Carg03055 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg03055
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	WW domain-containing protein
Location	Cucurbita_argyrosperma_scaffold_008 : 1592936 .. 1593638 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TCTCTGCAAATCCAAATGAAGAGAAAATGGGAAGACCCACAAGGAGAAACCTTCAATTCTCCCACTGATATTGAGCTCCAGCTCGAGACTCCATTACCTTTGGAGTGGCAACGATGTCTGGATATTCAGGTACTAAACTACTTTGTTCTGTTTTCTTCACTTTCTATATCAAGAACTATATATTTATACAACTTTCTCTTTCGATGGTCATCTTTTTGTTTCACAGTCAGGACAGATATATTTCTATAATACCAAGACACAAAAGAGAACCTCAATGGATCCAAGAAGGAAATGGGAGGGTCCCAACAGTCTTGGAGGTGAGCCCTTGAGCTTGGACCTTGAGCTCAATCTGAATTGCCAATCTATCAGAAACGGTGGTCAGACAAAGAAGAAGAGCGATGGGATTATGGGTGGTGGGTTGGGGAAGGGTTTGAAACAAGGAAATGGGTGTCCTCCATGGCTAAGATTTGAAAGAGGGCAGCAGCAAGAGATGGAGGCCAGAGTTTGCATGCAGTGTCACTTATTGGTCATGCTTTTGAAGTCCTCACCCACATGCCCCAATTGCAAATTCATACACCCAATAACAGACCTGCAAAGCCCTCCAACTACAACCTTCTTTATACCAAATTCTCTACCTACTAAGAGTAATCAAACCCACTCCTTAAAGAGTTTCTTCCCAAACCCTATTCAAAATCAAGTCTAA

mRNA sequence

TCTCTGCAAATCCAAATGAAGAGAAAATGGGAAGACCCACAAGGAGAAACCTTCAATTCTCCCACTGATATTGAGCTCCAGCTCGAGACTCCATTACCTTTGGAGTGGCAACGATGTCTGGATATTCAGTCAGGACAGATATATTTCTATAATACCAAGACACAAAAGAGAACCTCAATGGATCCAAGAAGGAAATGGGAGGGTCCCAACAGTCTTGGAGGTGAGCCCTTGAGCTTGGACCTTGAGCTCAATCTGAATTGCCAATCTATCAGAAACGGTGGTCAGACAAAGAAGAAGAGCGATGGGATTATGGGTGGTGGGTTGGGGAAGGGTTTGAAACAAGGAAATGGGTGTCCTCCATGGCTAAGATTTGAAAGAGGGCAGCAGCAAGAGATGGAGGCCAGAGTTTGCATGCAGTGTCACTTATTGGTCATGCTTTTGAAGTCCTCACCCACATGCCCCAATTGCAAATTCATACACCCAATAACAGACCTGCAAAGCCCTCCAACTACAACCTTCTTTATACCAAATTCTCTACCTACTAAGAGTAATCAAACCCACTCCTTAAAGAGTTTCTTCCCAAACCCTATTCAAAATCAAGTCTAA

Coding sequence (CDS)

ATGAAGAGAAAATGGGAAGACCCACAAGGAGAAACCTTCAATTCTCCCACTGATATTGAGCTCCAGCTCGAGACTCCATTACCTTTGGAGTGGCAACGATGTCTGGATATTCAGTCAGGACAGATATATTTCTATAATACCAAGACACAAAAGAGAACCTCAATGGATCCAAGAAGGAAATGGGAGGGTCCCAACAGTCTTGGAGGTGAGCCCTTGAGCTTGGACCTTGAGCTCAATCTGAATTGCCAATCTATCAGAAACGGTGGTCAGACAAAGAAGAAGAGCGATGGGATTATGGGTGGTGGGTTGGGGAAGGGTTTGAAACAAGGAAATGGGTGTCCTCCATGGCTAAGATTTGAAAGAGGGCAGCAGCAAGAGATGGAGGCCAGAGTTTGCATGCAGTGTCACTTATTGGTCATGCTTTTGAAGTCCTCACCCACATGCCCCAATTGCAAATTCATACACCCAATAACAGACCTGCAAAGCCCTCCAACTACAACCTTCTTTATACCAAATTCTCTACCTACTAAGAGTAATCAAACCCACTCCTTAAAGAGTTTCTTCCCAAACCCTATTCAAAATCAAGTCTAA

