Carg04852 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg04852
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	DDE_4 domain-containing protein
Location	Cucurbita_argyrosperma_scaffold_028 : 1312584 .. 1315469 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GCAAACAGAGTCGCAGAGAAACCCTGCAAGCTCAACACTCTGGACAACCCCTGCTTCCAAAATCCTTCCTTTACTCAGAACATTGCAGGCTCTACTTCTTTACCTACGGATTATACTCTGTCATTGTCTCTTCTTCAAACCCCCTTTTCACTTTCTTCTTCCATTTCCCTTAATGCACTCATTTTGACCTCAACCCTCCTCCCTTCGCCACTCACCGACGCCGTTTCTGGTTTCCGAAGCACGAGGACGTCCTCCAGAGTACTCATACCCTGTATGCTTCCTGCCCTTTATCGCTATCTCTCCCTAAAAAGATTGGTTTTGATTTCTCTGAGAATAATTTGAATTTTTAGCTTCTTCATTTGTTCTTCAACTGTATCTTGGAAAATGGGTATGTTCTTATTAGCAAAAAGTTCATTAAATTTGGGTGGTCGGTGGCTGATAACTTGACGTTCTGGGTATTTGCTGTGGTGTTCTTGTTTATTGGATACCTATCTGAGGATTTGAACCAGTTTGTGTATGTAGCAGAACGTTATCTTGGTGTTTTTAATACTCTTCATGCTCTCTTGGAGCTAGCTACGGTATGCTTCTATCTAATTCACTTCTTGTTTCTCCCTTCTTTACCAATATGGGACTTTGGTGGTGTTTTGTGGTTTCAATATTGATGGTTCCTAACTTTTGTTCAACATGTTTTTTGATTGTGATCTCCAAGCCATTGAGGGTTCCCACCATGTTTTTTTGAGGCACCAATAGGCATTAGACCTTCTGAACTGTTTCAGCTGTTCTTATTTGTCTGATAACCTTATTATTTCCTAACTTTTGTTCCACAGAATTTTTACCACTTGGGTATTTGTCATTTCTTAAAGATCTTTAAAAAAATTTAACATGAATAATTAGGAAAGAGCTTCTGAGTGCTTGTGTTTCTAATATTATGTGCCTCTCTCTCTTTTGATATCTCCTTTTCCTTTCATTTGTCAAATGTAATGGCTAGCTGATCCTTTTTATTTGAAGACAAAATCAATTAATAACATTCCCATACTTTGGCTGCAGAGTTTAAATTTACTATGGAGAGTTCTGATGATGAAAAGGATGGAAGTTATGGGAAATATGTTCCAAGAGAACCGAGTCATAATCTAGTATCTAATGGTGCAAAATTTGTAGATGAAGTACTCAATGGACAAAACGAACGTTGTTTAGAAAATTTCCGCATGGACAAGCACATATTTTATAAGTTGTGTGATATTTTGCAAGCCAAAGGCTTACTTCGTCATACGAACCGTATTAAGATCGAAGAGCAACTAGCCATATTCATGTTTATTATTGGTCACAATCTTAGGACACGAGCAGTTCAAGAGCTGTTCAGATATTCAGGAGAAACAATAAGTCGCCATTTTAACAACGTACTGAATGCGATCATGGCGATATCGTTGGACTTCTTCCAACCTCCAGGATCCAATGTTCCACCAGAAATCTTAGATGATCCAAGATTCTATCCCTACTTTAAGGTAGCATGTTGGCTTTAGTTTCACTAGTGTTTTCCTGTCCTTTGGTTTACCTTCTCATTGATTTATCTTGTTTTAGGACTGTGTGGGGGCGATTGACGGTATACACATCCCTGTCATGGTTGGCGTTGACGAGCAAGGACCCTTTCGGAATAAGAACGGACTACTTTCTCAAAATGTTTTGGCAGCATGCTCATTTGACCTGAAGTTCCATTATGTTCTAGCAGGCTGGGAAGGATCGGCTACCGATTTGCAGGTTCTGAATTCAGCACTTACGAGGCGAAACAAACTACACGTCCCTGAAGGTGCGTGTATTCTAAGAGGAAAACGATGAATCTTTTAGTTCTTGAATAGTCAGGCTATTGCTCTCTGGTCGTTTTCGGGCTAATATTTTTGAATTGCAGGTAAATACTACCTTGTGGATCAAAAATATATGAACATGCCTGGTTTTATTGCCCCTTATCACGATATCCCCTATCAGTCAAGGGAATATACTGGTGGTTATCATCCCCAAGATGCCAAAGAGCTATTTAATCTACGGCATTCGTTGCTGCGCAATGCGACCAATAGAACTTTTGGAGCTCTAAAGGTGCGCTTCCCCATACTATTGTCAGCTCCTCCTTACCCGTTACAGACACAAGTTAAGTTGGTCGTTGCGACATGTGCAATTCACAATTACATTCGGAGGGAGAATCCCGACGATTGGCTCTTTAAACTGTATGAACAAGACCATGTTGCACATATGGAGGACTCATTGCCTCAATTAGAAGCAGAACAGCTGACAGCACACATTGAGACTCCAACTGTGGACATTGCTTTTGAGACAGAAGAACTAGAGATTACATCACAGTTGAGGGATGCTATTGCAACTGAACTGTGGAGTGACTATATTAACGATATATCGCCCATGTAAATCAAATGTATGTTATCGTAGCGTCCGAGTTAGGTCAGATACTCTTCAGGAACACAAAAAATACACAAATGGGGTCTGATTTTGAAGGTGTATATTGACATTACTATGTTCATATGAAAGGAATATAACAGTGGACATTGTTTTTCTTCTTGAGTACTGCTGCCAAGGAAACAACACCAGGTTAGCGTTCTTGATGAGATCTGACTGATATTTGTTTGCATTGAGTTGAATTCTTGTTGCACATATCAATCTATTTGGCTGTTGATGCAAGGCATTGGGGATGGTTCTGAGCTATCTGAATGTGAATGTTTAATATTTGCTTCTTTTTTACTGCTACATTCATCCGGCTTCCACCTGAAAGTACCCCAAACTTCCCTACCTCGCGTAGCTCGCTTTTGATCTGCTGACAATGTGTGTATGTGGTGGTGCCCCTCTTGTATGGAGTGTACCCGTGCTAGCCAATAGATATTGTCC

