Carg04206 (gene) Silver-seed gourd

Overview
NameCarg04206
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionEthylene-responsive transcription factor
LocationCucurbita_argyrosperma_scaffold_044 : 831681 .. 833454 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTACCCCTACAGATTGAAATCTCTTGCTAGCGAACTGTGGGAATCCTTCTCTTCCCAATATTTTTCTTTTTGAATTAAGGTTTAAAGAACAGAGGGGTGGGATTTATGTAGGTATGCTAGGATTGGAGTAAAGGGGCAGAAAATCACAACCCTGCAACAGCCAAGACCTTCATTTACTTGCATCTACCGCAGGCACTTGGTTGGAGTGCATAATTTTGTTGATTGCTGTACTTGTTTACAATGTTCTTGCAGGCTTAGAATTTTTCCCCCTTCGAATGTATCCTATTCTCTGATGTCATATTACTCTAGGTTTAACGAGGCAGCACAAATCTTTGAATATATTTTTACTTCAGATCCTAGTGCACAAGTTTCTTTGTATGATTGGGAAACACTGATCTTTCTAATACATCTGAAATTTACACCATACTTATTATTAATATTGTATTCACATTAGTTACCTTTTGTTTATATTTTTCGTTAATTCAATTCTCATTTGGATGTCAAACTGTATAGGTGTACATGGTCAAGTCGGGTTGGATTGAGAAATTTTTTTGGACCCACACAGAAATTTGGATTTGTTAGATTGGTAACTCAACTCAATCCTTTATTTTCTATAGAAAATTTTAAAAAAGTTTTATTTATTCTTAATTCATAATTATTTTATACAATTTTACATAAATAAATAAATAAATATATATATATATATATATATATATATATATATATTAATTAGACCAACCCAAAAAGATATTTTAATATATTTTATAAGATTTTGTTCATCAACCTTAAGTTTTGTCCGATGAACTTGACACCCGAATTGAATATATTCGGGTTTAGAAAAATTAACTCGACCGGTTGGGTTGTGTTGGTTCAGTTGGAATTGTCAAGTTTATTGTACACCCTAACATGAAAAGCAAAAAGAAGAAAAAGACAAAAAAAAAGGTTGGTATAAATTTGGACTATTCCCAGGTCTCTCCCATTTCCATCACACACTCTCTCTCTCTCTCTTACAGTCTTTCTCTCTCTAAAATGGCAAGACCTCAACAGCGCTATCGAGGAGTCCGGCAAAGGCATTGGGGCTCTTGGGTCTCCGAGATTCGTCACCCTTTACTGTAACTCTTCTAATATCACTTCTCCTCTACTTTTGTACTATAAATTTTTAACTAATTAATGAACTAAATCGTTACTTTATTATTTTTAAATATCAAAATACGTTTCTTTAATAAATTATGATTTGATTTTTTTTTTTTTTTTTTCTTTTTGTCTCTCCTTCAGGAAGACAAGGATATGGCTGGGAACTTTCGAAACGGCGGAAGACGCAGCCAGAGCATACGACGAAGCAGCCAGAATCATGTGTTGCCCTAACAATCTCCCAACCAATCACAACGCGCCACGTCACTCTTTGTCCGCGCCGCCGCCGTCCTCGAACCTTCTAACCCCGACATTGATCGAGAAGTTGCAGAAATGTCGAACGGCTTCTTTCCAAATGGTCAAAAAGCAATTCCCCAACAAAACCCACTTCTCCGACCGGAAATCCGCTCACCCAAGTCGCCGTCAGCCCACCAATTTCGACGACGGCTATGGTGCCTCCGGCGTTCACTTTCCGGAGACGGACTCCAAGTGGGTCGCCGGCGGTCAGGCTCAGGAGATCGCCCGGCTTGAAGATGATCACGTAGAGCAAATGATTCAAGAATTGCTTGATCTTGGGTCATTTGAGTTTTGCCCTAATAATAATAATTATCTTAATGATATTGAGTCTACAAATAATTAA

mRNA sequence

ATGGTCTCTCCCATTTCCATCACACACTCTCTCTCTCTCTCTTACAGTCTTTCTCTCTCTAAAATGGCAAGACCTCAACAGCGCTATCGAGGAGTCCGGCAAAGGCATTGGGGCTCTTGGGTCTCCGAGATTCGTCACCCTTTACTGAAGACAAGGATATGGCTGGGAACTTTCGAAACGGCGGAAGACGCAGCCAGAGCATACGACGAAGCAGCCAGAATCATGTGTTGCCCTAACAATCTCCCAACCAATCACAACGCGCCACGTCACTCTTTGTCCGCGCCGCCGCCGTCCTCGAACCTTCTAACCCCGACATTGATCGAGAAGTTGCAGAAATGTCGAACGGCTTCTTTCCAAATGGTCAAAAAGCAATTCCCCAACAAAACCCACTTCTCCGACCGGAAATCCGCTCACCCAAGTCGCCGTCAGCCCACCAATTTCGACGACGGCTATGGTGCCTCCGGCGTTCACTTTCCGGAGACGGACTCCAAGTGGGTCGCCGGCGGTCAGGCTCAGGAGATCGCCCGGCTTGAAGATGATCACGTAGAGCAAATGATTCAAGAATTGCTTGATCTTGGGTCATTTGAGTTTTGCCCTAATAATAATAATTATCTTAATGATATTGAGTCTACAAATAATTAA