Protein sequence

MKRKWEDPQGETFNSPTDIELQLETPLPLEWQRCLDIQSGQIYFYNTKTQKRTSMDPRRKWEGPNSLGGEPLSLDLELNLNCQSIRNGGQTKKKSDGIMGGGLGKGLKQGNGCPPWLRFERGQQQEMEARVCMQCHLLVMLLKSSPTCPNCKFIHPITDLQSPPTTTFFIPNSLPTKSNQTHSLKSFFPNPIQNQV

Homology

[Close]

BLAST of Carg03055 vs. NCBI nr
Match: XP_023536113.1 (uncharacterized protein LOC111797357 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 410.2 bits (1053), Expect = 3.9e-111
Identity = 195/196 (99.49%), Postives = 195/196 (99.49%), Query Frame = 0


Query: 1   MKRKWEDPQGETFNSPTDIELQLETPLPLEWQRCLDIQSGQIYFYNTKTQKRTSMDPRRK 60
           MKRKWED QGETFNSPTDIELQLETPLPLEWQRCLDIQSGQIYFYNTKTQKRTSMDPRRK
Sbjct: 1   MKRKWEDTQGETFNSPTDIELQLETPLPLEWQRCLDIQSGQIYFYNTKTQKRTSMDPRRK 60

Query: 61  WEGPNSLGGEPLSLDLELNLNCQSIRNGGQTKKKSDGIMGGGLGKGLKQGNGCPPWLRFE 120
           WEGPNSLGGEPLSLDLELNLNCQSIRNGGQTKKKSDGIMGGGLGKGLKQGNGCPPWLRFE
Sbjct: 61  WEGPNSLGGEPLSLDLELNLNCQSIRNGGQTKKKSDGIMGGGLGKGLKQGNGCPPWLRFE 120

Query: 121 RGQQQEMEARVCMQCHLLVMLLKSSPTCPNCKFIHPITDLQSPPTTTFFIPNSLPTKSNQ 180
           RGQQQEMEARVCMQCHLLVMLLKSSPTCPNCKFIHPITDLQSPPTTTFFIPNSLPTKSNQ
Sbjct: 121 RGQQQEMEARVCMQCHLLVMLLKSSPTCPNCKFIHPITDLQSPPTTTFFIPNSLPTKSNQ 180

Query: 181 THSLKSFFPNPIQNQV 197
           THSLKSFFPNPIQNQV
Sbjct: 181 THSLKSFFPNPIQNQV 196

[Close]

BLAST of Carg03055 vs. NCBI nr
Match: XP_022936569.1 (uncharacterized protein LOC111443136 [Cucurbita moschata])

HSP 1 Score: 408.7 bits (1049), Expect = 1.1e-110
Identity = 194/196 (98.98%), Postives = 195/196 (99.49%), Query Frame = 0


Query: 1   MKRKWEDPQGETFNSPTDIELQLETPLPLEWQRCLDIQSGQIYFYNTKTQKRTSMDPRRK 60
           MKRKWEDPQGETFNSPTDIELQLETPLPLEWQRCLDIQSGQIYFYNTKTQKRTSMDPRRK
Sbjct: 1   MKRKWEDPQGETFNSPTDIELQLETPLPLEWQRCLDIQSGQIYFYNTKTQKRTSMDPRRK 60

Query: 61  WEGPNSLGGEPLSLDLELNLNCQSIRNGGQTKKKSDGIMGGGLGKGLKQGNGCPPWLRFE 120
           WEGPNSLGGEPLSLDLELNLNCQSIR+GGQTKKKSDGIMGGGLGKGLKQGNGCPPWLRFE
Sbjct: 61  WEGPNSLGGEPLSLDLELNLNCQSIRHGGQTKKKSDGIMGGGLGKGLKQGNGCPPWLRFE 120

Query: 121 RGQQQEMEARVCMQCHLLVMLLKSSPTCPNCKFIHPITDLQSPPTTTFFIPNSLPTKSNQ 180
            GQQQEMEARVCMQCHLLVMLLKSSPTCPNCKFIHPITDLQSPPTTTFFIPNSLPTKSNQ
Sbjct: 121 GGQQQEMEARVCMQCHLLVMLLKSSPTCPNCKFIHPITDLQSPPTTTFFIPNSLPTKSNQ 180

