Carg02404 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAACTTTTAGAGTCACCTTCTTCGCCTCTGCATTTGGCTTCCATGAATTTACACTCCCGTCATCATCTCTTCCACTTTATTTTGCCCTAAAACCCACGGTCGATGCCTGCAAGTTCTTTCACGGTCGCCATTGCCGTCCCCATGTTCAAGGACCTCTCTACAAAATTGCCGAATGGGCGAAAGATCAAAGAGGTAACGTGCTTGGATTTGATTATGCTTCTTTTTCCTCTATTTAATCCATCAATTTAGCGTGTTTTCACGTCTTTCTTGGGTGAATCTTGAGTTTTGCTTGGTGTTTCAGATACAACCGTTGGTTTTTCTGCTACGAGCAAAAAAGCGGGAAAACGGAGAAGAAGAACGAAGAGGAGAGACGGGGATAGAGGCGATTTCAGTCAGAACTATGGCGCAGGAGACTCTGGGGGACTTTGGAACCCTAGCCACTGTTGCCTATGTTTTCTTGGGCTACACTTCTATGGTGGCCTATGTTTCCAAGTCGGGTGAGATCCTTCTCTAATCGTTCAATCTTCCATCTCCACTTACAGGCTACCTTTTCTCTTTGGTTTTTTCTCTGCTAGCCATAGATCAAATCAACCAATGGCTTACTGCTTGCATGAAAGGTAACTTCAGGATGTGAACCAGTATTATTGCCTCTCACCTCGAATCAGTTCTAATTTTCGGGACAAAAATTCAATTGAATGTTTAAAACATATCTTTTTCCGTGGAGAACAGCTCTTATGTTTTAATGCTGTACATAATGGTTCCAAATGTAGTATAATTTTCTATTGATATTGGATCTTAGAATCCGTTTTATAGACAAAAATAGAAAACTGTTCTGCAATCATTCTCTCAAATTCGCCGTATGTATTTTATACAAATGTGGGTAAAAATGATTAATCTCTAAGAACAAACAGAAGTCTCCTTTTATAGTCTGGAGGATGGAGTAATTATGAATATCAAATTCCTTTCCTTAATCGTTTTTTTGGTCAATTATTTCCCCCAAGCATACAATCTGTTCAATGGTCTCTCACCTTAAATTAGAATGCTCTTATTGTTAACCATTTCCCTTACTTTTATCCTTTTGTTTTTCAGTTTTTTTCCTCCTTTCCTGCGTTAGTTACATGAATTTGCTGAACCCCTGGAAAAAAATTTCGTGCAAGGAAAAACGGGCTATATCCTAGAATTAGACTCTTGAAAGTTTATGTCAAGCAAATTGATTTGTTTTTTCCGAGGTTTTGATCTTCAGTACTGCAGTAGACTAATACATATCAAAGTTTCTTTACAAATTCTTAACAGAGGAAAACTATGGAAATACCATATTGCTTATTTATGTGCATGAGTCTCCATCTTCAACAGATCGAGCCTGAGCGGAACTTGCTGCGAGCTGCTTGGTTTGGAAACAATCTTGAGATACACATTATGACATGTATGCAGTATCCGTCTCATAAATTGCAAACCCAAGGACCGAAATTTGCAGTGAGTTGTCATGGGGAAGGCCATAGAATGCCTCAGGCCAAGGATCAGAAAAAAAGGAGAAAGAAGAGCTGAGAAAAGACAAGATAGTGGAGATGGATGGCATTTTTTTTCCAAAGTGCTGCAAGTTAATGCAGTTGTTTCACTTATTCTTTATACTTCTCTGGAGTGGGCGAGTTTATATAGAGCTGAAGGAGATTGAAGCTCACTGAAATATCTAGTTATAAACCTTAATGACGAGTTACTTTCACTAAACCTCTGGGTCCTATGCCCTGACCCAGAAAGCAGGAGGAATAATATTTTGTGTTTGGAAAGAATTTGATATAATGCAATTATGCAGGCGAGTCTTAGAATTCCA AAACTTTTAGAGTCACCTTCTTCGCCTCTGCATTTGGCTTCCATGAATTTACACTCCCGTCATCATCTCTTCCACTTTATTTTGCCCTAAAACCCACGGTCGATGCCTGCAAGTTCTTTCACGGTCGCCATTGCCGTCCCCATGTTCAAGGACCTCTCTACAAAATTGCCGAATGGGCGAAAGATCAAAGAGATACAACCGTTGGTTTTTCTGCTACGAGCAAAAAAGCGGGAAAACGGAGAAGAAGAACGAAGAGGAGAGACGGGGATAGAGGCGATTTCAGTCAGAACTATGGCGCAGGAGACTCTGGGGGACTTTGGAACCCTAGCCACTGTTGCCTATGTTTTCTTGGGCTACACTTCTATGGTGGCCTATGTTTCCAAGTCGGGTGAGATCCTTCTCTAATCGTTCAATCTTCCATCTCCACTTACAGGCTACCTTTTCTCTTTGGTTTTTTCTCTGCTAGCCATAGATCAAATCAACCAATGGCTTACTGCTTGCATGAAAGATCGAGCCTGAGCGGAACTTGCTGCGAGCTGCTTGGTTTGGAAACAATCTTGAGATACACATTATGACATGTATGCAGTATCCGTCTCATAAATTGCAAACCCAAGGACCGAAATTTGCAGTGAGTTGTCATGGGGAAGGCCATAGAATGCCTCAGGCCAAGGATCAGAAAAAAAGGAGAAAGAAGAGCTGAGAAAAGACAAGATAGTGGAGATGGATGGCATTTTTTTTCCAAAGTGCTGCAAGTTAATGCAGTTGTTTCACTTATTCTTTATACTTCTCTGGAGTGGGCGAGTTTATATAGAGCTGAAGGAGATTGAAGCTCACTGAAATATCTAGTTATAAACCTTAATGACGAGTTACTTTCACTAAACCTCTGGGTCCTATGCCCTGACCCAGAAAGCAGGAGGAATAATATTTTGTGTTTGGAAAGAATTTGATATAATGCAATTATGCAGGCGAGTCTTAGAATTCCA ATGCCTGCAAGTTCTTTCACGGTCGCCATTGCCGTCCCCATGTTCAAGGACCTCTCTACAAAATTGCCGAATGGGCGAAAGATCAAAGAGATACAACCGTTGGTTTTTCTGCTACGAGCAAAAAAGCGGGAAAACGGAGAAGAAGAACGAAGAGGAGAGACGGGGATAGAGGCGATTTCAGTCAGAACTATGGCGCAGGAGACTCTGGGGGACTTTGGAACCCTAGCCACTGTTGCCTATGTTTTCTTGGGCTACACTTCTATGGTGGCCTATGTTTCCAAGTCGGGTGAGATCCTTCTCTAA MPASSFTVAIAVPMFKDLSTKLPNGRKIKEIQPLVFLLRAKKRENGEEERRGETGIEAISVRTMAQETLGDFGTLATVAYVFLGYTSMVAYVSKSGEILL
BLAST of Carg02404 vs. NCBI nr
Match: XP_023550384.1 (uncharacterized protein LOC111808551 isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 174.5 bits (441), Expect = 1.8e-40 Identity = 92/100 (92.00%), Postives = 95/100 (95.00%), Query Frame = 0
BLAST of Carg02404 vs. NCBI nr
Match: XP_023550385.1 (uncharacterized protein LOC111808551 isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 174.1 bits (440), Expect = 2.4e-40 Identity = 90/95 (94.74%), Postives = 93/95 (97.89%), Query Frame = 0
BLAST of Carg02404 vs. NCBI nr
Match: XP_022939144.1 (uncharacterized protein LOC111445140 [Cucurbita moschata]) HSP 1 Score: 94.7 bits (234), Expect = 1.8e-16 Identity = 49/52 (94.23%), Postives = 51/52 (98.08%), Query Frame = 0
BLAST of Carg02404 vs. NCBI nr
Match: XP_011657484.1 (PREDICTED: uncharacterized protein LOC101208104 [Cucumis sativus] >XP_011657486.1 PREDICTED: uncharacterized protein LOC101208104 [Cucumis sativus] >XP_011657487.1 PREDICTED: uncharacterized protein LOC101208104 [Cucumis sativus] >XP_011657488.1 PREDICTED: uncharacterized protein LOC101208104 [Cucumis sativus] >XP_011657489.1 PREDICTED: uncharacterized protein LOC101208104 [Cucumis sativus] >XP_011657490.1 PREDICTED: uncharacterized protein LOC101208104 [Cucumis sativus] >XP_011657491.1 PREDICTED: uncharacterized protein LOC101208104 [Cucumis sativus] >KGN47817.1 hypothetical protein Csa_6G405310 [Cucumis sativus]) HSP 1 Score: 92.0 bits (227), Expect = 1.2e-15 Identity = 53/67 (79.10%), Postives = 56/67 (83.58%), Query Frame = 0
