Carg05001 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg05001
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	MADS-box transcription factor
Location	Cucurbita_argyrosperma_scaffold_060 : 740457 .. 741579 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTAGATCAGCTCACTGATCTTCAACGTAAGGTATGAGGACACGAACACATATACGACACGACACGAACACTATAATTATATGGTTATAAAAATGAGTTTGATATGTTTCGATCTAATAAGTTAAGAGTATTAAATCTTGTTTTTGTTTAAACAAACTTTCAGGAACATCTTCTTAACGAAGCAAACAAGACACTGAAACAAAGGGTATAAAAACATATCTGTTGATATTTTTTTTTAATAAAAAAAAAGTTAGAAAATTTTGTAATTGGTGTAAATTTGTGGATTGCAGTTGATTGAAGGGTATCAAGTAAATGCGCTCCAATTGAACCAAAGTGCTGATGATATGATGTATGGAAGACAACAAGCTCAGCCTCCTAGCGATGCCTTCTTTCATCCTCTAGATTGTGAACCCACCTTACAAATTGGGTAAATATTCTTCTATTCTTTCCAAAATCTTTTATTCTTACGTTTTTTTTAACGTCTTGGCGCTGGTACGGTCTGTGTACATAGTTTACGCTAGCTGAGTTATGCTGAGTATTTGAACTTTTGATCTCTCGATTGAAAATACATAGTTTATACTAGTTGAGTTACGTTCATTTCGTGTATTACGATTAGCATGATTTACGATTTGCTATGTTGAGGATTGAACTTTTGACATCTCGGAGAATACATAGTTTGACCTCTTGATCAAGAATACGTAGTTTATGCTAGATGAGCTATGCTAATGATTTGAATTTTTGACCTCTTGATCGACAACACGCAGTTTAAGCTAAACTACGTTCATTTCGTGTATTACAATTAGCATGGTTTATGCTAGTTCTAGTCCTACCTAGAATCATAACACCCAATTCAAAGTAGGTCGGGGTGAGAATTTTGTAAGATTAATGTGAAATTGAAGAACAAATTTATAAGAAGCTAAAGAATGAAGATGATTAATTTGCAGGTATCAACCAGATCCCATAACAGTGGTGACTGCTGGGCCGAGCATGAACAATTTCCTCCCAGGATGGTTGCCTTGAGAAACAACAAGGAGATGGAAATTTTTCCATTCAAAAATTGGAGAAAGAAAAGGGCAGTCATTTTCTTTGCTTCTGTTGCTTACCTCTAAACCCCTCCTCCC

mRNA sequence

ATGCTAGATCAGCTCACTGATCTTCAACGTAAGGAACATCTTCTTAACGAAGCAAACAAGACACTGAAACAAAGGTTGATTGAAGGGTATCAAGTAAATGCGCTCCAATTGAACCAAAGTGCTGATGATATGATGTATGGAAGACAACAAGCTCAGCCTCCTAGCGATGCCTTCTTTCATCCTCTAGATTGTGAACCCACCTTACAAATTGGGTATCAACCAGATCCCATAACAGTGGTGACTGCTGGGCCGAGCATGAACAATTTCCTCCCAGGATGGTTGCCTTGAGAAACAACAAGGAGATGGAAATTTTTCCATTCAAAAATTGGAGAAAGAAAAGGGCAGTCATTTTCTTTGCTTCTGTTGCTTACCTCTAAACCCCTCCTCCC

Coding sequence (CDS)

ATGCTAGATCAGCTCACTGATCTTCAACGTAAGGAACATCTTCTTAACGAAGCAAACAAGACACTGAAACAAAGGTTGATTGAAGGGTATCAAGTAAATGCGCTCCAATTGAACCAAAGTGCTGATGATATGATGTATGGAAGACAACAAGCTCAGCCTCCTAGCGATGCCTTCTTTCATCCTCTAGATTGTGAACCCACCTTACAAATTGGGTATCAACCAGATCCCATAACAGTGGTGACTGCTGGGCCGAGCATGAACAATTTCCTCCCAGGATGGTTGCCTTGA

Protein sequence

MLDQLTDLQRKEHLLNEANKTLKQRLIEGYQVNALQLNQSADDMMYGRQQAQPPSDAFFHPLDCEPTLQIGYQPDPITVVTAGPSMNNFLPGWLP

Homology

[Close]