Query: 181 THSLKSFFPNPIQNQV 197
           THSLKSFFPNPIQNQV
Sbjct: 181 THSLKSFFPNPIQNQV 196

[Close]

BLAST of Carg03055 vs. NCBI nr
Match: XP_022976044.1 (uncharacterized protein LOC111476564 [Cucurbita maxima])

HSP 1 Score: 405.2 bits (1040), Expect = 1.3e-109
Identity = 193/196 (98.47%), Postives = 193/196 (98.47%), Query Frame = 0


Query: 1   MKRKWEDPQGETFNSPTDIELQLETPLPLEWQRCLDIQSGQIYFYNTKTQKRTSMDPRRK 60
           MKRKWEDPQGETFNSPTDIELQLETPLPLEWQRCLDIQSGQIYFYNTKTQKRTSMDPRRK
Sbjct: 1   MKRKWEDPQGETFNSPTDIELQLETPLPLEWQRCLDIQSGQIYFYNTKTQKRTSMDPRRK 60

Query: 61  WEGPNSLGGEPLSLDLELNLNCQSIRNGGQTKKKSDGIMGGGLGKGLKQGNGCPPWLRFE 120
           WEG NSLGGEPLSLDLELNLNCQSIRNGGQTKKKSDGIMGGGLGKGLKQGNGCPPWLRFE
Sbjct: 61  WEGSNSLGGEPLSLDLELNLNCQSIRNGGQTKKKSDGIMGGGLGKGLKQGNGCPPWLRFE 120

Query: 121 RGQQQEMEARVCMQCHLLVMLLKSSPTCPNCKFIHPITDLQSPPTTTFFIPNSLPTKSNQ 180
           RGQQQEMEARVCMQCHLLVMLLKSSPTCPNCKF HPITDLQSPPTTTFFIPNSLPTKSNQ
Sbjct: 121 RGQQQEMEARVCMQCHLLVMLLKSSPTCPNCKFTHPITDLQSPPTTTFFIPNSLPTKSNQ 180

Query: 181 THSLKSFFPNPIQNQV 197
           THSLKSFFPN IQNQV
Sbjct: 181 THSLKSFFPNAIQNQV 196

[Close]

BLAST of Carg03055 vs. NCBI nr
Match: XP_022981059.1 (uncharacterized protein LOC111480319 [Cucurbita maxima])

HSP 1 Score: 263.5 bits (672), Expect = 5.9e-67
Identity = 141/196 (71.94%), Postives = 159/196 (81.12%), Query Frame = 0


Query: 1   MKRKWEDPQGETFNSPTDIELQLETPLPLEWQRCLDIQSGQIYFYNTKTQKRTSMDPRRK 60
           MKRKWE+P+G +FNSP DIEL LE+PLPLEWQRCLDIQSG+I+FYNTKT+K+T MDPR K
Sbjct: 1   MKRKWEEPRGGSFNSPADIELHLESPLPLEWQRCLDIQSGKIHFYNTKTRKKTCMDPRSK 60

Query: 61  WEGPNSLGGEPLSLDLELNLNCQSIRNGGQTKKKSDGIMGGGLGKGLKQGNGCPPWLRFE 120
            E P   GG+PLSLDLELNLN QS+RNGG++KKKSDG M   LG+  KQG+GCP      
Sbjct: 61  LE-PRP-GGDPLSLDLELNLNSQSMRNGGESKKKSDGAM-ASLGRAWKQGHGCP------ 120

Query: 121 RGQQQEMEARVCMQCHLLVMLLKSSPTCPNCKFIHPITDLQSPPTTTFFIPNSLPTKSNQ 180
              QQEM ARVCMQCHLLVM+LKSSPTCPNCKFIHPI DLQ+PPTTT FI  S  T +NQ
Sbjct: 121 ---QQEMIARVCMQCHLLVMVLKSSPTCPNCKFIHPI-DLQTPPTTTLFIA-SRSTNNNQ 180

Query: 181 THSLKSFFPNPIQNQV 197
           T SLK  FPNPIQN+V
Sbjct: 181 TQSLKG-FPNPIQNKV 181

[Close]

BLAST of Carg03055 vs. NCBI nr
Match: XP_022940283.1 (uncharacterized protein LOC111445951 [Cucurbita moschata])

HSP 1 Score: 260.8 bits (665), Expect = 3.8e-66
Identity = 141/196 (71.94%), Postives = 155/196 (79.08%), Query Frame = 0


Query: 1   MKRKWEDPQGETFNSPTDIELQLETPLPLEWQRCLDIQSGQIYFYNTKTQKRTSMDPRRK 60
           MKRKWE+P G +FNSP DIEL LE+PLPLEWQRCLDIQSG+I+FYNTKTQKRTSMDPR K
Sbjct: 5   MKRKWEEPPGGSFNSPADIELHLESPLPLEWQRCLDIQSGKIHFYNTKTQKRTSMDPRSK 64

Query: 61  WEGPNSLGGEPLSLDLELNLNCQSIRNGGQTKKKSDGIMGGGLGKGLKQGNGCPPWLRFE 120
            E   S GG+PLSLDLELNLN QS+RNGG++KKKSDG          KQG+GCP      
Sbjct: 65  LE--PSPGGDPLSLDLELNLNSQSMRNGGESKKKSDG--------AWKQGHGCP------ 124

Query: 121 RGQQQEMEARVCMQCHLLVMLLKSSPTCPNCKFIHPITDLQSPPTTTFFIPNSLPTKSNQ 180
              QQEM ARVCMQCHLLVM+LKSSPTCPNCKFIHPI DLQ+PPTTT FI  S  T +NQ
Sbjct: 125 ---QQEMIARVCMQCHLLVMVLKSSPTCPNCKFIHPI-DLQTPPTTTLFIA-SRSTNNNQ 178

Query: 181 THSLKSFFPNPIQNQV 197
           T SLK  FPNPIQN+V
Sbjct: 185 TQSLKG-FPNPIQNKV 178

[Close]

BLAST of Carg03055 vs. TAIR10
Match: AT1G78170.1 (unknown protein)

HSP 1 Score: 89.4 bits (220), Expect = 2.8e-18
Identity = 70/199 (35.18%), Postives = 87/199 (43.72%), Query Frame = 0


Query: 6   EDPQGETFNSPT-DIELQLETPLPLEWQRCLDIQSGQIYFYNTKTQKRTSMDPRRKWEGP 65
           E P+ E+  S T D EL L TPLP +WQ              TK   RTS + R   + P
Sbjct: 43  ERPKSESMRSITFDFELHLHTPLPSDWQ--------------TKGYSRTSDEHRAYPKDP 102

Query: 66  NSLGGEPLSLDLELNLNCQSIRNGGQTKK----------------------KSDGIMGGG 125
              G   +SLDLELNL+     +   TKK                          I+G G
Sbjct: 103 VIFGQPKMSLDLELNLSPSGSPSRTTTKKYESSSIHNETVSSSKIKVLTNTSKKSIIGTG 162

Query: 126 LGKGLKQGNGCPPWLRFERGQQ-------QEMEARVCMQCHLLVMLLKSSPTCPNCKFIH 175
           L +        P WL FE G         QEM   VCM+CH+LVML  S+P CPNCKF+H
Sbjct: 163 LSRS-------PSWLAFEGGDDNDVDHKGQEMVTTVCMKCHMLVMLCTSTPVCPNCKFMH 216

[Close]

BLAST of Carg03055 vs. TAIR10
Match: AT4G08910.1 (unknown protein)

HSP 1 Score: 58.5 bits (140), Expect = 5.2e-09
Identity = 24/36 (66.67%), Postives = 30/36 (83.33%), Query Frame = 0


Query: 124 QQEMEARVCMQCHLLVMLLKSSPTCPNCKFIHPITD 160
           ++EM ARVCM+CH+LVML K+SP CPNCKF+H   D
Sbjct: 162 EEEMVARVCMKCHMLVMLCKASPACPNCKFMHSPED 197

[Close]

BLAST of Carg03055 vs. TAIR10
Match: AT1G22250.1 (unknown protein)

HSP 1 Score: 53.5 bits (127), Expect = 1.7e-07
Identity = 25/47 (53.19%), Postives = 29/47 (61.70%), Query Frame = 0


Query: 114 PPWLRFE-----RGQQQEMEARVCMQCHLLVMLLKSSPTCPNCKFIH 156
           P WL FE          EM   VCM+CH+LVML KS+  CPNCKF+H
Sbjct: 134 PSWLAFEGDDXXXXXXXEMITTVCMKCHMLVMLCKSTLVCPNCKFMH 180

[Close]