Coding sequence (CDS)

ATGGTCTCTCCCATTTCCATCACACACTCTCTCTCTCTCTCTTACAGTCTTTCTCTCTCTAAAATGGCAAGACCTCAACAGCGCTATCGAGGAGTCCGGCAAAGGCATTGGGGCTCTTGGGTCTCCGAGATTCGTCACCCTTTACTGAAGACAAGGATATGGCTGGGAACTTTCGAAACGGCGGAAGACGCAGCCAGAGCATACGACGAAGCAGCCAGAATCATGTGTTGCCCTAACAATCTCCCAACCAATCACAACGCGCCACGTCACTCTTTGTCCGCGCCGCCGCCGTCCTCGAACCTTCTAACCCCGACATTGATCGAGAAGTTGCAGAAATGTCGAACGGCTTCTTTCCAAATGGTCAAAAAGCAATTCCCCAACAAAACCCACTTCTCCGACCGGAAATCCGCTCACCCAAGTCGCCGTCAGCCCACCAATTTCGACGACGGCTATGGTGCCTCCGGCGTTCACTTTCCGGAGACGGACTCCAAGTGGGTCGCCGGCGGTCAGGCTCAGGAGATCGCCCGGCTTGAAGATGATCACGTAGAGCAAATGATTCAAGAATTGCTTGATCTTGGGTCATTTGAGTTTTGCCCTAATAATAATAATTATCTTAATGATATTGAGTCTACAAATAATTAA

Protein sequence

MVSPISITHSLSLSYSLSLSKMARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARIMCCPNNLPTNHNAPRHSLSAPPPSSNLLTPTLIEKLQKCRTASFQMVKKQFPNKTHFSDRKSAHPSRRQPTNFDDGYGASGVHFPETDSKWVAGGQAQEIARLEDDHVEQMIQELLDLGSFEFCPNNNNYLNDIESTNN
Homology
[Close]
BLAST of Carg04206 vs. NCBI nr
Match: XP_022949239.1 (ethylene-responsive transcription factor ERF003-like [Cucurbita moschata])

HSP 1 Score: 398.3 bits (1022), Expect = 1.7e-107
Identity = 191/192 (99.48%), Postives = 192/192 (100.00%), Query Frame = 0 

Query: 22  MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARIMCCPNNL 81
           MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARIMCCPNNL
Sbjct: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARIMCCPNNL 60

Query: 82  PTNHNAPRHSLSAPPPSSNLLTPTLIEKLQKCRTASFQMVKKQFPNKTHFSDRKSAHPSR 141
           PTNHNAPRHSLSAPPPSSNLLTPTLIEKLQKCRTASFQMVKKQFPNKTHFSDRKSAHPSR
Sbjct: 61  PTNHNAPRHSLSAPPPSSNLLTPTLIEKLQKCRTASFQMVKKQFPNKTHFSDRKSAHPSR 120

Query: 142 RQPTNFDDGYGASGVHFPETDSKWVAGGQAQEIARLEDDHVEQMIQELLDLGSFEFCPNN 201
           RQPTNFDDGYGASGVHFPETDSKWVAGG+AQEIARLEDDHVEQMIQELLDLGSFEFCPNN
Sbjct: 121 RQPTNFDDGYGASGVHFPETDSKWVAGGEAQEIARLEDDHVEQMIQELLDLGSFEFCPNN 180

Query: 202 NNYLNDIESTNN 214
           NNYLNDIESTNN
Sbjct: 181 NNYLNDIESTNN 192

[Close]
BLAST of Carg04206 vs. NCBI nr
Match: XP_023525763.1 (ethylene-responsive transcription factor ERF003-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 384.8 bits (987), Expect = 1.9e-103
Identity = 184/192 (95.83%), Postives = 188/192 (97.92%), Query Frame = 0 

Query: 22  MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARIMCCPNNL 81
           MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARIMCCPNNL
Sbjct: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARIMCCPNNL 60

Query: 82  PTNHNAPRHSLSAPPPSSNLLTPTLIEKLQKCRTASFQMVKKQFPNKTHFSDRKSAHPSR 141
           PTNHN+PRHSLSAPPPSSNLLTPTLIEKLQKCRTASFQMVKKQFPNKTHFSDRKSAHPSR
Sbjct: 61  PTNHNSPRHSLSAPPPSSNLLTPTLIEKLQKCRTASFQMVKKQFPNKTHFSDRKSAHPSR 120

Query: 142 RQPTNFDDGYGASGVHFPETDSKWVAGGQAQEIARLEDDHVEQMIQELLDLGSFEFCPNN 201
             PTN +DGYGASGVH PETD+KWVAGG+AQEIARLEDDHVEQMIQELLDLGSFEFCPNN
Sbjct: 121 PHPTNLNDGYGASGVHLPETDAKWVAGGEAQEIARLEDDHVEQMIQELLDLGSFEFCPNN 180

Query: 202 NNYLNDIESTNN 214
           NNYLNDIESTNN
Sbjct: 181 NNYLNDIESTNN 192

[Close]
BLAST of Carg04206 vs. NCBI nr
Match: XP_022998174.1 (ethylene-responsive transcription factor ERF003-like [Cucurbita maxima])

HSP 1 Score: 371.7 bits (953), Expect = 1.7e-99
Identity = 181/192 (94.27%), Postives = 185/192 (96.35%), Query Frame = 0 

Query: 22  MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARIMCCPNNL 81
           MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARIMCCPNNL
Sbjct: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARIMCCPNNL 60

Query: 82  PTNHNAPRHSLSAPPPSSNLLTPTLIEKLQKCRTASFQMVKKQFPNKTHFSDRKSAHPSR 141
           PTN NAP HSLSAPPP SNLLTPTLIEKLQKCRTASFQMVKKQFPNKTHFSDRKSAHPSR
Sbjct: 61  PTNRNAPLHSLSAPPP-SNLLTPTLIEKLQKCRTASFQMVKKQFPNKTHFSDRKSAHPSR 120

Query: 142 RQPTNFDDGYGASGVHFPETDSKWVAGGQAQEIARLEDDHVEQMIQELLDLGSFEFCPNN 201
            QPTN DD YG+SGVHFPETD+KWVAG +AQEIARLEDDHVEQMIQELLDLGSFEFCPNN
Sbjct: 121 PQPTNLDDAYGSSGVHFPETDAKWVAGEEAQEIARLEDDHVEQMIQELLDLGSFEFCPNN 180

Query: 202 NNYLNDIESTNN 214
           NN+LNDIESTNN
Sbjct: 181 NNHLNDIESTNN 191

[Close]
BLAST of Carg04206 vs. NCBI nr
Match: XP_008454208.1 (PREDICTED: ethylene-responsive transcription factor ERF003-like [Cucumis melo])

HSP 1 Score: 249.2 bits (635), Expect = 1.2e-62
Identity = 128/183 (69.95%), Postives = 143/183 (78.14%), Query Frame = 0 

Query: 22  MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARIMCC-PNN 81
           M RPQQRYRGVRQRHWGSWVSEIRHP+LKTRIWLGTFETAEDAARAYDEAA IMCC PNN
Sbjct: 1   MGRPQQRYRGVRQRHWGSWVSEIRHPILKTRIWLGTFETAEDAARAYDEAATIMCCTPNN 60

Query: 82  LPTNHNAPRHSLSAPPPSSNLLTPTLIEKLQKCRTASFQMVKKQFPNKTHFSDRKSAHPS 141
           L TNH+AP H  S   PSS LLTPTLIEKLQ+CR AS QM K Q      F+ RKSA P+
Sbjct: 61  LSTNHSAPHHP-SPASPSSKLLTPTLIEKLQRCRMASLQMTKAQ------FAVRKSADPT 120

Query: 142 RRQPTNFDDGYGASGVHFPETDSKWVAGGQAQEIARLEDDHVEQMIQELLDLGSFEFCPN 201
           +   T  + G      H+PE +++WV+  + +E+ RLEDDHVEQMIQELLDLGSFEFCPN
Sbjct: 121 QSPATKLEGG------HWPEKEARWVSSREVEEVRRLEDDHVEQMIQELLDLGSFEFCPN 170

Query: 202 NNN 204
           NNN
Sbjct: 181 NNN 170

[Close]
BLAST of Carg04206 vs. NCBI nr
Match: XP_022153447.1 (ethylene-responsive transcription factor ERF003-like, partial [Momordica charantia])

HSP 1 Score: 243.8 bits (621), Expect = 5.2e-61
Identity = 131/184 (71.20%), Postives = 136/184 (73.91%), Query Frame = 0 

Query: 22  MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARIMCCPNNL 81
           MARPQ +YRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARIMCCPNNL
Sbjct: 1   MARPQHKYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARIMCCPNNL 60

Query: 82  PTNHNAP---RHSLSAPPPSSNLLTPTLIEKLQKCRTASFQMVKKQFPNKTHFSDRKSAH 141
            +NHNAP     S S   P S LLTPTLI+KL+KCR ASFQM KK+ P KTH SDR    
Sbjct: 61  SSNHNAPPQYSSSASTLGPVSKLLTPTLIDKLEKCRMASFQMAKKKLPTKTHLSDR---- 120

Query: 142 PSRRQPTNFDDGYGASGVHFPETDSKWVAGGQAQEIARLEDDHVEQMIQELLDLGSFEFC 201
            SRR     D G    GV  PET          QE  RLEDDHVEQMIQELLDLGSF FC
Sbjct: 121 -SRRPAAKLDGG----GVQSPET----------QEFHRLEDDHVEQMIQELLDLGSFHFC 165

Query: 202 PNNN 203
           PNNN
Sbjct: 181 PNNN 165

[Close]
BLAST of Carg04206 vs. TAIR10
Match: AT5G25190.1 (Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 161.0 bits (406), Expect = 8.1e-40
Identity = 98/182 (53.85%), Postives = 107/182 (58.79%), Query Frame = 0 

Query: 22  MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARIMCCP--- 81
           MARPQQR+RGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAAR+MC P   
Sbjct: 1   MARPQQRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60

Query: 82  NNLPTNHNAPRHSLSAPPPSSNLLTPTLIEKLQKCRTASFQMVKKQFPNKTHFSDRKSAH 141
            N P N NA       P  SS LL+ TL  KL KC  AS QM K                
Sbjct: 61  TNFPYNPNA------IPTSSSKLLSATLTAKLHKCYMASLQMTKXXXXXXXXXXXXXXXX 120

Query: 142 PSRRQPTNFDDGYGASGVHFPETDSKWVAG--GQAQEIARLEDDHVEQMIQELLDLGSFE 199
                  N  + +   GV    T+ KW  G     Q    LE+DH+EQMI+ELL  GS E
Sbjct: 121 XXXXVTAN--ESHLNRGV-TETTEIKWEDGNANMQQNFRPLEEDHIEQMIEELLHYGSIE 173

[Close]
BLAST of Carg04206 vs. TAIR10
Match: AT1G15360.1 (Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 97.8 bits (242), Expect = 8.4e-21
Identity = 46/63 (73.02%), Postives = 53/63 (84.13%), Query Frame = 0 

Query: 27 QRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARIMCCPN---NLPT 86
          +++RGVRQRHWGSWV+EIRHPLLK RIWLGTFETAE+AARAYDEAA +M   N   N P 
Sbjct: 5  KKFRGVRQRHWGSWVAEIRHPLLKRRIWLGTFETAEEAARAYDEAAVLMSGRNAKTNFPL 64

[Close]
BLAST of Carg04206 vs. TAIR10
Match: AT5G11190.1 (Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 87.8 bits (216), Expect = 8.7e-18
Identity = 50/93 (53.76%), Postives = 62/93 (66.67%), Query Frame = 0 

Query: 27  QRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARIMCCPN---NLPT 86
           +++RGVRQR WGSWVSEIRHPLLK R+WLGTFETAE AARAYD+AA +M   N   N P 
Sbjct: 5   RKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFETAEAAARAYDQAALLMNGQNAKTNFPV 64

Query: 87  --NHNAPRH--SLSAPPPSSNLLTPTLIEKLQK 113
             +     H   +++P  S   L+  L  KL+K
Sbjct: 65  VKSEEGSDHVKDVNSPLMSPKSLSELLNAKLRK 97

[Close]
BLAST of Carg04206 vs. TAIR10
Match: AT5G25390.2 (Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 84.7 bits (208), Expect = 7.4e-17
Identity = 67/177 (37.85%), Postives = 91/177 (51.41%), Query Frame = 0 

Query: 27  QRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARIM---CCPNNLPT 86
           +++RGVRQR WGSWVSEIRHPLLK R+WLGTF+TAE AARAYD+AA +M       N P 
Sbjct: 5   KKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAETAARAYDQAAVLMNGQSAKTNFPV 64

Query: 87  NHNAPRHSL--SAPPPSSNLLTPTLIEKLQK-CRTASFQMVKKQFPN-KTHFSDRKSAHP 146
             +   +SL  ++   S   L+  L  KL+K C+  +  +   +  N  +H    +    
Sbjct: 65  IKSNGSNSLEINSALRSPKSLSELLNAKLRKNCKDQTPYLTCLRLDNDSSHIGVWQKRAG 124

Query: 147 SRRQP-----TNFDDGYGASGVHFPETDSKWVAGGQAQEIARLEDDHVEQMIQELLD 192
           S+  P         D   A      ET+   V     QE    +D    QMI+ELL+
Sbjct: 125 SKTSPNWVKLVELGDKVNARPGGDIETNKMKVRNEDVQE----DDQMAMQMIEELLN 177

[Close]
BLAST of Carg04206 vs. TAIR10
Match: AT1G22190.1 (Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 81.3 bits (199), Expect = 8.2e-16
Identity = 35/50 (70.00%), Postives = 43/50 (86.00%), Query Frame = 0 

Query: 23  ARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAA 73
           A+P + YRGVRQRHWG WV+EIR P  +TR+WLGTF+TAE+AA AYD+AA
Sbjct: 77  AKPTKLYRGVRQRHWGKWVAEIRLPRNRTRLWLGTFDTAEEAALAYDKAA 126

[Close]
BLAST of Carg04206 vs. Swiss-Prot
Match: sp|Q94AW5|ERF03_ARATH (Ethylene-responsive transcription factor ERF003 OS=Arabidopsis thaliana OX=3702 GN=ERF003 PE=2 SV=1)

HSP 1 Score: 161.0 bits (406), Expect = 1.5e-38
Identity = 98/182 (53.85%), Postives = 107/182 (58.79%), Query Frame = 0 

Query: 22  MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARIMCCP--- 81
           MARPQQR+RGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAAR+MC P   
Sbjct: 1   MARPQQRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60

Query: 82  NNLPTNHNAPRHSLSAPPPSSNLLTPTLIEKLQKCRTASFQMVKKQFPNKTHFSDRKSAH 141
            N P N NA       P  SS LL+ TL  KL KC  AS QM K                
Sbjct: 61  TNFPYNPNA------IPTSSSKLLSATLTAKLHKCYMASLQMTKXXXXXXXXXXXXXXXX 120

Query: 142 PSRRQPTNFDDGYGASGVHFPETDSKWVAG--GQAQEIARLEDDHVEQMIQELLDLGSFE 199
                  N  + +   GV    T+ KW  G     Q    LE+DH+EQMI+ELL  GS E
Sbjct: 121 XXXXVTAN--ESHLNRGV-TETTEIKWEDGNANMQQNFRPLEEDHIEQMIEELLHYGSIE 173

[Close]
BLAST of Carg04206 vs. Swiss-Prot
Match: sp|P16146|PZ02_LUPPO (Protein PPLZ02 OS=Lupinus polyphyllus OX=3874 GN=PPLZ02 PE=2 SV=1)

HSP 1 Score: 136.3 bits (342), Expect = 3.9e-31
Identity = 87/178 (48.88%), Postives = 102/178 (57.30%), Query Frame = 0 

Query: 22  MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARIMC---CP 81
           MARPQQRYRG RQRHWGSWVSEIRH +LKTRIW GTFE+AEDAARAYDEAAR+MC     
Sbjct: 1   MARPQQRYRGFRQRHWGSWVSEIRHSILKTRIWQGTFESAEDAARAYDEAARLMCGTRAR 60

Query: 82  NNLPTNHNAPRHSLSAPPPSSNLLTPTLIEKLQKCRTASFQMVKKQFPNKTHFSDRKSAH 141
            N P N NA + S      SS LL+ TLI KL +C  AS QM +   P+    + R  A 
Sbjct: 61  TNFPYNPNASQSS------SSKLLSATLIAKLHRCYMASLQMTR---PSSLPEAPRIIA- 120

Query: 142 PSRRQPTNFDDGYGASGVHFPE------------TDSKWVAGGQAQEIARLEDDHVEQ 185
                P N   G GA  +  P+             D K V    +Q+   LE+DH+ Q
Sbjct: 121 ----SPNNAVKGIGADAMLLPKKREQEEQETGGNLDFKKVKVECSQQFKPLEEDHIAQ 164

[Close]
BLAST of Carg04206 vs. Swiss-Prot
Match: sp|Q9XI33|WIN1_ARATH (Ethylene-responsive transcription factor WIN1 OS=Arabidopsis thaliana OX=3702 GN=WIN1 PE=2 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 1.5e-19
Identity = 46/63 (73.02%), Postives = 53/63 (84.13%), Query Frame = 0 

Query: 27 QRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARIMCCPN---NLPT 86
          +++RGVRQRHWGSWV+EIRHPLLK RIWLGTFETAE+AARAYDEAA +M   N   N P 
Sbjct: 5  KKFRGVRQRHWGSWVAEIRHPLLKRRIWLGTFETAEEAARAYDEAAVLMSGRNAKTNFPL 64

[Close]
BLAST of Carg04206 vs. Swiss-Prot
Match: sp|Q9LFN7|SHN2_ARATH (Ethylene-responsive transcription factor SHINE 2 OS=Arabidopsis thaliana OX=3702 GN=SHN2 PE=2 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 1.6e-16
Identity = 50/93 (53.76%), Postives = 62/93 (66.67%), Query Frame = 0 

Query: 27  QRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARIMCCPN---NLPT 86
           +++RGVRQR WGSWVSEIRHPLLK R+WLGTFETAE AARAYD+AA +M   N   N P 
Sbjct: 5   RKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFETAEAAARAYDQAALLMNGQNAKTNFPV 64

Query: 87  --NHNAPRH--SLSAPPPSSNLLTPTLIEKLQK 113
             +     H   +++P  S   L+  L  KL+K
Sbjct: 65  VKSEEGSDHVKDVNSPLMSPKSLSELLNAKLRK 97

[Close]
BLAST of Carg04206 vs. Swiss-Prot
Match: sp|Q3E958|SHN3_ARATH (Ethylene-responsive transcription factor SHINE 3 OS=Arabidopsis thaliana OX=3702 GN=SHN3 PE=2 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 1.3e-15
Identity = 67/177 (37.85%), Postives = 91/177 (51.41%), Query Frame = 0 

Query: 27  QRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARIM---CCPNNLPT 86
           +++RGVRQR WGSWVSEIRHPLLK R+WLGTF+TAE AARAYD+AA +M       N P 
Sbjct: 5   KKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAETAARAYDQAAVLMNGQSAKTNFPV 64

Query: 87  NHNAPRHSL--SAPPPSSNLLTPTLIEKLQK-CRTASFQMVKKQFPN-KTHFSDRKSAHP 146
             +   +SL  ++   S   L+  L  KL+K C+  +  +   +  N  +H    +    
Sbjct: 65  IKSNGSNSLEINSALRSPKSLSELLNAKLRKNCKDQTPYLTCLRLDNDSSHIGVWQKRAG 124

Query: 147 SRRQP-----TNFDDGYGASGVHFPETDSKWVAGGQAQEIARLEDDHVEQMIQELLD 192
           S+  P         D   A      ET+   V     QE    +D    QMI+ELL+
Sbjct: 125 SKTSPNWVKLVELGDKVNARPGGDIETNKMKVRNEDVQE----DDQMAMQMIEELLN 177

[Close]
BLAST of Carg04206 vs. TrEMBL
Match: tr|A0A1S3BY29|A0A1S3BY29_CUCME (ethylene-responsive transcription factor ERF003-like OS=Cucumis melo OX=3656 GN=LOC103494684 PE=4 SV=1)

HSP 1 Score: 249.2 bits (635), Expect = 8.2e-63
Identity = 128/183 (69.95%), Postives = 143/183 (78.14%), Query Frame = 0 

Query: 22  MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARIMCC-PNN 81
           M RPQQRYRGVRQRHWGSWVSEIRHP+LKTRIWLGTFETAEDAARAYDEAA IMCC PNN
Sbjct: 1   MGRPQQRYRGVRQRHWGSWVSEIRHPILKTRIWLGTFETAEDAARAYDEAATIMCCTPNN 60

Query: 82  LPTNHNAPRHSLSAPPPSSNLLTPTLIEKLQKCRTASFQMVKKQFPNKTHFSDRKSAHPS 141
           L TNH+AP H  S   PSS LLTPTLIEKLQ+CR AS QM K Q      F+ RKSA P+
Sbjct: 61  LSTNHSAPHHP-SPASPSSKLLTPTLIEKLQRCRMASLQMTKAQ------FAVRKSADPT 120

Query: 142 RRQPTNFDDGYGASGVHFPETDSKWVAGGQAQEIARLEDDHVEQMIQELLDLGSFEFCPN 201
           +   T  + G      H+PE +++WV+  + +E+ RLEDDHVEQMIQELLDLGSFEFCPN
Sbjct: 121 QSPATKLEGG------HWPEKEARWVSSREVEEVRRLEDDHVEQMIQELLDLGSFEFCPN 170

Query: 202 NNN 204
           NNN
Sbjct: 181 NNN 170

[Close]
BLAST of Carg04206 vs. TrEMBL
Match: tr|A0A0A0KVJ4|A0A0A0KVJ4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G006210 PE=4 SV=1)

HSP 1 Score: 236.9 bits (603), Expect = 4.2e-59
Identity = 127/193 (65.80%), Postives = 140/193 (72.54%), Query Frame = 0 

Query: 22  MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARIMCC-PNN 81
           M RPQQRYRGVRQRHWGSWVSEIRHP+LKTRIWLGTFETAEDAARAYDEAA IMCC PNN
Sbjct: 1   MGRPQQRYRGVRQRHWGSWVSEIRHPILKTRIWLGTFETAEDAARAYDEAATIMCCTPNN 60

Query: 82  LPTNHNAPRHSLSAPPPSSNLLTPTLIEKLQKCRTASFQMVKKQFPNKTHFSDRKSAHPS 141
           L TNH+A  H  SA P SS LLTPT IEKLQ+CR AS QM K Q      F+ RKSA P+
Sbjct: 61  LSTNHSASHHPSSA-PLSSKLLTPTSIEKLQRCRMASLQMTKAQ------FAVRKSADPT 120

Query: 142 RRQPTNFDDGYGASGVHFPETDSKWVAGGQAQEIARLEDDHVEQMIQELLDLGSFEFCPN 201
           +   T  D G      H+PE  ++WV   + +E+ RLED+HVEQMIQELLDLGSFEFCPN
Sbjct: 121 QSPATKLDGG------HWPEKAARWVPSREVEEVRRLEDEHVEQMIQELLDLGSFEFCPN 180

Query: 202 NNNYLNDIESTNN 214
                     TNN
Sbjct: 181 XXXXXXXXXXTNN 180

[Close]
BLAST of Carg04206 vs. TrEMBL
Match: tr|W9RS58|W9RS58_9ROSA (Ethylene-responsive transcription factor OS=Morus notabilis OX=981085 GN=L484_025682 PE=4 SV=1)

HSP 1 Score: 185.7 bits (470), Expect = 1.1e-43
Identity = 107/197 (54.31%), Postives = 121/197 (61.42%), Query Frame = 0 

Query: 22  MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARIMCCP--- 81
           MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYD+AARIMC P   
Sbjct: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDQAARIMCGPKAR 60

Query: 82  NNLPTNHNAPRHSLSAPPPSSNLLTPTLIEKLQKCRTASFQMVKKQFPNKTHFSDRKSAH 141
            N P N N P HS S    S+ LL+ TL  KLQKC  AS QM K+   ++ H +  +SA 
Sbjct: 61  TNFPYNPNEP-HSSS----SNKLLSDTLKAKLQKCNVASLQMAKQPVLSEPHVAQYRSAT 120

Query: 142 PSRRQPTNFDDGYGASGVHFPE--------TDSKWVAGGQAQEIAR--------LEDDHV 200
           P            G +G  +PE         +  WV G    EI+         LEDDH+
Sbjct: 121 PVSTSSAGIAGNRGMAGFEWPEKRGGVVDWPEGNWVGGNGQGEISSTNQQLIKPLEDDHI 180

[Close]
BLAST of Carg04206 vs. TrEMBL
Match: tr|A0A2C9V060|A0A2C9V060_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_11G064200 PE=4 SV=1)

HSP 1 Score: 179.9 bits (455), Expect = 6.1e-42
Identity = 105/189 (55.56%), Postives = 114/189 (60.32%), Query Frame = 0 

Query: 22  MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARIMCCP--- 81
           MAR QQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAAR+MC P   
Sbjct: 1   MARQQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR 60

Query: 82  NNLPTNHNAPRHSLSAPPPSSNLLTPTLIEKLQKCRTASFQMVKKQFPNKTHFSDRKSAH 141
            N P N N P+ S      SS LL+ TL  KL KC  AS Q  KK    +TH        
Sbjct: 61  TNFPCNPNEPQSS------SSKLLSTTLAAKLHKCHVASLQATKKNATKQTH-------- 120

Query: 142 PSRRQPTNFDDGYGASGVHFPETDS----KWV-----AGGQAQEIARLEDDHVEQMIQEL 199
               + T FD   G +G       S    KWV      G   Q+   LED H+EQMI+EL
Sbjct: 121 --EPEYTPFDSSNGIAGKSVESCSSWPEGKWVGEENEVGNSQQQDKELEDHHIEQMIEEL 173

[Close]
BLAST of Carg04206 vs. TrEMBL
Match: tr|A0A1R3J7C7|A0A1R3J7C7_9ROSI (Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_18930 PE=4 SV=1)

HSP 1 Score: 178.7 bits (452), Expect = 1.4e-41
Identity = 107/199 (53.77%), Postives = 121/199 (60.80%), Query Frame = 0 

Query: 22  MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARIMCCP--- 81
           MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAAR+MC P   
Sbjct: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60

Query: 82  NNLPTNHNAPRHSLSAPPPSSNLLTPTLIEKLQKCRTASFQMVKKQFPNKTHFSDRKSAH 141
            N P N NAP+ S      SS LL+ TL  KL KC  AS QM K+Q           S H
Sbjct: 61  TNFPYNPNAPQSS------SSKLLSATLTAKLHKCYMASLQMTKQQ-----------SGH 120

Query: 142 -PSRRQPTN--FDDGYGASG-----------VHFPETDSKWVA-----GGQAQEIARLED 199
            P  + PT   F +  G +G           +   ET++ WV          Q+   LE+
Sbjct: 121 EPQNKAPTPHVFSNNGGIAGKNSGIMSPVRPLQIQETETNWVVKKTQDNETTQQFKPLEE 180

The following BLAST results are available for this feature:
BLAST of Carg04206 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022949239.11.7e-10799.48ethylene-responsive transcription factor ERF003-like [Cucurbita moschata][more]
XP_023525763.11.9e-10395.83ethylene-responsive transcription factor ERF003-like [Cucurbita pepo subsp. pepo... [more]
XP_022998174.11.7e-9994.27ethylene-responsive transcription factor ERF003-like [Cucurbita maxima][more]
XP_008454208.11.2e-6269.95PREDICTED: ethylene-responsive transcription factor ERF003-like [Cucumis melo][more]
XP_022153447.15.2e-6171.20ethylene-responsive transcription factor ERF003-like, partial [Momordica charant... [more]
BLAST of Carg04206 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G25190.18.1e-4053.85Integrase-type DNA-binding superfamily protein[more]
AT1G15360.18.4e-2173.02Integrase-type DNA-binding superfamily protein[more]
AT5G11190.18.7e-1853.76Integrase-type DNA-binding superfamily protein[more]
AT5G25390.27.4e-1737.85Integrase-type DNA-binding superfamily protein[more]
AT1G22190.18.2e-1670.00Integrase-type DNA-binding superfamily protein[more]
BLAST of Carg04206 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q94AW5|ERF03_ARATH1.5e-3853.85Ethylene-responsive transcription factor ERF003 OS=Arabidopsis thaliana OX=3702 ... [more]
sp|P16146|PZ02_LUPPO3.9e-3148.88Protein PPLZ02 OS=Lupinus polyphyllus OX=3874 GN=PPLZ02 PE=2 SV=1[more]
sp|Q9XI33|WIN1_ARATH1.5e-1973.02Ethylene-responsive transcription factor WIN1 OS=Arabidopsis thaliana OX=3702 GN... [more]
sp|Q9LFN7|SHN2_ARATH1.6e-1653.76Ethylene-responsive transcription factor SHINE 2 OS=Arabidopsis thaliana OX=3702... [more]
sp|Q3E958|SHN3_ARATH1.3e-1537.85Ethylene-responsive transcription factor SHINE 3 OS=Arabidopsis thaliana OX=3702... [more]
BLAST of Carg04206 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3BY29|A0A1S3BY29_CUCME8.2e-6369.95ethylene-responsive transcription factor ERF003-like OS=Cucumis melo OX=3656 GN=... [more]
tr|A0A0A0KVJ4|A0A0A0KVJ4_CUCSA4.2e-5965.80Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G006210 PE=4 SV=1[more]
tr|W9RS58|W9RS58_9ROSA1.1e-4354.31Ethylene-responsive transcription factor OS=Morus notabilis OX=981085 GN=L484_02... [more]
tr|A0A2C9V060|A0A2C9V060_MANES6.1e-4255.56Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_11G064200 PE=4 SV=... [more]
tr|A0A1R3J7C7|A0A1R3J7C7_9ROSI1.4e-4153.77Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_18930 PE=4 SV=1[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0003700transcription factor activity, sequence-specific DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: INTERPRO
TermDefinition
IPR016177DNA-bd_dom_sf
IPR036955AP2/ERF_dom_sf
IPR001471AP2/ERF_dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005667 transcription factor complex
molecular_function GO:0003677 DNA binding
molecular_function GO:0003700 transcription factor activity, sequence-specific DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg04206-RACarg04206-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001471AP2/ERF domainPRINTSPR00367ETHRSPELEMNTcoord: 51..67
score: 70.91
coord: 29..40
score: 66.97
IPR001471AP2/ERF domainSMARTSM00380rav1_2coord: 28..88
e-value: 1.5E-29
score: 114.2
IPR001471AP2/ERF domainPFAMPF00847AP2coord: 28..73
e-value: 1.2E-10
score: 41.4
IPR001471AP2/ERF domainPROSITEPS51032AP2_ERFcoord: 28..88
score: 18.913
IPR001471AP2/ERF domainCDDcd00018AP2coord: 27..76
e-value: 1.26767E-27
score: 100.039
IPR036955AP2/ERF domain superfamilyGENE3DG3DSA:3.30.730.10coord: 27..87
e-value: 4.4E-24
score: 86.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 124..148
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 127..142
NoneNo IPR availablePANTHERPTHR31194:SF4SUBFAMILY NOT NAMEDcoord: 22..200
NoneNo IPR availablePANTHERPTHR31194SHN SHINE , DNA BINDING / TRANSCRIPTION FACTORcoord: 22..200
IPR016177DNA-binding domain superfamilySUPERFAMILYSSF54171DNA-binding domaincoord: 28..77

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Carg04206Cla012728Watermelon (97103) v1carwmB0191
Carg04206Csa4G006210Cucumber (Chinese Long) v2carcuB0225
Carg04206MELO3C017860Melon (DHL92) v3.5.1carmeB0211
Carg04206ClCG07G012410Watermelon (Charleston Gray)carwcgB0200
Carg04206CSPI04G01770Wild cucumber (PI 183967)carcpiB0232
Carg04206Cucsa.096220Cucumber (Gy14) v1carcgyB0236
Carg04206CmaCh08G005960Cucurbita maxima (Rimu)carcmaB0284
Carg04206CmaCh01G001720Cucurbita maxima (Rimu)carcmaB0278
Carg04206CmoCh01G001790Cucurbita moschata (Rifu)carcmoB0285
Carg04206Lsi07G004380Bottle gourd (USVL1VR-Ls)carlsiB183
Carg04206Cp4.1LG02g15190Cucurbita pepo (Zucchini)carcpeB0285
Carg04206CsGy4G001700Cucumber (Gy14) v2carcgybB0214
Carg04206MELO3C017860.2Melon (DHL92) v3.6.1carmedB0216
Carg04206CsaV3_4G001740Cucumber (Chinese Long) v3carcucB0229
Carg04206Cla97C07G139210Watermelon (97103) v2carwmbB0206
Carg04206Cla97C08G157010Watermelon (97103) v2carwmbB0207
Carg04206Cla97C09G165470Watermelon (97103) v2carwmbB0209
Carg04206Bhi01G002727Wax gourdcarwgoB0246
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Carg04206Silver-seed gourdcarcarB139
Carg04206Silver-seed gourdcarcarB239
Carg04206Cucumber (Gy14) v2carcgybB0215
Carg04206Cucumber (Gy14) v1carcgyB0235
Carg04206Cucurbita maxima (Rimu)carcmaB0273
Carg04206Cucurbita maxima (Rimu)carcmaB0276
Carg04206Cucurbita maxima (Rimu)carcmaB0277
Carg04206Cucurbita moschata (Rifu)carcmoB0280
Carg04206Cucurbita moschata (Rifu)carcmoB0283
Carg04206Cucurbita moschata (Rifu)carcmoB0284
Carg04206Cucurbita pepo (Zucchini)carcpeB0280
Carg04206Cucurbita pepo (Zucchini)carcpeB0283
Carg04206Cucurbita pepo (Zucchini)carcpeB0287
Carg04206Cucurbita pepo (Zucchini)carcpeB0291
Carg04206Cucurbita pepo (Zucchini)carcpeB0292
Carg04206Wild cucumber (PI 183967)carcpiB0233
Carg04206Wild cucumber (PI 183967)carcpiB0236
Carg04206Cucumber (Chinese Long) v2carcuB0226
Carg04206Cucumber (Chinese Long) v3carcucB0230
Carg04206Bottle gourd (USVL1VR-Ls)carlsiB179
Carg04206Bottle gourd (USVL1VR-Ls)carlsiB182
Carg04206Melon (DHL92) v3.5.1carmeB0210
Carg04206Melon (DHL92) v3.6.1carmedB0215
Carg04206Watermelon (Charleston Gray)carwcgB0197
Carg04206Watermelon (Charleston Gray)carwcgB0199
Carg04206Watermelon (Charleston Gray)carwcgB0201
Carg04206Watermelon (97103) v1carwmB0189
Carg04206Watermelon (97103) v1carwmB0192
Carg04206Watermelon (97103) v1carwmB0193
Carg04206Watermelon (97103) v2carwmbB0205
Carg04206Wax gourdcarwgoB0250