Carg05247 (gene) Silver-seed gourd

Overview
NameCarg05247
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionCASP-like protein
LocationCucurbita_argyrosperma_scaffold_010 : 697784 .. 700038 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GGTGCGGCAGCGTAGCAATTAAATCCCCTTTCCGATCTTTCATTTTCCGGGAATCCATTTTCTTTTCCATCCAAACAAAATCGAACAAACGCAACAAACCCTATTCCATTCTCCAGATTTCGAGGTCTCCAGAGCCAAATTCAAAGTTCCCCCCATTTCCGAGCGATGAATCTATGATGGAGGCGAGTGGTTTCGGCGTAGAAAAGTTGCAGAGGGAAAATGGAAGAGCTGCCGGGGGCATTGGGCACAAGCCCAAGCTTGGTCCTCCGTTTGGGGCAGGCGATTTTTGCCTCGGCTTCCCTCTTCTTCATGTGTCTCGAAATCGAGTTCTACAGCTACACGGCTTTCTGGTAATCATATTCTTTTAACCCCTGTTTTCTTCAGTTCCTTACTTCTCCAATTAGGTTTTTTTTGTCCTGGTTTTCTGATCATGGTTGGATTAATACATCATGTTTTGTAAGTAGCAACTTGTGTTAGTTTCGTGGCCTAAGTTCAATTCCAATCCATGCATTTTGTATATTAGTATATCAAATGTTTGATTACTGCCTATAGGAATTGATTAAGAACCACCTAACTTTAACAGGATATGTTCTATAGGTACTACTGTGTTCTTGAGTTCATTAGGAATTGATTAATGGATTGTAGAAAAACTGTGTTCTTTCGAAAAGTTGTAAGTTTAGATAATTTTGATGAAGCCATGGTAACCACCCATTTAAGGAAAGGAATGGTATAGGAGCTTCTTTGTACCGAATGAGTTGTTTAATAGGATTAGTCAAAGGGCATGTAAAAATTTGATTGTTAATGCCAACCCGAGCATACACGCTCCCACGTTCGCTTCTTTGCCCATTTTTATCGAAGAAAGTGGAAGTTAGAGGTTGAATTTTGTTTGAAGTTAAGGTTCATGAACTATCCACTAATCCAATGGCCTGTTAACTTGAAGTTGAAAGTGATTTTTAGTAAAAATCAGACTTAAAATTTTGTAACATTTGTCATCGTTTTTTTTATGTAATTTCTACCATGGCAAGGTGGAAATCAAAGCATCATCCTTCGGGGTTGTAAAAGGTACTTCATCTATTAAACTATGCTCGGATTGAAACATTTCTTTCGGTTGTTATTTTTAGGATGATGAATCGTATTTAAGCAAGAACTAGCTGATCTGAGTTGTGCTATTATACTAGAGGAATCATTTCGAACTAGTTTACAAATTACAGAGTGGAAGCCTAAAATGACTATGTTTCTTGGGAATTCAAATGTTTGGTAGCTCTGGATGTCTAGTTTTGGAACTGTTTATACGATGAACTTTCTATTTTCTAAACAAAAAGTTGTCTGATCACACCAAGTTTTCTAGTACAGAGTGATTAGCATTGTCCAGTATTTTAGTAATCAGTTGTAAGGTGAAAAATTCTTATCAAAATAATGTAAGGGCACATAGGAAGAACTAGAAGGATACTTGTTTGATGTTCTTCTCCAAAACATTGGGCCATTTGTTTTTTTGTTGGCATGCTTATGTTCTAGCTGCAGCTATTTCGACACAAGGATAACGACATCGAGTTTAATATGTTTGGAGTCAGACTGATGATGTTAACGATGAAGATTTCTGTTATTTCGACATCGAGTTTAATGATCTTAGAACAACTTCTGATAGATGTTCTTCCAGGAGGGCTTAAATTATGAGAATTTGAGCTAATTTTCTGTTCTTTTTCCTGCAAAAGATATGAAGATCCAAAATCTCAAGAAAACTTTATGATTGCTCATGTTAATTCCCCCAGCTATCTAGTGACAATCATGGGCTTGATGGTTCCTTGGAGTTTGACATTGGCAGTGGTGGACGGATATTCGGTTTTTGTTAGGCATTTACCTCCTCAGGCGAGAGTAACGGCGATCATCGTCGCCGGAGACTGGGTACGAAAGAAATACCCTCTAGGAAATGATCATATTAACATATTTGTGTCTTTGCAGCCCAGGTTGAAAAATGAATGAAAACAATTTACATTTGCTGTGTAATATAGGTTCTATCATTTCTCGCCTTGGCCGCTTCCTGCTCGACAGCCAGTGTCGCCGACGTGTTGCTCAAAGTCGGGGTGCCGTATTGTTCGGCAAAGCTTTGCAGTAGATATAGACTTTCAGCAGCAATGGCTTTCTTGTCATGGTTTCTTTCTCTGGTTTCTGCCCTCTTCAATCTCTGGCTTCTTCCTTCTTTGTAAAGTTGATCATTATGTTCATGTCGTTTCTGGAAAACTGTACATGTCAAAAAA

