Carg02498 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg02498
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Homeobox protein knotted-1, putative
Location	Cucurbita_argyrosperma_scaffold_009 : 263056 .. 264272 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTAAGCAAGTCAAACAAGTTATTATCATCATTCAAAATGTTTAGATATTAGTGTCTTTTTTTAAATGGAGATTCAAATTCTCTCTTTCTTGTCTGTAATCTACTATACAAGAAACTTAAAAATGCTTTGTTTAATTTAATCTCTGCTGGGTTTTTCTTTTACTGTAAAGTCTTTCATTATCCATCTTTTGCTCGTTGTAGTAGCGTGCATATTAATATCTAAAATTGTCATCTTATTCAAGAAATTGGGGTGGTTTTGAATTGTCACGCCCTCGATTTAACATGACCAATAATGTGTGGCTTTTAATGTCAATTCCAGTCTTGTGGGGGAAGAGGTTGTTAAAAATATAATGAGATCCTTTAAGCACAGTTAGTTGTAGTATGGAACCTTAATTATTGGCACCGTCAAAGTAGTTTATATCTTTTGCTTTTGTTGAACATTTGATGCATTTCCCATTACCAAACATGGAAAGATGTGCTAATTTACCAACTTTGTATGCTAATTTAACATGGTGTTTAGGAGTGAGCCTTGGTGAAGGAAGCGGTGCAACGATGTCAGACGACGACGACGACGTTCCCATGGAGTTTTCGCTTGATCAATCTGGTAGTGATGCACACGACATGATGGGGTTCGGACCACTGCTTCCAACCGAATCAGAAAGGTCGTTGATGGAGAGGGTTCGACAAGAATTGAAGATTGAGCTAAAACAGGTCCCTTTTATATGGTCTTGCAAATGAAGGGATGGTTTGTTTGGGATTTAGAAGAGGTCAAGAACGTGATGGTATTTTGGTTGCAGGGATTCAAGTCAAGAATTGAGGACGTGAGAGAGGAGATACTGAGAAAAAGAAGGGCAGGGAAGTTGCCTGGTGATACAACCACAGTATTGAAGAACTGGTGGCAGCAGCATTCCAAGTGGCCATACCCAACGGTAAGGAAAAACCAAACCCAACCATTTCATTTGGAAACAAAGAGTTTTGAAGTTGGAATCTCTACAACATCTCGTCTTTCCTTTGCGATTGCAGGAAGACGACAAGGCGAAGCTGGTGGAGGAGACGGGGTTGCAGCTGAAACAAATAAACAATTGGTTCATCAACCAAAGGAAGAGAAACTGGCACAGCAACTCTCAATCAGTAACATCCCTGAAGTCAAAGCGCAAGAGATAAGGAAATCATATGATATGTTATATTGTAGGTTTGGCAAAAGTATGGTCTGA

mRNA sequence

ATGGGAGTGAGCCTTGGTGAAGGAAGCGGTGCAACGATGTCAGACGACGACGACGACGTTCCCATGGAGTTTTCGCTTGATCAATCTGGTAGTGATGCACACGACATGATGGGGTTCGGACCACTGCTTCCAACCGAATCAGAAAGGTCGTTGATGGAGAGGGGATGGTTTGTTTGGGATTTAGAAGAGGTCAAGAACGTGATGGTATTTTGGTTGCAGGGATTCAAGTCAAGAATTGAGGACGTGAGAGAGGAGATACTGAGAAAAAGAAGGGCAGGGAAGTTGCCTGGTGATACAACCACAGTATTGAAGAACTGGTGGCAGCAGCATTCCAAGTGGCCATACCCAACGGTAAGGAAAAACCAAACCCAACCATTTCATTTGGAAACAAAGAGTTTTGAAGTTGGAATCTCTACAACATCTCGTCTTTCCTTTGCGATTGCAGGAAGACGACAAGGCGAAGCTGGTGGAGGAGACGGGGTTGCAGCTGAAACAAATAAACAATTGGTTCATCAACCAAAGGAAGAGAAACTGGCACAGCAACTCTCAATCAGTAACATCCCTGAAGTCAAAGCGCAAGAGATAAGGAAATCATATGATATGTTATATTGTAGGTTTGGCAAAAGTATGGTCTGA

Coding sequence (CDS)

ATGGGAGTGAGCCTTGGTGAAGGAAGCGGTGCAACGATGTCAGACGACGACGACGACGTTCCCATGGAGTTTTCGCTTGATCAATCTGGTAGTGATGCACACGACATGATGGGGTTCGGACCACTGCTTCCAACCGAATCAGAAAGGTCGTTGATGGAGAGGGGATGGTTTGTTTGGGATTTAGAAGAGGTCAAGAACGTGATGGTATTTTGGTTGCAGGGATTCAAGTCAAGAATTGAGGACGTGAGAGAGGAGATACTGAGAAAAAGAAGGGCAGGGAAGTTGCCTGGTGATACAACCACAGTATTGAAGAACTGGTGGCAGCAGCATTCCAAGTGGCCATACCCAACGGTAAGGAAAAACCAAACCCAACCATTTCATTTGGAAACAAAGAGTTTTGAAGTTGGAATCTCTACAACATCTCGTCTTTCCTTTGCGATTGCAGGAAGACGACAAGGCGAAGCTGGTGGAGGAGACGGGGTTGCAGCTGAAACAAATAAACAATTGGTTCATCAACCAAAGGAAGAGAAACTGGCACAGCAACTCTCAATCAGTAACATCCCTGAAGTCAAAGCGCAAGAGATAAGGAAATCATATGATATGTTATATTGTAGGTTTGGCAAAAGTATGGTCTGA

Protein sequence

MGVSLGEGSGATMSDDDDDVPMEFSLDQSGSDAHDMMGFGPLLPTESERSLMERGWFVWDLEEVKNVMVFWLQGFKSRIEDVREEILRKRRAGKLPGDTTTVLKNWWQQHSKWPYPTVRKNQTQPFHLETKSFEVGISTTSRLSFAIAGRRQGEAGGGDGVAAETNKQLVHQPKEEKLAQQLSISNIPEVKAQEIRKSYDMLYCRFGKSMV

Homology

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BLAST of Carg02498 vs. NCBI nr
Match: XP_022958449.1 (homeobox protein knotted-1-like 7 [Cucurbita moschata])

HSP 1 Score: 191.4 bits (485), Expect = 3.1e-45
Identity = 99/116 (85.34%), Postives = 102/116 (87.93%), Query Frame = 0


Query: 2   GVSLGEGSGATMSDDDDDVPMEFSLDQSGSDAHDMMGFGPLLPTESERSLMERGWFVWDL 61
           GVSLGEGSGATMSDDDDDVPMEFSLDQSG DAHDMMGFGPLLPTESERSLMER       
Sbjct: 149 GVSLGEGSGATMSDDDDDVPMEFSLDQSGGDAHDMMGFGPLLPTESERSLMER-----VR 208

Query: 62  EEVKNVMVFWLQGFKSRIEDVREEILRKRRAGKLPGDTTTVLKNWWQQHSKWPYPT 118
           +E+K   +   QGFKSRIEDVREEILRKRRAGKLPGDTTTVLKNWWQQHSKWPYPT
Sbjct: 209 QELK---IELKQGFKSRIEDVREEILRKRRAGKLPGDTTTVLKNWWQQHSKWPYPT 256

[Close]

BLAST of Carg02498 vs. NCBI nr
Match: XP_023532817.1 (homeobox protein knotted-1-like 7 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023532818.1 homeobox protein knotted-1-like 7 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 191.4 bits (485), Expect = 3.1e-45
Identity = 99/116 (85.34%), Postives = 102/116 (87.93%), Query Frame = 0


Query: 2   GVSLGEGSGATMSDDDDDVPMEFSLDQSGSDAHDMMGFGPLLPTESERSLMERGWFVWDL 61
           GVSLGEGSGATMSDDDDDVPMEFSLDQSG DAHDMMGFGPLLPTESERSLMER       
Sbjct: 148 GVSLGEGSGATMSDDDDDVPMEFSLDQSGGDAHDMMGFGPLLPTESERSLMER-----VR 207

Query: 62  EEVKNVMVFWLQGFKSRIEDVREEILRKRRAGKLPGDTTTVLKNWWQQHSKWPYPT 118
           +E+K   +   QGFKSRIEDVREEILRKRRAGKLPGDTTTVLKNWWQQHSKWPYPT
Sbjct: 208 QELK---IELKQGFKSRIEDVREEILRKRRAGKLPGDTTTVLKNWWQQHSKWPYPT 255

[Close]

BLAST of Carg02498 vs. NCBI nr
Match: XP_004143939.1 (PREDICTED: homeobox protein knotted-1-like 7 [Cucumis sativus] >KGN50155.1 hypothetical protein Csa_5G156150 [Cucumis sativus])

HSP 1 Score: 187.6 bits (475), Expect = 4.4e-44
Identity = 95/116 (81.90%), Postives = 103/116 (88.79%), Query Frame = 0


Query: 2   GVSLGEGSGATMSDDDDDVPMEFSLDQSGSDAHDMMGFGPLLPTESERSLMERGWFVWDL 61
           GVSLGEG+GATMSDD+DD+PM+FSLDQSG+DAHDMMGFGPLLPTESERSLMER       
Sbjct: 148 GVSLGEGTGATMSDDEDDIPMDFSLDQSGADAHDMMGFGPLLPTESERSLMER-----VR 207