BLAST of Carg03055 vs. TrEMBL
Match: tr|A0A1S3CQA1|A0A1S3CQA1_CUCME (uncharacterized protein LOC103503587 OS=Cucumis melo OX=3656 GN=LOC103503587 PE=4 SV=1)

HSP 1 Score: 218.0 bits (554), Expect = 1.9e-53
Identity = 134/222 (60.36%), Postives = 142/222 (63.96%), Query Frame = 0


Query: 1   MKRKWEDPQGETFNSPTD-IELQLETPLPLEWQRCLDIQSGQIYFYNTKTQKRTSMDPRR 60
           MKRKWEDPQGE FNSPTD IEL LETPLPLEWQRCLDIQSG+I+F+NTKTQKRTSMDPRR
Sbjct: 1   MKRKWEDPQGENFNSPTDNIELHLETPLPLEWQRCLDIQSGEIHFFNTKTQKRTSMDPRR 60

Query: 61  -KWEGPNSLGG-------EPLSLDLELNLNCQSIRNGGQTKKKSDGIMGGGLGK--GLKQ 120
            K EGP +          + LSLDLELNLNCQS  N       +D    GGL K      
Sbjct: 61  NKLEGPTTTPSRSHVSDHQALSLDLELNLNCQS--NKKILSNNNDDT--GGLMKLQANNY 120

Query: 121 GNGCPPWLRFERGQQQEMEARVCMQCHLLVMLLKSSPTCPNCKFIHPITD---------- 180
           G  C PWLRFER +QQEM ARVCMQCHLLVMLLKSSPTCPNCKFIHPITD          
Sbjct: 121 GISC-PWLRFER-EQQEMVARVCMQCHLLVMLLKSSPTCPNCKFIHPITDHXXXXXXXXX 180

Query: 181 -----LQSPPTTTFFIPNSLPTKSNQTHSLKSFFPNPIQNQV 197
                                       SLKSFFPNPIQN+V
Sbjct: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXESLKSFFPNPIQNKV 216

[Close]

BLAST of Carg03055 vs. TrEMBL
Match: tr|A0A0A0LHX2|A0A0A0LHX2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G895830 PE=4 SV=1)

HSP 1 Score: 209.9 bits (533), Expect = 5.1e-51
Identity = 128/226 (56.64%), Postives = 137/226 (60.62%), Query Frame = 0


Query: 1   MKRKWEDPQGETFNSPTD-IELQLETPLPLEWQRCLDIQSGQIYFYNTKTQKRTSMDPRR 60
           MKRKWEDPQG+ FNSPTD IEL LETPLPLEWQRCLDIQSG+I+F+NTKTQKRTSMDPRR
Sbjct: 1   MKRKWEDPQGDNFNSPTDNIELHLETPLPLEWQRCLDIQSGEIHFFNTKTQKRTSMDPRR 60

Query: 61  -KWEGPNSLGG--------EPLSLDLELNLNCQSIRNGGQTKKKSDGIMGGGLGKGLKQG 120
            K EGP +           + LSLDLELNLNCQS                  L +    G
Sbjct: 61  NKLEGPTTTPNRSFHASDHQALSLDLELNLNCQSXXXXXXXXXXXXXXXLLKL-QANNYG 120

Query: 121 NGCPPWLRFERGQQQEMEARVCMQCHLLVMLLKSSPTCPNCKFIHPITD----------- 180
             C PWLRFER +QQEM ARVCMQCHLLVMLLKSSPTCPNCKFIHPITD           
Sbjct: 121 ISC-PWLRFER-EQQEMVARVCMQCHLLVMLLKSSPTCPNCKFIHPITDHXXXXXXXXXX 180

Query: 181 ---------LQSPPTTTFFIPNSLPTKSNQTHSLKSFFPNPIQNQV 197
                                           SLKSFFPNPIQN+V
Sbjct: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESLKSFFPNPIQNKV 223

[Close]

BLAST of Carg03055 vs. TrEMBL
Match: tr|A0A2N9F9G2|A0A2N9F9G2_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS11627 PE=4 SV=1)

HSP 1 Score: 166.4 bits (420), Expect = 6.5e-38
Identity = 97/188 (51.60%), Postives = 111/188 (59.04%), Query Frame = 0


