Carg01879 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg01879
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Beta-glucuronosyltransferase
Location	Cucurbita_argyrosperma_scaffold_003 : 917121 .. 917880 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGTGTTCAAACGCGGCACGATGCAATGGGAAGATAGTGACGTCAACGCATTGGTCCACTAAAAATTTTCACCTCAAATTATAAATTTATTCTCATAATTTTGTTAAAATACAATGTTATTCTTTTATCTGTATAATAAAGTTTTTAATTTTTAAAAATTATTTATACTTTCAAATTTGCAAAATTTAATTTTAAAATTTTAAAAATTTGTTAGAAGCATTTTCGTTGAAGAATATTACATTTCTGGATAATAATAAAATTATAATTATTTTAAAATATCAAAATTTTAATAATAAAATTATTATAAAAGTTTAAATACCAAGAGAAATTTTAAAATCATAATTATTATCGTAAGTAGAAAAGAAAATCCGACGGTATAAAAGGAGCGGTAAAAAATGGAGTTCAACTGAACGCGCCACTGGAGAGCGTGATATCGACGATCCTTTTCTTATACGTTTTTTTGGAGCGAGAAGAAAAAGAAAGGATAGGATATTTGGGCTGATACTCGCCGTCCGATGGAGATCGGCGACAGCTAGCCGCGGCGGTGAAGTCTGTTCCGGCGACGTTTGGGAATGTGGACGTTGCTGGTAAGCCCGATCGTATGACTTACAATGGATCCTCTTACCTTGCCACGACTTTGCATGCTGCAGCGGTTCTGCTCGAGATTGACTGTGGCTGGGATTGGTTTATCACTTTGAGTGTGATGGATTATGCCAATTGGTTGAATCTCGATTGTTCTGCATACTTTTCTGGTTAA

mRNA sequence

ATGGAGTATCGGCGACAGCTAGCCGCGGCGGTGAAGTCTGTTCCGGCGACGTTTGGGAATGTGGACGTTGCTGGTAAGCCCGATCGTATGACTTACAATGGATCCTCTTACCTTGCCACGACTTTGCATGCTGCAGCGGTTCTGCTCGAGATTGACTGTGGCTGGGATTGGTTTATCACTTTGAGTGTGATGGATTATGCCAATTGGTTGAATCTCGATTGTTCTGCATACTTTTCTGGTTAA

Coding sequence (CDS)

ATGGAGTATCGGCGACAGCTAGCCGCGGCGGTGAAGTCTGTTCCGGCGACGTTTGGGAATGTGGACGTTGCTGGTAAGCCCGATCGTATGACTTACAATGGATCCTCTTACCTTGCCACGACTTTGCATGCTGCAGCGGTTCTGCTCGAGATTGACTGTGGCTGGGATTGGTTTATCACTTTGAGTGTGATGGATTATGCCAATTGGTTGAATCTCGATTGTTCTGCATACTTTTCTGGTTAA

Protein sequence

MEYRRQLAAAVKSVPATFGNVDVAGKPDRMTYNGSSYLATTLHAAAVLLEIDCGWDWFITLSVMDYANWLNLDCSAYFSG

Homology

[Close]

BLAST of Carg01879 vs. NCBI nr
Match: XP_022150608.1 (beta-glucuronosyltransferase GlcAT14A-like [Momordica charantia])

HSP 1 Score: 109.8 bits (273), Expect = 4.4e-21
Identity = 52/65 (80.00%), Postives = 59/65 (90.77%), Query Frame = 0


Query: 4   RRQLAAAVKSVPA--TFGNVDVAGKPDRMTYNGSSYLATTLHAAAVLLEIDCGWDWFITL 63
           R+QLAAAVKS+PA  TFGNVDV GKPDR+TY+GSSY+AT LHAAA+LL+ID GWDWFITL
Sbjct: 91  RQQLAAAVKSIPAIRTFGNVDVVGKPDRVTYSGSSYIATILHAAAILLKIDSGWDWFITL 150

Query: 64  SVMDY 67
           S MDY
Sbjct: 151 SAMDY 155

[Close]

BLAST of Carg01879 vs. NCBI nr
Match: XP_008446701.1 (PREDICTED: beta-glucuronosyltransferase GlcAT14A [Cucumis melo])

HSP 1 Score: 106.7 bits (265), Expect = 3.8e-20
Identity = 51/65 (78.46%), Postives = 57/65 (87.69%), Query Frame = 0


Query: 4   RRQLAAAVKSVPA--TFGNVDVAGKPDRMTYNGSSYLATTLHAAAVLLEIDCGWDWFITL 63
           R+QLAAAVKSVPA   FGNVD+ GKPDRMTY+GSSY+A TLHAAA+LL+ID GWDWFITL
Sbjct: 91  RQQLAAAVKSVPAIRAFGNVDLVGKPDRMTYSGSSYIAATLHAAAILLKIDSGWDWFITL 150

Query: 64  SVMDY 67
           S  DY
Sbjct: 151 SAKDY 155

[Close]

BLAST of Carg01879 vs. NCBI nr
Match: XP_004135058.1 (PREDICTED: xylosyltransferase 1 [Cucumis sativus] >KGN52143.1 hypothetical protein Csa_5G611740 [Cucumis sativus])

HSP 1 Score: 105.9 bits (263), Expect = 6.4e-20
Identity = 51/65 (78.46%), Postives = 56/65 (86.15%), Query Frame = 0


Query: 4   RRQLAAAVKSVPA--TFGNVDVAGKPDRMTYNGSSYLATTLHAAAVLLEIDCGWDWFITL 63
           R+QLA AVKSVPA   FGNVDV GKPDRMTY+GSSY+A TLHAAA+LL+ID GWDWFITL
Sbjct: 91  RQQLAEAVKSVPAIRAFGNVDVVGKPDRMTYSGSSYIAATLHAAAILLKIDSGWDWFITL 150

Query: 64  SVMDY 67
           S  DY
Sbjct: 151 SAKDY 155

[Close]

BLAST of Carg01879 vs. NCBI nr
Match: XP_008353057.1 (PREDICTED: beta-glucuronosyltransferase GlcAT14A-like [Malus domestica])

HSP 1 Score: 102.8 bits (255), Expect = 5.4e-19
Identity = 51/80 (63.75%), Postives = 61/80 (76.25%), Query Frame = 0


Query: 2   EYRRQLAAAVKSVPA--TFGNVDVAGKPDRMTYNGSSYLATTLHAAAVLLEIDCGWDWFI 61
           E RR+LAAA+K+VPA   FGNVDV GKPDR+TY GS+ +ATTL AAA+LL++D GWDWF+
Sbjct: 89  EERRRLAAAIKAVPAIQAFGNVDVVGKPDRITYMGSTNIATTLRAAAILLKVDSGWDWFV 148

Query: 62  TLSVMDYANWLNLDCSAYFS 80
           TLS MDY      D S  FS
Sbjct: 149 TLSAMDYPLITQDDLSHVFS 168

[Close]

BLAST of Carg01879 vs. NCBI nr
Match: XP_008368205.1 (PREDICTED: beta-glucuronosyltransferase GlcAT14A-like [Malus domestica])

HSP 1 Score: 102.8 bits (255), Expect = 5.4e-19
Identity = 51/80 (63.75%), Postives = 61/80 (76.25%), Query Frame = 0


Query: 2   EYRRQLAAAVKSVPA--TFGNVDVAGKPDRMTYNGSSYLATTLHAAAVLLEIDCGWDWFI 61
           E RR+LAAA+K+VPA   FGNVDV GKPDR+TY GS+ +ATTL AAA+LL++D GWDWF+
Sbjct: 89  EERRRLAAAIKAVPAIQAFGNVDVVGKPDRITYMGSTNIATTLRAAAILLKVDSGWDWFV 148

Query: 62  TLSVMDYANWLNLDCSAYFS 80
           TLS MDY      D S  FS
Sbjct: 149 TLSAMDYPLITQDDLSHVFS 168

[Close]

BLAST of Carg01879 vs. TAIR10
Match: AT1G71070.1 (Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein)

HSP 1 Score: 75.9 bits (185), Expect = 1.3e-14
Identity = 39/78 (50.00%), Postives = 53/78 (67.95%), Query Frame = 0