mRNA sequence

GGTGCGGCAGCGTAGCAATTAAATCCCCTTTCCGATCTTTCATTTTCCGGGAATCCATTTTCTTTTCCATCCAAACAAAATCGAACAAACGCAACAAACCCTATTCCATTCTCCAGATTTCGAGGTCTCCAGAGCCAAATTCAAAGTTCCCCCCATTTCCGAGCGATGAATCTATGATGGAGGCGAGTGGTTTCGGCGTAGAAAAGTTGCAGAGGGAAAATGGAAGAGCTGCCGGGGGCATTGGGCACAAGCCCAAGCTTGGTCCTCCGTTTGGGGCAGGCGATTTTTGCCTCGGCTTCCCTCTTCTTCATGTGTCTCGAAATCGAGTTCTACAGCTACACGGCTTTCTGCTGCAGCTATTTCGACACAAGGATAACGACATCGAGTTTAATATATATGAAGATCCAAAATCTCAAGAAAACTTTATGATTGCTCATGTTAATTCCCCCAGCTATCTAGTGACAATCATGGGCTTGATGGTTCCTTGGAGTTTGACATTGGCAGTGGTGGACGGATATTCGGTTTTTGTTAGGCATTTACCTCCTCAGGCGAGAGTAACGGCGATCATCGTCGCCGGAGACTGGGTTCTATCATTTCTCGCCTTGGCCGCTTCCTGCTCGACAGCCAGTGTCGCCGACGTGTTGCTCAAAGTCGGGGTGCCGTATTGTTCGGCAAAGCTTTGCAGTAGATATAGACTTTCAGCAGCAATGGCTTTCTTGTCATGGTTTCTTTCTCTGGTTTCTGCCCTCTTCAATCTCTGGCTTCTTCCTTCTTTGTAAAGTTGATCATTATGTTCATGTCGTTTCTGGAAAACTGTACATGTCAAAAAA

Coding sequence (CDS)

ATGATGGAGGCGAGTGGTTTCGGCGTAGAAAAGTTGCAGAGGGAAAATGGAAGAGCTGCCGGGGGCATTGGGCACAAGCCCAAGCTTGGTCCTCCGTTTGGGGCAGGCGATTTTTGCCTCGGCTTCCCTCTTCTTCATGTGTCTCGAAATCGAGTTCTACAGCTACACGGCTTTCTGCTGCAGCTATTTCGACACAAGGATAACGACATCGAGTTTAATATATATGAAGATCCAAAATCTCAAGAAAACTTTATGATTGCTCATGTTAATTCCCCCAGCTATCTAGTGACAATCATGGGCTTGATGGTTCCTTGGAGTTTGACATTGGCAGTGGTGGACGGATATTCGGTTTTTGTTAGGCATTTACCTCCTCAGGCGAGAGTAACGGCGATCATCGTCGCCGGAGACTGGGTTCTATCATTTCTCGCCTTGGCCGCTTCCTGCTCGACAGCCAGTGTCGCCGACGTGTTGCTCAAAGTCGGGGTGCCGTATTGTTCGGCAAAGCTTTGCAGTAGATATAGACTTTCAGCAGCAATGGCTTTCTTGTCATGGTTTCTTTCTCTGGTTTCTGCCCTCTTCAATCTCTGGCTTCTTCCTTCTTTGTAA

Protein sequence

MMEASGFGVEKLQRENGRAAGGIGHKPKLGPPFGAGDFCLGFPLLHVSRNRVLQLHGFLLQLFRHKDNDIEFNIYEDPKSQENFMIAHVNSPSYLVTIMGLMVPWSLTLAVVDGYSVFVRHLPPQARVTAIIVAGDWVLSFLALAASCSTASVADVLLKVGVPYCSAKLCSRYRLSAAMAFLSWFLSLVSALFNLWLLPSL
Homology
[Close]
BLAST of Carg05247 vs. NCBI nr
Match: XP_022962700.1 (CASP-like protein ARALYDRAFT_485429 [Cucurbita moschata] >XP_023517373.1 CASP-like protein ARALYDRAFT_485429 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 205.3 bits (521), Expect = 1.9e-49
Identity = 108/108 (100.00%), Postives = 108/108 (100.00%), Query Frame = 0 

Query: 94  YLVTIMGLMVPWSLTLAVVDGYSVFVRHLPPQARVTAIIVAGDWVLSFLALAASCSTASV 153
           YLVTIMGLMVPWSLTLAVVDGYSVFVRHLPPQARVTAIIVAGDWVLSFLALAASCSTASV
Sbjct: 45  YLVTIMGLMVPWSLTLAVVDGYSVFVRHLPPQARVTAIIVAGDWVLSFLALAASCSTASV 104

Query: 154 ADVLLKVGVPYCSAKLCSRYRLSAAMAFLSWFLSLVSALFNLWLLPSL 202
           ADVLLKVGVPYCSAKLCSRYRLSAAMAFLSWFLSLVSALFNLWLLPSL
Sbjct: 105 ADVLLKVGVPYCSAKLCSRYRLSAAMAFLSWFLSLVSALFNLWLLPSL 152

