Carg02342 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGGCTTGGAATTCTAAGATCCATTGTCCGACCCCTAACGAGGATCGCCACTTCCCGACCACCATGTCCGGTCACTTCCACTTCCGCGAAACTGGGGTTTCATGTCCCTTCAACTCAAGCTCCTTGGTCGTTCCAAATTGGGAACCATTTCCACAGTTTGACCGACACTCGGTTTCCGAAGAGACGGCCCAGTGATAAAGCTCCTTGTTCTTTGAATTGGATGTTTGATTCCATGAATTAATGGTTTCAAATGCTTTGTTTTCTGAATGGCAGGGCCATATGCTTGGGTTCAATATACCCCTGGTGACCCAATTCTTCCCAATCAACCGAATGAAGGGAGCATTTATTCTGGTTCGTATGTTATGATATAATCAACTTTGAAGCATTGTTTTGGTGACTTTTCTCTTCTTTACTGGCTTCATAGCTCCATAACCATTGCTGTGCTTTGCTGTTCTATTATAAACTGTCTAGTGAACTGCACATTGTGGTATGCTAGGTGGATGTCCCACGTTTTAAAGTCTTAAGGGGAAAAGCCTAAAGAGGATAATATCTGCTAGCGGTGGATTTGGGGCGTTACAAATGGTATCAGAGTCAGACACTGAATGATGTGCTAGCCTTCTCGCTGTTCCCCAAAGGGGTAGACACGAGGCGGTATGCCAGTAAAGACGCTGGCCCTAAAAGGGGTGGATTGTGATGTCCTATGTTGGTTTGGGAAGAGAACAAACCTCCTTTATAAGGGTGTGGAAACCTTCCACTAGTAGATGCGTTTTGAAGCTTTGAGGGGAAGCCCGAAAGGGAAAGTCCAAAGAGGACAATATATGCCAATGGTGGAACTGGGGTGTTACACTAGCTGAATACATATAAATCATGACTTGAATAGGTTATTCTCACGGCTGCAAATAGGCCCGGGAGAGGTTTTCACCCATTTATAAAGAATGTTCGCTCCCCCTCTAACTAACGTGGGATCTCACAGTCCACCTCAAGGAGAGGTTTTCACACTCTTGTAAAGAATGATTCGTTTCACTCTCCAACCAATGTGGGATCTCACAATCTACCTCCTTTGAGGCTCAGCTCTACTCTCCTTGATACTATTTATAACAATCTAAACCCACAGTTAGTAGATATTGTCCTCTTTGTACTTTCCCTTCTAACCTTCTCCTTAAGGTTTTAAAACGCGCATGTTAGGGAAAGGTTTTCACATCCTTAAAACGTTTAGTTCCCTTCTCCAATCAAAGTGGGATCTCACAATTCAACACTAGCGTTTTAGAAGATATTTGGAGAAGTGGGAGGGCTTGAAAGGCTGAAATTGTGGAAGCTTGTAACGGGATTTGCTAATGTGCGTATAACTTAGTTAGTTAACGCGTATATCCTCGATTGGTGTGAAATTTGTTCATGGAATTAAACGTGTCCCCTTCCCCTTTGTTCATGGTTAAGGCGTATACTCTCAACCAATGAGTCCGATACATTTATGTACCATTACCAAAAGACTTGCTGGTTGGTATGTGCAGGCTGAAAAAAAGAAGAGGAAAGCTCAGCTTCAAGAGGCAAAGAAGAAGAAAAAACTAAGTTACGATCAAAGTTCAGACATAGACAGCAAACCTGTCCTGTCTTTTGGTAACCTAGTACACATACACAGACAGAAAAACTAGGATCAAGACATAACTCCATTATTTCTGAAACTCAGAGTTGTATTATTCTATAGTAGTCCAATAGATGGATGTTTGTGTGTGTCATGATGATGAAGGAGACTCATTGATTGGTTCTCGATGTGTCTGAGCCAGCCATGACTTGACTTAGAGTAGAGGTAAGTCGGTTAGAGTCGCAACGAGTTGGTGATGTTAGTTTCTGCATGAATTGTGTTCCGTTAACAGAGGAGAACCTCGCCTATGATTCAATGAATAGAACTTGAGTTCTTTCTTAGTCTTTTCATGAACAGGTCGAGATCATGACGACCGTGTGAAAAGGGTACTGATTGAATGCAAAATCTTAAATCAAATTTACCCCAACTACACGGCATTTGTTTTTGTATGTAAGAATCTAAGCCACCACACAGCCTACGGGTATCAGTATT