mRNA sequence

GCAAACAGAGTCGCAGAGAAACCCTGCAAGCTCAACACTCTGGACAACCCCTGCTTCCAAAATCCTTCCTTTACTCAGAACATTGCAGGCTCTACTTCTTTACCTACGGATTATACTCTGTCATTGTCTCTTCTTCAAACCCCCTTTTCACTTTCTTCTTCCATTTCCCTTAATGCACTCATTTTGACCTCAACCCTCCTCCCTTCGCCACTCACCGACGCCGTTTCTGGTTTCCGAAGCACGAGGACGTCCTCCAGAGTACTCATACCCTAGTTTAAATTTACTATGGAGAGTTCTGATGATGAAAAGGATGGAAGTTATGGGAAATATGTTCCAAGAGAACCGAGTCATAATCTAGTATCTAATGGTGCAAAATTTGTAGATGAAGTACTCAATGGACAAAACGAACGTTGTTTAGAAAATTTCCGCATGGACAAGCACATATTTTATAAGTTGTGTGATATTTTGCAAGCCAAAGGCTTACTTCGTCATACGAACCGTATTAAGATCGAAGAGCAACTAGCCATATTCATGTTTATTATTGGTCACAATCTTAGGACACGAGCAGTTCAAGAGCTGTTCAGATATTCAGGAGAAACAATAAGTCGCCATTTTAACAACGTACTGAATGCGATCATGGCGATATCGTTGGACTTCTTCCAACCTCCAGGATCCAATGTTCCACCAGAAATCTTAGATGATCCAAGATTCTATCCCTACTTTAAGGACTGTGTGGGGGCGATTGACGGTATACACATCCCTGTCATGGTTGGCGTTGACGAGCAAGGACCCTTTCGGAATAAGAACGGACTACTTTCTCAAAATGTTTTGGCAGCATGCTCATTTGACCTGAAGTTCCATTATGTTCTAGCAGGCTGGGAAGGATCGGCTACCGATTTGCAGGTTCTGAATTCAGCACTTACGAGGCGAAACAAACTACACGTCCCTGAAGGTAAATACTACCTTGTGGATCAAAAATATATGAACATGCCTGGTTTTATTGCCCCTTATCACGATATCCCCTATCAGTCAAGGGAATATACTGGTGGTTATCATCCCCAAGATGCCAAAGAGCTATTTAATCTACGGCATTCGTTGCTGCGCAATGCGACCAATAGAACTTTTGGAGCTCTAAAGGTGCGCTTCCCCATACTATTGTCAGCTCCTCCTTACCCGTTACAGACACAAGTTAAGTTGGTCGTTGCGACATGTGCAATTCACAATTACATTCGGAGGGAGAATCCCGACGATTGGCTCTTTAAACTGTATGAACAAGACCATGTTGCACATATGGAGGACTCATTGCCTCAATTAGAAGCAGAACAGCTGACAGCACACATTGAGACTCCAACTGTGGACATTGCTTTTGAGACAGAAGAACTAGAGATTACATCACAGTTGAGGGATGCTATTGCAACTGAACTGTGGAGTGACTATATTAACGATATATCGCCCATGTAAATCAAATGTATGTTATCGTAGCGTCCGAGTTAGGTCAGATACTCTTCAGGAACACAAAAAATACACAAATGGGGTCTGATTTTGAAGGTGTATATTGACATTACTATGTTCATATGAAAGGAATATAACAGTGGACATTGTTTTTCTTCTTGAGTACTGCTGCCAAGGAAACAACACCAGGTTAGCGTTCTTGATGAGATCTGACTGATATTTGTTTGCATTGAGTTGAATTCTTGTTGCACATATCAATCTATTTGGCTGTTGATGCAAGGCATTGGGGATGGTTCTGAGCTATCTGAATGTGAATGTTTAATATTTGCTTCTTTTTTACTGCTACATTCATCCGGCTTCCACCTGAAAGTACCCCAAACTTCCCTACCTCGCGTAGCTCGCTTTTGATCTGCTGACAATGTGTGTATGTGGTGGTGCCCCTCTTGTATGGAGTGTACCCGTGCTAGCCAATAGATATTGTCC

Coding sequence (CDS)

ATGGAGAGTTCTGATGATGAAAAGGATGGAAGTTATGGGAAATATGTTCCAAGAGAACCGAGTCATAATCTAGTATCTAATGGTGCAAAATTTGTAGATGAAGTACTCAATGGACAAAACGAACGTTGTTTAGAAAATTTCCGCATGGACAAGCACATATTTTATAAGTTGTGTGATATTTTGCAAGCCAAAGGCTTACTTCGTCATACGAACCGTATTAAGATCGAAGAGCAACTAGCCATATTCATGTTTATTATTGGTCACAATCTTAGGACACGAGCAGTTCAAGAGCTGTTCAGATATTCAGGAGAAACAATAAGTCGCCATTTTAACAACGTACTGAATGCGATCATGGCGATATCGTTGGACTTCTTCCAACCTCCAGGATCCAATGTTCCACCAGAAATCTTAGATGATCCAAGATTCTATCCCTACTTTAAGGACTGTGTGGGGGCGATTGACGGTATACACATCCCTGTCATGGTTGGCGTTGACGAGCAAGGACCCTTTCGGAATAAGAACGGACTACTTTCTCAAAATGTTTTGGCAGCATGCTCATTTGACCTGAAGTTCCATTATGTTCTAGCAGGCTGGGAAGGATCGGCTACCGATTTGCAGGTTCTGAATTCAGCACTTACGAGGCGAAACAAACTACACGTCCCTGAAGGTAAATACTACCTTGTGGATCAAAAATATATGAACATGCCTGGTTTTATTGCCCCTTATCACGATATCCCCTATCAGTCAAGGGAATATACTGGTGGTTATCATCCCCAAGATGCCAAAGAGCTATTTAATCTACGGCATTCGTTGCTGCGCAATGCGACCAATAGAACTTTTGGAGCTCTAAAGGTGCGCTTCCCCATACTATTGTCAGCTCCTCCTTACCCGTTACAGACACAAGTTAAGTTGGTCGTTGCGACATGTGCAATTCACAATTACATTCGGAGGGAGAATCCCGACGATTGGCTCTTTAAACTGTATGAACAAGACCATGTTGCACATATGGAGGACTCATTGCCTCAATTAGAAGCAGAACAGCTGACAGCACACATTGAGACTCCAACTGTGGACATTGCTTTTGAGACAGAAGAACTAGAGATTACATCACAGTTGAGGGATGCTATTGCAACTGAACTGTGGAGTGACTATATTAACGATATATCGCCCATGTAA

Protein sequence

MESSDDEKDGSYGKYVPREPSHNLVSNGAKFVDEVLNGQNERCLENFRMDKHIFYKLCDILQAKGLLRHTNRIKIEEQLAIFMFIIGHNLRTRAVQELFRYSGETISRHFNNVLNAIMAISLDFFQPPGSNVPPEILDDPRFYPYFKDCVGAIDGIHIPVMVGVDEQGPFRNKNGLLSQNVLAACSFDLKFHYVLAGWEGSATDLQVLNSALTRRNKLHVPEGKYYLVDQKYMNMPGFIAPYHDIPYQSREYTGGYHPQDAKELFNLRHSLLRNATNRTFGALKVRFPILLSAPPYPLQTQVKLVVATCAIHNYIRRENPDDWLFKLYEQDHVAHMEDSLPQLEAEQLTAHIETPTVDIAFETEELEITSQLRDAIATELWSDYINDISPM

Homology

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BLAST of Carg04852 vs. NCBI nr
Match: XP_022924205.1 (putative nuclease HARBI1 isoform X2 [Cucurbita moschata] >XP_022924206.1 putative nuclease HARBI1 isoform X2 [Cucurbita moschata])

HSP 1 Score: 801.6 bits (2069), Expect = 1.2e-228
Identity = 388/391 (99.23%), Postives = 391/391 (100.00%), Query Frame = 0


Query: 1   MESSDDEKDGSYGKYVPREPSHNLVSNGAKFVDEVLNGQNERCLENFRMDKHIFYKLCDI 60
           MESSDDEKDGSYGKYVPREPSHNLV+NGAKFVDEVLNGQNERCLENFRMDKHIFYKLCDI
Sbjct: 1   MESSDDEKDGSYGKYVPREPSHNLVTNGAKFVDEVLNGQNERCLENFRMDKHIFYKLCDI 60

Query: 61  LQAKGLLRHTNRIKIEEQLAIFMFIIGHNLRTRAVQELFRYSGETISRHFNNVLNAIMAI 120
           LQAKGLLRHTNRIKIEEQLAIFMFIIGHNLRTRAVQELFRYSGETISRHFNNVLNAIMAI
Sbjct: 61  LQAKGLLRHTNRIKIEEQLAIFMFIIGHNLRTRAVQELFRYSGETISRHFNNVLNAIMAI 120

Query: 121 SLDFFQPPGSNVPPEILDDPRFYPYFKDCVGAIDGIHIPVMVGVDEQGPFRNKNGLLSQN 180
           SLDFFQPPGSNVPPEILDDPRFYPYFKDCVGAIDGIHIPVMVGVDEQGPFRNKNGLLSQN
Sbjct: 121 SLDFFQPPGSNVPPEILDDPRFYPYFKDCVGAIDGIHIPVMVGVDEQGPFRNKNGLLSQN 180