Query: 2   KRKWEDPQGETF----------NSPTDIELQLETPLPLEWQRCLDIQSGQIYFYNTKTQK 61
           KRK E+PQ E F           S  DIELQLETPLPLEWQRCLD+QSGQI+FYNT+T K
Sbjct: 25  KRKLEEPQTEQFFEKRSKGEGTKSILDIELQLETPLPLEWQRCLDVQSGQIHFYNTRTHK 84

Query: 62  RTSMDPRRKWEGPNSLGGEPLSLDLELNLNCQSIR------------NGGQTKKKSDGIM 121
           RTS DPR     P  +  + +SLDL LNL C+S+R            +G   +   D  M
Sbjct: 85  RTSKDPR---SSPEPVSPDHMSLDLRLNLPCESLRKNHVDDNFIKHSSGSPARGSGDPFM 144

Query: 122 GGGLGKGLKQG--NGCPPWLRFERGQQQEMEARVCMQCHLLVMLLKSSPTCPNCKFIHPI 166
                K    G  +  P WL FE   QQEM A VC QCH+LVML KSSP CPNCKF+HP 
Sbjct: 145 ESSRQKKNLGGLTSSTPSWLAFEGDHQQEMVATVCTQCHMLVMLCKSSPACPNCKFMHPP 204

[Close]

BLAST of Carg03055 vs. TrEMBL
Match: tr|V4T724|V4T724_9ROSI (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10002416mg PE=4 SV=1)

HSP 1 Score: 163.3 bits (412), Expect = 5.5e-37
Identity = 95/165 (57.58%), Postives = 109/165 (66.06%), Query Frame = 0


Query: 12  TFNSPTDIELQLETPLPLEWQRCLDIQSGQIYFYNTKTQKRTSMDPRRKWEGPNSLGGEP 71
           T +S  DIELQLETPLPLEW+RCLDIQSG+I+FYNT+T K+TS DPR   E PN   G+ 
Sbjct: 48  TKSSIFDIELQLETPLPLEWERCLDIQSGEIHFYNTRTHKKTSGDPRGSPEPPNR-AGDH 107

Query: 72  LSLDLELNLNCQSIR-----NGGQTKKKSDGIMGGGLGKGLKQGNG-----CPPWLRFE- 131
           +SLDLELNL C S R     N   +K  S       LG  LK+ +G     CP WL FE 
Sbjct: 108 MSLDLELNLPCDSQRKNQGSNNIISKPNSASPPRHHLGDHLKKKSGDHLSRCPSWLAFEG 167

Query: 132 -RGQQQEMEARVCMQCHLLVMLLKSSPTCPNCKFIHPITDLQSPP 165
               QQEM A  CM+CH+LVML KSSPTCPNCKF+HP    QSPP
Sbjct: 168 DHDDQQEMVATACMRCHMLVMLCKSSPTCPNCKFLHPPD--QSPP 209

[Close]

BLAST of Carg03055 vs. TrEMBL
Match: tr|A0A2H5NN70|A0A2H5NN70_CITUN (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_060870 PE=4 SV=1)

HSP 1 Score: 163.3 bits (412), Expect = 5.5e-37
Identity = 95/165 (57.58%), Postives = 109/165 (66.06%), Query Frame = 0


Query: 12  TFNSPTDIELQLETPLPLEWQRCLDIQSGQIYFYNTKTQKRTSMDPRRKWEGPNSLGGEP 71
           T +S  DIELQLETPLPLEW+RCLDIQSG+I+FYNT+T K+TS DPR   E PN   G+ 
Sbjct: 48  TKSSIFDIELQLETPLPLEWERCLDIQSGEIHFYNTRTHKKTSGDPRGSPEPPNR-AGDH 107

Query: 72  LSLDLELNLNCQSIR-----NGGQTKKKSDGIMGGGLGKGLKQGNG-----CPPWLRFE- 131
           +SLDLELNL C S R     N   +K  S       LG  LK+ +G     CP WL FE 
Sbjct: 108 MSLDLELNLPCDSQRKNQGSNNIISKPNSASPPRHHLGDHLKKKSGDHLSRCPSWLAFEG 167

Query: 132 -RGQQQEMEARVCMQCHLLVMLLKSSPTCPNCKFIHPITDLQSPP 165
               QQEM A  CM+CH+LVML KSSPTCPNCKF+HP    QSPP
Sbjct: 168 DHDDQQEMVATACMRCHMLVMLCKSSPTCPNCKFLHPPD--QSPP 209