ATGGGGCTTGGAATTCTAAGATCCATTGTCCGACCCCTAACGAGGATCGCCACTTCCCGACCACCATGTCCGGTCACTTCCACTTCCGCGAAACTGGGGTTTCATGTCCCTTCAACTCAAGCTCCTTGGTCGTTCCAAATTGGGAACCATTTCCACAGTTTGACCGACACTCGGTTTCCGAAGAGACGGCCCAGGCCATATGCTTGGGTTCAATATACCCCTGGTGACCCAATTCTTCCCAATCAACCGAATGAAGGGAGCATTTATTCTGGTTCGTATGCTGAAAAAAAGAAGAGGAAAGCTCAGCTTCAAGAGGCAAAGAAGAAGAAAAAACTAAGTTACGATCAAAGTTCAGACATAGACAGCAAACCTGTCCTGTCTTTTGGTAACCTAGTACACATACACAGACAGAAAAACTAGGATCAAGACATAACTCCATTATTTCTGAAACTCAGAGTTGTATTATTCTATAGTAGTCCAATAGATGGATGTTTGTGTGTGTCATGATGATGAAGGAGACTCATTGATTGGTTCTCGATGTGTCTGAGCCAGCCATGACTTGACTTAGAGTAGAGGTAAGTCGGTTAGAGTCGCAACGAGTTGGTGATGTTAGTTTCTGCATGAATTGTGTTCCGTTAACAGAGGAGAACCTCGCCTATGATTCAATGAATAGAACTTGAGTTCTTTCTTAGTCTTTTCATGAACAGGTCGAGATCATGACGACCGTGTGAAAAGGGTACTGATTGAATGCAAAATCTTAAATCAAATTTACCCCAACTACACGGCATTTGTTTTTGTATGTAAGAATCTAAGCCACCACACAGCCTACGGGTATCAGTATT ATGGGGCTTGGAATTCTAAGATCCATTGTCCGACCCCTAACGAGGATCGCCACTTCCCGACCACCATGTCCGGTCACTTCCACTTCCGCGAAACTGGGGTTTCATGTCCCTTCAACTCAAGCTCCTTGGTCGTTCCAAATTGGGAACCATTTCCACAGTTTGACCGACACTCGGTTTCCGAAGAGACGGCCCAGGCCATATGCTTGGGTTCAATATACCCCTGGTGACCCAATTCTTCCCAATCAACCGAATGAAGGGAGCATTTATTCTGGTTCGTATGCTGAAAAAAAGAAGAGGAAAGCTCAGCTTCAAGAGGCAAAGAAGAAGAAAAAACTAAGTTACGATCAAAGTTCAGACATAGACAGCAAACCTGTCCTGTCTTTTGGTAACCTAGTACACATACACAGACAGAAAAACTAG MGLGILRSIVRPLTRIATSRPPCPVTSTSAKLGFHVPSTQAPWSFQIGNHFHSLTDTRFPKRRPRPYAWVQYTPGDPILPNQPNEGSIYSGSYAEKKKRKAQLQEAKKKKKLSYDQSSDIDSKPVLSFGNLVHIHRQKN
BLAST of Carg02342 vs. NCBI nr
Match: XP_022992813.1 (uncharacterized protein LOC111489033 [Cucurbita maxima]) HSP 1 Score: 166.8 bits (421), Expect = 5.3e-38 Identity = 88/129 (68.22%), Postives = 92/129 (71.32%), Query Frame = 0
BLAST of Carg02342 vs. NCBI nr
Match: XP_022132599.1 (uncharacterized protein LOC111005424 [Momordica charantia]) HSP 1 Score: 125.6 bits (314), Expect = 1.4e-25 Identity = 76/138 (55.07%), Postives = 83/138 (60.14%), Query Frame = 0
BLAST of Carg02342 vs. NCBI nr
Match: XP_008466941.1 (PREDICTED: uncharacterized protein LOC103504316 [Cucumis melo]) HSP 1 Score: 118.6 bits (296), Expect = 1.7e-23 Identity = 72/139 (51.80%), Postives = 82/139 (58.99%), Query Frame = 0