Query: 181 VLAACSFDLKFHYVLAGWEGSATDLQVLNSALTRRNKLHVPEGKYYLVDQKYMNMPGFIA 240
           VLAACSFDLKFHYVLAGWEGSATDLQVLNSALTRRNKLHVPEGKYYLVDQKYMNMPGFIA
Sbjct: 181 VLAACSFDLKFHYVLAGWEGSATDLQVLNSALTRRNKLHVPEGKYYLVDQKYMNMPGFIA 240

Query: 241 PYHDIPYQSREYTGGYHPQDAKELFNLRHSLLRNATNRTFGALKVRFPILLSAPPYPLQT 300
           PYHDIPYQSREYTGGYHPQDAKELFNLRHSLLRNAT+RTFGALKVRFPILLSAPPYPLQT
Sbjct: 241 PYHDIPYQSREYTGGYHPQDAKELFNLRHSLLRNATDRTFGALKVRFPILLSAPPYPLQT 300

Query: 301 QVKLVVATCAIHNYIRRENPDDWLFKLYEQDHVAHMEDSLPQLEAEQLTAHIETPTVDIA 360
           QVKLVVATCAIHNYIRRENPDDWLFKLYEQDHV+HMEDSLPQLEAEQLTAHIETPTVDIA
Sbjct: 301 QVKLVVATCAIHNYIRRENPDDWLFKLYEQDHVSHMEDSLPQLEAEQLTAHIETPTVDIA 360

Query: 361 FETEELEITSQLRDAIATELWSDYINDISPM 392
           FETEELEITSQLRDAIATELWSDYINDISPM
Sbjct: 361 FETEELEITSQLRDAIATELWSDYINDISPM 391

[Close]

BLAST of Carg04852 vs. NCBI nr
Match: XP_023520117.1 (putative nuclease HARBI1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 800.4 bits (2066), Expect = 2.7e-228
Identity = 387/391 (98.98%), Postives = 391/391 (100.00%), Query Frame = 0


Query: 1   MESSDDEKDGSYGKYVPREPSHNLVSNGAKFVDEVLNGQNERCLENFRMDKHIFYKLCDI 60
           MESSDDEKDGSYGKYVPREPSHNLV+NGAKFVDEVLNGQNERCLENFRMDKHIFYKLCDI
Sbjct: 1   MESSDDEKDGSYGKYVPREPSHNLVTNGAKFVDEVLNGQNERCLENFRMDKHIFYKLCDI 60

Query: 61  LQAKGLLRHTNRIKIEEQLAIFMFIIGHNLRTRAVQELFRYSGETISRHFNNVLNAIMAI 120
           LQAKGLLRHTNRIKIEEQLAIFMFIIGHNLRTRAVQELFRYSGETISRHFNNVLNAIMAI
Sbjct: 61  LQAKGLLRHTNRIKIEEQLAIFMFIIGHNLRTRAVQELFRYSGETISRHFNNVLNAIMAI 120

Query: 121 SLDFFQPPGSNVPPEILDDPRFYPYFKDCVGAIDGIHIPVMVGVDEQGPFRNKNGLLSQN 180
           SLDFFQPPGSNVPPEILDDPRFYPYFKDCVGAIDGIHIPVMVGVDEQGPFRNKNGLLSQN
Sbjct: 121 SLDFFQPPGSNVPPEILDDPRFYPYFKDCVGAIDGIHIPVMVGVDEQGPFRNKNGLLSQN 180

Query: 181 VLAACSFDLKFHYVLAGWEGSATDLQVLNSALTRRNKLHVPEGKYYLVDQKYMNMPGFIA 240
           VLAACSFDLKFHYVLAGWEGSATDLQVLNSALTRRNKLHVPEGKYYLVDQKYMNMPGFIA
Sbjct: 181 VLAACSFDLKFHYVLAGWEGSATDLQVLNSALTRRNKLHVPEGKYYLVDQKYMNMPGFIA 240

Query: 241 PYHDIPYQSREYTGGYHPQDAKELFNLRHSLLRNATNRTFGALKVRFPILLSAPPYPLQT 300
           PYHDIPYQSREYTGGYHPQDAKELFNLRHSLLRNAT+RTFGA+KVRFPILLSAPPYPLQT
Sbjct: 241 PYHDIPYQSREYTGGYHPQDAKELFNLRHSLLRNATDRTFGAVKVRFPILLSAPPYPLQT 300

Query: 301 QVKLVVATCAIHNYIRRENPDDWLFKLYEQDHVAHMEDSLPQLEAEQLTAHIETPTVDIA 360
           QVKLVVATCAIHNYIRRENPDDWLFKLYEQDHV+HMEDSLPQLEAEQLTAHIETPTVDIA
Sbjct: 301 QVKLVVATCAIHNYIRRENPDDWLFKLYEQDHVSHMEDSLPQLEAEQLTAHIETPTVDIA 360

Query: 361 FETEELEITSQLRDAIATELWSDYINDISPM 392
           FETEELEITSQLRDAIATELWSDYINDISPM
Sbjct: 361 FETEELEITSQLRDAIATELWSDYINDISPM 391

[Close]

BLAST of Carg04852 vs. NCBI nr
Match: XP_023001791.1 (putative nuclease HARBI1 [Cucurbita maxima])

HSP 1 Score: 793.9 bits (2049), Expect = 2.5e-226
Identity = 385/391 (98.47%), Postives = 389/391 (99.49%), Query Frame = 0


Query: 1   MESSDDEKDGSYGKYVPREPSHNLVSNGAKFVDEVLNGQNERCLENFRMDKHIFYKLCDI 60
           MESSDDEKDGSYGKYVPREPSHNLVSNGAKFVDEVLNGQNERCLENFRMDKHIFYKLCDI
Sbjct: 1   MESSDDEKDGSYGKYVPREPSHNLVSNGAKFVDEVLNGQNERCLENFRMDKHIFYKLCDI 60

Query: 61  LQAKGLLRHTNRIKIEEQLAIFMFIIGHNLRTRAVQELFRYSGETISRHFNNVLNAIMAI 120
           LQAKGLLRHTNRIKIEEQLAIFMFIIGHNLRTRAVQELFRYSGETISRHFNNVLNAIMAI
Sbjct: 61  LQAKGLLRHTNRIKIEEQLAIFMFIIGHNLRTRAVQELFRYSGETISRHFNNVLNAIMAI 120

Query: 121 SLDFFQPPGSNVPPEILDDPRFYPYFKDCVGAIDGIHIPVMVGVDEQGPFRNKNGLLSQN 180
           SLDFFQPPGSNVPPEILDDPRFYPYFKDCVGAIDGIHIPVMVGVDEQGPFRNKNGLLSQN
Sbjct: 121 SLDFFQPPGSNVPPEILDDPRFYPYFKDCVGAIDGIHIPVMVGVDEQGPFRNKNGLLSQN 180

Query: 181 VLAACSFDLKFHYVLAGWEGSATDLQVLNSALTRRNKLHVPEGKYYLVDQKYMNMPGFIA 240
           VLAACSFDLKFHYVLAGWEGSATDLQVLNSALTRRNKLH+PEGKYYLVDQKYMNMPGFIA
Sbjct: 181 VLAACSFDLKFHYVLAGWEGSATDLQVLNSALTRRNKLHIPEGKYYLVDQKYMNMPGFIA 240

Query: 241 PYHDIPYQSREYTGGYHPQDAKELFNLRHSLLRNATNRTFGALKVRFPILLSAPPYPLQT 300
           PYHDIPYQSREYTGGYHPQDAKELFNLRHSLLRNAT+RTFGALKVRFPILLSAPPYPLQT
Sbjct: 241 PYHDIPYQSREYTGGYHPQDAKELFNLRHSLLRNATDRTFGALKVRFPILLSAPPYPLQT 300