Query: 62  EEVKNVMVFWLQGFKSRIEDVREEILRKRRAGKLPGDTTTVLKNWWQQHSKWPYPT 118
           +E+K   +   QGFKSRIEDVREEILRKRRAGKLPGDTTTVLKNWWQQHSKWPYPT
Sbjct: 208 QELK---IELKQGFKSRIEDVREEILRKRRAGKLPGDTTTVLKNWWQQHSKWPYPT 255

[Close]

BLAST of Carg02498 vs. NCBI nr
Match: XP_008437194.1 (PREDICTED: homeobox protein knotted-1-like 7 [Cucumis melo])

HSP 1 Score: 187.6 bits (475), Expect = 4.4e-44
Identity = 95/116 (81.90%), Postives = 103/116 (88.79%), Query Frame = 0


Query: 2   GVSLGEGSGATMSDDDDDVPMEFSLDQSGSDAHDMMGFGPLLPTESERSLMERGWFVWDL 61
           GVSLGEG+GATMSDD+DD+PM+FSLDQSG+DAHDMMGFGPLLPTESERSLMER       
Sbjct: 147 GVSLGEGTGATMSDDEDDIPMDFSLDQSGADAHDMMGFGPLLPTESERSLMER-----VR 206

Query: 62  EEVKNVMVFWLQGFKSRIEDVREEILRKRRAGKLPGDTTTVLKNWWQQHSKWPYPT 118
           +E+K   +   QGFKSRIEDVREEILRKRRAGKLPGDTTTVLKNWWQQHSKWPYPT
Sbjct: 207 QELK---IELKQGFKSRIEDVREEILRKRRAGKLPGDTTTVLKNWWQQHSKWPYPT 254

[Close]

BLAST of Carg02498 vs. NCBI nr
Match: XP_022159793.1 (homeobox protein knotted-1-like 7 [Momordica charantia])

HSP 1 Score: 187.6 bits (475), Expect = 4.4e-44
Identity = 95/116 (81.90%), Postives = 103/116 (88.79%), Query Frame = 0


Query: 2   GVSLGEGSGATMSDDDDDVPMEFSLDQSGSDAHDMMGFGPLLPTESERSLMERGWFVWDL 61
           GVSLGEG+GATMSDD+DD+PM+FSLDQSG+DAHDMMGFGPLLPTESERSLMER       
Sbjct: 80  GVSLGEGTGATMSDDEDDIPMDFSLDQSGADAHDMMGFGPLLPTESERSLMER-----VR 139

Query: 62  EEVKNVMVFWLQGFKSRIEDVREEILRKRRAGKLPGDTTTVLKNWWQQHSKWPYPT 118
           +E+K   +   QGFKSRIEDVREEILRKRRAGKLPGDTTTVLKNWWQQHSKWPYPT
Sbjct: 140 QELK---IELKQGFKSRIEDVREEILRKRRAGKLPGDTTTVLKNWWQQHSKWPYPT 187

[Close]

BLAST of Carg02498 vs. TAIR10
Match: AT1G62990.1 (KNOTTED-like homeobox of Arabidopsis thaliana 7)

HSP 1 Score: 166.4 bits (420), Expect = 1.9e-41
Identity = 87/119 (73.11%), Postives = 96/119 (80.67%), Query Frame = 0


Query: 2   GVSLGEGSGATMSDDDDDVPMEFSLDQSGSD---AHDMMGFGPLLPTESERSLMERGWFV 61
           G +LGEGSGATMS+D+DD+PM+FS D SG D    HDM GFGPLLPTESERSLMER    
Sbjct: 135 GATLGEGSGATMSEDEDDLPMDFSSDNSGVDFSGGHDMTGFGPLLPTESERSLMER---- 194

Query: 62  WDLEEVKNVMVFWLQGFKSRIEDVREEILRKRRAGKLPGDTTTVLKNWWQQHSKWPYPT 118
              +E+K  +    QGFKSRIEDVREEI+RKRRAGKLPGDTTTVLKNWWQQH KWPYPT
Sbjct: 195 -VRQELKLEL---KQGFKSRIEDVREEIMRKRRAGKLPGDTTTVLKNWWQQHCKWPYPT 245

[Close]

BLAST of Carg02498 vs. TAIR10
Match: AT5G11060.1 (KNOTTED1-like homeobox gene 4)

HSP 1 Score: 133.3 bits (334), Expect = 1.8e-31
Identity = 74/122 (60.66%), Postives = 89/122 (72.95%), Query Frame = 0