BLAST of Carg02404 vs. NCBI nr
Match: XP_022954238.1 (uncharacterized protein LOC111456551 [Cucurbita moschata] >XP_022954246.1 uncharacterized protein LOC111456551 [Cucurbita moschata] >XP_022954253.1 uncharacterized protein LOC111456551 [Cucurbita moschata] >XP_022954261.1 uncharacterized protein LOC111456551 [Cucurbita moschata]) HSP 1 Score: 82.0 bits (201), Expect = 1.2e-12 Identity = 48/65 (73.85%), Postives = 53/65 (81.54%), Query Frame = 0
BLAST of Carg02404 vs. TrEMBL
Match: tr|A0A0A0KHF6|A0A0A0KHF6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G405310 PE=4 SV=1) HSP 1 Score: 92.0 bits (227), Expect = 7.9e-16 Identity = 53/67 (79.10%), Postives = 56/67 (83.58%), Query Frame = 0
BLAST of Carg02404 vs. TrEMBL
Match: tr|A0A1S4E1A6|A0A1S4E1A6_CUCME (tyrosine-specific transport protein 1-like isoform X3 OS=Cucumis melo OX=3656 GN=LOC103496418 PE=4 SV=1) HSP 1 Score: 80.9 bits (198), Expect = 1.8e-12 Identity = 43/48 (89.58%), Postives = 45/48 (93.75%), Query Frame = 0
BLAST of Carg02404 vs. TrEMBL
Match: tr|A0A1S4E201|A0A1S4E201_CUCME (tyrosine-specific transport protein 1-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103496418 PE=4 SV=1) HSP 1 Score: 80.9 bits (198), Expect = 1.8e-12 Identity = 43/48 (89.58%), Postives = 45/48 (93.75%), Query Frame = 0
BLAST of Carg02404 vs. TrEMBL
Match: tr|A0A1S4E1A5|A0A1S4E1A5_CUCME (tyrosine-specific transport protein 1-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103496418 PE=4 SV=1) HSP 1 Score: 80.9 bits (198), Expect = 1.8e-12 Identity = 43/48 (89.58%), Postives = 45/48 (93.75%), Query Frame = 0
BLAST of Carg02404 vs. TrEMBL
Match: tr|A0A2P5BQC0|A0A2P5BQC0_9ROSA (Tryptophan/tyrosine permease OS=Trema orientalis OX=63057 GN=TorRG33x02_312670 PE=4 SV=1) HSP 1 Score: 76.6 bits (187), Expect = 3.4e-11 Identity = 44/60 (73.33%), Postives = 50/60 (83.33%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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