Carg03839 (gene) Silver-seed gourd

Overview
NameCarg03839
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionRegulator of chromosome condensation, RCC1
LocationCucurbita_argyrosperma_scaffold_011 : 328460 .. 329104 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
TTTCTAAATGATTGAATAGTAAGCGATAGCCTTGTTTCTGGACATATCCTCGCCGTTTCCTTCTTCAATCAATTTGTGGAGTTCAATAATTAATTGAAGGAAGATTCAATGGAGTTGCAGAAGTGAATTTGAGCTATAGTAATCAGTGTTTTCGATCTTAGCCAAAGGCACAGCAGCTTTCATCAATCTCACACTGACAAATTTGATCCGTTGCGCACTCCTAAGTCTGAATTCCTACTGTTTCCCTGCTTTCGTGGCCGAAGTTTTGTGCTAGGATACGCAATGGAGGATTCCGGGACCGGAACTCGACCTTCTTCCGGTAAGGTATCGGCTAAAGTCGTCGCTATTGCTGCTGGTGAAGCTCACACTCTCGCTCTTACAGGTAGGGAGATTTTATGATTTGTGCATTTCTCTATTGCTTTTCAGTTGATATAGAATCGGAAGTTGTGACAGAGTTCTGTGTTGTGGATTGCAGGAGATGGGAGAGTGTATTCATGGGGAAGAGGAATGTTTGGGCGGCTTGGGACGGGGACGGAAGCGGACGAGATTTTACCTGTACGAGTTAAGCTTGGTTCTGAGGAAGTGAATCTCAAAGTTGTGGCGATTGCTGCTGGTTCTTATCATAGCCTCGCTCTTGCTGGTTAG

mRNA sequence

TTTCTAAATGATTGAATAGTAAGCGATAGCCTTGTTTCTGGACATATCCTCGCCGTTTCCTTCTTCAATCAATTTGTGGAGTTCAATAATTAATTGAAGGAAGATTCAATGGAGTTGCAGAAGTGAATTTGAGCTATAGTAATCAGTGTTTTCGATCTTAGCCAAAGGCACAGCAGCTTTCATCAATCTCACACTGACAAATTTGATCCGTTGCGCACTCCTAAGTCTGAATTCCTACTGTTTCCCTGCTTTCGTGGCCGAAGTTTTGTGCTAGGATACGCAATGGAGGATTCCGGGACCGGAACTCGACCTTCTTCCGGTAAGGTATCGGCTAAAGTCGTCGCTATTGCTGCTGGTGAAGCTCACACTCTCGCTCTTACAGGAGATGGGAGAGTGTATTCATGGGGAAGAGGAATGTTTGGGCGGCTTGGGACGGGGACGGAAGCGGACGAGATTTTACCTGTACGAGTTAAGCTTGGTTCTGAGGAAGTGAATCTCAAAGTTGTGGCGATTGCTGCTGGTTCTTATCATAGCCTCGCTCTTGCTGGTTAG

Coding sequence (CDS)

ATGGAGGATTCCGGGACCGGAACTCGACCTTCTTCCGGTAAGGTATCGGCTAAAGTCGTCGCTATTGCTGCTGGTGAAGCTCACACTCTCGCTCTTACAGGAGATGGGAGAGTGTATTCATGGGGAAGAGGAATGTTTGGGCGGCTTGGGACGGGGACGGAAGCGGACGAGATTTTACCTGTACGAGTTAAGCTTGGTTCTGAGGAAGTGAATCTCAAAGTTGTGGCGATTGCTGCTGGTTCTTATCATAGCCTCGCTCTTGCTGGTTAG

Protein sequence

MEDSGTGTRPSSGKVSAKVVAIAAGEAHTLALTGDGRVYSWGRGMFGRLGTGTEADEILPVRVKLGSEEVNLKVVAIAAGSYHSLALAG
Homology
[Close]
BLAST of Carg03839 vs. NCBI nr
Match: XP_022951960.1 (ultraviolet-B receptor UVR8 [Cucurbita moschata] >XP_022951961.1 ultraviolet-B receptor UVR8 [Cucurbita moschata] >XP_022951962.1 ultraviolet-B receptor UVR8 [Cucurbita moschata])

HSP 1 Score: 168.7 bits (426), Expect = 8.9e-39
Identity = 87/88 (98.86%), Postives = 88/88 (100.00%), Query Frame = 0 

Query: 1  MEDSGTGTRPSSGKVSAKVVAIAAGEAHTLALTGDGRVYSWGRGMFGRLGTGTEADEILP 60
          MEDSGTGTRPSSGKVSAKVVAIAAGEAHTLALTGDGRVYSWGRG+FGRLGTGTEADEILP
Sbjct: 1  MEDSGTGTRPSSGKVSAKVVAIAAGEAHTLALTGDGRVYSWGRGIFGRLGTGTEADEILP 60

Query: 61 VRVKLGSEEVNLKVVAIAAGSYHSLALA 89
          VRVKLGSEEVNLKVVAIAAGSYHSLALA
Sbjct: 61 VRVKLGSEEVNLKVVAIAAGSYHSLALA 88

[Close]
BLAST of Carg03839 vs. NCBI nr
Match: XP_023002287.1 (ultraviolet-B receptor UVR8 [Cucurbita maxima] >XP_023002288.1 ultraviolet-B receptor UVR8 [Cucurbita maxima] >XP_023002289.1 ultraviolet-B receptor UVR8 [Cucurbita maxima])

HSP 1 Score: 163.7 bits (413), Expect = 2.9e-37
Identity = 83/88 (94.32%), Postives = 85/88 (96.59%), Query Frame = 0 

Query: 1  MEDSGTGTRPSSGKVSAKVVAIAAGEAHTLALTGDGRVYSWGRGMFGRLGTGTEADEILP 60
          MEDSGTGTRP SGK+SAKVVAIAAGEAHTL LTGDGRVYSWGRGMFGRLGTGTEADE+LP
Sbjct: 1  MEDSGTGTRPYSGKISAKVVAIAAGEAHTLVLTGDGRVYSWGRGMFGRLGTGTEADELLP 60

Query: 61 VRVKLGSEEVNLKVVAIAAGSYHSLALA 89
          VRVKLGSEE NLKVVAIAAGSYHSLALA
Sbjct: 61 VRVKLGSEEANLKVVAIAAGSYHSLALA 88

[Close]
BLAST of Carg03839 vs. NCBI nr
Match: XP_023537385.1 (ultraviolet-B receptor UVR8 [Cucurbita pepo subsp. pepo] >XP_023537386.1 ultraviolet-B receptor UVR8 [Cucurbita pepo subsp. pepo] >XP_023537387.1 ultraviolet-B receptor UVR8 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 160.6 bits (405), Expect = 2.4e-36
Identity = 82/88 (93.18%), Postives = 85/88 (96.59%), Query Frame = 0 

Query: 1  MEDSGTGTRPSSGKVSAKVVAIAAGEAHTLALTGDGRVYSWGRGMFGRLGTGTEADEILP 60
          MEDSGTG R SSGK+SAKVVAIAAGEAHTLALTGDGRVYSWGRGMFGRLGTGTEADE+LP
Sbjct: 1  MEDSGTGIRASSGKISAKVVAIAAGEAHTLALTGDGRVYSWGRGMFGRLGTGTEADELLP 60

Query: 61 VRVKLGSEEVNLKVVAIAAGSYHSLALA 89
          VRVKLGSEE NL+VVAIAAGSYHSLALA
Sbjct: 61 VRVKLGSEEANLEVVAIAAGSYHSLALA 88

[Close]
BLAST of Carg03839 vs. NCBI nr
Match: XP_004148391.2 (PREDICTED: ultraviolet-B receptor UVR8 [Cucumis sativus] >KGN62812.1 hypothetical protein Csa_2G373550 [Cucumis sativus])

HSP 1 Score: 142.9 bits (359), Expect = 5.3e-31
Identity = 74/87 (85.06%), Postives = 79/87 (90.80%), Query Frame = 0 

Query: 1  MEDSGTGTRPSSGKVSAKVVAIAAGEAHTLALTGDGRVYSWGRGMFGRLGTGTEADEILP 60
          ME+S  GTRPSSGK+S KVVAI+AGEAHTL LTGDGRVYSWGRGMFGRLGTG E+DE+ P
Sbjct: 1  MEES--GTRPSSGKLSGKVVAISAGEAHTLVLTGDGRVYSWGRGMFGRLGTGAESDELFP 60

Query: 61 VRVKLGSEEVNLKVVAIAAGSYHSLAL 88
          VRVKLGS E NLKVVAIAAGSYHSLAL
Sbjct: 61 VRVKLGSGEENLKVVAIAAGSYHSLAL 85

[Close]
BLAST of Carg03839 vs. NCBI nr
Match: XP_008445010.1 (PREDICTED: ultraviolet-B receptor UVR8 isoform X2 [Cucumis melo])

HSP 1 Score: 141.7 bits (356), Expect = 1.2e-30
Identity = 71/83 (85.54%), Postives = 76/83 (91.57%), Query Frame = 0 

Query: 6  TGTRPSSGKVSAKVVAIAAGEAHTLALTGDGRVYSWGRGMFGRLGTGTEADEILPVRVKL 65
          +GTRPSS K+S KVV IAAGEAHT+ LTGDGRVYSWGRGMFGRLGTG E+DE+ PVRVKL
Sbjct: 4  SGTRPSSSKLSGKVVEIAAGEAHTIVLTGDGRVYSWGRGMFGRLGTGAESDELFPVRVKL 63

Query: 66 GSEEVNLKVVAIAAGSYHSLALA 89
          GSEE NLKVVAIAAGSYHSLALA
Sbjct: 64 GSEEENLKVVAIAAGSYHSLALA 86

[Close]
BLAST of Carg03839 vs. TAIR10
Match: AT5G11580.1 (Regulator of chromosome condensation (RCC1) family protein)

HSP 1 Score: 97.8 bits (242), Expect = 3.5e-21
Identity = 51/90 (56.67%), Postives = 70/90 (77.78%), Query Frame = 0 

Query: 1  MEDSGTGTRPSSGKVSAKVVAIAAGEAHTLALTGDGRVYSWGRGMFGRLGTGTEADEILP 60
          MED  + T   S  +S K++++AAGEAHT+ALTGDG VYSWGRGMFGRLGTG E+DE++P
Sbjct: 1  MEDK-SPTLLISEDLSRKIISLAAGEAHTIALTGDGCVYSWGRGMFGRLGTGKESDELVP 60

Query: 61 VRVKL--GSEEVNLKVVAIAAGSYHSLALA 89
          V V+    +E   +++V +AAG+YHSLA++
Sbjct: 61 VLVEFPNQAEGDRIRIVGVAAGAYHSLAVS 89

[Close]
BLAST of Carg03839 vs. TAIR10
Match: AT5G63860.1 (Regulator of chromosome condensation (RCC1) family protein)

HSP 1 Score: 57.8 bits (138), Expect = 4.0e-09
Identity = 27/66 (40.91%), Postives = 42/66 (63.64%), Query Frame = 0 

Query: 22  IAAGEAHTLALTGDGRVYSWGRGMFGRLGTGTEADEILPVRVKLGSEEVNLKVVAIAAGS 81
           I+ G  HT+ALT DG++Y WG   FG++G G   D+  PV+V+   ++   KVV ++ G 
Sbjct: 281 ISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFPDDQ---KVVQVSCGW 340

Query: 82  YHSLAL 88
            H+LA+
Sbjct: 341 RHTLAV 343

[Close]
BLAST of Carg03839 vs. TAIR10
Match: AT3G53830.1 (Regulator of chromosome condensation (RCC1) family protein)

HSP 1 Score: 56.2 bits (134), Expect = 1.2e-08
Identity = 30/73 (41.10%), Postives = 46/73 (63.01%), Query Frame = 0 

Query: 16  SAKVVAIAAGEAHTLALTGDGRVYSWGRGMFGRLGTGTEADEILPVRVKLGSEEVNLKVV 75
           S ++ ++AAG  HT+ ++ DG+VY++G   FG+LGTGT+  EILP R+  G         
Sbjct: 346 SVRMESVAAGLWHTICISSDGKVYAFGGNQFGQLGTGTDHAEILP-RLLDGQNLEGKHAK 405

Query: 76  AIAAGSYHSLALA 89
           A++ G+ HS  LA
Sbjct: 406 AVSCGARHSAVLA 417

[Close]
BLAST of Carg03839 vs. TAIR10
Match: AT3G02510.1 (Regulator of chromosome condensation (RCC1) family protein)

HSP 1 Score: 55.5 bits (132), Expect = 2.0e-08
Identity = 38/92 (41.30%), Postives = 54/92 (58.70%), Query Frame = 0 

Query: 5   GTG-TRPSSGKV------SAKVVAIAAGEAHTLALTGDGRVYSWGRGMFGRLGTG--TEA 64
           GTG T+P+S  V         +V IAAG  H+ ALT  G VY WGRG  GRLG G   ++
Sbjct: 229 GTGDTQPTSHPVXXXXLDDLTLVDIAAGGWHSTALTDKGEVYGWGRGEHGRLGLGDNDKS 288

Query: 65  DEILPVRVKLGSEEVNLKVVAIAAGSYHSLAL 88
            +++P +V L +EE    ++ ++ G  HS+AL
Sbjct: 289 SKMVPQKVNLLAEE---DIIQVSCGGTHSVAL 317

[Close]
BLAST of Carg03839 vs. TAIR10
Match: AT5G16040.1 (Regulator of chromosome condensation (RCC1) family protein)

HSP 1 Score: 55.5 bits (132), Expect = 2.0e-08
Identity = 33/80 (41.25%), Postives = 47/80 (58.75%), Query Frame = 0 

Query: 10  PSSGKVSAKVVAIAAGEAHTLALTGDGRVYSWGRGMFGRLGTG--TEADEILPVRVKLGS 69
           P  G     +V IAAG  H+ ALT +G VY WGRG  GRLG G   ++ ++LP +V L +
Sbjct: 241 PVQGLDDLTLVDIAAGGWHSTALTNEGEVYGWGRGEHGRLGFGDNDKSSKMLPQKVNLLA 300

Query: 70  EEVNLKVVAIAAGSYHSLAL 88
            E    ++ ++ G  HS+AL
Sbjct: 301 GE---DIIQVSCGGTHSVAL 317

[Close]
BLAST of Carg03839 vs. Swiss-Prot
Match: sp|O95714|HERC2_HUMAN (E3 ubiquitin-protein ligase HERC2 OS=Homo sapiens OX=9606 GN=HERC2 PE=1 SV=2)

HSP 1 Score: 58.9 bits (141), Expect = 3.3e-08
Identity = 34/78 (43.59%), Postives = 49/78 (62.82%), Query Frame = 0 

Query: 12  SGKVSAK-VVAIAAGEAHTLALTGDGRVYSWGRGMFGRLGTGTEADEILPVRVKLGSEEV 71
           SGK + K VV IA G  ++ A+T +G +Y+WGRG +GRLG G+  DE +P+ V   +   
Sbjct: 545 SGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLV---AGLK 604

Query: 72  NLKVVAIAAGSYHSLALA 89
            LKV+ +A GS  +  LA
Sbjct: 605 GLKVIDVACGSGDAQTLA 619

[Close]
BLAST of Carg03839 vs. Swiss-Prot
Match: sp|Q4U2R1|HERC2_MOUSE (E3 ubiquitin-protein ligase HERC2 OS=Mus musculus OX=10090 GN=Herc2 PE=1 SV=3)

HSP 1 Score: 58.9 bits (141), Expect = 3.3e-08
Identity = 34/78 (43.59%), Postives = 49/78 (62.82%), Query Frame = 0 

Query: 12  SGKVSAK-VVAIAAGEAHTLALTGDGRVYSWGRGMFGRLGTGTEADEILPVRVKLGSEEV 71
           SGK + K VV IA G  ++ A+T +G +Y+WGRG +GRLG G+  DE +P+ V   +   
Sbjct: 546 SGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLV---AGLK 605

Query: 72  NLKVVAIAAGSYHSLALA 89
            LKV+ +A GS  +  LA
Sbjct: 606 GLKVIDVACGSGDAQTLA 620

[Close]
BLAST of Carg03839 vs. Swiss-Prot
Match: sp|Q9FN03|UVR8_ARATH (Ultraviolet-B receptor UVR8 OS=Arabidopsis thaliana OX=3702 GN=UVR8 PE=1 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 7.3e-08
Identity = 27/66 (40.91%), Postives = 42/66 (63.64%), Query Frame = 0 

Query: 22  IAAGEAHTLALTGDGRVYSWGRGMFGRLGTGTEADEILPVRVKLGSEEVNLKVVAIAAGS 81
           I+ G  HT+ALT DG++Y WG   FG++G G   D+  PV+V+   ++   KVV ++ G 
Sbjct: 281 ISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFPDDQ---KVVQVSCGW 340

Query: 82  YHSLAL 88
            H+LA+
Sbjct: 341 RHTLAV 343

[Close]
BLAST of Carg03839 vs. Swiss-Prot
Match: sp|Q15751|HERC1_HUMAN (Probable E3 ubiquitin-protein ligase HERC1 OS=Homo sapiens OX=9606 GN=HERC1 PE=1 SV=2)

HSP 1 Score: 54.3 bits (129), Expect = 8.0e-07
Identity = 33/79 (41.77%), Postives = 45/79 (56.96%), Query Frame = 0 

Query: 10  PSSGKVSAKVVAIAAGEAHTLALTGDGRVYSWGRGMFGRLGTGTEADEILPVRVKLGSEE 69
           P  GKV   VV ++AG  H+ A+T DG +Y+WG G FGRLG G      +P  VK  S  
Sbjct: 507 PLQGKV---VVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS-- 566

Query: 70  VNLKVVAIAAGSYHSLALA 89
               V  ++ GS H++AL+
Sbjct: 567 ---NVGEVSCGSSHTIALS 577

[Close]
BLAST of Carg03839 vs. Swiss-Prot
Match: sp|O95199|RCBT2_HUMAN (RCC1 and BTB domain-containing protein 2 OS=Homo sapiens OX=9606 GN=RCBTB2 PE=1 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 1.8e-06
Identity = 28/78 (35.90%), Postives = 49/78 (62.82%), Query Frame = 0 

Query: 6   TGTRPSSGKVSA----KVVAIAAGEAHTLALTGDGRVYSWGRGMFGRLGTGTEADEILPV 65
           +G +P+  +V+A    +V  +A G AHTL LT +G+VY+WG   +G+LGTG ++++  P 
Sbjct: 242 SGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPT 301

Query: 66  RVKLGSEEVNLKVVAIAA 80
            V +  +    +++ IAA
Sbjct: 302 PVTVEKD----RIIEIAA 315

[Close]
BLAST of Carg03839 vs. TrEMBL
Match: tr|A0A0A0LPS2|A0A0A0LPS2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G373550 PE=4 SV=1)

HSP 1 Score: 142.9 bits (359), Expect = 3.5e-31
Identity = 74/87 (85.06%), Postives = 79/87 (90.80%), Query Frame = 0 

Query: 1  MEDSGTGTRPSSGKVSAKVVAIAAGEAHTLALTGDGRVYSWGRGMFGRLGTGTEADEILP 60
          ME+S  GTRPSSGK+S KVVAI+AGEAHTL LTGDGRVYSWGRGMFGRLGTG E+DE+ P
Sbjct: 1  MEES--GTRPSSGKLSGKVVAISAGEAHTLVLTGDGRVYSWGRGMFGRLGTGAESDELFP 60

Query: 61 VRVKLGSEEVNLKVVAIAAGSYHSLAL 88
          VRVKLGS E NLKVVAIAAGSYHSLAL
Sbjct: 61 VRVKLGSGEENLKVVAIAAGSYHSLAL 85

[Close]
BLAST of Carg03839 vs. TrEMBL
Match: tr|A0A1S3BCG0|A0A1S3BCG0_CUCME (ultraviolet-B receptor UVR8 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103488178 PE=4 SV=1)

HSP 1 Score: 141.7 bits (356), Expect = 7.7e-31
Identity = 71/83 (85.54%), Postives = 76/83 (91.57%), Query Frame = 0 

Query: 6  TGTRPSSGKVSAKVVAIAAGEAHTLALTGDGRVYSWGRGMFGRLGTGTEADEILPVRVKL 65
          +GTRPSS K+S KVV IAAGEAHT+ LTGDGRVYSWGRGMFGRLGTG E+DE+ PVRVKL
Sbjct: 4  SGTRPSSSKLSGKVVEIAAGEAHTIVLTGDGRVYSWGRGMFGRLGTGAESDELFPVRVKL 63

Query: 66 GSEEVNLKVVAIAAGSYHSLALA 89
          GSEE NLKVVAIAAGSYHSLALA
Sbjct: 64 GSEEENLKVVAIAAGSYHSLALA 86

[Close]
BLAST of Carg03839 vs. TrEMBL
Match: tr|A0A251RFA8|A0A251RFA8_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G447800 PE=4 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 7.0e-24
Identity = 61/90 (67.78%), Postives = 70/90 (77.78%), Query Frame = 0 

Query: 3  DSGTGTRPSSGKVSAKVVAIAAGEAHTLALTGDGRVYSWGRGMFGRLGTGTEADEILPVR 62
          D  + T P+ G +S KVV +AAGEAHTLALTGDG VYSWGRGMFGRLGTG EADE+ PVR
Sbjct: 2  DEESATLPNGGSLSRKVVTVAAGEAHTLALTGDGFVYSWGRGMFGRLGTGAEADELFPVR 61

Query: 63 VKL----GSEEVNLKVVAIAAGSYHSLALA 89
          +K      +EE  LK+V +AAGSYHSLALA
Sbjct: 62 IKFNDPRSAEERRLKLVGVAAGSYHSLALA 91

[Close]
BLAST of Carg03839 vs. TrEMBL
Match: tr|A0A1U8P3I6|A0A1U8P3I6_GOSHI (ultraviolet-B receptor UVR8 OS=Gossypium hirsutum OX=3635 GN=LOC107953844 PE=4 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 1.6e-23
Identity = 60/86 (69.77%), Postives = 71/86 (82.56%), Query Frame = 0 

Query: 3  DSGTGTRPSSGKVSAKVVAIAAGEAHTLALTGDGRVYSWGRGMFGRLGTGTEADEILPVR 62
          +S  GT   SG +  KVVA+AAGEAHTLAL+GDG VYSWGRGMFGRLGTG+E+DEI PVR
Sbjct: 2  ESAAGTADDSGNMPHKVVAVAAGEAHTLALSGDGYVYSWGRGMFGRLGTGSESDEIFPVR 61

Query: 63 VKLGSEEVNLKVVAIAAGSYHSLALA 89
          VK  + E  LK++A+AAG+YHSLALA
Sbjct: 62 VKFQNSE--LKLIAVAAGAYHSLALA 85

[Close]
BLAST of Carg03839 vs. TrEMBL
Match: tr|A0A0D2PKW1|A0A0D2PKW1_GOSRA (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_001G026900 PE=4 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 1.6e-23
Identity = 60/86 (69.77%), Postives = 71/86 (82.56%), Query Frame = 0 

Query: 3  DSGTGTRPSSGKVSAKVVAIAAGEAHTLALTGDGRVYSWGRGMFGRLGTGTEADEILPVR 62
          +S  GT   SG +  KVVA+AAGEAHTLAL+GDG VYSWGRGMFGRLGTG+E+DEI PVR
Sbjct: 2  ESAAGTADDSGNMPHKVVAVAAGEAHTLALSGDGYVYSWGRGMFGRLGTGSESDEIFPVR 61

Query: 63 VKLGSEEVNLKVVAIAAGSYHSLALA 89
          VK  + E  LK++A+AAG+YHSLALA
Sbjct: 62 VKFQNSE--LKLIAVAAGAYHSLALA 85

The following BLAST results are available for this feature:
BLAST of Carg03839 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022951960.18.9e-3998.86ultraviolet-B receptor UVR8 [Cucurbita moschata] >XP_022951961.1 ultraviolet-B r... [more]
XP_023002287.12.9e-3794.32ultraviolet-B receptor UVR8 [Cucurbita maxima] >XP_023002288.1 ultraviolet-B rec... [more]
XP_023537385.12.4e-3693.18ultraviolet-B receptor UVR8 [Cucurbita pepo subsp. pepo] >XP_023537386.1 ultravi... [more]
XP_004148391.25.3e-3185.06PREDICTED: ultraviolet-B receptor UVR8 [Cucumis sativus] >KGN62812.1 hypothetica... [more]
XP_008445010.11.2e-3085.54PREDICTED: ultraviolet-B receptor UVR8 isoform X2 [Cucumis melo][more]
BLAST of Carg03839 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G11580.13.5e-2156.67Regulator of chromosome condensation (RCC1) family protein[more]
AT5G63860.14.0e-0940.91Regulator of chromosome condensation (RCC1) family protein[more]
AT3G53830.11.2e-0841.10Regulator of chromosome condensation (RCC1) family protein[more]
AT3G02510.12.0e-0841.30Regulator of chromosome condensation (RCC1) family protein[more]
AT5G16040.12.0e-0841.25Regulator of chromosome condensation (RCC1) family protein[more]
BLAST of Carg03839 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|O95714|HERC2_HUMAN3.3e-0843.59E3 ubiquitin-protein ligase HERC2 OS=Homo sapiens OX=9606 GN=HERC2 PE=1 SV=2[more]
sp|Q4U2R1|HERC2_MOUSE3.3e-0843.59E3 ubiquitin-protein ligase HERC2 OS=Mus musculus OX=10090 GN=Herc2 PE=1 SV=3[more]
sp|Q9FN03|UVR8_ARATH7.3e-0840.91Ultraviolet-B receptor UVR8 OS=Arabidopsis thaliana OX=3702 GN=UVR8 PE=1 SV=1[more]
sp|Q15751|HERC1_HUMAN8.0e-0741.77Probable E3 ubiquitin-protein ligase HERC1 OS=Homo sapiens OX=9606 GN=HERC1 PE=1... [more]
sp|O95199|RCBT2_HUMAN1.8e-0635.90RCC1 and BTB domain-containing protein 2 OS=Homo sapiens OX=9606 GN=RCBTB2 PE=1 ... [more]
BLAST of Carg03839 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0LPS2|A0A0A0LPS2_CUCSA3.5e-3185.06Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G373550 PE=4 SV=1[more]
tr|A0A1S3BCG0|A0A1S3BCG0_CUCME7.7e-3185.54ultraviolet-B receptor UVR8 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103488178 P... [more]
tr|A0A251RFA8|A0A251RFA8_PRUPE7.0e-2467.78Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G447800 PE=4 SV=1[more]
tr|A0A1U8P3I6|A0A1U8P3I6_GOSHI1.6e-2369.77ultraviolet-B receptor UVR8 OS=Gossypium hirsutum OX=3635 GN=LOC107953844 PE=4 S... [more]
tr|A0A0D2PKW1|A0A0D2PKW1_GOSRA1.6e-2369.77Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_001G026900 PE=4 ... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR009091RCC1/BLIP-II
IPR000408Reg_chr_condens
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg03839-RACarg03839-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000408Regulator of chromosome condensation, RCC1PFAMPF00415RCC1coord: 35..87
e-value: 3.2E-16
score: 59.6
IPR000408Regulator of chromosome condensation, RCC1PROSITEPS50012RCC1_3coord: 36..89
score: 17.037
IPR009091Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein IIGENE3DG3DSA:2.130.10.30coord: 3..89
e-value: 6.0E-23
score: 83.2
IPR009091Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein IISUPERFAMILYSSF50985RCC1/BLIP-IIcoord: 15..87
NoneNo IPR availablePANTHERPTHR22870:SF319SECRETION-REGULATING GUANINE NUCLEOTIDE EXCHANGE FACTORcoord: 17..87
NoneNo IPR availablePANTHERPTHR22870REGULATOR OF CHROMOSOME CONDENSATIONcoord: 17..87