Query: 2   GVSLGEGSGATMSDDDDDVPMEFSLDQSGSDAH------DMMGFGPLLPTESERSLMERG 61
           GVS GEG+GATMS+D+D        +Q  SDAH      D +GFGPL+PTESERSLMER 
Sbjct: 232 GVSPGEGTGATMSEDED--------EQVESDAHLFDGSLDGLGFGPLVPTESERSLMER- 291

Query: 62  WFVWDLEEVKNVMVFWLQGFKSRIEDVREEILRKRRAGKLPGDTTTVLKNWWQQHSKWPY 118
                 +E+K+ +    QG+K +I D+REEILRKRRAGKLPGDTT+VLK+WWQ HSKWPY
Sbjct: 292 ----VRQELKHEL---KQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPY 337

[Close]

BLAST of Carg02498 vs. TAIR10
Match: AT5G25220.1 (KNOTTED1-like homeobox gene 3)

HSP 1 Score: 132.5 bits (332), Expect = 3.1e-31
Identity = 72/117 (61.54%), Postives = 88/117 (75.21%), Query Frame = 0


Query: 2   GVSLGEGSGATMSDDDDD-VPMEFSLDQSGSDAHDMMGFGPLLPTESERSLMERGWFVWD 61
           GVS GEG GATMSDD+D+ V  + ++   G    D++GFGPL+PTESERSLMER      
Sbjct: 268 GVSPGEGMGATMSDDEDEQVESDANMFDGGL---DVLGFGPLIPTESERSLMER-----V 327

Query: 62  LEEVKNVMVFWLQGFKSRIEDVREEILRKRRAGKLPGDTTTVLKNWWQQHSKWPYPT 118
            +E+K+ +    QG+K +I D+REEILRKRRAGKLPGDTT+VLK WWQ HSKWPYPT
Sbjct: 328 RQELKHEL---KQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKAWWQSHSKWPYPT 373

[Close]

BLAST of Carg02498 vs. TAIR10
Match: AT4G32040.1 (KNOTTED1-like homeobox gene 5)

HSP 1 Score: 127.5 bits (319), Expect = 9.8e-30
Identity = 70/119 (58.82%), Postives = 85/119 (71.43%), Query Frame = 0


Query: 2   GVSLGEGSGATMSDDDDD--VPMEFSLDQSGSDAHD-MMGFGPLLPTESERSLMERGWFV 61
           GVS  E +G TMSDD+DD  V  E ++     D  D +MGFGPL+PTE ERSLMER    
Sbjct: 222 GVSPSESNGKTMSDDEDDNQVESEVNMFDGSLDGSDCLMGFGPLVPTERERSLMER---- 281

Query: 62  WDLEEVKNVMVFWLQGFKSRIEDVREEILRKRRAGKLPGDTTTVLKNWWQQHSKWPYPT 118
              +E+K+ +    QGFK +I D+REEI+RKRRAGKLPGDTT+VLK WW+ HSKWPYPT
Sbjct: 282 -VKKELKHEL---KQGFKEKIVDIREEIMRKRRAGKLPGDTTSVLKEWWRTHSKWPYPT 332

[Close]

BLAST of Carg02498 vs. TAIR10
Match: AT1G23380.2 (KNOTTED1-like homeobox gene 6)

HSP 1 Score: 51.2 bits (121), Expect = 9.0e-07
Identity = 21/46 (45.65%), Postives = 29/46 (63.04%), Query Frame = 0


Query: 72  LQGFKSRIEDVREEILRKRRAGKLPGDTTTVLKNWWQQHSKWPYPT 118
           L+ F SRI  ++ E  +K++ GKLP +    L +WW  H KWPYPT
Sbjct: 232 LRKFGSRISTLKLEFSKKKKKGKLPREARQALLDWWNLHYKWPYPT 277

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BLAST of Carg02498 vs. Swiss-Prot
Match: sp|Q9FPQ8|KNAT7_ARATH (Homeobox protein knotted-1-like 7 OS=Arabidopsis thaliana OX=3702 GN=KNAT7 PE=1 SV=1)

HSP 1 Score: 166.4 bits (420), Expect = 3.4e-40
Identity = 87/119 (73.11%), Postives = 96/119 (80.67%), Query Frame = 0


Query: 2   GVSLGEGSGATMSDDDDDVPMEFSLDQSGSD---AHDMMGFGPLLPTESERSLMERGWFV 61
           G +LGEGSGATMS+D+DD+PM+FS D SG D    HDM GFGPLLPTESERSLMER    
Sbjct: 135 GATLGEGSGATMSEDEDDLPMDFSSDNSGVDFSGGHDMTGFGPLLPTESERSLMER---- 194