BLAST of Carg05001 vs. NCBI nr
Match: XP_022959858.1 (agamous-like MADS-box protein AGL9 homolog isoform X1 [Cucurbita moschata])

HSP 1 Score: 198.4 bits (503), Expect = 1.1e-47
Identity = 95/95 (100.00%), Postives = 95/95 (100.00%), Query Frame = 0


Query: 1   MLDQLTDLQRKEHLLNEANKTLKQRLIEGYQVNALQLNQSADDMMYGRQQAQPPSDAFFH 60
           MLDQLTDLQRKEHLLNEANKTLKQRLIEGYQVNALQLNQSADDMMYGRQQAQPPSDAFFH
Sbjct: 160 MLDQLTDLQRKEHLLNEANKTLKQRLIEGYQVNALQLNQSADDMMYGRQQAQPPSDAFFH 219

Query: 61  PLDCEPTLQIGYQPDPITVVTAGPSMNNFLPGWLP 96
           PLDCEPTLQIGYQPDPITVVTAGPSMNNFLPGWLP
Sbjct: 220 PLDCEPTLQIGYQPDPITVVTAGPSMNNFLPGWLP 254

[Close]

BLAST of Carg05001 vs. NCBI nr
Match: XP_022959859.1 (agamous-like MADS-box protein AGL9 homolog isoform X2 [Cucurbita moschata] >XP_023004224.1 agamous-like MADS-box protein AGL9 homolog isoform X2 [Cucurbita maxima] >XP_023514991.1 agamous-like MADS-box protein AGL9 homolog isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 198.4 bits (503), Expect = 1.1e-47
Identity = 95/95 (100.00%), Postives = 95/95 (100.00%), Query Frame = 0


Query: 1   MLDQLTDLQRKEHLLNEANKTLKQRLIEGYQVNALQLNQSADDMMYGRQQAQPPSDAFFH 60
           MLDQLTDLQRKEHLLNEANKTLKQRLIEGYQVNALQLNQSADDMMYGRQQAQPPSDAFFH
Sbjct: 148 MLDQLTDLQRKEHLLNEANKTLKQRLIEGYQVNALQLNQSADDMMYGRQQAQPPSDAFFH 207

Query: 61  PLDCEPTLQIGYQPDPITVVTAGPSMNNFLPGWLP 96
           PLDCEPTLQIGYQPDPITVVTAGPSMNNFLPGWLP
Sbjct: 208 PLDCEPTLQIGYQPDPITVVTAGPSMNNFLPGWLP 242

[Close]

BLAST of Carg05001 vs. NCBI nr
Match: XP_023004223.1 (agamous-like MADS-box protein AGL9 homolog isoform X1 [Cucurbita maxima])

HSP 1 Score: 198.4 bits (503), Expect = 1.1e-47
Identity = 95/95 (100.00%), Postives = 95/95 (100.00%), Query Frame = 0


Query: 1   MLDQLTDLQRKEHLLNEANKTLKQRLIEGYQVNALQLNQSADDMMYGRQQAQPPSDAFFH 60
           MLDQLTDLQRKEHLLNEANKTLKQRLIEGYQVNALQLNQSADDMMYGRQQAQPPSDAFFH
Sbjct: 159 MLDQLTDLQRKEHLLNEANKTLKQRLIEGYQVNALQLNQSADDMMYGRQQAQPPSDAFFH 218

Query: 61  PLDCEPTLQIGYQPDPITVVTAGPSMNNFLPGWLP 96
           PLDCEPTLQIGYQPDPITVVTAGPSMNNFLPGWLP
Sbjct: 219 PLDCEPTLQIGYQPDPITVVTAGPSMNNFLPGWLP 253

[Close]

BLAST of Carg05001 vs. NCBI nr
Match: XP_023514992.1 (agamous-like MADS-box protein AGL9 homolog isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 198.4 bits (503), Expect = 1.1e-47
Identity = 95/95 (100.00%), Postives = 95/95 (100.00%), Query Frame = 0


Query: 1   MLDQLTDLQRKEHLLNEANKTLKQRLIEGYQVNALQLNQSADDMMYGRQQAQPPSDAFFH 60
           MLDQLTDLQRKEHLLNEANKTLKQRLIEGYQVNALQLNQSADDMMYGRQQAQPPSDAFFH
Sbjct: 165 MLDQLTDLQRKEHLLNEANKTLKQRLIEGYQVNALQLNQSADDMMYGRQQAQPPSDAFFH 224

Query: 61  PLDCEPTLQIGYQPDPITVVTAGPSMNNFLPGWLP 96
           PLDCEPTLQIGYQPDPITVVTAGPSMNNFLPGWLP
Sbjct: 225 PLDCEPTLQIGYQPDPITVVTAGPSMNNFLPGWLP 259

[Close]

BLAST of Carg05001 vs. NCBI nr
Match: XP_022155454.1 (agamous-like MADS-box protein AGL9 homolog [Momordica charantia])

HSP 1 Score: 196.8 bits (499), Expect = 3.3e-47
Identity = 93/95 (97.89%), Postives = 95/95 (100.00%), Query Frame = 0


Query: 1   MLDQLTDLQRKEHLLNEANKTLKQRLIEGYQVNALQLNQSADDMMYGRQQAQPPSDAFFH 60
           MLDQLTDLQRKEHLLNEANKTLKQRL+EGYQVNALQLNQSADDMMYGRQQAQPP+DAFFH
Sbjct: 148 MLDQLTDLQRKEHLLNEANKTLKQRLVEGYQVNALQLNQSADDMMYGRQQAQPPTDAFFH 207

Query: 61  PLDCEPTLQIGYQPDPITVVTAGPSMNNFLPGWLP 96
           PLDCEPTLQIGYQPDPITVVTAGPSMNNFLPGWLP
Sbjct: 208 PLDCEPTLQIGYQPDPITVVTAGPSMNNFLPGWLP 242

[Close]

BLAST of Carg05001 vs. TAIR10
Match: AT1G24260.2 (K-box region and MADS-box transcription factor family protein )

HSP 1 Score: 89.7 bits (221), Expect = 1.0e-18
Identity = 52/98 (53.06%), Postives = 65/98 (66.33%), Query Frame = 0


Query: 1   MLDQLTDLQRKEHLLNEANKTLKQRLIEGYQVNALQLNQSADDM-MYGR--QQAQPPSDA 60
           MLDQL DLQ KE +L E NKTL+ RL +GYQ+  LQLN + +++  YGR          A
Sbjct: 150 MLDQLNDLQSKERMLTETNKTLRLRLADGYQM-PLQLNPNQEEVDHYGRXXXXXXXXXQA 209

Query: 61  FFHPLDCEPTLQIGYQPDPITVVTAGPSMNNFLPGWLP 96
           FF PL+CEP LQIGYQ      + AGPS+NN++ GWLP
Sbjct: 210 FFQPLECEPILQIGYQGQQ-DGMGAGPSVNNYMLGWLP 245

[Close]

BLAST of Carg05001 vs. TAIR10
Match: AT3G02310.1 (K-box region and MADS-box transcription factor family protein )

HSP 1 Score: 62.4 bits (150), Expect = 1.7e-10
Identity = 37/105 (35.24%), Postives = 55/105 (52.38%), Query Frame = 0


Query: 1   MLDQLTDLQRKEHLLNEANKTLKQRL-----IEGYQVNALQLNQSADDMMYGRQQAQPPS 60
           MLDQL+DLQ KEH+L +AN+ L  +L     +  + +          ++ YG  QA   S
Sbjct: 147 MLDQLSDLQGKEHILLDANRALSMKLEDMIGVRHHHIGGGWEGGDQQNIAYGHPQAH--S 206

Query: 61  DAFFHPLDCEPTLQIGYQ----PDPITVVTAGPSM--NNFLPGWL 95
              +  L+C+PTLQIGY      + + V   G S   N ++PGW+
Sbjct: 207 QGLYQSLECDPTLQIGYSHPVCSEQMAVTVQGQSQQGNGYIPGWM 249

[Close]

BLAST of Carg05001 vs. TAIR10
Match: AT5G15800.2 (K-box region and MADS-box transcription factor family protein )

HSP 1 Score: 52.0 bits (123), Expect = 2.4e-07
Identity = 36/117 (30.77%), Postives = 53/117 (45.30%), Query Frame = 0


Query: 1   MLDQLTDLQRKEHLLNEANKTLKQRLIEGYQVNALQLNQSA------DDMMYGRQQAQPP 60
           MLDQL+DLQ KE +L E N+ L  +L +   V +  +           ++ Y   QAQ  
Sbjct: 147 MLDQLSDLQNKEQMLLETNRALAMKLDDMIGVRSHHMGGGGGWEGGEQNVTYAHHQAQ-- 206

