Carg03276 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg03276
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	glutamic acid-rich protein
Location	Cucurbita_argyrosperma_scaffold_005 : 1021306 .. 1022367 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGACCGTCACCGGAAGTATCGTTTCTTCGAAGCCAATCTCTATCTCAAAAGCGGCGTCCACTCTCTCCTCCTTTCTCTCCGTCGACAATGGCGCTTCGAAAGCAATTTGCGCCTATCTGAGACGCGCCTCCGCCTCTTTCAACGAGTTAAAGCAGCTCCACAAGGAGTTGAAATCTTCGCGATCTGATCGGAAGCACCGGCATCACGGATCCGAGGCTTCAAACGATCCAGAGGCTTCCAGAGATAATCCACATTGGATTGAAGACGGCGAGAAGAAAAATCCTCTGTATCTAAGAGCTAAAGTTGGAAGAAGCGGTAAGCCGAGTTTTAATGTTCAATCTGAGGATGGGAAGGATGGGAAGACGGAAAAGGAAAGCGGTGGGAATGGTGATTTTGAGGATGCATCGGGTGAATATCGGAAGAGAAAGGTCGAGGACTTGAAGACTGAAATTGAAGATAAACCTAACCGAAAAGTAGAGATGGATGTGGAATCAAGTGATAAAGATAAGAGCGTTGTAGCAGTTGAGACAAAAAGAAAAAAGCACAAGAAAAAGAGCGAGGATAGACACGCTAAGATCGAAGATGACGAACGCGAGAATGGAGCCAGGCGAAGTTACAGTAAATCGCGAATTAGCGATAATAATGGCGAAATTGAAGCTTCTGGGAAGTTCGTCGAGAACAATATCGCAAGCGGAAAAGATAGAAAGAAGCACGAGGACAAGAAGAGTTTGGTTGACGATAAGGATCAAGTAAAGAGTGAAGGTCAGAGAAGAAGAGACGCCGAGGAGGAAAAGAGCACAAACAAGGATAATGATGATGGAGCAGAATCGACCAAGAAGAAAAAGAAGAAGAAGAAGAAGAAGAACAGGGAAGAAGAAGATGACGATTTTCAGAACAACAGTGGAGGAGCTATGGTGAAAGAGGAAATTCCAGTTTCGGATGACAAAGAGTTGAAAAGGAAAGAGAAGAAAAAAAGGAAGAATCGAGGTTTAGAAGAAGGGGGTGATGATGGGTCCGAGGAACAACAGCGTACGAAGAGAAGAAAAGGAAATTTATGA

mRNA sequence

ATGAAGACCGTCACCGGAAGTATCGTTTCTTCGAAGCCAATCTCTATCTCAAAAGCGGCGTCCACTCTCTCCTCCTTTCTCTCCGTCGACAATGGCGCTTCGAAAGCAATTTGCGCCTATCTGAGACGCGCCTCCGCCTCTTTCAACGAGTTAAAGCAGCTCCACAAGGAGTTGAAATCTTCGCGATCTGATCGGAAGCACCGGCATCACGGATCCGAGGCTTCAAACGATCCAGAGGCTTCCAGAGATAATCCACATTGGATTGAAGACGGCGAGAAGAAAAATCCTCTGTATCTAAGAGCTAAAGTTGGAAGAAGCGGTAAGCCGAGTTTTAATGTTCAATCTGAGGATGGGAAGGATGGGAAGACGGAAAAGGAAAGCGGTGGGAATGGTGATTTTGAGGATGCATCGGGTGAATATCGGAAGAGAAAGGTCGAGGACTTGAAGACTGAAATTGAAGATAAACCTAACCGAAAAGTAGAGATGGATGTGGAATCAAGTGATAAAGATAAGAGCGTTGTAGCAGTTGAGACAAAAAGAAAAAAGCACAAGAAAAAGAGCGAGGATAGACACGCTAAGATCGAAGATGACGAACGCGAGAATGGAGCCAGGCGAAGTTACAGTAAATCGCGAATTAGCGATAATAATGGCGAAATTGAAGCTTCTGGGAAGTTCGTCGAGAACAATATCGCAAGCGGAAAAGATAGAAAGAAGCACGAGGACAAGAAGAGTTTGGTTGACGATAAGGATCAAGTAAAGAGTGAAGGTCAGAGAAGAAGAGACGCCGAGGAGGAAAAGAGCACAAACAAGGATAATGATGATGGAGCAGAATCGACCAAGAAGAAAAAGAAGAAGAAGAAGAAGAAGAACAGGGAAGAAGAAGATGACGATTTTCAGAACAACAGTGGAGGAGCTATGGTGAAAGAGGAAATTCCAGTTTCGGATGACAAAGAGTTGAAAAGGAAAGAGAAGAAAAAAAGGAAGAATCGAGGTTTAGAAGAAGGGGGTGATGATGGGTCCGAGGAACAACAGCGTACGAAGAGAAGAAAAGGAAATTTATGA

Coding sequence (CDS)

ATGAAGACCGTCACCGGAAGTATCGTTTCTTCGAAGCCAATCTCTATCTCAAAAGCGGCGTCCACTCTCTCCTCCTTTCTCTCCGTCGACAATGGCGCTTCGAAAGCAATTTGCGCCTATCTGAGACGCGCCTCCGCCTCTTTCAACGAGTTAAAGCAGCTCCACAAGGAGTTGAAATCTTCGCGATCTGATCGGAAGCACCGGCATCACGGATCCGAGGCTTCAAACGATCCAGAGGCTTCCAGAGATAATCCACATTGGATTGAAGACGGCGAGAAGAAAAATCCTCTGTATCTAAGAGCTAAAGTTGGAAGAAGCGGTAAGCCGAGTTTTAATGTTCAATCTGAGGATGGGAAGGATGGGAAGACGGAAAAGGAAAGCGGTGGGAATGGTGATTTTGAGGATGCATCGGGTGAATATCGGAAGAGAAAGGTCGAGGACTTGAAGACTGAAATTGAAGATAAACCTAACCGAAAAGTAGAGATGGATGTGGAATCAAGTGATAAAGATAAGAGCGTTGTAGCAGTTGAGACAAAAAGAAAAAAGCACAAGAAAAAGAGCGAGGATAGACACGCTAAGATCGAAGATGACGAACGCGAGAATGGAGCCAGGCGAAGTTACAGTAAATCGCGAATTAGCGATAATAATGGCGAAATTGAAGCTTCTGGGAAGTTCGTCGAGAACAATATCGCAAGCGGAAAAGATAGAAAGAAGCACGAGGACAAGAAGAGTTTGGTTGACGATAAGGATCAAGTAAAGAGTGAAGGTCAGAGAAGAAGAGACGCCGAGGAGGAAAAGAGCACAAACAAGGATAATGATGATGGAGCAGAATCGACCAAGAAGAAAAAGAAGAAGAAGAAGAAGAAGAACAGGGAAGAAGAAGATGACGATTTTCAGAACAACAGTGGAGGAGCTATGGTGAAAGAGGAAATTCCAGTTTCGGATGACAAAGAGTTGAAAAGGAAAGAGAAGAAAAAAAGGAAGAATCGAGGTTTAGAAGAAGGGGGTGATGATGGGTCCGAGGAACAACAGCGTACGAAGAGAAGAAAAGGAAATTTATGA

Protein sequence

MKTVTGSIVSSKPISISKAASTLSSFLSVDNGASKAICAYLRRASASFNELKQLHKELKSSRSDRKHRHHGSEASNDPEASRDNPHWIEDGEKKNPLYLRAKVGRSGKPSFNVQSEDGKDGKTEKESGGNGDFEDASGEYRKRKVEDLKTEIEDKPNRKVEMDVESSDKDKSVVAVETKRKKHKKKSEDRHAKIEDDERENGARRSYSKSRISDNNGEIEASGKFVENNIASGKDRKKHEDKKSLVDDKDQVKSEGQRRRDAEEEKSTNKDNDDGAESTKKKKKKKKKKNREEEDDDFQNNSGGAMVKEEIPVSDDKELKRKEKKKRKNRGLEEGGDDGSEEQQRTKRRKGNL

Homology

[Close]