[Close]
BLAST of Carg05247 vs. NCBI nr
Match: XP_023003597.1 (CASP-like protein ARALYDRAFT_485429 [Cucurbita maxima])

HSP 1 Score: 204.9 bits (520), Expect = 2.5e-49
Identity = 107/108 (99.07%), Postives = 108/108 (100.00%), Query Frame = 0 

Query: 94  YLVTIMGLMVPWSLTLAVVDGYSVFVRHLPPQARVTAIIVAGDWVLSFLALAASCSTASV 153
           YLVTIMGLMVPWSLTLAVVDGYSVFVRHLPPQARVTAIIVAGDWVLSFLALAASCSTASV
Sbjct: 45  YLVTIMGLMVPWSLTLAVVDGYSVFVRHLPPQARVTAIIVAGDWVLSFLALAASCSTASV 104

Query: 154 ADVLLKVGVPYCSAKLCSRYRLSAAMAFLSWFLSLVSALFNLWLLPSL 202
           AD+LLKVGVPYCSAKLCSRYRLSAAMAFLSWFLSLVSALFNLWLLPSL
Sbjct: 105 ADILLKVGVPYCSAKLCSRYRLSAAMAFLSWFLSLVSALFNLWLLPSL 152

[Close]
BLAST of Carg05247 vs. NCBI nr
Match: XP_022132440.1 (CASP-like protein ARALYDRAFT_485429 [Momordica charantia])

HSP 1 Score: 189.1 bits (479), Expect = 1.4e-44
Identity = 95/108 (87.96%), Postives = 103/108 (95.37%), Query Frame = 0 

Query: 94  YLVTIMGLMVPWSLTLAVVDGYSVFVRHLPPQARVTAIIVAGDWVLSFLALAASCSTASV 153
           YLVT+MGLMVPWSLTLAVVDGYSVFVRHLPPQ RVT+IIV GDWVLSFL+L A+CSTASV
Sbjct: 45  YLVTVMGLMVPWSLTLAVVDGYSVFVRHLPPQTRVTSIIVTGDWVLSFLSLGAACSTASV 104

Query: 154 ADVLLKVGVPYCSAKLCSRYRLSAAMAFLSWFLSLVSALFNLWLLPSL 202
           AD+LL+ G+ YCSAKLCSRYRLSAAMAFLSWFLSLVS+LFNLWLLPSL
Sbjct: 105 ADILLRAGISYCSAKLCSRYRLSAAMAFLSWFLSLVSSLFNLWLLPSL 152

[Close]
BLAST of Carg05247 vs. NCBI nr
Match: XP_004141947.1 (PREDICTED: CASP-like protein ARALYDRAFT_485429 [Cucumis sativus] >XP_008440180.1 PREDICTED: CASP-like protein ARALYDRAFT_485429 [Cucumis melo] >KGN48463.1 hypothetical protein Csa_6G488330 [Cucumis sativus])

HSP 1 Score: 187.2 bits (474), Expect = 5.5e-44
Identity = 94/108 (87.04%), Postives = 102/108 (94.44%), Query Frame = 0 

Query: 94  YLVTIMGLMVPWSLTLAVVDGYSVFVRHLPPQARVTAIIVAGDWVLSFLALAASCSTASV 153
           YLVT+MGLMVPWSLTLAVVDGYSVFVRHLPPQ RVT+IIV GDWVLSFL+L A+CSTASV
Sbjct: 45  YLVTVMGLMVPWSLTLAVVDGYSVFVRHLPPQTRVTSIIVTGDWVLSFLSLGAACSTASV 104

Query: 154 ADVLLKVGVPYCSAKLCSRYRLSAAMAFLSWFLSLVSALFNLWLLPSL 202
           AD+LL+ G+ YCSAKLCSRYRLSA MAFLSWFLSLVS+LFNLWLLPSL
Sbjct: 105 ADILLEAGISYCSAKLCSRYRLSAGMAFLSWFLSLVSSLFNLWLLPSL 152

[Close]
BLAST of Carg05247 vs. NCBI nr
Match: XP_022949698.1 (CASP-like protein ARALYDRAFT_485429 [Cucurbita moschata] >XP_023544965.1 CASP-like protein ARALYDRAFT_485429 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 186.0 bits (471), Expect = 1.2e-43
Identity = 93/108 (86.11%), Postives = 102/108 (94.44%), Query Frame = 0 

Query: 94  YLVTIMGLMVPWSLTLAVVDGYSVFVRHLPPQARVTAIIVAGDWVLSFLALAASCSTASV 153
           YLVT+MGLMVPWSLTLAVVDGYSVFVRHLPPQ RVT+IIV GDWVLSFL+L A+CSTASV
Sbjct: 45  YLVTVMGLMVPWSLTLAVVDGYSVFVRHLPPQTRVTSIIVTGDWVLSFLSLGAACSTASV 104

Query: 154 ADVLLKVGVPYCSAKLCSRYRLSAAMAFLSWFLSLVSALFNLWLLPSL 202
           AD+LL+ G+ YCSAKLC+RYRLSA MAFLSWFLSLVS+LFNLWLLPSL
Sbjct: 105 ADILLEAGISYCSAKLCNRYRLSAVMAFLSWFLSLVSSLFNLWLLPSL 152