Query: 301 QVKLVVATCAIHNYIRRENPDDWLFKLYEQDHVAHMEDSLPQLEAEQLTAHIETPTVDIA 360
           QVKLVVATCAIHNYIRRENPDD LF+LYEQDHV+HMEDSLPQLEAEQLTAHIETPTVDIA
Sbjct: 301 QVKLVVATCAIHNYIRRENPDDCLFRLYEQDHVSHMEDSLPQLEAEQLTAHIETPTVDIA 360

Query: 361 FETEELEITSQLRDAIATELWSDYINDISPM 392
           FETEE EITSQLRDAIATELWSDYINDISPM
Sbjct: 361 FETEEREITSQLRDAIATELWSDYINDISPM 391

[Close]

BLAST of Carg04852 vs. NCBI nr
Match: XP_004137507.1 (PREDICTED: putative nuclease HARBI1 [Cucumis sativus])

HSP 1 Score: 758.4 bits (1957), Expect = 1.2e-215
Identity = 366/392 (93.37%), Postives = 379/392 (96.68%), Query Frame = 0


Query: 1   MESSDDEKDGSYGKYVPREPSHNLVSNGAKFVDEVLNGQNERCLENFRMDKHIFYKLCDI 60
           MESSDDEKDG+YGKYVPREPSHNLVSNGAKFVDEVLNGQNERCL++FRMDKH+FYKLCDI
Sbjct: 1   MESSDDEKDGTYGKYVPREPSHNLVSNGAKFVDEVLNGQNERCLDHFRMDKHVFYKLCDI 60

Query: 61  LQAKGLLRHTNRIKIEEQLAIFMFIIGHNLRTRAVQELFRYSGETISRHFNNVLNAIMAI 120
           LQAKGLLRHTNRIKIEEQLAIFMFIIGHNLRTRAVQELFRYSGETISRHFNNVLNAIMAI
Sbjct: 61  LQAKGLLRHTNRIKIEEQLAIFMFIIGHNLRTRAVQELFRYSGETISRHFNNVLNAIMAI 120

Query: 121 SLDFFQPPGSNV-PPEILDDPRFYPYFKDCVGAIDGIHIPVMVGVDEQGPFRNKNGLLSQ 180
           SLDFFQPPGSNV PPEIL+DPRFYPYFKDCVG IDGIHIPVMVGVDEQGPFRNKNG LSQ
Sbjct: 121 SLDFFQPPGSNVPPPEILEDPRFYPYFKDCVGVIDGIHIPVMVGVDEQGPFRNKNGQLSQ 180

Query: 181 NVLAACSFDLKFHYVLAGWEGSATDLQVLNSALTRRNKLHVPEGKYYLVDQKYMNMPGFI 240
            VLAACSFDLKFHYVLAGWEGSA+DLQVLNSALTRRNKLHVPEGKYYLVDQKYMNMPGF+
Sbjct: 181 IVLAACSFDLKFHYVLAGWEGSASDLQVLNSALTRRNKLHVPEGKYYLVDQKYMNMPGFV 240

Query: 241 APYHDIPYQSREYTGGYHPQDAKELFNLRHSLLRNATNRTFGALKVRFPILLSAPPYPLQ 300
           APYHDI YQS+EY GGYHPQDAKELFNLRHSLLRNAT RTF ALK RFPILLSAPPYPLQ
Sbjct: 241 APYHDITYQSKEYPGGYHPQDAKELFNLRHSLLRNATERTFEALKARFPILLSAPPYPLQ 300

Query: 301 TQVKLVVATCAIHNYIRRENPDDWLFKLYEQDHVAHMEDSLPQLEAEQLTAHIETPTVDI 360
           TQVKLVVATCAIHNYIRRENPDDW F+LYEQDHV HMEDSLPQLEAEQLTA+IETP VD+
Sbjct: 301 TQVKLVVATCAIHNYIRRENPDDWFFRLYEQDHVPHMEDSLPQLEAEQLTANIETPIVDV 360

Query: 361 AFETEELEITSQLRDAIATELWSDYINDISPM 392
           AFETEELEITSQLRD+IA E+WSDYINDISPM
Sbjct: 361 AFETEELEITSQLRDSIAAEIWSDYINDISPM 392

[Close]

BLAST of Carg04852 vs. NCBI nr
Match: XP_016899554.1 (PREDICTED: uncharacterized protein LOC103502878 [Cucumis melo])

HSP 1 Score: 758.1 bits (1956), Expect = 1.5e-215
Identity = 366/392 (93.37%), Postives = 378/392 (96.43%), Query Frame = 0


Query: 1   MESSDDEKDGSYGKYVPREPSHNLVSNGAKFVDEVLNGQNERCLENFRMDKHIFYKLCDI 60
           MESSDDEKDG+YGKYVPREPSHNLVSNGAKFVDEVLNGQNERCLE+FRMDKH+FYKLCDI
Sbjct: 1   MESSDDEKDGTYGKYVPREPSHNLVSNGAKFVDEVLNGQNERCLEHFRMDKHVFYKLCDI 60

Query: 61  LQAKGLLRHTNRIKIEEQLAIFMFIIGHNLRTRAVQELFRYSGETISRHFNNVLNAIMAI 120
           LQAKGLLRHTNRIKIEEQLAIFMFIIGHNLRTRAVQELFRYSGETISRHFNNVLNAIMAI
Sbjct: 61  LQAKGLLRHTNRIKIEEQLAIFMFIIGHNLRTRAVQELFRYSGETISRHFNNVLNAIMAI 120

Query: 121 SLDFFQPPGSNV-PPEILDDPRFYPYFKDCVGAIDGIHIPVMVGVDEQGPFRNKNGLLSQ 180
           SLDFFQPPGSNV PPEIL+DPRFYPYFKDCVGAIDGIHIPVMVGVDEQGPFRN NG LSQ
Sbjct: 121 SLDFFQPPGSNVPPPEILEDPRFYPYFKDCVGAIDGIHIPVMVGVDEQGPFRNTNGQLSQ 180

Query: 181 NVLAACSFDLKFHYVLAGWEGSATDLQVLNSALTRRNKLHVPEGKYYLVDQKYMNMPGFI 240
            VLAACSFDLKFHYVLAGWEGSA+DLQVLNSALTRRNKLHVPEGKYYLVDQKYMNMPGF+
Sbjct: 181 IVLAACSFDLKFHYVLAGWEGSASDLQVLNSALTRRNKLHVPEGKYYLVDQKYMNMPGFV 240

Query: 241 APYHDIPYQSREYTGGYHPQDAKELFNLRHSLLRNATNRTFGALKVRFPILLSAPPYPLQ 300
           APYHDI Y S+EY GGYHPQDAKELFNLRHSLLRNAT RTFGALK RFPILLSAPPYPLQ
Sbjct: 241 APYHDITYHSKEYPGGYHPQDAKELFNLRHSLLRNATERTFGALKARFPILLSAPPYPLQ 300

Query: 301 TQVKLVVATCAIHNYIRRENPDDWLFKLYEQDHVAHMEDSLPQLEAEQLTAHIETPTVDI 360
           TQVKLVVATCAIHNYIRRENPDDW F+LYEQDHV HMEDSLPQLEAEQLTA+IETP VD+
Sbjct: 301 TQVKLVVATCAIHNYIRRENPDDWFFRLYEQDHVPHMEDSLPQLEAEQLTANIETPIVDV 360

Query: 361 AFETEELEITSQLRDAIATELWSDYINDISPM 392
           AFETEELEI SQLRD+IA E+WSDYINDISPM
Sbjct: 361 AFETEELEIASQLRDSIAAEIWSDYINDISPM 392

[Close]

BLAST of Carg04852 vs. TAIR10
Match: AT5G41980.1 (Putative harbinger transposase-derived nuclease (InterPro:IPR006912))

HSP 1 Score: 487.3 bits (1253), Expect = 9.1e-138
Identity = 249/384 (64.84%), Postives = 296/384 (77.08%), Query Frame = 0


Query: 7   EKDGSYGKYVPREPSHNLVSNGAKFVDEVLNGQNERCLENFRMDKHIFYKLCDILQAKGL 66
           E+D      +P+E S   +S+G KFV ++LNG NE+C ENFRMDK +FYKLCD+LQ +GL
Sbjct: 6   EEDKEEAVTLPKEVSKISISDGNKFVYQILNGPNEQCFENFRMDKPVFYKLCDLLQTRGL 65

Query: 67  LRHTNRIKIEEQLAIFMFIIGHNLRTRAVQELFRYSGETISRHFNNVLNAIMAISLDFFQ 126
           LRHTNRIKIE QLAIF+FIIGHNLRTRAVQELF YSGETISRHFNNVLNA++AIS DFFQ
Sbjct: 66  LRHTNRIKIEAQLAIFLFIIGHNLRTRAVQELFCYSGETISRHFNNVLNAVIAISKDFFQ 125

Query: 127 PPGSNVPPEILDDPRFYPYFKDCVGAIDGIHIPVMVGVDEQGPFRNKNGLLSQNVLAACS 186
            P SN      DD    PYFKDCVG +D  HIPVMVGVDEQGPFRN NGLL+QNVLAA S
Sbjct: 126 -PNSNSDTLENDD----PYFKDCVGVVDSFHIPVMVGVDEQGPFRNGNGLLTQNVLAASS 185

Query: 187 FDLKFHYVLAGWEGSATDLQVLNSALTRRNKLHVPEGKYYLVDQKYMNMPGFIAPYHDIP 246
           FDL+F+YVLAGWEGSA+D QVLN+ALTRRNKL VP+GKYY+VD KY N+PGFIAPYH + 
Sbjct: 186 FDLRFNYVLAGWEGSASDQQVLNAALTRRNKLQVPQGKYYIVDNKYPNLPGFIAPYHGVS 245

Query: 247 YQSREYTGGYHPQDAKELFNLRHSLLRNATNRTFGALKVRFPILLSAPPYPLQTQVKLVV 306
             SRE        +AKE+FN RH LL  A +RTFGALK RFPILLSAPPYPLQTQVKLV+
Sbjct: 246 TNSRE--------EAKEMFNERHKLLHRAIHRTFGALKERFPILLSAPPYPLQTQVKLVI 305

Query: 307 ATCAIHNYIRRENPDDWLFKLYEQDHVAHM-EDSLPQLEAEQLTAHIETPTVDIAFETEE 366
           A CA+HNY+R E PDD +F+++E++ +A   ED    LE EQ    +E    +  F  EE
Sbjct: 306 AACALHNYVRLEKPDDLVFRMFEEETLAEAGEDREVALEEEQ----VEIVGQEHGFRPEE 365

Query: 367 LEITSQLRDAIATELWSDYINDIS 390
           +E + +LRD IA+ELW+ Y+ ++S
Sbjct: 366 VEDSLRLRDEIASELWNHYVQNMS 372

[Close]

BLAST of Carg04852 vs. TAIR10
Match: AT1G43722.1 (unknown protein)

HSP 1 Score: 154.8 bits (390), Expect = 1.1e-37
Identity = 96/279 (34.41%), Postives = 136/279 (48.75%), Query Frame = 0


Query: 12  YGKYVPREPSHNLVSNGAKFVDEVLNGQNERCLENFRMDKHIFYKLCDILQAKGLLRHTN 71
           Y +Y  R P       G + +   L      CL+  RM    F  LC++LQ    L+ T 
Sbjct: 35  YDRYFQRAPVQIDRGLGWRNIWRRLQQDAAACLQLLRMSLPCFTTLCNMLQTNYDLQPTL 94

Query: 72  RIKIEEQLAIFMFIIGHNLRTRAVQELFRYSGETISRHFNNVLNAIMAISLDFFQPPGS- 131
            I IEE +A+F+ I GHN   R V   F  + ET+ R F  VL A   ++ D+ + P   
Sbjct: 95  NISIEESVAMFLRICGHNEVYRDVGLRFGRNQETVQRKFREVLTATELLACDYIRTPTRQ 154

Query: 132 ---NVPPEILDDPRFYPYFKDCVGAIDGIHIPVMVGVDEQGPFRNKNGLLSQNVLAACSF 191
               +P  +  D R++PYF   VGA+DG H+ V V  D QG + N++   S N++A C  
Sbjct: 155 ELYRIPERLQVDQRYWPYFSGFVGAMDGTHVCVKVKPDLQGMYWNRHDNASLNIMAICDL 214

Query: 192 DLKFHYVLAGWEGSATDLQVLNSALTRRNKLHVPEG-KYYLVDQKYMNMPGFIAPYHD-- 251
            + F Y+  G  GS  D  VL  A    ++  +P   KYYLVD  Y N  G +APY    
Sbjct: 215 KMLFTYIWNGAPGSCYDTAVLQIAQQSDSEFPLPPSEKYYLVDSGYPNKQGLLAPYRSSR 274

Query: 252 ---IPYQSREYTGGYHPQDAKELFNLRHSLLRNATNRTF 281
              + Y   ++  G  P++  ELFN  H+ LR+   RTF
Sbjct: 275 NRVVRYHMSQFYYGPRPRNKHELFNQCHTSLRSVIERTF 313

[Close]

BLAST of Carg04852 vs. TAIR10
Match: AT5G28950.1 (unknown protein)

HSP 1 Score: 117.1 bits (292), Expect = 2.5e-26
Identity = 57/96 (59.38%), Postives = 69/96 (71.88%), Query Frame = 0


Query: 128 PGSNVPPEILDDPRFYPYFKDCVGAIDGIHIPVMVGVDEQGPFRNKNGLLSQNVLAACSF 187
           P   VP +I +  R YPYFKDCVGAID  HI  MV   +   FRN+ G +SQN+LAAC+F
Sbjct: 4   PEIAVPRKIRESTRLYPYFKDCVGAIDDTHIFAMVSQKKMPSFRNRKGDISQNMLAACNF 63

Query: 188 DLKFHYVLAGWEGSATDLQVLNSALTRR-NKLHVPE 223
           D++F YVL+GWEGSA D +VLN ALTR  N+L VPE
Sbjct: 64  DVEFMYVLSGWEGSAHDSKVLNDALTRNSNRLPVPE 99

[Close]

BLAST of Carg04852 vs. TAIR10
Match: AT5G35695.1 (Putative harbinger transposase-derived nuclease (InterPro:IPR006912))

HSP 1 Score: 110.2 bits (274), Expect = 3.0e-24
Identity = 70/197 (35.53%), Postives = 100/197 (50.76%), Query Frame = 0


Query: 191 FHYVLAGWEGSATDLQVLNSALTRRNKLHVPEGKYYLVDQKYMNMPGFIAPYHDIPYQSR 250
           F YVL+GWEGSA D +VL+ AL           K+YLVD  + N   F+AP+  + Y  +
Sbjct: 25  FIYVLSGWEGSAHDSRVLSDALR----------KFYLVDCGFANRLNFLAPFRGVRYHLQ 84

Query: 251 EYTGGYH-PQDAKELFNLRHSLLRNATNRTFGALKVRFPILLSAPPYPLQTQVKLVVATC 310
           E+ G    P+   ELFNLRH  LRN   R FG  K RF I  SAPP+  + Q  LV+   
Sbjct: 85  EFAGQRRDPETPHELFNLRHVSLRNVIERIFGIFKSRFAIFKSAPPFSYKKQAGLVLTCA 144

Query: 311 AIHNYIRRENPDDWLFKLYEQDHVAHMEDSLPQLEAEQLTAHIETPTVDIAFETEELEIT 370
           A+HN++R+E   D   +    D V +  D          T  I+     +  + ++ E T
Sbjct: 145 ALHNFLRKECRSD---EADFPDEVGNEGDVXXXXXXXMNTNEIDNEE-PLEAQKQDRENT 204

Query: 371 SQLRDAIATELWSDYIN 387
           +  R ++A ++W D  N
Sbjct: 205 NMWRKSMAEDMWKDATN 207

[Close]

BLAST of Carg04852 vs. TAIR10
Match: AT5G28730.1 (unknown protein)

HSP 1 Score: 110.2 bits (274), Expect = 3.0e-24
Identity = 65/205 (31.71%), Postives = 101/205 (49.27%), Query Frame = 0


Query: 43  CLENFRMDKHIFYKLCDILQAKGLLRHTNRIKIEEQLAIFMFIIGHNLRTRAVQELFRYS 102
           C    RM    F +LC+IL  K  L+ +  I ++E +AIF+ I   N   R +   F ++
Sbjct: 24  CQTLIRMSSEAFTQLCEILHGKYGLQSSTNISLDESVAIFLIICASNDTQRDIALRFGHA 83

Query: 103 GETISRHFNNVLNAIMAISLDFFQPPGSN----VPPEILDDPRFYPYFKDCVGAIDGIHI 162
            ETI R F++VL A+  +++++ +P        +   + DD R++P+  D +        
Sbjct: 84  QETIWRKFHDVLKAMERLAVEYIRPRKVEELRAISNRLQDDTRYWPFLMDLL-------- 143

Query: 163 PVMVGVDEQGPFRNKNGLLSQNVLAACSFDLKFHYVLAGWEGSATDLQVLNSALTRRNKL 222
                           G+ S NVLA C  D+ F Y   G  GS  D +VL++A++     
Sbjct: 144 ----------------GIASFNVLAICDLDMLFTYCFVGMAGSTHDARVLSAAISDDPLF 203

Query: 223 HV-PEGKYYLVDQKYMNMPGFIAPY 243
           HV P+ KYYLVD  Y N  G++APY
Sbjct: 204 HVPPDSKYYLVDSGYANKRGYLAPY 204

[Close]

BLAST of Carg04852 vs. TrEMBL
Match: tr|A0A1S4DU98|A0A1S4DU98_CUCME (uncharacterized protein LOC103502878 OS=Cucumis melo OX=3656 GN=LOC103502878 PE=4 SV=1)

HSP 1 Score: 758.1 bits (1956), Expect = 1.0e-215
Identity = 366/392 (93.37%), Postives = 378/392 (96.43%), Query Frame = 0


Query: 1   MESSDDEKDGSYGKYVPREPSHNLVSNGAKFVDEVLNGQNERCLENFRMDKHIFYKLCDI 60
           MESSDDEKDG+YGKYVPREPSHNLVSNGAKFVDEVLNGQNERCLE+FRMDKH+FYKLCDI
Sbjct: 1   MESSDDEKDGTYGKYVPREPSHNLVSNGAKFVDEVLNGQNERCLEHFRMDKHVFYKLCDI 60

Query: 61  LQAKGLLRHTNRIKIEEQLAIFMFIIGHNLRTRAVQELFRYSGETISRHFNNVLNAIMAI 120
           LQAKGLLRHTNRIKIEEQLAIFMFIIGHNLRTRAVQELFRYSGETISRHFNNVLNAIMAI
Sbjct: 61  LQAKGLLRHTNRIKIEEQLAIFMFIIGHNLRTRAVQELFRYSGETISRHFNNVLNAIMAI 120

Query: 121 SLDFFQPPGSNV-PPEILDDPRFYPYFKDCVGAIDGIHIPVMVGVDEQGPFRNKNGLLSQ 180
           SLDFFQPPGSNV PPEIL+DPRFYPYFKDCVGAIDGIHIPVMVGVDEQGPFRN NG LSQ
Sbjct: 121 SLDFFQPPGSNVPPPEILEDPRFYPYFKDCVGAIDGIHIPVMVGVDEQGPFRNTNGQLSQ 180

Query: 181 NVLAACSFDLKFHYVLAGWEGSATDLQVLNSALTRRNKLHVPEGKYYLVDQKYMNMPGFI 240
            VLAACSFDLKFHYVLAGWEGSA+DLQVLNSALTRRNKLHVPEGKYYLVDQKYMNMPGF+
Sbjct: 181 IVLAACSFDLKFHYVLAGWEGSASDLQVLNSALTRRNKLHVPEGKYYLVDQKYMNMPGFV 240

Query: 241 APYHDIPYQSREYTGGYHPQDAKELFNLRHSLLRNATNRTFGALKVRFPILLSAPPYPLQ 300
           APYHDI Y S+EY GGYHPQDAKELFNLRHSLLRNAT RTFGALK RFPILLSAPPYPLQ
Sbjct: 241 APYHDITYHSKEYPGGYHPQDAKELFNLRHSLLRNATERTFGALKARFPILLSAPPYPLQ 300

Query: 301 TQVKLVVATCAIHNYIRRENPDDWLFKLYEQDHVAHMEDSLPQLEAEQLTAHIETPTVDI 360
           TQVKLVVATCAIHNYIRRENPDDW F+LYEQDHV HMEDSLPQLEAEQLTA+IETP VD+
Sbjct: 301 TQVKLVVATCAIHNYIRRENPDDWFFRLYEQDHVPHMEDSLPQLEAEQLTANIETPIVDV 360

Query: 361 AFETEELEITSQLRDAIATELWSDYINDISPM 392
           AFETEELEI SQLRD+IA E+WSDYINDISPM
Sbjct: 361 AFETEELEIASQLRDSIAAEIWSDYINDISPM 392

[Close]

BLAST of Carg04852 vs. TrEMBL
Match: tr|M5WAT6|M5WAT6_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_5G234400 PE=4 SV=1)

HSP 1 Score: 670.2 bits (1728), Expect = 2.8e-189
Identity = 316/391 (80.82%), Postives = 351/391 (89.77%), Query Frame = 0


Query: 1   MESSDDEKDGSYGKYVPREPSHNLVSNGAKFVDEVLNGQNERCLENFRMDKHIFYKLCDI 60
           MES+DDEKD   G Y+P+E +H L S GAKF+DEVL+GQNERCLENFRMDKH+FYKLCDI
Sbjct: 1   MESTDDEKDAVSGNYIPKELTHALASTGAKFIDEVLSGQNERCLENFRMDKHVFYKLCDI 60

Query: 61  LQAKGLLRHTNRIKIEEQLAIFMFIIGHNLRTRAVQELFRYSGETISRHFNNVLNAIMAI 120
           LQ KGLLRHTNRIKIEEQLA+FMFIIGHNLRTRAVQELFRYSGETISRHFNNVLNAI AI
Sbjct: 61  LQGKGLLRHTNRIKIEEQLAMFMFIIGHNLRTRAVQELFRYSGETISRHFNNVLNAIRAI 120

Query: 121 SLDFFQPPGSNVPPEILDDPRFYPYFKDCVGAIDGIHIPVMVGVDEQGPFRNKNGLLSQN 180
           SLDFFQPPGS+VPPEI +DPRFYPYFKDCVGA+DGIHIPVMVGVDEQGPFRNKNGLLSQN
Sbjct: 121 SLDFFQPPGSDVPPEISEDPRFYPYFKDCVGAVDGIHIPVMVGVDEQGPFRNKNGLLSQN 180

Query: 181 VLAACSFDLKFHYVLAGWEGSATDLQVLNSALTRRNKLHVPEGKYYLVDQKYMNMPGFIA 240
           VLAACSFDLKFHYVLAGWEGSA+DLQVLNSALTRRNKL  PEG+YYLVD KY NMPGFIA
Sbjct: 181 VLAACSFDLKFHYVLAGWEGSASDLQVLNSALTRRNKLQTPEGRYYLVDNKYANMPGFIA 240

Query: 241 PYHDIPYQSREYTGGYHPQDAKELFNLRHSLLRNATNRTFGALKVRFPILLSAPPYPLQT 300
           PY  +PY S+E+  G+HPQDAKELFN RHS+LRNA++R FGALK RFPIL++APPYPLQT
Sbjct: 241 PYPGVPYHSKEFPSGFHPQDAKELFNQRHSMLRNASDRIFGALKARFPILMAAPPYPLQT 300

Query: 301 QVKLVVATCAIHNYIRRENPDDWLFKLYEQDHVAHMEDSLPQLEAEQLTAHIETPTVDIA 360
           QVKLVVA CA+HNY+RRE PDDW+FK+YE+D +  ME+SLP LE E +  H E   +DIA
Sbjct: 301 QVKLVVAACALHNYMRREKPDDWIFKMYEKDTILQMEESLPPLEVEPM-MHFEASAMDIA 360

Query: 361 FETEELEITSQLRDAIATELWSDYINDISPM 392
           F TEELE TSQLRD+IATE+W DYI+D+SPM
Sbjct: 361 FGTEELEFTSQLRDSIATEMWDDYIHDLSPM 390

[Close]

BLAST of Carg04852 vs. TrEMBL
Match: tr|A0A1R3KSA1|A0A1R3KSA1_9ROSI (Mitochondrial inner membrane translocase subunit Tim17/Tim22/Tim23/peroxisomal protein PMP24 OS=Corchorus olitorius OX=93759 GN=COLO4_04994 PE=4 SV=1)

HSP 1 Score: 665.6 bits (1716), Expect = 6.8e-188
Identity = 313/391 (80.05%), Postives = 351/391 (89.77%), Query Frame = 0


Query: 1   MESSDDEKDGSYGKYVPREPSHNLVSNGAKFVDEVLNGQNERCLENFRMDKHIFYKLCDI 60
           MESSDDEKDG YG Y+P+E  H+L SNG KFVDEVLNGQ+ERCLENFRMDK +FYKLCDI
Sbjct: 15  MESSDDEKDGVYGNYMPKELGHSLASNGTKFVDEVLNGQSERCLENFRMDKPVFYKLCDI 74

Query: 61  LQAKGLLRHTNRIKIEEQLAIFMFIIGHNLRTRAVQELFRYSGETISRHFNNVLNAIMAI 120
           LQ KGLLRHTNRIKIEEQLAIF+FIIGHNLRTRAVQELFRYSGETISRHFNNVLNA+MAI
Sbjct: 75  LQGKGLLRHTNRIKIEEQLAIFLFIIGHNLRTRAVQELFRYSGETISRHFNNVLNAVMAI 134

Query: 121 SLDFFQPPGSNVPPEILDDPRFYPYFKDCVGAIDGIHIPVMVGVDEQGPFRNKNGLLSQN 180
           SL+FFQPPGS+VPPEI  DPRFYPYFKDCVGA+DGIHIPVMVGVDEQGPFRNKNGLLSQN
Sbjct: 135 SLEFFQPPGSDVPPEISQDPRFYPYFKDCVGAVDGIHIPVMVGVDEQGPFRNKNGLLSQN 194

Query: 181 VLAACSFDLKFHYVLAGWEGSATDLQVLNSALTRRNKLHVPEGKYYLVDQKYMNMPGFIA 240
           VLAACSFDLKFHYVLAGWEGSA+DL+VLNSALTRRNKL VPEG+YYLVD KY NMPGFIA
Sbjct: 195 VLAACSFDLKFHYVLAGWEGSASDLRVLNSALTRRNKLQVPEGRYYLVDNKYANMPGFIA 254

Query: 241 PYHDIPYQSREYTGGYHPQDAKELFNLRHSLLRNATNRTFGALKVRFPILLSAPPYPLQT 300
           PYH +PY S E+  GYHPQDA+ELFN R  LLRNAT+RTFGALK RFPIL++APPYPLQT
Sbjct: 255 PYHGVPYNSNEFPSGYHPQDARELFNQRQFLLRNATDRTFGALKERFPILMTAPPYPLQT 314

Query: 301 QVKLVVATCAIHNYIRRENPDDWLFKLYEQDHVAHMEDSLPQLEAEQLTAHIETPTVDIA 360
           QVKLVVA CA+HNYIRRENPDD LFK+YEQ+ +  +++SL  LE EQ   HI+T  +++ 
Sbjct: 315 QVKLVVAACALHNYIRRENPDDVLFKMYEQETILQIDESLAPLEGEQAMMHIDTHDLEVG 374

Query: 361 FETEELEITSQLRDAIATELWSDYINDISPM 392
           FE E+LE+++QLRD+IATE+W DYI D++ M
Sbjct: 375 FEAEQLELSAQLRDSIATEMWDDYIRDLAAM 405

[Close]

BLAST of Carg04852 vs. TrEMBL
Match: tr|A0A2I4EVA3|A0A2I4EVA3_9ROSI (putative nuclease HARBI1 OS=Juglans regia OX=51240 GN=LOC108993030 PE=4 SV=1)

HSP 1 Score: 664.1 bits (1712), Expect = 2.0e-187
Identity = 320/391 (81.84%), Postives = 349/391 (89.26%), Query Frame = 0


Query: 1   MESSDDEKDGSYGKYVPREPSHNLVSNGAKFVDEVLNGQNERCLENFRMDKHIFYKLCDI 60
           MESSDDEKDG  G Y+P E +  L S+G KFVD+VLNGQNE CLENFRMDKH+FYKLCDI
Sbjct: 1   MESSDDEKDGVLGNYIPTELTRVLASSGVKFVDQVLNGQNELCLENFRMDKHVFYKLCDI 60

Query: 61  LQAKGLLRHTNRIKIEEQLAIFMFIIGHNLRTRAVQELFRYSGETISRHFNNVLNAIMAI 120
           LQAKGLLRHTNRIKIEEQLAIFMF+IGHNLRTRAVQELFRYSGETISRHFNNVLNAIMAI
Sbjct: 61  LQAKGLLRHTNRIKIEEQLAIFMFVIGHNLRTRAVQELFRYSGETISRHFNNVLNAIMAI 120

Query: 121 SLDFFQPPGSNVPPEILDDPRFYPYFKDCVGAIDGIHIPVMVGVDEQGPFRNKNGLLSQN 180
           SLDFFQPPGS+VPPEIL+DPRFYPYF+DCVGA+DGIHIPVMVGVDEQGPFRNKNG+LSQN
Sbjct: 121 SLDFFQPPGSDVPPEILEDPRFYPYFQDCVGAVDGIHIPVMVGVDEQGPFRNKNGMLSQN 180

Query: 181 VLAACSFDLKFHYVLAGWEGSATDLQVLNSALTRRNKLHVPEGKYYLVDQKYMNMPGFIA 240
           VLAACSFDLKFHYVLAGWEGSA+DLQVLNSALTRRNKL VP+GKYYLVD KY NM GFIA
Sbjct: 181 VLAACSFDLKFHYVLAGWEGSASDLQVLNSALTRRNKLQVPKGKYYLVDNKYANMAGFIA 240

Query: 241 PYHDIPYQSREYTGGYHPQDAKELFNLRHSLLRNATNRTFGALKVRFPILLSAPPYPLQT 300
           PY DIPY  +EY  GY PQD +ELFN RHSLLRNAT+RTFGALK RFPIL+SAPPYPLQT
Sbjct: 241 PYPDIPYYLKEYPIGYQPQDVRELFNERHSLLRNATDRTFGALKARFPILMSAPPYPLQT 300

Query: 301 QVKLVVATCAIHNYIRRENPDDWLFKLYEQDHVAHMEDSLPQLEAEQLTAHIETPTVDIA 360
           QVKLVVA CAIHNYIRRE PDDW+F++YEQ+     EDSLP L+ EQ   HI+T   DI 
Sbjct: 301 QVKLVVAACAIHNYIRREKPDDWIFRMYEQEGTV-FEDSLPPLDVEQPIMHIDTQDPDIG 360

Query: 361 FETEELEITSQLRDAIATELWSDYINDISPM 392
            ETE+LEI+SQLRD+IATE+W+DYI+D S M
Sbjct: 361 VETEQLEISSQLRDSIATEMWNDYIHDFSAM 390