BLAST of Carg03276 vs. NCBI nr
Match: XP_022943393.1 (glutamic acid-rich protein-like [Cucurbita moschata] >XP_022943394.1 glutamic acid-rich protein-like [Cucurbita moschata] >XP_022943395.1 glutamic acid-rich protein-like [Cucurbita moschata] >XP_022943397.1 glutamic acid-rich protein-like [Cucurbita moschata] >XP_022943398.1 glutamic acid-rich protein-like [Cucurbita moschata])

HSP 1 Score: 373.6 bits (958), Expect = 7.3e-100
Identity = 209/239 (87.45%), Postives = 211/239 (88.28%), Query Frame = 0


Query: 1   MKTVTGSIVSSKPISISKAASTLSSFLSVDNGASKAICAYLRRASASFNELKQLHKELKS 60
           MKTVTGSIVSSKPISISKAASTLSSFLSVDNGASKAICAYLRRASASFNELKQLHKELKS
Sbjct: 1   MKTVTGSIVSSKPISISKAASTLSSFLSVDNGASKAICAYLRRASASFNELKQLHKELKS 60

Query: 61  SRSDRKHRHHGSEASNDPEASRDNPHWIEDGEKKNPLYLRAKVGRSGKPSFNVQSEDGKD 120
           SRSDRKHRHHGSEASNDPEASR NPHWIED EKKNPLYLRAK GRSGKPSFNVQSEDGKD
Sbjct: 61  SRSDRKHRHHGSEASNDPEASRGNPHWIEDDEKKNPLYLRAKDGRSGKPSFNVQSEDGKD 120

Query: 121 GKTEKESGGNGDFEDASGEYRKRKVEDLKTEIEDKPNRKVEMDVXXXXXXXXXXXXXXXX 180
           GKTEKESGG+GDFEDASGEYRKRKV DLKTEIEDKPNRKVEMDV                
Sbjct: 121 GKTEKESGGSGDFEDASGEYRKRKVGDLKTEIEDKPNRKVEMDVESSDKDKSVVAVEKKG 180

Query: 181 XXXXXXXXXRHAKIEDDERENGARRSYSKSRISDNNGEIEASGKFVENNIASGKDRKKH 240
               XX   RHAKIEDDERE+GARRSYSKSR SDNNGEIEASGKFVENNIASGKDRKKH
Sbjct: 181 KKHKXXSEDRHAKIEDDEREDGARRSYSKSRNSDNNGEIEASGKFVENNIASGKDRKKH 239

[Close]

BLAST of Carg03276 vs. NCBI nr
Match: XP_022986894.1 (cylicin-1-like [Cucurbita maxima] >XP_022986895.1 cylicin-1-like [Cucurbita maxima] >XP_022986896.1 cylicin-1-like [Cucurbita maxima])

HSP 1 Score: 347.1 bits (889), Expect = 7.3e-92
Identity = 197/239 (82.43%), Postives = 201/239 (84.10%), Query Frame = 0


Query: 1   MKTVTGSIVSSKPISISKAASTLSSFLSVDNGASKAICAYLRRASASFNELKQLHKELKS 60
           MKTVTGSIVSSKPISISKAASTLSSFLSVDNGASKAICAYLRRASASFNELKQLHKELKS
Sbjct: 1   MKTVTGSIVSSKPISISKAASTLSSFLSVDNGASKAICAYLRRASASFNELKQLHKELKS 60

Query: 61  SRSDRKHRHHGSEASNDPEASRDNPHWIEDGEKKNPLYLRAKVGRSGKPSFNVQSEDGKD 120
           SRSDRKHRHHGSEASNDPEA+RDNP WIEDGEKKNPLYLRAK G+SGK S NVQSE   D
Sbjct: 61  SRSDRKHRHHGSEASNDPEAARDNPQWIEDGEKKNPLYLRAKDGKSGKTSLNVQSE---D 120

Query: 121 GKTEKESGGNGDFEDASGEYRKRKVEDLKTEIEDKPNRKVEMDVXXXXXXXXXXXXXXXX 180
           GK EKESGGNGDFEDASGEYRKRKVEDLKTEIEDKPNRKVEMDV                
Sbjct: 121 GKAEKESGGNGDFEDASGEYRKRKVEDLKTEIEDKPNRKVEMDVESSDKDKSVVAVEKKG 180

Query: 181 XXXXXXXXXRHAKIEDDERENGARRSYSKSRISDNNGEIEASGKFVENNIASGKDRKKH 240
                    R+AKIEDDE + GARRS SKSR SDNNGEIEAS KFVENNIASGKDRKKH
Sbjct: 181 KKHQKKSEDRYAKIEDDEHKAGARRSSSKSRNSDNNGEIEASAKFVENNIASGKDRKKH 236

[Close]

BLAST of Carg03276 vs. NCBI nr
Match: XP_023511985.1 (DNA topoisomerase 1-like [Cucurbita pepo subsp. pepo] >XP_023511986.1 DNA topoisomerase 1-like [Cucurbita pepo subsp. pepo] >XP_023511987.1 DNA topoisomerase 1-like [Cucurbita pepo subsp. pepo] >XP_023511988.1 DNA topoisomerase 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 335.1 bits (858), Expect = 2.9e-88
Identity = 202/239 (84.52%), Postives = 205/239 (85.77%), Query Frame = 0


Query: 1   MKTVTGSIVSSKPISISKAASTLSSFLSVDNGASKAICAYLRRASASFNELKQLHKELKS 60
           MKTVTGSIVSSKPISISKAASTLSSFLSVDNGASKAICAYLRRASASFNELKQLHKELKS
Sbjct: 1   MKTVTGSIVSSKPISISKAASTLSSFLSVDNGASKAICAYLRRASASFNELKQLHKELKS 60

Query: 61  SRSDRKHRHHGSEASNDPEASRDNPHWIEDGEKKNPLYLRAKVGRSGKPSFNVQSEDGKD 120
           SRSDR HRHHGSEASNDPEA R NPHWIEDGEKKN  YLR K GRSGKPS NVQSEDG+D
Sbjct: 61  SRSDRXHRHHGSEASNDPEAPRVNPHWIEDGEKKNLEYLREKDGRSGKPSLNVQSEDGQD 120

Query: 121 GKTEKESGGNGDFEDASGEYRKRKVEDLKTEIEDKPNRKVEMDVXXXXXXXXXXXXXXXX 180
           GKTE +SGGNGDFEDASGEYRKRKVEDLKTEIEDKPNRKVEMDV              XX
Sbjct: 121 GKTETKSGGNGDFEDASGEYRKRKVEDLKTEIEDKPNRKVEMDVESSDKDKSVVAVEKXX 180

Query: 181 XXXXXXXXXRHAKIEDDERENGARRSYSKSRISDNNGEIEASGKFVENNIASGKDRKKH 240
           XXXXXXXXX        E E GARRSYSKSR SDNNGEIEASGKFVEN+IASGKDRKKH
Sbjct: 181 XXXXXXXXXXXXXXXXXEHEAGARRSYSKSRNSDNNGEIEASGKFVENSIASGKDRKKH 239

[Close]

BLAST of Carg03276 vs. NCBI nr
Match: XP_008463862.1 (PREDICTED: glutamic acid-rich protein [Cucumis melo])

HSP 1 Score: 221.9 bits (564), Expect = 3.5e-54
Identity = 157/245 (64.08%), Postives = 178/245 (72.65%), Query Frame = 0


Query: 1   MKTVTGSIVSSKPISISKAASTLSSFLSVDNGASKAICAYLRRASASFNELKQLHKELKS 60
           MKTVTGS+VSSKPISISKAASTLSSFLS DNGASKA+CAYLRRAS SFNELK LHKELKS
Sbjct: 1   MKTVTGSVVSSKPISISKAASTLSSFLSADNGASKALCAYLRRASDSFNELKHLHKELKS 60

Query: 61  SRSDRKHRHHGSEASNDPEASRDNPHWIEDGEKKNPLYLR------AKVGRSGKPSFNVQ 120
           S S RKH HHGS+ SN+ EA+ DN + +EDG+KKN           +K   + K S  VQ
Sbjct: 61  SPSVRKHLHHGSKVSNEFEAAMDNEYRVEDGDKKNSSVSEKKKRPDSKYRTTDKTSLRVQ 120

Query: 121 SEDGKDGKTEKESGGNGDFEDASGEYRKRKVEDLKTEIEDKPNRKVEMDVXXXXXXXXXX 180
           S+D + GKT  E+GGNG+ ED SG   KRK   LK EIEDKP+ KVEMDV         X
Sbjct: 121 SDDEQSGKTAMENGGNGNLEDVSG---KRKGGGLKIEIEDKPSGKVEMDV----ESSDVX 180

Query: 181 XXXXXXXXXXXXXXXRHAKIEDDERENGARRSYSKSRISDNN-GEIEASGKFVENNIASG 239
           XXXXXXXXXXXX   RH  IEDDERE+GAR  + KS+ +DNN    EASG+FVENN+A G
Sbjct: 181 XXXXXXXXXXXXSEDRHGDIEDDERESGARLKHGKSQNTDNNCDNAEASGEFVENNVAKG 238

[Close]

BLAST of Carg03276 vs. NCBI nr
Match: XP_022947113.1 (DEAD-box ATP-dependent RNA helicase 42-like isoform X1 [Cucurbita moschata] >XP_022947114.1 DEAD-box ATP-dependent RNA helicase 42-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 203.4 bits (516), Expect = 1.3e-48
Identity = 140/239 (58.58%), Postives = 169/239 (70.71%), Query Frame = 0


Query: 1   MKTVTGSIVSSKPISISKAASTLSSFLSVDNGASKAICAYLRRASASFNELKQLHKELKS 60
           MKT+TG++VSSKPIS+SKAASTLSSFLSVDNGASKA+CAYLRRASASFNELKQLHK+LKS
Sbjct: 1   MKTITGNVVSSKPISLSKAASTLSSFLSVDNGASKALCAYLRRASASFNELKQLHKDLKS 60

Query: 61  SRSDRKHRHHGSEASNDPEASRDNPHWIEDGEKKNPLYLRAKVGRSGKPSFNVQSEDGKD 120
           SRSDR  RHHG E S+  EA+ D+ H IE+GE+       +K G+  +        + +D
Sbjct: 61  SRSDRNPRHHGFEVSSGLEAAVDSSHRIENGERIKSSVNESKSGKKRREXXXXXXNE-QD 120

Query: 121 GKTEKESGGNGDFEDASGEYRKRKVEDLKTEIEDKPNRKVEMDVXXXXXXXXXXXXXXXX 180
           GKT   SGGNGDFED  GE  KR+ ++LKTEIE+KP+R+VE+DV            XXXX
Sbjct: 121 GKTAMASGGNGDFEDVVGEDGKRRSDELKTEIEEKPSRRVEVDVKSSDRDESVVGIXXXX 180

Query: 181 XXXXXXXXXRHAKIEDDERENGARRSYSKSRISDNNGEIEASGKFVENNIASGKDRKKH 240
           XXXXXXXXX       +       +SY KS+ S NNGE EA+  F+ENN+  GKDRKKH
Sbjct: 181 XXXXXXXXXXXXXXXXE-----VGQSYGKSQTSANNGETEATEDFIENNVGRGKDRKKH 233

[Close]

BLAST of Carg03276 vs. TAIR10
Match: AT5G60030.1 (unknown protein)

HSP 1 Score: 74.7 bits (182), Expect = 1.3e-13
Identity = 40/63 (63.49%), Postives = 50/63 (79.37%), Query Frame = 0


Query: 1  MKTVTGSIVSSKPISISKAASTLSSFLSVDNGASKAICAYLRRASASFNELKQLHKELKS 60
          MKTVTG +VS++PIS+SKAA  LS F S DNGAS+ + AYLRRASA+F ELK  H+E+KS
Sbjct: 1  MKTVTGRVVSAEPISLSKAAKLLSGFASSDNGASQDVSAYLRRASAAFTELKSFHREIKS 60

Query: 61 SRS 64
            +
Sbjct: 61 KET 63

[Close]

BLAST of Carg03276 vs. TAIR10
Match: AT1G75335.1 (unknown protein)

HSP 1 Score: 71.2 bits (173), Expect = 1.4e-12
Identity = 38/63 (60.32%), Postives = 51/63 (80.95%), Query Frame = 0


Query: 1  MKTVTGSIVSSKPISISKAASTLSSFLSVDNGASKAICAYLRRASASFNELKQLHKELKS 60
          MKTVTG + S+KPIS+SKAA+ LS F+S +NGAS+ + AYLRRAS +F ELK +H+E+KS
Sbjct: 1  MKTVTGRVNSAKPISLSKAATLLSGFVSSENGASQDVSAYLRRASGAFIELKSIHREIKS 60

Query: 61 SRS 64
            +
Sbjct: 61 KET 63

[Close]

BLAST of Carg03276 vs. TrEMBL
Match: tr|A0A1S3CK97|A0A1S3CK97_CUCME (glutamic acid-rich protein OS=Cucumis melo OX=3656 GN=LOC103501895 PE=4 SV=1)

HSP 1 Score: 221.9 bits (564), Expect = 2.3e-54
Identity = 157/245 (64.08%), Postives = 178/245 (72.65%), Query Frame = 0


Query: 1   MKTVTGSIVSSKPISISKAASTLSSFLSVDNGASKAICAYLRRASASFNELKQLHKELKS 60
           MKTVTGS+VSSKPISISKAASTLSSFLS DNGASKA+CAYLRRAS SFNELK LHKELKS
Sbjct: 1   MKTVTGSVVSSKPISISKAASTLSSFLSADNGASKALCAYLRRASDSFNELKHLHKELKS 60

Query: 61  SRSDRKHRHHGSEASNDPEASRDNPHWIEDGEKKNPLYLR------AKVGRSGKPSFNVQ 120
           S S RKH HHGS+ SN+ EA+ DN + +EDG+KKN           +K   + K S  VQ
Sbjct: 61  SPSVRKHLHHGSKVSNEFEAAMDNEYRVEDGDKKNSSVSEKKKRPDSKYRTTDKTSLRVQ 120

Query: 121 SEDGKDGKTEKESGGNGDFEDASGEYRKRKVEDLKTEIEDKPNRKVEMDVXXXXXXXXXX 180
           S+D + GKT  E+GGNG+ ED SG   KRK   LK EIEDKP+ KVEMDV         X
Sbjct: 121 SDDEQSGKTAMENGGNGNLEDVSG---KRKGGGLKIEIEDKPSGKVEMDV----ESSDVX 180

Query: 181 XXXXXXXXXXXXXXXRHAKIEDDERENGARRSYSKSRISDNN-GEIEASGKFVENNIASG 239
           XXXXXXXXXXXX   RH  IEDDERE+GAR  + KS+ +DNN    EASG+FVENN+A G
Sbjct: 181 XXXXXXXXXXXXSEDRHGDIEDDERESGARLKHGKSQNTDNNCDNAEASGEFVENNVAKG 238

[Close]

BLAST of Carg03276 vs. TrEMBL
Match: tr|A0A0A0KCS1|A0A0A0KCS1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G301030 PE=4 SV=1)

HSP 1 Score: 200.7 bits (509), Expect = 5.6e-48
Identity = 148/244 (60.66%), Postives = 173/244 (70.90%), Query Frame = 0


Query: 1   MKTVTGSIVSSKPISISKAASTLSSFLSVDNGASKAICAYLRRASASFNELKQLHKELKS 60
           MKTV GS+VSSKPISISKAASTLSSFLS DNGASKA+CAYLRRAS SFNELKQLHKELKS
Sbjct: 1   MKTVNGSVVSSKPISISKAASTLSSFLSADNGASKALCAYLRRASDSFNELKQLHKELKS 60

Query: 61  SRSDRKHRHHGSEASNDPEASRDNPHWIEDGEKKNPLYLRAKV------GRSGKPSFNVQ 120
           S S RKH HHGSE SN+ EA+  + + +EDG+K N      K         + K S  VQ
Sbjct: 61  SCSVRKHLHHGSEVSNEFEAAIHDQYRVEDGDKNNSSVSEKKKRPDRKDRTTDKTSLRVQ 120

Query: 121 SEDGKDGKTEKESGGNGDFEDASGEYRKRKVEDLKTEIEDKPNRKVEMDVXXXXXXXXXX 180
           S + + GKT  E+GGNG+ ED +G   K+K  +LK EIEDKP+ KVEMDV         X
Sbjct: 121 SYNEQIGKTPMENGGNGNLEDVTG---KKKGSELKIEIEDKPSGKVEMDVESSDRDKSVX 180

Query: 181 XXXXXXXXXXXXXXXRHAKIEDDERENGARRSYSKSRISDNNGEIEASGKFVENNIASGK 239
           XXXXXXXXXXXXXXX         RE+GAR  + KS+ +DNN + EASG+FVENN+A+GK
Sbjct: 181 XXXXXXXXXXXXXXXXXXXXXXXXRESGARLKHGKSQNTDNNCDAEASGEFVENNVANGK 240

[Close]

BLAST of Carg03276 vs. TrEMBL
Match: tr|A0A2P5CIF3|A0A2P5CIF3_PARAD (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_149560 PE=4 SV=1)

HSP 1 Score: 90.9 bits (224), Expect = 6.2e-15
Identity = 50/77 (64.94%), Postives = 64/77 (83.12%), Query Frame = 0


Query: 1  MKTVTGSIVSSKPISISKAASTLSSFLSVDNGASKAICAYLRRASASFNELKQLHKELKS 60
          MK V+G+++SSKPIS+SKA S LS+F+S + GAS A+ AYLRR+ ASF ELKQLHKELK 
Sbjct: 1  MKAVSGTVISSKPISLSKATSILSTFVSTETGASLAMGAYLRRSLASFKELKQLHKELKI 60

Query: 61 SRSDRKHRHHGSEASND 78
          +RS+RK + HGSEA+ D
Sbjct: 61 NRSERKQKRHGSEAAED 77

[Close]

BLAST of Carg03276 vs. TrEMBL
Match: tr|A0A061GZI3|A0A061GZI3_THECC (Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_041081 PE=4 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 1.8e-14
Identity = 51/76 (67.11%), Postives = 62/76 (81.58%), Query Frame = 0


Query: 1  MKTVTGSIVSSKPISISKAASTLSSFLSVDNGASKAICAYLRRASASFNELKQLHKEL-K 60
          MKT TG I+SS PIS+SKA   +S+F + DNGAS+A+ AYLRRASASFNELKQLH+EL K
Sbjct: 1  MKTATGKILSSTPISVSKATKIISNFAATDNGASQAVSAYLRRASASFNELKQLHRELRK 60

Query: 61 SSRSDRKHRHHGSEAS 76
           S+SDRKH+   SEA+
Sbjct: 61 QSKSDRKHKKSKSEAA 76

[Close]

BLAST of Carg03276 vs. TrEMBL
Match: tr|A0A1R3HB71|A0A1R3HB71_COCAP (Uncharacterized protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_20433 PE=4 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 3.1e-14
Identity = 53/76 (69.74%), Postives = 62/76 (81.58%), Query Frame = 0


Query: 1  MKTVTGSIVSSKPISISKAASTLSSFLSVDNGASKAICAYLRRASASFNELKQLHKEL-K 60
          MKTVTG I+SS PIS+SKAA T++ F + DNGAS AI AYLRRASA FNELKQLHKEL +
Sbjct: 1  MKTVTGKILSSTPISVSKAARTIAKFAATDNGASLAISAYLRRASAGFNELKQLHKELQR 60

Query: 61 SSRSDRKHRHHGSEAS 76
          SS+SDRK +   SEA+
Sbjct: 61 SSKSDRKDKKSKSEAT 76

The following BLAST results are available for this feature:

BLAST of Carg03276 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022943393.1	7.3e-100	87.45	glutamic acid-rich protein-like [Cucurbita moschata] >XP_022943394.1 glutamic ac...	[more]
XP_022986894.1	7.3e-92	82.43	cylicin-1-like [Cucurbita maxima] >XP_022986895.1 cylicin-1-like [Cucurbita maxi...	[more]
XP_023511985.1	2.9e-88	84.52	DNA topoisomerase 1-like [Cucurbita pepo subsp. pepo] >XP_023511986.1 DNA topois...	[more]
XP_008463862.1	3.5e-54	64.08	PREDICTED: glutamic acid-rich protein [Cucumis melo]	[more]
XP_022947113.1	1.3e-48	58.58	DEAD-box ATP-dependent RNA helicase 42-like isoform X1 [Cucurbita moschata] >XP_...	[more]

BLAST of Carg03276 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G60030.1	1.3e-13	63.49	unknown protein	[more]
AT1G75335.1	1.4e-12	60.32	unknown protein	[more]

BLAST of Carg03276 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Carg03276 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3CK97\|A0A1S3CK97_CUCME	2.3e-54	64.08	glutamic acid-rich protein OS=Cucumis melo OX=3656 GN=LOC103501895 PE=4 SV=1	[more]
tr\|A0A0A0KCS1\|A0A0A0KCS1_CUCSA	5.6e-48	60.66	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G301030 PE=4 SV=1	[more]
tr\|A0A2P5CIF3\|A0A2P5CIF3_PARAD	6.2e-15	64.94	Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_149560 PE...	[more]
tr\|A0A061GZI3\|A0A061GZI3_THECC	1.8e-14	67.11	Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_041081 PE=4 SV=1	[more]
tr\|A0A1R3HB71\|A0A1R3HB71_COCAP	3.1e-14	69.74	Uncharacterized protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_20433 PE=4 ...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR019634	Uncharacterised_Ycf49

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg03276-RA	Carg03276-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 276..296
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 189..207
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 67..99
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 310..353
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 56..353
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 230..280
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 115..177
None	No IPR available	PANTHER	PTHR33833:SF1	SUBFAMILY NOT NAMED	coord: 1..217
IPR019634	Uncharacterised protein family Ycf49	PANTHER	PTHR33833	FAMILY NOT NAMED	coord: 1..217

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg03276	Cla013259	Watermelon (97103) v1	carwmB0330
Carg03276	Csa6G301030	Cucumber (Chinese Long) v2	carcuB0368
Carg03276	MELO3C025717	Melon (DHL92) v3.5.1	carmeB0340
Carg03276	ClCG02G020690	Watermelon (Charleston Gray)	carwcgB0327
Carg03276	CSPI06G16510	Wild cucumber (PI 183967)	carcpiB0371
Carg03276	Cucsa.379630	Cucumber (Gy14) v1	carcgyB0402
Carg03276	CmaCh20G004500	Cucurbita maxima (Rimu)	carcmaB0473
Carg03276	CmoCh20G004850	Cucurbita moschata (Rifu)	carcmoB0464
Carg03276	Lsi10G013220	Bottle gourd (USVL1VR-Ls)	carlsiB303
Carg03276	Cp4.1LG05g08830	Cucurbita pepo (Zucchini)	carcpeB0475
Carg03276	MELO3C035163.2	Melon (DHL92) v3.6.1	carmedB0346
Carg03276	CsaV3_6G021930	Cucumber (Chinese Long) v3	carcucB0371
Carg03276	Cla97C02G046710	Watermelon (97103) v2	carwmbB0346
Carg03276	Bhi10G000506	Wax gourd	carwgoB0419

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg03276	Carg20255	Silver-seed gourd	carcarB330

The following block(s) are covering this gene:


Gene	Organism	Block
Carg03276	Silver-seed gourd	carcarB353
Carg03276	Cucumber (Gy14) v2	carcgybB0341
Carg03276	Cucumber (Gy14) v2	carcgybB0345
Carg03276	Cucumber (Gy14) v2	carcgybB0348
Carg03276	Cucumber (Gy14) v1	carcgyB0389
Carg03276	Cucurbita maxima (Rimu)	carcmaB0477
Carg03276	Cucurbita maxima (Rimu)	carcmaB0469
Carg03276	Cucurbita maxima (Rimu)	carcmaB0470
Carg03276	Cucurbita maxima (Rimu)	carcmaB0482
Carg03276	Cucurbita moschata (Rifu)	carcmoB0461
Carg03276	Cucurbita moschata (Rifu)	carcmoB0467
Carg03276	Cucurbita moschata (Rifu)	carcmoB0469
Carg03276	Cucurbita pepo (Zucchini)	carcpeB0465
Carg03276	Cucurbita pepo (Zucchini)	carcpeB0469
Carg03276	Cucurbita pepo (Zucchini)	carcpeB0472
Carg03276	Bottle gourd (USVL1VR-Ls)	carlsiB308
Carg03276	Bottle gourd (USVL1VR-Ls)	carlsiB309
Carg03276	Watermelon (Charleston Gray)	carwcgB0332
Carg03276	Watermelon (97103) v1	carwmB0325
Carg03276	Watermelon (97103) v2	carwmbB0351
Carg03276	Watermelon (97103) v2	carwmbB0352