[Close]
BLAST of Carg05247 vs. TAIR10
Match: AT4G37235.1 (Uncharacterised protein family (UPF0497))

HSP 1 Score: 114.8 bits (286), Expect = 6.3e-26
Identity = 64/108 (59.26%), Postives = 80/108 (74.07%), Query Frame = 0 

Query: 94  YLVTIMGLMVPWSLTLAVVDGYSVFVRHLPPQARVTAIIVAGDWVLSFLALAASCSTASV 153
           YLVT+MGL+ PWS+TLA+++ YS+ V+ LP QA V ++IVAGD+VLSFL+L  +CSTASV
Sbjct: 47  YLVTVMGLVTPWSVTLALMEAYSILVKKLPMQATVISVIVAGDFVLSFLSLGGACSTASV 106

Query: 154 ADVLLKVGVPYCSAKLCSRYRLSAAMAFLSWFLSLVSALFNLWLLPSL 202
           A +L+  G      K C RY+LSA MAFLS FLS  S  FN  LLPSL
Sbjct: 107 AVLLMDAG-----EKQCDRYKLSATMAFLSSFLSFASTFFNFCLLPSL 149

[Close]
BLAST of Carg05247 vs. TAIR10
Match: AT3G50810.1 (Uncharacterised protein family (UPF0497))

HSP 1 Score: 109.0 bits (271), Expect = 3.4e-24
Identity = 55/108 (50.93%), Postives = 74/108 (68.52%), Query Frame = 0 

Query: 94  YLVTIMGLMVPWSLTLAVVDGYSVFVRHLPPQARVTAIIVAGDWVLSFLALAASCSTASV 153
           YL  +M ++ PWS+ LA+ D YSV V+ LP + RV +I+ AGD+VLSFL+L  +C+ AS 
Sbjct: 45  YLAMVMAIVTPWSILLALTDTYSVLVKLLPQELRVLSIVFAGDFVLSFLSLGGACAVASA 104

Query: 154 ADVLLKVGVPYCSAKLCSRYRLSAAMAFLSWFLSLVSALFNLWLLPSL 202
            ++L       C   LC +Y++SAA+AFL WFL L SALFN W LPSL
Sbjct: 105 TELLASADGKICDGSLCIQYQVSAALAFLCWFLLLASALFNFWSLPSL 152

[Close]
BLAST of Carg05247 vs. TAIR10
Match: AT1G49405.1 (Uncharacterised protein family (UPF0497))

HSP 1 Score: 105.5 bits (262), Expect = 3.8e-23
Identity = 58/108 (53.70%), Postives = 77/108 (71.30%), Query Frame = 0 

Query: 94  YLVTIMGLMVPWSLTLAVVDGYSVFVRHLPPQARVTAIIVAGDWVLSFLALAASCSTASV 153
           YLVTIM L +PW+LTLA+VD Y V ++    + R+   I  GDWV+S LALA++ S ASV
Sbjct: 45  YLVTIMSLAIPWNLTLAMVDIYCVILQQPFQKPRILLAISIGDWVVSVLALASASSAASV 104

Query: 154 ADVLLKVGVPYCSAKLCSRYRLSAAMAFLSWFLSLVSALFNLWLLPSL 202
            D+ L+     C   +C+RY+ +A +AFL+WFLSL S+LFNLWLLPSL
Sbjct: 105 VDI-LRSNESSCPPTICNRYQFAATLAFLTWFLSLSSSLFNLWLLPSL 151

[Close]
BLAST of Carg05247 vs. TAIR10
Match: AT2G28370.1 (Uncharacterised protein family (UPF0497))

HSP 1 Score: 72.8 bits (177), Expect = 2.7e-13
Identity = 43/107 (40.19%), Postives = 62/107 (57.94%), Query Frame = 0 

Query: 94  YLVTIMGLMVPWSLTLAVVDGYSVFVRHLPPQARVTAIIVAGDWVLSFLALAASCSTASV 153
           YLV   GL   WSL LA+VD Y++ V+      R+ ++   GD V S L  AA+C++A +
Sbjct: 73  YLVAATGLQSLWSLALAMVDVYAIMVKRSLQNRRLVSLFAIGDGVTSTLTFAAACASAGI 132

Query: 154 ADVLLKVGVPYCSAKLCSRYRLSAAMAFLSWFLSLVSALFNLWLLPS 201
             VL+   +  C+   C ++  S A+AF+SWF +L S LFN W L S
Sbjct: 133 T-VLIDNDLNSCAQNHCVQFETSTALAFISWFAALPSFLFNFWSLAS 178

[Close]
BLAST of Carg05247 vs. TAIR10
Match: AT3G23200.1 (Uncharacterised protein family (UPF0497))

HSP 1 Score: 64.7 bits (156), Expect = 7.5e-11
Identity = 43/108 (39.81%), Postives = 63/108 (58.33%), Query Frame = 0 

Query: 94  YLVTIMGLMVPWSLTLAVVDGYSVFVRHLPPQARVTAIIVAGDWVLSFLALAASCSTASV 153
           YL+  MGL V WS  LA++D +++  +       + ++ V GDWV S L+LA + S+A +
Sbjct: 45  YLIAAMGLQVIWSFGLAILDTFALVRKKTLLSPVLVSLFVVGDWVTSTLSLAGASSSAGI 104

Query: 154 ADVLLKVGVPYCSAKL-CSRYRLSAAMAFLSWFLSLVSALFNLWLLPS 201
             VL    +  CS +  C +Y+LS A+AFL W    VS+L  LWLL S
Sbjct: 105 T-VLYFGDLGSCSFEAECWKYQLSVALAFLCWITIAVSSLTTLWLLAS 151

[Close]
BLAST of Carg05247 vs. Swiss-Prot
Match: sp|Q66GI1|CSPLT_ARATH (CASP-like protein 5C1 OS=Arabidopsis thaliana OX=3702 GN=At4g37235 PE=2 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 1.1e-24
Identity = 64/108 (59.26%), Postives = 80/108 (74.07%), Query Frame = 0 

Query: 94  YLVTIMGLMVPWSLTLAVVDGYSVFVRHLPPQARVTAIIVAGDWVLSFLALAASCSTASV 153
           YLVT+MGL+ PWS+TLA+++ YS+ V+ LP QA V ++IVAGD+VLSFL+L  +CSTASV
Sbjct: 47  YLVTVMGLVTPWSVTLALMEAYSILVKKLPMQATVISVIVAGDFVLSFLSLGGACSTASV 106

Query: 154 ADVLLKVGVPYCSAKLCSRYRLSAAMAFLSWFLSLVSALFNLWLLPSL 202
           A +L+  G      K C RY+LSA MAFLS FLS  S  FN  LLPSL
Sbjct: 107 AVLLMDAG-----EKQCDRYKLSATMAFLSSFLSFASTFFNFCLLPSL 149

[Close]
BLAST of Carg05247 vs. Swiss-Prot
Match: sp|D7LTJ4|CSPLN_ARALL (CASP-like protein ARALYDRAFT_485429 OS=Arabidopsis lyrata subsp. lyrata OX=81972 GN=ARALYDRAFT_485429 PE=3 SV=2)

HSP 1 Score: 111.3 bits (277), Expect = 1.3e-23
Identity = 56/108 (51.85%), Postives = 75/108 (69.44%), Query Frame = 0 

Query: 94  YLVTIMGLMVPWSLTLAVVDGYSVFVRHLPPQARVTAIIVAGDWVLSFLALAASCSTASV 153
           YL T+M ++ PWS+ LA+ D YSV V+ LP + RV +I+ AGD+VLSFL+L  +C+ AS 
Sbjct: 45  YLATVMAIVTPWSILLALTDTYSVLVKLLPQELRVLSIVFAGDFVLSFLSLGGACAVASA 104

Query: 154 ADVLLKVGVPYCSAKLCSRYRLSAAMAFLSWFLSLVSALFNLWLLPSL 202
            ++L       C   LC +Y++SAA+AFL WFL L SALFN W LPSL
Sbjct: 105 TELLASADGKICDGNLCIQYQVSAALAFLCWFLLLASALFNFWSLPSL 152

[Close]
BLAST of Carg05247 vs. Swiss-Prot
Match: sp|B8BPI2|CSPLU_ORYSI (CASP-like protein 5C1 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_38237 PE=2 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 2.8e-23
Identity = 58/107 (54.21%), Postives = 78/107 (72.90%), Query Frame = 0 

Query: 94  YLVTIMGLMVPWSLTLAVVDGYSVFVRHLPPQARVTAIIVAGDWVLSFLALAASCSTASV 153
           +LVTIMGL++PWS TLA++D YS+ V        V  I+V GDWVL+ L+LAA+ S+A+V
Sbjct: 49  FLVTIMGLVIPWSCTLAMIDVYSILVGCPLRVPGVMVIVVIGDWVLAILSLAAASSSAAV 108

Query: 154 ADVLLKVGVPYCSAKLCSRYRLSAAMAFLSWFLSLVSALFNLWLLPS 201
            D+LL+    +CS + C RY+LSA MAFLSWFL+  S+LFNLW + S
Sbjct: 109 IDLLLQFHGSHCSPRFCGRYQLSAMMAFLSWFLTAASSLFNLWFIAS 155

[Close]
BLAST of Carg05247 vs. Swiss-Prot
Match: sp|Q10EJ2|CSPLU_ORYSJ (CASP-like protein 5C1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0767900 PE=2 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 2.8e-23
Identity = 58/107 (54.21%), Postives = 78/107 (72.90%), Query Frame = 0 

Query: 94  YLVTIMGLMVPWSLTLAVVDGYSVFVRHLPPQARVTAIIVAGDWVLSFLALAASCSTASV 153
           +LVTIMGL++PWS TLA++D YS+ V        V  I+V GDWVL+ L+LAA+ S+A+V
Sbjct: 49  FLVTIMGLVIPWSCTLAMIDVYSILVGCPLRVPGVMVIVVIGDWVLAILSLAAASSSAAV 108

Query: 154 ADVLLKVGVPYCSAKLCSRYRLSAAMAFLSWFLSLVSALFNLWLLPS 201
            D+LL+    +CS + C RY+LSA MAFLSWFL+  S+LFNLW + S
Sbjct: 109 IDLLLQFHGSHCSPRFCGRYQLSAMMAFLSWFLTAASSLFNLWFIAS 155

[Close]
BLAST of Carg05247 vs. Swiss-Prot
Match: sp|P0CB17|CSPLH_ARATH (CASP-like protein 5C2 OS=Arabidopsis thaliana OX=3702 GN=At3g50810 PE=2 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 6.2e-23
Identity = 55/108 (50.93%), Postives = 74/108 (68.52%), Query Frame = 0 

Query: 94  YLVTIMGLMVPWSLTLAVVDGYSVFVRHLPPQARVTAIIVAGDWVLSFLALAASCSTASV 153
           YL  +M ++ PWS+ LA+ D YSV V+ LP + RV +I+ AGD+VLSFL+L  +C+ AS 
Sbjct: 45  YLAMVMAIVTPWSILLALTDTYSVLVKLLPQELRVLSIVFAGDFVLSFLSLGGACAVASA 104

Query: 154 ADVLLKVGVPYCSAKLCSRYRLSAAMAFLSWFLSLVSALFNLWLLPSL 202
            ++L       C   LC +Y++SAA+AFL WFL L SALFN W LPSL
Sbjct: 105 TELLASADGKICDGSLCIQYQVSAALAFLCWFLLLASALFNFWSLPSL 152

[Close]
BLAST of Carg05247 vs. TrEMBL
Match: tr|A0A1S3B191|A0A1S3B191_CUCME (CASP-like protein OS=Cucumis melo OX=3656 GN=LOC103484722 PE=3 SV=1)

HSP 1 Score: 187.2 bits (474), Expect = 3.6e-44
Identity = 94/108 (87.04%), Postives = 102/108 (94.44%), Query Frame = 0 

Query: 94  YLVTIMGLMVPWSLTLAVVDGYSVFVRHLPPQARVTAIIVAGDWVLSFLALAASCSTASV 153
           YLVT+MGLMVPWSLTLAVVDGYSVFVRHLPPQ RVT+IIV GDWVLSFL+L A+CSTASV
Sbjct: 45  YLVTVMGLMVPWSLTLAVVDGYSVFVRHLPPQTRVTSIIVTGDWVLSFLSLGAACSTASV 104

Query: 154 ADVLLKVGVPYCSAKLCSRYRLSAAMAFLSWFLSLVSALFNLWLLPSL 202
           AD+LL+ G+ YCSAKLCSRYRLSA MAFLSWFLSLVS+LFNLWLLPSL
Sbjct: 105 ADILLEAGISYCSAKLCSRYRLSAGMAFLSWFLSLVSSLFNLWLLPSL 152

[Close]
BLAST of Carg05247 vs. TrEMBL
Match: tr|A0A0A0KG19|A0A0A0KG19_CUCSA (CASP-like protein OS=Cucumis sativus OX=3659 GN=Csa_6G488330 PE=3 SV=1)

HSP 1 Score: 187.2 bits (474), Expect = 3.6e-44
Identity = 94/108 (87.04%), Postives = 102/108 (94.44%), Query Frame = 0 

Query: 94  YLVTIMGLMVPWSLTLAVVDGYSVFVRHLPPQARVTAIIVAGDWVLSFLALAASCSTASV 153
           YLVT+MGLMVPWSLTLAVVDGYSVFVRHLPPQ RVT+IIV GDWVLSFL+L A+CSTASV
Sbjct: 45  YLVTVMGLMVPWSLTLAVVDGYSVFVRHLPPQTRVTSIIVTGDWVLSFLSLGAACSTASV 104

Query: 154 ADVLLKVGVPYCSAKLCSRYRLSAAMAFLSWFLSLVSALFNLWLLPSL 202
           AD+LL+ G+ YCSAKLCSRYRLSA MAFLSWFLSLVS+LFNLWLLPSL
Sbjct: 105 ADILLEAGISYCSAKLCSRYRLSAGMAFLSWFLSLVSSLFNLWLLPSL 152

[Close]
BLAST of Carg05247 vs. TrEMBL
Match: tr|A0A1R3INM7|A0A1R3INM7_9ROSI (CASP-like protein OS=Corchorus olitorius OX=93759 GN=COLO4_22172 PE=3 SV=1)

HSP 1 Score: 152.9 bits (385), Expect = 7.6e-34
Identity = 75/109 (68.81%), Postives = 92/109 (84.40%), Query Frame = 0 

Query: 93  SYLVTIMGLMVPWSLTLAVVDGYSVFVRHLPPQARVTAIIVAGDWVLSFLALAASCSTAS 152
           SYLVTIMGL+ PWS++LA+VD YSVF++ LP Q ++  I++ GDW LSFL+LAA+CSTAS
Sbjct: 45  SYLVTIMGLVTPWSVSLALVDAYSVFIKGLPRQPKILLIVIVGDWALSFLSLAAACSTAS 104