Query: 62  WDLEEVKNVMVFWLQGFKSRIEDVREEILRKRRAGKLPGDTTTVLKNWWQQHSKWPYPT 118
              +E+K  +    QGFKSRIEDVREEI+RKRRAGKLPGDTTTVLKNWWQQH KWPYPT
Sbjct: 195 -VRQELKLEL---KQGFKSRIEDVREEIMRKRRAGKLPGDTTTVLKNWWQQHCKWPYPT 245

[Close]

BLAST of Carg02498 vs. Swiss-Prot
Match: sp|P46606|HD1_BRANA (Homeobox protein HD1 OS=Brassica napus OX=3708 GN=HD1 PE=2 SV=1)

HSP 1 Score: 163.3 bits (412), Expect = 2.9e-39
Identity = 86/119 (72.27%), Postives = 95/119 (79.83%), Query Frame = 0


Query: 2   GVSLGEGSGATMSDDDDDVPMEFSLDQSGSD---AHDMMGFGPLLPTESERSLMERGWFV 61
           G +LGEGSGATMS+D+DD+ M+FS D SG D    HDM GFGPLLPTESERSLMER    
Sbjct: 138 GATLGEGSGATMSEDEDDLQMDFSSDNSGVDFSGGHDMTGFGPLLPTESERSLMER---- 197

Query: 62  WDLEEVKNVMVFWLQGFKSRIEDVREEILRKRRAGKLPGDTTTVLKNWWQQHSKWPYPT 118
              +E+K  +    QGFKSRIEDVREEI+RKRRAGKLPGDTTTVLKNWWQQH KWPYPT
Sbjct: 198 -VRQELKLEL---KQGFKSRIEDVREEIMRKRRAGKLPGDTTTVLKNWWQQHCKWPYPT 248

[Close]

BLAST of Carg02498 vs. Swiss-Prot
Match: sp|O04136|KNAP3_MALDO (Homeobox protein knotted-1-like 3 OS=Malus domestica OX=3750 PE=2 SV=1)

HSP 1 Score: 142.9 bits (359), Expect = 4.1e-33
Identity = 75/117 (64.10%), Postives = 89/117 (76.07%), Query Frame = 0


Query: 2   GVSLGEGSGATMSDDDDD-VPMEFSLDQSGSDAHDMMGFGPLLPTESERSLMERGWFVWD 61
           GVS GEG+ ATMSDD+DD V  + +L   G + HD MGFGPL+PTESERSLMER      
Sbjct: 273 GVSPGEGTSATMSDDEDDQVDSDANLFDEGMEGHDSMGFGPLIPTESERSLMER-----V 332

Query: 62  LEEVKNVMVFWLQGFKSRIEDVREEILRKRRAGKLPGDTTTVLKNWWQQHSKWPYPT 118
            +E+K+ +    QG+K +I D+REEILRKRRAGKLPGDTT+VLK WWQ HSKWPYPT
Sbjct: 333 RQELKHEL---KQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKAWWQSHSKWPYPT 381

[Close]

BLAST of Carg02498 vs. Swiss-Prot
Match: sp|Q94LW3|KNOS3_ORYSJ (Homeobox protein knotted-1-like 3 OS=Oryza sativa subsp. japonica OX=39947 GN=HOS66 PE=2 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 2.2e-31
Identity = 75/123 (60.98%), Postives = 87/123 (70.73%), Query Frame = 0


Query: 4   SLGEGSGATMS---------DDDDDVPMEFSLDQSGSDAHDMMGFGPLLPTESERSLMER 63
           SL + +GAT+          D+D+  PM       GSD HD+MGFGPL+PT+SERSLMER
Sbjct: 155 SLQDLTGATLEEXXXXXXXXDEDETAPMLEGPMDMGSDGHDLMGFGPLMPTDSERSLMER 214

Query: 64  GWFVWDLEEVKNVMVFWLQGFKSRIEDVREEILRKRRAGKLPGDTTTVLKNWWQQHSKWP 118
                  +E+K   +   QGFKSRIEDVREEILRKRRAGKLPGDTTT+LK WWQQHSKWP
Sbjct: 215 -----VRQELK---IELKQGFKSRIEDVREEILRKRRAGKLPGDTTTILKQWWQQHSKWP 269

[Close]

BLAST of Carg02498 vs. Swiss-Prot
Match: sp|P48001|KNAT4_ARATH (Homeobox protein knotted-1-like 4 OS=Arabidopsis thaliana OX=3702 GN=KNAT4 PE=1 SV=3)

HSP 1 Score: 133.3 bits (334), Expect = 3.2e-30
Identity = 74/122 (60.66%), Postives = 89/122 (72.95%), Query Frame = 0