Query: 61  SDAFFHPLDCEPTLQIG---------------YQPDPITVVTAGPSM--NNFLPGWL 95
           S   + PL+C PTLQ+G                  + IT  T   +   N ++PGW+
Sbjct: 207 SQGLYQPLECNPTLQMGCCFGDXXXXXRYDNPVCSEQITATTQAQAQQGNGYIPGWM 261

[Close]

BLAST of Carg05001 vs. Swiss-Prot
Match: sp|Q03489|AGL9_PETHY (Agamous-like MADS-box protein AGL9 homolog OS=Petunia hybrida OX=4102 GN=FBP2 PE=1 SV=2)

HSP 1 Score: 136.0 bits (341), Expect = 2.2e-31
Identity = 67/95 (70.53%), Postives = 76/95 (80.00%), Query Frame = 0


Query: 1   MLDQLTDLQRKEHLLNEANKTLKQRLIEGYQVNALQLNQSADDMMYGRQQAQPPSDAFFH 60
           MLDQL DLQRKEH LNEAN+TLKQRL+EG  +N LQ  Q+A D+ YGRQ  Q   D FFH
Sbjct: 148 MLDQLQDLQRKEHALNEANRTLKQRLMEGSTLN-LQWQQNAQDVGYGRQATQTQGDGFFH 207

Query: 61  PLDCEPTLQIGYQPDPITVVTAGPSMNNFLPGWLP 96
           PL+CEPTLQIGYQ DPITV  AGPS+NN++ GWLP
Sbjct: 208 PLECEPTLQIGYQNDPITVGGAGPSVNNYMAGWLP 241

[Close]

BLAST of Carg05001 vs. Swiss-Prot
Match: sp|O65874|MTF1_PEA (MADS-box transcription factor 1 OS=Pisum sativum OX=3888 GN=MTF1 PE=2 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 5.7e-27
Identity = 66/99 (66.67%), Postives = 77/99 (77.78%), Query Frame = 0


Query: 1   MLDQLTDLQRKEHLLNEANKTLKQRLIEGYQVNALQLNQSADDMMYGR-QQAQPPSDAFF 60
           MLDQL DLQRKEHLL EAN+ L+QR+ EGYQ+N+LQLN SA+DM YGR  Q     D  F
Sbjct: 150 MLDQLGDLQRKEHLLCEANRALRQRM-EGYQINSLQLNLSAEDMGYGRHHQGHTHGDELF 209

Query: 61  --HPLDCEPTLQIGY-QPDPITVVTAGPSMNNFLPGWLP 96
              P++CEPTLQIGY Q DP +VVTAGPSMNN++ GWLP
Sbjct: 210 QVQPIECEPTLQIGYHQGDPGSVVTAGPSMNNYMGGWLP 247

[Close]

BLAST of Carg05001 vs. Swiss-Prot
Match: sp|O04067|AGL9_SINAL (Agamous-like MADS-box protein AGL9 homolog OS=Sinapis alba OX=3728 GN=AGL9 PE=2 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 1.4e-20
Identity = 56/100 (56.00%), Postives = 68/100 (68.00%), Query Frame = 0


Query: 1   MLDQLTDLQRKEHLLNEANKTLKQRLIEGYQVNALQLNQSADD--MMYGR---QQAQPPS 60
           MLDQL DLQ KE +LNE NKTL+ RL +GYQ+  LQLN + +D  + YGR   QQ Q   
Sbjct: 150 MLDQLNDLQSKERMLNETNKTLRLRLADGYQM-PLQLNPNQEDHHVDYGRHDQQQQQNSH 209

Query: 61  DAFFHPLDCEPTLQIGYQPDPITVVTAGPSMNNFLPGWLP 96
            AFF PL+CEP LQ+GYQ      + AGPS NN++ GWLP
Sbjct: 210 HAFFQPLECEPILQMGYQGQQDHGMEAGPSENNYMLGWLP 248

[Close]

BLAST of Carg05001 vs. Swiss-Prot
Match: sp|Q38694|AGL9_ARADE (Agamous-like MADS-box protein AGL9 homolog OS=Aranda deborah OX=29714 PE=2 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 3.4e-19
Identity = 55/98 (56.12%), Postives = 68/98 (69.39%), Query Frame = 0