Query: 153 VADVLLKVGVPYCSAKLCSRYRLSAAMAFLSWFLSLVSALFNLWLLPSL 202
           V  +L+ VG  +C +KLCSRY+LSAAMAFLSWFLSL S LFNLWLLPSL
Sbjct: 105 VTSLLVNVGTSFCPSKLCSRYQLSAAMAFLSWFLSLASTLFNLWLLPSL 153

[Close]
BLAST of Carg05247 vs. TrEMBL
Match: tr|A0A067K6V0|A0A067K6V0_JATCU (CASP-like protein OS=Jatropha curcas OX=180498 GN=JCGZ_12293 PE=3 SV=1)

HSP 1 Score: 152.5 bits (384), Expect = 9.9e-34
Identity = 78/108 (72.22%), Postives = 91/108 (84.26%), Query Frame = 0 

Query: 94  YLVTIMGLMVPWSLTLAVVDGYSVFVRHLPPQARVTAIIVAGDWVLSFLALAASCSTASV 153
           YLVT+MGL++PWSLTL VVD YSVFV+ LP Q R+ + I+ GDWVLSFL+LAA+ S ASV
Sbjct: 45  YLVTVMGLVIPWSLTLVVVDVYSVFVKCLPHQPRILSAIIIGDWVLSFLSLAAASSAASV 104

Query: 154 ADVLLKVGVPYCSAKLCSRYRLSAAMAFLSWFLSLVSALFNLWLLPSL 202
            D+LL VG  YC AKLC+RY+LSAAMAFLSWFLS  S+LFNLWLLPSL
Sbjct: 105 TDLLLDVGASYCPAKLCNRYQLSAAMAFLSWFLSFASSLFNLWLLPSL 152

[Close]
BLAST of Carg05247 vs. TrEMBL
Match: tr|A0A1U8K8L8|A0A1U8K8L8_GOSHI (CASP-like protein OS=Gossypium hirsutum OX=3635 GN=LOC107914432 PE=3 SV=1)

HSP 1 Score: 151.8 bits (382), Expect = 1.7e-33
Identity = 74/109 (67.89%), Postives = 90/109 (82.57%), Query Frame = 0 

Query: 93  SYLVTIMGLMVPWSLTLAVVDGYSVFVRHLPPQARVTAIIVAGDWVLSFLALAASCSTAS 152
           SYLVT+M L+ PWS++LA++D YSVF++ LP Q RV  I++ GDW LSFL+LAA+CSTAS
Sbjct: 45  SYLVTVMALVTPWSVSLALIDAYSVFIKCLPRQPRVLLIVIVGDWALSFLSLAAACSTAS 104

Query: 153 VADVLLKVGVPYCSAKLCSRYRLSAAMAFLSWFLSLVSALFNLWLLPSL 202
           V  +L+ VG PYC +KLCSRY+ SAAMAFLSWFLS  S LFNLWLLPSL
Sbjct: 105 VTSLLVNVGTPYCWSKLCSRYQFSAAMAFLSWFLSFASTLFNLWLLPSL 153

The following BLAST results are available for this feature:
BLAST of Carg05247 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022962700.11.9e-49100.00CASP-like protein ARALYDRAFT_485429 [Cucurbita moschata] >XP_023517373.1 CASP-li... [more]
XP_023003597.12.5e-4999.07CASP-like protein ARALYDRAFT_485429 [Cucurbita maxima][more]
XP_022132440.11.4e-4487.96CASP-like protein ARALYDRAFT_485429 [Momordica charantia][more]
XP_004141947.15.5e-4487.04PREDICTED: CASP-like protein ARALYDRAFT_485429 [Cucumis sativus] >XP_008440180.1... [more]
XP_022949698.11.2e-4386.11CASP-like protein ARALYDRAFT_485429 [Cucurbita moschata] >XP_023544965.1 CASP-li... [more]
BLAST of Carg05247 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G37235.16.3e-2659.26Uncharacterised protein family (UPF0497)[more]
AT3G50810.13.4e-2450.93Uncharacterised protein family (UPF0497)[more]
AT1G49405.13.8e-2353.70Uncharacterised protein family (UPF0497)[more]
AT2G28370.12.7e-1340.19Uncharacterised protein family (UPF0497)[more]
AT3G23200.17.5e-1139.81Uncharacterised protein family (UPF0497)[more]
BLAST of Carg05247 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q66GI1|CSPLT_ARATH1.1e-2459.26CASP-like protein 5C1 OS=Arabidopsis thaliana OX=3702 GN=At4g37235 PE=2 SV=1[more]
sp|D7LTJ4|CSPLN_ARALL1.3e-2351.85CASP-like protein ARALYDRAFT_485429 OS=Arabidopsis lyrata subsp. lyrata OX=81972... [more]
sp|B8BPI2|CSPLU_ORYSI2.8e-2354.21CASP-like protein 5C1 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_38237 PE=2 S... [more]
sp|Q10EJ2|CSPLU_ORYSJ2.8e-2354.21CASP-like protein 5C1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0767900 P... [more]
sp|P0CB17|CSPLH_ARATH6.2e-2350.93CASP-like protein 5C2 OS=Arabidopsis thaliana OX=3702 GN=At3g50810 PE=2 SV=1[more]
BLAST of Carg05247 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3B191|A0A1S3B191_CUCME3.6e-4487.04CASP-like protein OS=Cucumis melo OX=3656 GN=LOC103484722 PE=3 SV=1[more]
tr|A0A0A0KG19|A0A0A0KG19_CUCSA3.6e-4487.04CASP-like protein OS=Cucumis sativus OX=3659 GN=Csa_6G488330 PE=3 SV=1[more]
tr|A0A1R3INM7|A0A1R3INM7_9ROSI7.6e-3468.81CASP-like protein OS=Corchorus olitorius OX=93759 GN=COLO4_22172 PE=3 SV=1[more]
tr|A0A067K6V0|A0A067K6V0_JATCU9.9e-3472.22CASP-like protein OS=Jatropha curcas OX=180498 GN=JCGZ_12293 PE=3 SV=1[more]
tr|A0A1U8K8L8|A0A1U8K8L8_GOSHI1.7e-3367.89CASP-like protein OS=Gossypium hirsutum OX=3635 GN=LOC107914432 PE=3 SV=1[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR006702CASP_dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg05247-RACarg05247-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006702Casparian strip membrane protein domainPFAMPF04535DUF588coord: 93..186
e-value: 4.2E-14
score: 52.5
NoneNo IPR availablePANTHERPTHR32021FAMILY NOT NAMEDcoord: 93..201
NoneNo IPR availablePANTHERPTHR32021:SF4CASP-LIKE PROTEIN 5C3coord: 93..201