Query: 2   GVSLGEGSGATMSDDDDDVPMEFSLDQSGSDAH------DMMGFGPLLPTESERSLMERG 61
           GVS GEG+GATMS+D+D        +Q  SDAH      D +GFGPL+PTESERSLMER 
Sbjct: 232 GVSPGEGTGATMSEDED--------EQVESDAHLFDGSLDGLGFGPLVPTESERSLMER- 291

Query: 62  WFVWDLEEVKNVMVFWLQGFKSRIEDVREEILRKRRAGKLPGDTTTVLKNWWQQHSKWPY 118
                 +E+K+ +    QG+K +I D+REEILRKRRAGKLPGDTT+VLK+WWQ HSKWPY
Sbjct: 292 ----VRQELKHEL---KQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPY 337

[Close]

BLAST of Carg02498 vs. TrEMBL
Match: tr|A0A1S3ATE3|A0A1S3ATE3_CUCME (homeobox protein knotted-1-like 7 OS=Cucumis melo OX=3656 GN=LOC103482695 PE=3 SV=1)

HSP 1 Score: 187.6 bits (475), Expect = 2.9e-44
Identity = 95/116 (81.90%), Postives = 103/116 (88.79%), Query Frame = 0


Query: 2   GVSLGEGSGATMSDDDDDVPMEFSLDQSGSDAHDMMGFGPLLPTESERSLMERGWFVWDL 61
           GVSLGEG+GATMSDD+DD+PM+FSLDQSG+DAHDMMGFGPLLPTESERSLMER       
Sbjct: 147 GVSLGEGTGATMSDDEDDIPMDFSLDQSGADAHDMMGFGPLLPTESERSLMER-----VR 206

Query: 62  EEVKNVMVFWLQGFKSRIEDVREEILRKRRAGKLPGDTTTVLKNWWQQHSKWPYPT 118
           +E+K   +   QGFKSRIEDVREEILRKRRAGKLPGDTTTVLKNWWQQHSKWPYPT
Sbjct: 207 QELK---IELKQGFKSRIEDVREEILRKRRAGKLPGDTTTVLKNWWQQHSKWPYPT 254

[Close]

BLAST of Carg02498 vs. TrEMBL
Match: tr|A0A0A0KKD3|A0A0A0KKD3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G156150 PE=3 SV=1)

HSP 1 Score: 187.6 bits (475), Expect = 2.9e-44
Identity = 95/116 (81.90%), Postives = 103/116 (88.79%), Query Frame = 0


Query: 2   GVSLGEGSGATMSDDDDDVPMEFSLDQSGSDAHDMMGFGPLLPTESERSLMERGWFVWDL 61
           GVSLGEG+GATMSDD+DD+PM+FSLDQSG+DAHDMMGFGPLLPTESERSLMER       
Sbjct: 148 GVSLGEGTGATMSDDEDDIPMDFSLDQSGADAHDMMGFGPLLPTESERSLMER-----VR 207

Query: 62  EEVKNVMVFWLQGFKSRIEDVREEILRKRRAGKLPGDTTTVLKNWWQQHSKWPYPT 118
           +E+K   +   QGFKSRIEDVREEILRKRRAGKLPGDTTTVLKNWWQQHSKWPYPT
Sbjct: 208 QELK---IELKQGFKSRIEDVREEILRKRRAGKLPGDTTTVLKNWWQQHSKWPYPT 255

[Close]

BLAST of Carg02498 vs. TrEMBL
Match: tr|A0A2P2LEW3|A0A2P2LEW3_RHIMU (Homeobox protein HD1 OS=Rhizophora mucronata OX=61149 PE=3 SV=1)

HSP 1 Score: 183.7 bits (465), Expect = 4.2e-43
Identity = 95/116 (81.90%), Postives = 101/116 (87.07%), Query Frame = 0


Query: 2   GVSLGEGSGATMSDDDDDVPMEFSLDQSGSDAHDMMGFGPLLPTESERSLMERGWFVWDL 61
           GV+LGEG+GATMSDD+DD+ MEFSLDQSGSD HDMMGFGPLLPTESERSLMER       
Sbjct: 149 GVTLGEGTGATMSDDEDDLQMEFSLDQSGSDGHDMMGFGPLLPTESERSLMER-----VR 208

Query: 62  EEVKNVMVFWLQGFKSRIEDVREEILRKRRAGKLPGDTTTVLKNWWQQHSKWPYPT 118
           +E+K   V   QGFKSRIEDVREEILRKRRAGKLPGDTTTVLKNWWQQHSKWPYPT
Sbjct: 209 QELK---VELKQGFKSRIEDVREEILRKRRAGKLPGDTTTVLKNWWQQHSKWPYPT 256