Query: 1   MLDQLTDLQRKEHLLNEANKTLKQRLIEGYQVNALQL--NQSADDMMYGRQQAQPPSDAF 60
           MLDQL DLQR+E +L EANKTLK+R  E  Q N  Q+    +   + YGRQ AQ   +AF
Sbjct: 146 MLDQLADLQRREQMLCEANKTLKRRFEESSQANQQQVWDPSNTHAVGYGRQPAQHHGEAF 205

Query: 61  FHPLDCEPTLQIGYQPDPITVVTAGPS-MNNFL-PGWL 95
           +HPL+CEPTLQIGY  D IT+ TA  S +NN++ PGWL
Sbjct: 206 YHPLECEPTLQIGYHSD-ITMATATASTVNNYMPPGWL 242

[Close]

BLAST of Carg05001 vs. Swiss-Prot
Match: sp|O22456|SEP3_ARATH (Developmental protein SEPALLATA 3 OS=Arabidopsis thaliana OX=3702 GN=SEP3 PE=1 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 1.8e-17
Identity = 52/98 (53.06%), Postives = 65/98 (66.33%), Query Frame = 0


Query: 1   MLDQLTDLQRKEHLLNEANKTLKQRLIEGYQVNALQLNQSADDM-MYGR--QQAQPPSDA 60
           MLDQL DLQ KE +L E NKTL+ RL +GYQ+  LQLN + +++  YGR          A
Sbjct: 150 MLDQLNDLQSKERMLTETNKTLRLRLADGYQM-PLQLNPNQEEVDHYGRXXXXXXXXXQA 209

Query: 61  FFHPLDCEPTLQIGYQPDPITVVTAGPSMNNFLPGWLP 96
           FF PL+CEP LQIGYQ      + AGPS+NN++ GWLP
Sbjct: 210 FFQPLECEPILQIGYQGQQ-DGMGAGPSVNNYMLGWLP 245

[Close]

BLAST of Carg05001 vs. TrEMBL
Match: tr|V9PDT1|V9PDT1_CUCME (MADS-box protein 5 OS=Cucumis melo OX=3656 GN=LOC103498850 PE=2 SV=1)

HSP 1 Score: 196.4 bits (498), Expect = 2.8e-47
Identity = 93/95 (97.89%), Postives = 94/95 (98.95%), Query Frame = 0


Query: 1   MLDQLTDLQRKEHLLNEANKTLKQRLIEGYQVNALQLNQSADDMMYGRQQAQPPSDAFFH 60
           MLDQLTDLQRKEHLLNEANKTLKQRL+EGYQVNALQLNQSADDMMYGRQQAQPP DAFFH
Sbjct: 148 MLDQLTDLQRKEHLLNEANKTLKQRLVEGYQVNALQLNQSADDMMYGRQQAQPPGDAFFH 207

Query: 61  PLDCEPTLQIGYQPDPITVVTAGPSMNNFLPGWLP 96
           PLDCEPTLQIGYQPDPITVVTAGPSMNNFLPGWLP
Sbjct: 208 PLDCEPTLQIGYQPDPITVVTAGPSMNNFLPGWLP 242

[Close]

BLAST of Carg05001 vs. TrEMBL
Match: tr|A0A0A0K9N5|A0A0A0K9N5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G095270 PE=4 SV=1)

HSP 1 Score: 196.4 bits (498), Expect = 2.8e-47
Identity = 93/95 (97.89%), Postives = 94/95 (98.95%), Query Frame = 0


Query: 1   MLDQLTDLQRKEHLLNEANKTLKQRLIEGYQVNALQLNQSADDMMYGRQQAQPPSDAFFH 60
           MLDQLTDLQRKEHLLNEANKTLKQRL+EGYQVNALQLNQSADDMMYGRQQAQPP DAFFH
Sbjct: 86  MLDQLTDLQRKEHLLNEANKTLKQRLVEGYQVNALQLNQSADDMMYGRQQAQPPGDAFFH 145

Query: 61  PLDCEPTLQIGYQPDPITVVTAGPSMNNFLPGWLP 96
           PLDCEPTLQIGYQPDPITVVTAGPSMNNFLPGWLP
Sbjct: 146 PLDCEPTLQIGYQPDPITVVTAGPSMNNFLPGWLP 180

[Close]

BLAST of Carg05001 vs. TrEMBL
Match: tr|A0A2C9UNU1|A0A2C9UNU1_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_13G009600 PE=4 SV=1)

HSP 1 Score: 169.1 bits (427), Expect = 4.8e-39
Identity = 77/95 (81.05%), Postives = 88/95 (92.63%), Query Frame = 0


Query: 1   MLDQLTDLQRKEHLLNEANKTLKQRLIEGYQVNALQLNQSADDMMYGRQQAQPPSDAFFH 60
           MLDQLTDLQRKEH+LNEANKTLKQRL+EGYQ+N++QLN SA+D+ +GRQ+AQP  D FFH
Sbjct: 148 MLDQLTDLQRKEHMLNEANKTLKQRLVEGYQINSMQLNPSAEDVGFGRQEAQPQGDGFFH 207

Query: 61  PLDCEPTLQIGYQPDPITVVTAGPSMNNFLPGWLP 96
           PLDCEPTLQIGYQ D ITVVTAGPSMNN++PGWLP
Sbjct: 208 PLDCEPTLQIGYQHDQITVVTAGPSMNNYMPGWLP 242

[Close]

BLAST of Carg05001 vs. TrEMBL
Match: tr|A0A061EBY6|A0A061EBY6_THECC (K-box region and MADS-box transcription factor family protein isoform 1 OS=Theobroma cacao OX=3641 GN=TCM_008703 PE=4 SV=1)

HSP 1 Score: 167.2 bits (422), Expect = 1.8e-38
Identity = 77/95 (81.05%), Postives = 87/95 (91.58%), Query Frame = 0


Query: 1   MLDQLTDLQRKEHLLNEANKTLKQRLIEGYQVNALQLNQSADDMMYGRQQAQPPSDAFFH 60
           MLDQLTDLQRKEHLLNEANKTLKQRL+EGYQVN+LQLN +A+D+ YGRQ AQP  D FFH
Sbjct: 148 MLDQLTDLQRKEHLLNEANKTLKQRLVEGYQVNSLQLNPNAEDVGYGRQPAQPQGDGFFH 207

Query: 61  PLDCEPTLQIGYQPDPITVVTAGPSMNNFLPGWLP 96
           PL+CEPTLQIGYQPDPI+VV AGPS+NN++ GWLP
Sbjct: 208 PLECEPTLQIGYQPDPISVVNAGPSVNNYMTGWLP 242

[Close]

BLAST of Carg05001 vs. TrEMBL
Match: tr|A0A1Q3DCK0|A0A1Q3DCK0_CEPFO (SRF-TF domain-containing protein/K-box domain-containing protein (Fragment) OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_33554 PE=4 SV=1)

HSP 1 Score: 167.2 bits (422), Expect = 1.8e-38
Identity = 78/94 (82.98%), Postives = 86/94 (91.49%), Query Frame = 0


Query: 1   MLDQLTDLQRKEHLLNEANKTLKQRLIEGYQVNALQLNQSADDMMYGRQQAQPPSDAFFH 60
           MLDQLTDLQRKEHLLNEANKTLKQRL+EGY V++LQLN SA+D+ YGRQ AQP  D FFH
Sbjct: 148 MLDQLTDLQRKEHLLNEANKTLKQRLVEGYHVSSLQLNASAEDVGYGRQAAQPQGDGFFH 207

Query: 61  PLDCEPTLQIGYQPDPITVVTAGPSMNNFLPGWL 95
           PLDCEPTLQIGYQ DPITVVTAGPS+NN++PGWL
Sbjct: 208 PLDCEPTLQIGYQTDPITVVTAGPSVNNYMPGWL 241

The following BLAST results are available for this feature:

BLAST of Carg05001 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022959858.1	1.1e-47	100.00	agamous-like MADS-box protein AGL9 homolog isoform X1 [Cucurbita moschata]	[more]
XP_022959859.1	1.1e-47	100.00	agamous-like MADS-box protein AGL9 homolog isoform X2 [Cucurbita moschata] >XP_0...	[more]
XP_023004223.1	1.1e-47	100.00	agamous-like MADS-box protein AGL9 homolog isoform X1 [Cucurbita maxima]	[more]
XP_023514992.1	1.1e-47	100.00	agamous-like MADS-box protein AGL9 homolog isoform X2 [Cucurbita pepo subsp. pep...	[more]
XP_022155454.1	3.3e-47	97.89	agamous-like MADS-box protein AGL9 homolog [Momordica charantia]	[more]

BLAST of Carg05001 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G24260.2	1.0e-18	53.06	K-box region and MADS-box transcription factor family protein	[more]
AT3G02310.1	1.7e-10	35.24	K-box region and MADS-box transcription factor family protein	[more]
AT5G15800.2	2.4e-07	30.77	K-box region and MADS-box transcription factor family protein	[more]

BLAST of Carg05001 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q03489\|AGL9_PETHY	2.2e-31	70.53	Agamous-like MADS-box protein AGL9 homolog OS=Petunia hybrida OX=4102 GN=FBP2 PE...	[more]
sp\|O65874\|MTF1_PEA	5.7e-27	66.67	MADS-box transcription factor 1 OS=Pisum sativum OX=3888 GN=MTF1 PE=2 SV=1	[more]
sp\|O04067\|AGL9_SINAL	1.4e-20	56.00	Agamous-like MADS-box protein AGL9 homolog OS=Sinapis alba OX=3728 GN=AGL9 PE=2 ...	[more]
sp\|Q38694\|AGL9_ARADE	3.4e-19	56.12	Agamous-like MADS-box protein AGL9 homolog OS=Aranda deborah OX=29714 PE=2 SV=1	[more]
sp\|O22456\|SEP3_ARATH	1.8e-17	53.06	Developmental protein SEPALLATA 3 OS=Arabidopsis thaliana OX=3702 GN=SEP3 PE=1 S...	[more]

BLAST of Carg05001 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|V9PDT1\|V9PDT1_CUCME	2.8e-47	97.89	MADS-box protein 5 OS=Cucumis melo OX=3656 GN=LOC103498850 PE=2 SV=1	[more]
tr\|A0A0A0K9N5\|A0A0A0K9N5_CUCSA	2.8e-47	97.89	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G095270 PE=4 SV=1	[more]
tr\|A0A2C9UNU1\|A0A2C9UNU1_MANES	4.8e-39	81.05	Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_13G009600 PE=4 SV=...	[more]
tr\|A0A061EBY6\|A0A061EBY6_THECC	1.8e-38	81.05	K-box region and MADS-box transcription factor family protein isoform 1 OS=Theob...	[more]
tr\|A0A1Q3DCK0\|A0A1Q3DCK0_CEPFO	1.8e-38	82.98	SRF-TF domain-containing protein/K-box domain-containing protein (Fragment) OS=C...	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg05001-RA	Carg05001-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 5..25
None	No IPR available	PANTHER	PTHR11945	MADS BOX PROTEIN	coord: 1..90
None	No IPR available	PANTHER	PTHR11945:SF351	DEVELOPMENTAL PROTEIN SEPALLATA 3	coord: 1..90

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg05001	Lsi09G017280	Bottle gourd (USVL1VR-Ls)	carlsiB070
Carg05001	Cp4.1LG01g11860	Cucurbita pepo (Zucchini)	carcpeB0127

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg05001	Silver-seed gourd	carcarB010
Carg05001	Cucumber (Gy14) v2	carcgybB0090
Carg05001	Cucumber (Gy14) v1	carcgyB0096
Carg05001	Cucurbita maxima (Rimu)	carcmaB0106
Carg05001	Cucurbita maxima (Rimu)	carcmaB0112
Carg05001	Cucurbita moschata (Rifu)	carcmoB0114
Carg05001	Cucurbita moschata (Rifu)	carcmoB0119
Carg05001	Cucurbita pepo (Zucchini)	carcpeB0125
Carg05001	Wild cucumber (PI 183967)	carcpiB0094
Carg05001	Wild cucumber (PI 183967)	carcpiB0097
Carg05001	Cucumber (Chinese Long) v2	carcuB0090
Carg05001	Cucumber (Chinese Long) v2	carcuB0093
Carg05001	Cucumber (Chinese Long) v3	carcucB0097
Carg05001	Cucumber (Chinese Long) v3	carcucB0100
Carg05001	Bottle gourd (USVL1VR-Ls)	carlsiB073
Carg05001	Melon (DHL92) v3.5.1	carmeB0082
Carg05001	Melon (DHL92) v3.6.1	carmedB0081
Carg05001	Melon (DHL92) v3.6.1	carmedB0083
Carg05001	Watermelon (Charleston Gray)	carwcgB0082
Carg05001	Watermelon (Charleston Gray)	carwcgB0083
Carg05001	Watermelon (97103) v1	carwmB0083
Carg05001	Watermelon (97103) v2	carwmbB0077
Carg05001	Watermelon (97103) v2	carwmbB0078
Carg05001	Wax gourd	carwgoB0091