[Close]

BLAST of Carg04852 vs. TrEMBL
Match: tr|A0A061FUZ8|A0A061FUZ8_THECC (Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_012889 PE=4 SV=1)

HSP 1 Score: 662.9 bits (1709), Expect = 4.4e-187
Identity = 315/391 (80.56%), Postives = 348/391 (89.00%), Query Frame = 0


Query: 1   MESSDDEKDGSYGKYVPREPSHNLVSNGAKFVDEVLNGQNERCLENFRMDKHIFYKLCDI 60
           MESSDDEKDG YG Y+P+E  H+L SNG KFVDEVLNGQ+ERCLENFRMDK +FYKLCDI
Sbjct: 16  MESSDDEKDGVYGNYMPKELGHSLASNGTKFVDEVLNGQSERCLENFRMDKPVFYKLCDI 75

Query: 61  LQAKGLLRHTNRIKIEEQLAIFMFIIGHNLRTRAVQELFRYSGETISRHFNNVLNAIMAI 120
           LQ KGLLRHTNRIKIEEQLAIF+FIIGHNLRTRAVQELFRYSGETISRHFNNVLNAIMAI
Sbjct: 76  LQGKGLLRHTNRIKIEEQLAIFLFIIGHNLRTRAVQELFRYSGETISRHFNNVLNAIMAI 135

Query: 121 SLDFFQPPGSNVPPEILDDPRFYPYFKDCVGAIDGIHIPVMVGVDEQGPFRNKNGLLSQN 180
           SL+FFQPPGS+VPP+I  DPRFYPYFKDCVGA+DGIHIPVMVGVDEQGPFRNKNGLLSQN
Sbjct: 136 SLEFFQPPGSDVPPQISQDPRFYPYFKDCVGAVDGIHIPVMVGVDEQGPFRNKNGLLSQN 195

Query: 181 VLAACSFDLKFHYVLAGWEGSATDLQVLNSALTRRNKLHVPEGKYYLVDQKYMNMPGFIA 240
           VLAACSFDLKFHYVLAGWEGSA+DL+VLNSALTRRNKL VPEG+YYLVD KY NMPGFIA
Sbjct: 196 VLAACSFDLKFHYVLAGWEGSASDLRVLNSALTRRNKLQVPEGRYYLVDNKYANMPGFIA 255

Query: 241 PYHDIPYQSREYTGGYHPQDAKELFNLRHSLLRNATNRTFGALKVRFPILLSAPPYPLQT 300
           PY  +PY S E++ GYH QDAKELFN RH LLRNAT+RTFGALK RFPIL+SAPPYPLQT
Sbjct: 256 PYFGVPYNSNEFSSGYHLQDAKELFNQRHFLLRNATDRTFGALKERFPILMSAPPYPLQT 315

Query: 301 QVKLVVATCAIHNYIRRENPDDWLFKLYEQDHVAHMEDSLPQLEAEQLTAHIETPTVDIA 360
           QVKLVVA CA+HNYIRRE PDD LFK+YE + V  +E+SLP LE EQ   HI+   +++ 
Sbjct: 316 QVKLVVAACALHNYIRREKPDDLLFKMYEPETVQQIEESLPPLEVEQAMMHIDNHDLEVG 375

Query: 361 FETEELEITSQLRDAIATELWSDYINDISPM 392
           FE E+LE++SQLRD+IATE+W DYI D+  M
Sbjct: 376 FEAEQLELSSQLRDSIATEMWDDYIRDLEAM 406

The following BLAST results are available for this feature:

BLAST of Carg04852 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022924205.1	1.2e-228	99.23	putative nuclease HARBI1 isoform X2 [Cucurbita moschata] >XP_022924206.1 putativ...	[more]
XP_023520117.1	2.7e-228	98.98	putative nuclease HARBI1 [Cucurbita pepo subsp. pepo]	[more]
XP_023001791.1	2.5e-226	98.47	putative nuclease HARBI1 [Cucurbita maxima]	[more]
XP_004137507.1	1.2e-215	93.37	PREDICTED: putative nuclease HARBI1 [Cucumis sativus]	[more]
XP_016899554.1	1.5e-215	93.37	PREDICTED: uncharacterized protein LOC103502878 [Cucumis melo]	[more]

BLAST of Carg04852 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G41980.1	9.1e-138	64.84	Putative harbinger transposase-derived nuclease (InterPro:IPR006912)	[more]
AT1G43722.1	1.1e-37	34.41	unknown protein	[more]
AT5G28950.1	2.5e-26	59.38	unknown protein	[more]
AT5G35695.1	3.0e-24	35.53	Putative harbinger transposase-derived nuclease (InterPro:IPR006912)	[more]
AT5G28730.1	3.0e-24	31.71	unknown protein	[more]

BLAST of Carg04852 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Carg04852 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S4DU98\|A0A1S4DU98_CUCME	1.0e-215	93.37	uncharacterized protein LOC103502878 OS=Cucumis melo OX=3656 GN=LOC103502878 PE=...	[more]
tr\|M5WAT6\|M5WAT6_PRUPE	2.8e-189	80.82	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_5G234400 PE=4 SV=1	[more]
tr\|A0A1R3KSA1\|A0A1R3KSA1_9ROSI	6.8e-188	80.05	Mitochondrial inner membrane translocase subunit Tim17/Tim22/Tim23/peroxisomal p...	[more]
tr\|A0A2I4EVA3\|A0A2I4EVA3_9ROSI	2.0e-187	81.84	putative nuclease HARBI1 OS=Juglans regia OX=51240 GN=LOC108993030 PE=4 SV=1	[more]
tr\|A0A061FUZ8\|A0A061FUZ8_THECC	4.4e-187	80.56	Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_012889 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR027806	HARBI1_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg04852-RA	Carg04852-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR027806	Harbinger transposase-derived nuclease domain	PFAM	PF13359	DDE_Tnp_4	coord: 153..313 e-value: 2.3E-15 score: 56.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..21
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..15
None	No IPR available	PANTHER	PTHR22930:SF35	SUBFAMILY NOT NAMED	coord: 10..366
None	No IPR available	PANTHER	PTHR22930	UNCHARACTERIZED	coord: 10..366

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg04852	Csa1G042870	Cucumber (Chinese Long) v2	carcuB0415
Carg04852	ClCG04G010580	Watermelon (Charleston Gray)	carwcgB0383
Carg04852	CSPI01G07270	Wild cucumber (PI 183967)	carcpiB0418
Carg04852	Cucsa.121980	Cucumber (Gy14) v1	carcgyB0452
Carg04852	CmaCh13G009840	Cucurbita maxima (Rimu)	carcmaB0540
Carg04852	CmoCh13G010190	Cucurbita moschata (Rifu)	carcmoB0526
Carg04852	Lsi02G002410	Bottle gourd (USVL1VR-Ls)	carlsiB353
Carg04852	Cp4.1LG20g01630	Cucurbita pepo (Zucchini)	carcpeB0544
Carg04852	CsGy1G007110	Cucumber (Gy14) v2	carcgybB0393
Carg04852	MELO3C035756.2	Melon (DHL92) v3.6.1	carmedB0397
Carg04852	CsaV3_1G007210	Cucumber (Chinese Long) v3	carcucB0418
Carg04852	Cla97C04G077400	Watermelon (97103) v2	carwmbB0409
Carg04852	Bhi08G001082	Wax gourd	carwgoB0473

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg04852	Silver-seed gourd	carcarB411
Carg04852	Cucurbita maxima (Rimu)	carcmaB0541
Carg04852	Cucurbita moschata (Rifu)	carcmoB0527
Carg04852	Cucurbita pepo (Zucchini)	carcpeB0539
Carg04852	Melon (DHL92) v3.5.1	carmeB0393
Carg04852	Watermelon (97103) v1	carwmB0387