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Carg05247Cla001789Watermelon (97103) v1carwmB0805
Carg05247Csa6G488330Cucumber (Chinese Long) v2carcuB0826
Carg05247MELO3C007506Melon (DHL92) v3.5.1carmeB0807
Carg05247ClCG01G016360Watermelon (Charleston Gray)carwcgB0778
Carg05247CSPI06G27520Wild cucumber (PI 183967)carcpiB0846
Carg05247Cucsa.101890Cucumber (Gy14) v1carcgyB0918
Carg05247CmaCh07G007400Cucurbita maxima (Rimu)carcmaB1130
Carg05247CmaCh03G010220Cucurbita maxima (Rimu)carcmaB1125
Carg05247CmoCh07G007600Cucurbita moschata (Rifu)carcmoB1100
Carg05247Lsi01G010380Bottle gourd (USVL1VR-Ls)carlsiB742
Carg05247Cp4.1LG10g02910Cucurbita pepo (Zucchini)carcpeB1128
Carg05247Cp4.1LG19g11530Cucurbita pepo (Zucchini)carcpeB1135
Carg05247CsGy6G026880Cucumber (Gy14) v2carcgybB0799
Carg05247MELO3C007506.2Melon (DHL92) v3.6.1carmedB0818
Carg05247CsaV3_6G042670Cucumber (Chinese Long) v3carcucB0849
Carg05247Cla97C01G015360Watermelon (97103) v2carwmbB0839
Carg05247Bhi03G001506Wax gourdcarwgoB0944
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Carg05247Carg00880Silver-seed gourdcarcarB428
The following block(s) are covering this gene:
GeneOrganismBlock
Carg05247Silver-seed gourdcarcarB225
Carg05247Cucumber (Gy14) v2carcgybB0792
Carg05247Cucumber (Gy14) v2carcgybB0793
Carg05247Cucumber (Gy14) v2carcgybB0800
Carg05247Cucumber (Gy14) v1carcgyB0920
Carg05247Cucumber (Gy14) v1carcgyB0921
Carg05247Cucumber (Gy14) v1carcgyB0924
Carg05247Cucurbita maxima (Rimu)carcmaB1118
Carg05247Cucurbita maxima (Rimu)carcmaB1127
Carg05247Cucurbita moschata (Rifu)carcmoB1089
Carg05247Cucurbita moschata (Rifu)carcmoB1095
Carg05247Cucurbita moschata (Rifu)carcmoB1097
Carg05247Cucurbita pepo (Zucchini)carcpeB1129
Carg05247Cucurbita pepo (Zucchini)carcpeB1130
Carg05247Wild cucumber (PI 183967)carcpiB0839
Carg05247Wild cucumber (PI 183967)carcpiB0849
Carg05247Cucumber (Chinese Long) v2carcuB0819
Carg05247Cucumber (Chinese Long) v2carcuB0827
Carg05247Cucumber (Chinese Long) v3carcucB0842
Carg05247Cucumber (Chinese Long) v3carcucB0843
Carg05247Bottle gourd (USVL1VR-Ls)carlsiB738
Carg05247Bottle gourd (USVL1VR-Ls)carlsiB746
Carg05247Melon (DHL92) v3.5.1carmeB0802
Carg05247Melon (DHL92) v3.6.1carmedB0814
Carg05247Watermelon (Charleston Gray)carwcgB0786
Carg05247Watermelon (Charleston Gray)carwcgB0790
Carg05247Watermelon (97103) v1carwmB0802
Carg05247Watermelon (97103) v1carwmB0812
Carg05247Watermelon (97103) v2carwmbB0846
Carg05247Watermelon (97103) v2carwmbB0850
Carg05247Wax gourdcarwgoB0941