The following BLAST results are available for this feature:

BLAST of Carg03055 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023536113.1	3.9e-111	99.49	uncharacterized protein LOC111797357 [Cucurbita pepo subsp. pepo]	[more]
XP_022936569.1	1.1e-110	98.98	uncharacterized protein LOC111443136 [Cucurbita moschata]	[more]
XP_022976044.1	1.3e-109	98.47	uncharacterized protein LOC111476564 [Cucurbita maxima]	[more]
XP_022981059.1	5.9e-67	71.94	uncharacterized protein LOC111480319 [Cucurbita maxima]	[more]
XP_022940283.1	3.8e-66	71.94	uncharacterized protein LOC111445951 [Cucurbita moschata]	[more]

BLAST of Carg03055 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G78170.1	2.8e-18	35.18	unknown protein	[more]
AT4G08910.1	5.2e-09	66.67	unknown protein	[more]
AT1G22250.1	1.7e-07	53.19	unknown protein	[more]

BLAST of Carg03055 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Carg03055 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3CQA1\|A0A1S3CQA1_CUCME	1.9e-53	60.36	uncharacterized protein LOC103503587 OS=Cucumis melo OX=3656 GN=LOC103503587 PE=...	[more]
tr\|A0A0A0LHX2\|A0A0A0LHX2_CUCSA	5.1e-51	56.64	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G895830 PE=4 SV=1	[more]
tr\|A0A2N9F9G2\|A0A2N9F9G2_FAGSY	6.5e-38	51.60	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS11627 PE=4 SV=1	[more]
tr\|V4T724\|V4T724_9ROSI	5.5e-37	57.58	Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10002416mg PE=4 ...	[more]
tr\|A0A2H5NN70\|A0A2H5NN70_CITUN	5.5e-37	57.58	Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_060870 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

Vocabulary: **INTERPRO**
Term	Definition
IPR036020	WW_dom_sf
IPR001202	WW_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005515	protein binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg03055-RA	Carg03055-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	G3DSA:2.20.70.10		coord: 22..64 e-value: 9.8E-8 score: 33.4
None	No IPR available	PANTHER	PTHR14791	BOMB/KIRA PROTEINS	coord: 2..163
None	No IPR available	PANTHER	PTHR14791:SF36	F16L1.2 PROTEIN	coord: 2..163
IPR001202	WW domain	PROSITE	PS50020	WW_DOMAIN_2	coord: 25..59 score: 9.477
IPR036020	WW domain superfamily	SUPERFAMILY	SSF51045	WW domain	coord: 25..59

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg03055	Csa3G895830	Cucumber (Chinese Long) v2	carcuB0655
Carg03055	MELO3C003450	Melon (DHL92) v3.5.1	carmeB0631
Carg03055	ClCG11G015290	Watermelon (Charleston Gray)	carwcgB0610
Carg03055	CSPI03G46260	Wild cucumber (PI 183967)	carcpiB0665
Carg03055	Cucsa.312690	Cucumber (Gy14) v1	carcgyB0712
Carg03055	CmaCh01G014270	Cucurbita maxima (Rimu)	carcmaB0897
Carg03055	CmaCh09G006450	Cucurbita maxima (Rimu)	carcmaB0889
Carg03055	CmoCh01G014750	Cucurbita moschata (Rifu)	carcmoB0873
Carg03055	CmoCh09G006280	Cucurbita moschata (Rifu)	carcmoB0865
Carg03055	Lsi04G023440	Bottle gourd (USVL1VR-Ls)	carlsiB575
Carg03055	Cp4.1LG06g05100	Cucurbita pepo (Zucchini)	carcpeB0906
Carg03055	CsGy3G043730	Cucumber (Gy14) v2	carcgybB0632
Carg03055	MELO3C003450.2	Melon (DHL92) v3.6.1	carmedB0640
Carg03055	CsaV3_3G048710	Cucumber (Chinese Long) v3	carcucB0666
Carg03055	Cla97C11G221320	Watermelon (97103) v2	carwmbB0656
Carg03055	Bhi09G002191	Wax gourd	carwgoB0752

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg03055	Carg00371	Silver-seed gourd	carcarB554

The following block(s) are covering this gene:


Gene	Organism	Block
Carg03055	Cucurbita pepo (Zucchini)	carcpeB0899
Carg03055	Watermelon (97103) v1	carwmB0634