BLAST of Carg02342 vs. NCBI nr
Match: XP_004142815.1 (PREDICTED: uncharacterized protein LOC101208398 [Cucumis sativus] >KGN51446.1 hypothetical protein Csa_5G548120 [Cucumis sativus]) HSP 1 Score: 118.2 bits (295), Expect = 2.2e-23 Identity = 71/139 (51.08%), Postives = 82/139 (58.99%), Query Frame = 0
BLAST of Carg02342 vs. NCBI nr
Match: XP_022963246.1 (uncharacterized protein LOC111463516 [Cucurbita moschata]) HSP 1 Score: 115.9 bits (289), Expect = 1.1e-22 Identity = 72/139 (51.80%), Postives = 82/139 (58.99%), Query Frame = 0
BLAST of Carg02342 vs. TAIR10
Match: AT3G51010.1 (unknown protein) HSP 1 Score: 78.2 bits (191), Expect = 4.5e-15 Identity = 57/142 (40.14%), Postives = 69/142 (48.59%), Query Frame = 0
BLAST of Carg02342 vs. TrEMBL
Match: tr|A0A1S3CSD0|A0A1S3CSD0_CUCME (uncharacterized protein LOC103504316 OS=Cucumis melo OX=3656 GN=LOC103504316 PE=4 SV=1) HSP 1 Score: 118.6 bits (296), Expect = 1.1e-23 Identity = 72/139 (51.80%), Postives = 82/139 (58.99%), Query Frame = 0
BLAST of Carg02342 vs. TrEMBL
Match: tr|A0A0A0KUQ0|A0A0A0KUQ0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G548120 PE=4 SV=1) HSP 1 Score: 118.2 bits (295), Expect = 1.4e-23 Identity = 71/139 (51.08%), Postives = 82/139 (58.99%), Query Frame = 0
BLAST of Carg02342 vs. TrEMBL
Match: tr|A0A2P4MTD8|A0A2P4MTD8_QUESU (Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_70382 PE=4 SV=1) HSP 1 Score: 106.7 bits (265), Expect = 4.3e-20 Identity = 67/141 (47.52%), Postives = 77/141 (54.61%), Query Frame = 0
BLAST of Carg02342 vs. TrEMBL
Match: tr|A0A067E8W4|A0A067E8W4_CITSI (Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g030229mg PE=4 SV=1) HSP 1 Score: 105.9 bits (263), Expect = 7.4e-20 Identity = 66/138 (47.83%), Postives = 77/138 (55.80%), Query Frame = 0
BLAST of Carg02342 vs. TrEMBL
Match: tr|A0A1S3VBS0|A0A1S3VBS0_VIGRR (uncharacterized protein LOC106773601 OS=Vigna radiata var. radiata OX=3916 GN=LOC106773601 PE=4 SV=1) HSP 1 Score: 105.1 bits (261), Expect = 1.3e-19 Identity = 63/135 (46.67%), Postives = 81/135 (60.00%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |