arabidopsis thaliana OX=3702 GN=NPSN13 PE=1 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 3.3e-10
Identity = 32/58 (55.17%), Postives = 45/58 (77.59%), Query Frame = 0


Query: 9   EPTTDDNIQMTSSITSQELTNVGKKTMDDTDPAIESSKMVVEQTVEVGRQSSSTWDGQ 67
           EPT ++N+Q+ SS+++QEL + G K MD+TD AIE SK VVEQT+EVG Q+++   GQ
Sbjct: 123 EPTAEENVQVASSMSNQELVDAGMKRMDETDQAIERSKQVVEQTLEVGTQTAANLKGQ 180

[Close]

BLAST of Carg05580 vs. Swiss-Prot
Match: sp|Q9LNH6|NPS12_ARATH (Novel plant SNARE 12 OS=Arabidopsis thaliana OX=3702 GN=NPSN12 PE=2 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 4.3e-10
Identity = 32/58 (55.17%), Postives = 44/58 (75.86%), Query Frame = 0


Query: 9   EPTTDDNIQMTSSITSQELTNVGKKTMDDTDPAIESSKMVVEQTVEVGRQSSSTWDGQ 67
           EPT ++N+QM S++++QEL + G K MD+TD AIE SK VV QT+EVG Q++S   GQ
Sbjct: 123 EPTAEENVQMASTMSNQELVDAGMKRMDETDQAIERSKQVVHQTLEVGTQTASNLKGQ 180

[Close]

BLAST of Carg05580 vs. Swiss-Prot
Match: sp|Q944A9|NPS11_ARATH (Novel plant SNARE 11 OS=Arabidopsis thaliana OX=3702 GN=NPSN11 PE=1 SV=2)

HSP 1 Score: 48.9 bits (115), Expect = 4.2e-05
Identity = 33/107 (30.84%), Postives = 56/107 (52.34%), Query Frame = 0


Query: 1   MFDERGINEPTTDDNIQMTSSITSQELTNVGKKTMDDTDPAIESSKMVVEQTVEVGRQSS 60
           +FD  G  E   ++N+ + S++++QEL + G   MDDTD AIE  K +V++T+ VG  +S
Sbjct: 115 LFD--GPGEEHMEENVLLASNMSNQELMDKGNSMMDDTDQAIERGKKIVQETINVGTDTS 174

Query: 61  STWDGQPLFFFESNPGLKISREKSSVIDINCDSSKASRWTMLVGCNV 108
           +    Q           ++SR  + +  I+    KAS+    +G  V
Sbjct: 175 AALKAQT---------EQMSRVVNELDSIHFSLKKASKLVKEIGRQV 210

[Close]

BLAST of Carg05580 vs. TrEMBL
Match: tr|A0A1S3C8R6|A0A1S3C8R6_CUCME (uncharacterized protein LOC103497748 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103497748 PE=4 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 2.6e-20
Identity = 53/66 (80.30%), Postives = 61/66 (92.42%), Query Frame = 0


Query: 1   MFDERGINEPTTDDNIQMTSSITSQELTNVGKKTMDDTDPAIESSKMVVEQTVEVGRQSS 60
           +FDERGINE TTDDN+QMTSSITSQEL NVGKK MDD+DPAI+SSKMVVEQT+E+GRQS+
Sbjct: 38  LFDERGINESTTDDNVQMTSSITSQELNNVGKKIMDDSDPAIDSSKMVVEQTIEMGRQSA 97

Query: 61  STWDGQ 67
            T +GQ
Sbjct: 98  FTLEGQ 103

[Close]

BLAST of Carg05580 vs. TrEMBL
Match: tr|A0A1S3C712|A0A1S3C712_CUCME (uncharacterized protein LOC103497748 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103497748 PE=4 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 9.9e-20
Identity = 52/65 (80.00%), Postives = 60/65 (92.31%), Query Frame = 0


Query: 1   MFDERGINEPTTDDNIQMTSSITSQELTNVGKKTMDDTDPAIESSKMVVEQTVEVGRQSS 60
           +FDERGINE TTDDN+QMTSSITSQEL NVGKK MDD+DPAI+SSKMVVEQT+E+GRQS+
Sbjct: 38  LFDERGINESTTDDNVQMTSSITSQELNNVGKKIMDDSDPAIDSSKMVVEQTIEMGRQSA 97

Query: 61  STWDG 66
            T +G
Sbjct: 98  FTLEG 102

[Close]

BLAST of Carg05580 vs. TrEMBL
Match: tr|A0A0A0KCW9|A0A0A0KCW9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G001720 PE=4 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 6.4e-19
Identity = 51/66 (77.27%), Postives = 59/66 (89.39%), Query Frame = 0


Query: 1   MFDERGINEPTTDDNIQMTSSITSQELTNVGKKTMDDTDPAIESSKMVVEQTVEVGRQSS 60
           +FDERGINE +TDDN+QMT SI SQEL NVGKK MDD+DPAIESSKMVVEQT+E+GRQS+
Sbjct: 38  LFDERGINESSTDDNVQMTPSIISQELNNVGKKIMDDSDPAIESSKMVVEQTIEMGRQSA 97

Query: 61  STWDGQ 67
            T +GQ
Sbjct: 98  FTLEGQ 103

[Close]

BLAST of Carg05580 vs. TrEMBL
Match: tr|A0A1S3C8S1|A0A1S3C8S1_CUCME (novel plant SNARE 13 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103497752 PE=4 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 1.5e-12
Identity = 38/66 (57.58%), Postives = 54/66 (81.82%), Query Frame = 0


Query: 1   MFDERGINEPTTDDNIQMTSSITSQELTNVGKKTMDDTDPAIESSKMVVEQTVEVGRQSS 60
           +FDE G++EPT DDN++M SS+T+QEL + GKKTMD+TD AI+ ++ VVEQT+EVG Q++
Sbjct: 113 LFDEGGVSEPTADDNVRMASSMTNQELIDAGKKTMDETDQAIQRTQKVVEQTIEVGTQTA 172

Query: 61  STWDGQ 67
           +   GQ
Sbjct: 173 AQLKGQ 178

[Close]

BLAST of Carg05580 vs. TrEMBL
Match: tr|A0A1S3C842|A0A1S3C842_CUCME (novel plant SNARE 13 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103497752 PE=4 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 1.5e-12
Identity = 38/66 (57.58%), Postives = 54/66 (81.82%), Query Frame = 0


Query: 1   MFDERGINEPTTDDNIQMTSSITSQELTNVGKKTMDDTDPAIESSKMVVEQTVEVGRQSS 60
           +FDE G++EPT DDN++M SS+T+QEL + GKKTMD+TD AI+ ++ VVEQT+EVG Q++
Sbjct: 113 LFDEGGVSEPTADDNVRMASSMTNQELIDAGKKTMDETDQAIQRTQKVVEQTIEVGTQTA 172

Query: 61  STWDGQ 67
           +   GQ
Sbjct: 173 AQLKGQ 178

The following BLAST results are available for this feature:

BLAST of Carg05580 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022959325.1	4.4e-27	100.00	uncharacterized protein LOC111460335 isoform X1 [Cucurbita moschata] >XP_0229593...	[more]
XP_022959328.1	4.4e-27	100.00	uncharacterized protein LOC111460335 isoform X3 [Cucurbita moschata]	[more]
XP_022959327.1	4.4e-27	100.00	uncharacterized protein LOC111460335 isoform X2 [Cucurbita moschata]	[more]
XP_023006500.1	5.7e-27	98.48	uncharacterized protein LOC111499213 isoform X3 [Cucurbita maxima]	[more]
XP_023006497.1	5.7e-27	98.48	uncharacterized protein LOC111499213 isoform X1 [Cucurbita maxima] >XP_023006498...	[more]

BLAST of Carg05580 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G17440.1	1.8e-11	55.17	novel plant snare 13	[more]
AT1G48240.1	2.4e-11	55.17	novel plant snare 12	[more]
AT2G35190.1	2.3e-06	30.84	novel plant snare 11	[more]

BLAST of Carg05580 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9LRP1\|NPS13_ARATH	3.3e-10	55.17	Novel plant SNARE 13 OS=Arabidopsis thaliana OX=3702 GN=NPSN13 PE=1 SV=1	[more]
sp\|Q9LNH6\|NPS12_ARATH	4.3e-10	55.17	Novel plant SNARE 12 OS=Arabidopsis thaliana OX=3702 GN=NPSN12 PE=2 SV=1	[more]
sp\|Q944A9\|NPS11_ARATH	4.2e-05	30.84	Novel plant SNARE 11 OS=Arabidopsis thaliana OX=3702 GN=NPSN11 PE=1 SV=2	[more]

BLAST of Carg05580 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3C8R6\|A0A1S3C8R6_CUCME	2.6e-20	80.30	uncharacterized protein LOC103497748 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
tr\|A0A1S3C712\|A0A1S3C712_CUCME	9.9e-20	80.00	uncharacterized protein LOC103497748 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
tr\|A0A0A0KCW9\|A0A0A0KCW9_CUCSA	6.4e-19	77.27	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G001720 PE=4 SV=1	[more]
tr\|A0A1S3C8S1\|A0A1S3C8S1_CUCME	1.5e-12	57.58	novel plant SNARE 13 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103497752 PE=4 SV=...	[more]
tr\|A0A1S3C842\|A0A1S3C842_CUCME	1.5e-12	57.58	novel plant SNARE 13 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103497752 PE=4 SV=...	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg05580-RA	Carg05580-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR21230	VESICLE TRANSPORT V-SNARE PROTEIN VTI1-RELATED	coord: 3..65
None	No IPR available	PANTHER	PTHR21230:SF35	SUBFAMILY NOT NAMED	coord: 3..65

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg05580	Csa6G001720	Cucumber (Chinese Long) v2	carcuB0073
Carg05580	MELO3C021229	Melon (DHL92) v3.5.1	carmeB0067
Carg05580	CSPI06G00200	Wild cucumber (PI 183967)	carcpiB0077
Carg05580	Cucsa.135330	Cucumber (Gy14) v1	carcgyB0077
Carg05580	CmaCh17G004010	Cucurbita maxima (Rimu)	carcmaB0091
Carg05580	CmoCh17G003900	Cucurbita moschata (Rifu)	carcmoB0097
Carg05580	CsGy6G000240	Cucumber (Gy14) v2	carcgybB0074
Carg05580	CsaV3_6G000250	Cucumber (Chinese Long) v3	carcucB0081

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg05580	Cucurbita pepo (Zucchini)	carcpeB0099
Carg05580	Bottle gourd (USVL1VR-Ls)	carlsiB061
Carg05580	Melon (DHL92) v3.6.1	carmedB0068
Carg05580	Watermelon (Charleston Gray)	carwcgB0073
Carg05580	Watermelon (97103) v1	carwmB0073
Carg05580	Watermelon (97103) v2	carwmbB0070
Carg05580	Wax gourd	carwgoB0080