[Close]

BLAST of Carg02498 vs. TrEMBL
Match: tr|M5WA76|M5WA76_PRUPE (KNOPE7 OS=Prunus persica OX=3760 GN=KNOPE7 PE=2 SV=1)

HSP 1 Score: 183.0 bits (463), Expect = 7.2e-43
Identity = 94/116 (81.03%), Postives = 100/116 (86.21%), Query Frame = 0


Query: 2   GVSLGEGSGATMSDDDDDVPMEFSLDQSGSDAHDMMGFGPLLPTESERSLMERGWFVWDL 61
           GVSLGEGSGATMSDD+DD+ M+FSLDQSG D HDMMGFGPLLPTESERSLMER       
Sbjct: 138 GVSLGEGSGATMSDDEDDMQMDFSLDQSGGDGHDMMGFGPLLPTESERSLMER-----VR 197

Query: 62  EEVKNVMVFWLQGFKSRIEDVREEILRKRRAGKLPGDTTTVLKNWWQQHSKWPYPT 118
           +E+K   +   QGFKSRIEDVREEILRKRRAGKLPGDTTTVLKNWWQQHSKWPYPT
Sbjct: 198 QELK---IELKQGFKSRIEDVREEILRKRRAGKLPGDTTTVLKNWWQQHSKWPYPT 245

[Close]

BLAST of Carg02498 vs. TrEMBL
Match: tr|W9RYL6|W9RYL6_9ROSA (Homeobox protein knotted-1-like 7 OS=Morus notabilis OX=981085 GN=L484_023141 PE=3 SV=1)

HSP 1 Score: 181.0 bits (458), Expect = 2.7e-42
Identity = 92/117 (78.63%), Postives = 100/117 (85.47%), Query Frame = 0


Query: 2   GVSLGEGSGATMSDDDDDVPMEFSLDQSGSDAHDMMGFGPLLPTESERSLMERGWFVWDL 61
           GVSLGEG+GATMSDD+DD+ M+FS DQSG+D HDMMGFGPLLPTESERSLMER       
Sbjct: 144 GVSLGEGTGATMSDDEDDLQMDFSFDQSGADGHDMMGFGPLLPTESERSLMER------- 203

Query: 62  EEVKNVMVFWL-QGFKSRIEDVREEILRKRRAGKLPGDTTTVLKNWWQQHSKWPYPT 118
             V++ +   L QGFKSRIEDVREEILRKRRAGKLPGDTTTVLKNWWQQHSKWPYPT
Sbjct: 204 --VRHELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTTVLKNWWQQHSKWPYPT 251

The following BLAST results are available for this feature:

BLAST of Carg02498 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022958449.1	3.1e-45	85.34	homeobox protein knotted-1-like 7 [Cucurbita moschata]	[more]
XP_023532817.1	3.1e-45	85.34	homeobox protein knotted-1-like 7 isoform X1 [Cucurbita pepo subsp. pepo] >XP_02...	[more]
XP_004143939.1	4.4e-44	81.90	PREDICTED: homeobox protein knotted-1-like 7 [Cucumis sativus] >KGN50155.1 hypot...	[more]
XP_008437194.1	4.4e-44	81.90	PREDICTED: homeobox protein knotted-1-like 7 [Cucumis melo]	[more]
XP_022159793.1	4.4e-44	81.90	homeobox protein knotted-1-like 7 [Momordica charantia]	[more]

BLAST of Carg02498 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G62990.1	1.9e-41	73.11	KNOTTED-like homeobox of Arabidopsis thaliana 7	[more]
AT5G11060.1	1.8e-31	60.66	KNOTTED1-like homeobox gene 4	[more]
AT5G25220.1	3.1e-31	61.54	KNOTTED1-like homeobox gene 3	[more]
AT4G32040.1	9.8e-30	58.82	KNOTTED1-like homeobox gene 5	[more]
AT1G23380.2	9.0e-07	45.65	KNOTTED1-like homeobox gene 6	[more]

BLAST of Carg02498 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9FPQ8\|KNAT7_ARATH	3.4e-40	73.11	Homeobox protein knotted-1-like 7 OS=Arabidopsis thaliana OX=3702 GN=KNAT7 PE=1 ...	[more]
sp\|P46606\|HD1_BRANA	2.9e-39	72.27	Homeobox protein HD1 OS=Brassica napus OX=3708 GN=HD1 PE=2 SV=1	[more]
sp\|O04136\|KNAP3_MALDO	4.1e-33	64.10	Homeobox protein knotted-1-like 3 OS=Malus domestica OX=3750 PE=2 SV=1	[more]
sp\|Q94LW3\|KNOS3_ORYSJ	2.2e-31	60.98	Homeobox protein knotted-1-like 3 OS=Oryza sativa subsp. japonica OX=39947 GN=HO...	[more]
sp\|P48001\|KNAT4_ARATH	3.2e-30	60.66	Homeobox protein knotted-1-like 4 OS=Arabidopsis thaliana OX=3702 GN=KNAT4 PE=1 ...	[more]

BLAST of Carg02498 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3ATE3\|A0A1S3ATE3_CUCME	2.9e-44	81.90	homeobox protein knotted-1-like 7 OS=Cucumis melo OX=3656 GN=LOC103482695 PE=3 S...	[more]
tr\|A0A0A0KKD3\|A0A0A0KKD3_CUCSA	2.9e-44	81.90	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G156150 PE=3 SV=1	[more]
tr\|A0A2P2LEW3\|A0A2P2LEW3_RHIMU	4.2e-43	81.90	Homeobox protein HD1 OS=Rhizophora mucronata OX=61149 PE=3 SV=1	[more]
tr\|M5WA76\|M5WA76_PRUPE	7.2e-43	81.03	KNOPE7 OS=Prunus persica OX=3760 GN=KNOPE7 PE=2 SV=1	[more]
tr\|W9RYL6\|W9RYL6_9ROSA	2.7e-42	78.63	Homeobox protein knotted-1-like 7 OS=Morus notabilis OX=981085 GN=L484_023141 PE...	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg02498-RA	Carg02498-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..23
None	No IPR available	PANTHER	PTHR11850:SF74	HOMEOBOX PROTEIN KNOTTED-1-LIKE 7	coord: 2..117
None	No IPR available	PANTHER	PTHR11850	HOMEOBOX PROTEIN TRANSCRIPTION FACTORS	coord: 2..117

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg02498	Silver-seed gourd	carcarB643
Carg02498	Cucumber (Gy14) v2	carcgybB0906
Carg02498	Cucumber (Gy14) v2	carcgybB0912
Carg02498	Cucumber (Gy14) v2	carcgybB0913
Carg02498	Cucumber (Gy14) v1	carcgyB1042
Carg02498	Cucumber (Gy14) v1	carcgyB1043
Carg02498	Cucurbita maxima (Rimu)	carcmaB1261
Carg02498	Cucurbita maxima (Rimu)	carcmaB1264
Carg02498	Cucurbita maxima (Rimu)	carcmaB1268
Carg02498	Cucurbita moschata (Rifu)	carcmoB1230
Carg02498	Cucurbita moschata (Rifu)	carcmoB1234
Carg02498	Cucurbita moschata (Rifu)	carcmoB1237
Carg02498	Cucurbita pepo (Zucchini)	carcpeB1267
Carg02498	Cucurbita pepo (Zucchini)	carcpeB1271
Carg02498	Cucurbita pepo (Zucchini)	carcpeB1272
Carg02498	Cucurbita pepo (Zucchini)	carcpeB1282
Carg02498	Wild cucumber (PI 183967)	carcpiB0961
Carg02498	Wild cucumber (PI 183967)	carcpiB0955
Carg02498	Wild cucumber (PI 183967)	carcpiB0962
Carg02498	Cucumber (Chinese Long) v2	carcuB0933
Carg02498	Cucumber (Chinese Long) v2	carcuB0939
Carg02498	Cucumber (Chinese Long) v2	carcuB0940
Carg02498	Cucumber (Chinese Long) v3	carcucB0956
Carg02498	Cucumber (Chinese Long) v3	carcucB0963
Carg02498	Cucumber (Chinese Long) v3	carcucB0964
Carg02498	Bottle gourd (USVL1VR-Ls)	carlsiB841
Carg02498	Bottle gourd (USVL1VR-Ls)	carlsiB836
Carg02498	Bottle gourd (USVL1VR-Ls)	carlsiB837
Carg02498	Melon (DHL92) v3.5.1	carmeB0903
Carg02498	Melon (DHL92) v3.5.1	carmeB0911
Carg02498	Melon (DHL92) v3.6.1	carmedB0910
Carg02498	Melon (DHL92) v3.6.1	carmedB0918
Carg02498	Watermelon (Charleston Gray)	carwcgB0898
Carg02498	Watermelon (Charleston Gray)	carwcgB0899
Carg02498	Watermelon (Charleston Gray)	carwcgB0903
Carg02498	Watermelon (97103) v1	carwmB0920
Carg02498	Watermelon (97103) v1	carwmB0925
Carg02498	Watermelon (97103) v1	carwmB0926
Carg02498	Watermelon (97103) v2	carwmbB0963
Carg02498	Watermelon (97103) v2	carwmbB0969
Carg02498	Wax gourd	carwgoB1065