Query: 4   RRQLAAAVKSVPA--TFGNVDVAGKPDRMTYNGSSYLATTLHAAAVLLEIDCGWDWFITL 63
           R  L + +KSVPA   FGNVDV GK DR++ NG+S +A+TLHA ++LL++D  W+WFI L
Sbjct: 90  RLALLSDLKSVPAVNAFGNVDVLGKVDRLSENGASKIASTLHAVSILLKLDPTWNWFIEL 149

Query: 64  SVMDYANWLNLDCSAYFS 80
           S +DY      D S  F+
Sbjct: 150 SALDYPLITQDDLSHVFA 167

[Close]

BLAST of Carg01879 vs. TAIR10
Match: AT3G24040.1 (Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein)

HSP 1 Score: 62.8 bits (151), Expect = 1.1e-10
Identity = 32/65 (49.23%), Postives = 42/65 (64.62%), Query Frame = 0


Query: 4   RRQLAAAVKSVP--ATFGNVDVAGKPDRMTYNGSSYLATTLHAAAVLLEIDCGWDWFITL 63
           R +LA  V+ VP      NVDV GKPD     GSS +A+TLH A++LL +   WDWF+++
Sbjct: 110 RDRLAVDVQDVPIFRAARNVDVIGKPDFAYQRGSSPMASTLHGASILLRLSGTWDWFVSI 169

Query: 64  SVMDY 67
           SV DY
Sbjct: 170 SVDDY 174

[Close]

BLAST of Carg01879 vs. TAIR10
Match: AT3G03690.1 (Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein)

HSP 1 Score: 62.0 bits (149), Expect = 1.9e-10
Identity = 29/48 (60.42%), Postives = 34/48 (70.83%), Query Frame = 0


Query: 19  GNVDVAGKPDRMTYNGSSYLATTLHAAAVLLEIDCGWDWFITLSVMDY 67
           GNV + GKP+ +TY G + LATTLHA A+LL   C WDWFI LS  DY
Sbjct: 112 GNVMIVGKPNLVTYRGPTMLATTLHAMALLLRC-CRWDWFINLSASDY 158

[Close]

BLAST of Carg01879 vs. TAIR10
Match: AT2G37585.1 (Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein)

HSP 1 Score: 59.3 bits (142), Expect = 1.2e-09
Identity = 31/65 (47.69%), Postives = 38/65 (58.46%), Query Frame = 0


Query: 2   EYRRQLAAAVKSVPATFGNVDVAGKPDRMTYNGSSYLATTLHAAAVLLEIDCGWDWFITL 61
           E R +LA  V+S    F NV V G  D +T  G + LA+TLH  A+LL+    WDWFI L
Sbjct: 98  EERMELAKYVRSEKKKFENVMVMGLADLVTEKGPTMLASTLHGVAILLKKAKDWDWFINL 157

Query: 62  SVMDY 67
           S  DY
Sbjct: 158 SASDY 162

[Close]

BLAST of Carg01879 vs. TAIR10
Match: AT4G27480.1 (Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein)

HSP 1 Score: 58.5 bits (140), Expect = 2.1e-09
Identity = 34/81 (41.98%), Postives = 43/81 (53.09%), Query Frame = 0


Query: 2   EYRRQLAAAVKSVP--ATFGNVDVAGKPDRMTYNGSSYLATTLHAAAVLLEIDCGWDWFI 61
           E R +LA  V   P  +  GNV +  K + +TY G + +A TLHA A+LL+    WDWFI
Sbjct: 119 EERLELAKRVSQDPVFSDVGNVHMITKANLVTYRGPTMVANTLHACAILLKQSKEWDWFI 178

Query: 62  TLSVMDYANWLNLDCSAYFSG 81
            LS  DY      D    FSG
Sbjct: 179 NLSASDYPLVTQDDLIDTFSG 199

[Close]

BLAST of Carg01879 vs. Swiss-Prot
Match: sp|Q8S8P3|GT14C_ARATH (Beta-glucuronosyltransferase GlcAT14C OS=Arabidopsis thaliana OX=3702 GN=GLCAT14C PE=2 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 2.2e-08
Identity = 31/65 (47.69%), Postives = 38/65 (58.46%), Query Frame = 0


Query: 2   EYRRQLAAAVKSVPATFGNVDVAGKPDRMTYNGSSYLATTLHAAAVLLEIDCGWDWFITL 61
           E R +LA  V+S    F NV V G  D +T  G + LA+TLH  A+LL+    WDWFI L
Sbjct: 98  EERMELAKYVRSEKKKFENVMVMGLADLVTEKGPTMLASTLHGVAILLKKAKDWDWFINL 157

Query: 62  SVMDY 67
           S  DY
Sbjct: 158 SASDY 162

[Close]

BLAST of Carg01879 vs. Swiss-Prot
Match: sp|Q9FLD7|GT14A_ARATH (Beta-glucuronosyltransferase GlcAT14A OS=Arabidopsis thaliana OX=3702 GN=GLCAT14A PE=2 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 2.5e-07
Identity = 30/67 (44.78%), Postives = 39/67 (58.21%), Query Frame = 0


Query: 2   EYRRQLAAAVK--SVPATFGNVDVAGKPDRMTYNGSSYLATTLHAAAVLLEIDCGWDWFI 61
           E R +L   +K  S+   F NV +  K + +TY G + +A TLHAAA+LL     WDWFI
Sbjct: 140 EEREELHGYIKNSSLFRRFMNVHMIEKANLVTYRGPTMVANTLHAAAILLREGADWDWFI 199

Query: 62  TLSVMDY 67
            LS  DY
Sbjct: 200 NLSSSDY 206

[Close]

BLAST of Carg01879 vs. Swiss-Prot
Match: sp|Q9LFQ0|GT14B_ARATH (Beta-glucuronosyltransferase GlcAT14B OS=Arabidopsis thaliana OX=3702 GN=GLCAT14B PE=2 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 2.1e-06
Identity = 25/49 (51.02%), Postives = 31/49 (63.27%), Query Frame = 0


Query: 18  FGNVDVAGKPDRMTYNGSSYLATTLHAAAVLLEIDCGWDWFITLSVMDY 67
           F NV +  K + +TY G + +A TLHAAA+LL     WDWFI LS  DY
Sbjct: 145 FQNVRMIVKANFVTYRGPTMVANTLHAAAILLREGGDWDWFINLSASDY 193

[Close]

BLAST of Carg01879 vs. TrEMBL
Match: tr|A0A1S3BF77|A0A1S3BF77_CUCME (beta-glucuronosyltransferase GlcAT14A OS=Cucumis melo OX=3656 GN=LOC103489344 PE=4 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 2.5e-20
Identity = 51/65 (78.46%), Postives = 57/65 (87.69%), Query Frame = 0


Query: 4   RRQLAAAVKSVPA--TFGNVDVAGKPDRMTYNGSSYLATTLHAAAVLLEIDCGWDWFITL 63
           R+QLAAAVKSVPA   FGNVD+ GKPDRMTY+GSSY+A TLHAAA+LL+ID GWDWFITL
Sbjct: 91  RQQLAAAVKSVPAIRAFGNVDLVGKPDRMTYSGSSYIAATLHAAAILLKIDSGWDWFITL 150

Query: 64  SVMDY 67
           S  DY
Sbjct: 151 SAKDY 155

[Close]

BLAST of Carg01879 vs. TrEMBL
Match: tr|A0A0A0KRB3|A0A0A0KRB3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G611740 PE=4 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 4.2e-20
Identity = 51/65 (78.46%), Postives = 56/65 (86.15%), Query Frame = 0


Query: 4   RRQLAAAVKSVPA--TFGNVDVAGKPDRMTYNGSSYLATTLHAAAVLLEIDCGWDWFITL 63
           R+QLA AVKSVPA   FGNVDV GKPDRMTY+GSSY+A TLHAAA+LL+ID GWDWFITL
Sbjct: 91  RQQLAEAVKSVPAIRAFGNVDVVGKPDRMTYSGSSYIAATLHAAAILLKIDSGWDWFITL 150

Query: 64  SVMDY 67
           S  DY
Sbjct: 151 SAKDY 155

[Close]

BLAST of Carg01879 vs. TrEMBL
Match: tr|M5XRI5|M5XRI5_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G322800 PE=4 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 1.0e-18
Identity = 50/78 (64.10%), Postives = 60/78 (76.92%), Query Frame = 0


Query: 4   RRQLAAAVKSVPA--TFGNVDVAGKPDRMTYNGSSYLATTLHAAAVLLEIDCGWDWFITL 63
           RR+LA+A+K+VPA   FGNVDV GKPDR+TY GSS +ATTL AAA+LL++D GWDWF+TL
Sbjct: 91  RRRLASAIKAVPAIRAFGNVDVVGKPDRITYMGSSNIATTLRAAAILLKVDSGWDWFVTL 150

Query: 64  SVMDYANWLNLDCSAYFS 80
           S MDY      D S  FS
Sbjct: 151 SAMDYPLITQDDLSHVFS 168

[Close]

BLAST of Carg01879 vs. TrEMBL
Match: tr|A0A2P6R396|A0A2P6R396_ROSCH (Putative glucuronosyltransferase OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr4g0440961 PE=4 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 1.0e-18
Identity = 52/78 (66.67%), Postives = 60/78 (76.92%), Query Frame = 0


Query: 4   RRQLAAAVKSVPA--TFGNVDVAGKPDRMTYNGSSYLATTLHAAAVLLEIDCGWDWFITL 63
           RR+LA+AVK+VPA   FGNVDV GKPDR+TY GSS LATTL AAA+LL++D GWDWFITL
Sbjct: 91  RRRLASAVKAVPAVRAFGNVDVVGKPDRITYMGSSNLATTLRAAAILLKVDSGWDWFITL 150

Query: 64  SVMDYANWLNLDCSAYFS 80
           S +DY      D S  FS
Sbjct: 151 SAVDYPLVTQDDLSHVFS 168

[Close]

BLAST of Carg01879 vs. TrEMBL
Match: tr|A0A2I4GG81|A0A2I4GG81_9ROSI (beta-glucuronosyltransferase GlcAT14A-like OS=Juglans regia OX=51240 GN=LOC109007616 PE=4 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 5.2e-18
Identity = 51/80 (63.75%), Postives = 60/80 (75.00%), Query Frame = 0


Query: 2   EYRRQLAAAVKSVPA--TFGNVDVAGKPDRMTYNGSSYLATTLHAAAVLLEIDCGWDWFI 61
           E RR+LAA+V+SVPA   FGNVDV GKPDR+TY GSS +A+TL AAA+LL +D GW+WFI
Sbjct: 81  EERRRLAASVRSVPAIRAFGNVDVVGKPDRLTYMGSSNIASTLRAAAILLRMDGGWNWFI 140

Query: 62  TLSVMDYANWLNLDCSAYFS 80
           TLS MDY      D S  FS
Sbjct: 141 TLSAMDYPLLTQDDLSHVFS 160

The following BLAST results are available for this feature:

BLAST of Carg01879 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022150608.1	4.4e-21	80.00	beta-glucuronosyltransferase GlcAT14A-like [Momordica charantia]	[more]
XP_008446701.1	3.8e-20	78.46	PREDICTED: beta-glucuronosyltransferase GlcAT14A [Cucumis melo]	[more]
XP_004135058.1	6.4e-20	78.46	PREDICTED: xylosyltransferase 1 [Cucumis sativus] >KGN52143.1 hypothetical prote...	[more]
XP_008353057.1	5.4e-19	63.75	PREDICTED: beta-glucuronosyltransferase GlcAT14A-like [Malus domestica]	[more]
XP_008368205.1	5.4e-19	63.75	PREDICTED: beta-glucuronosyltransferase GlcAT14A-like [Malus domestica]	[more]

BLAST of Carg01879 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G71070.1	1.3e-14	50.00	Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein	[more]
AT3G24040.1	1.1e-10	49.23	Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein	[more]
AT3G03690.1	1.9e-10	60.42	Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein	[more]
AT2G37585.1	1.2e-09	47.69	Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein	[more]
AT4G27480.1	2.1e-09	41.98	Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein	[more]

BLAST of Carg01879 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q8S8P3\|GT14C_ARATH	2.2e-08	47.69	Beta-glucuronosyltransferase GlcAT14C OS=Arabidopsis thaliana OX=3702 GN=GLCAT14...	[more]
sp\|Q9FLD7\|GT14A_ARATH	2.5e-07	44.78	Beta-glucuronosyltransferase GlcAT14A OS=Arabidopsis thaliana OX=3702 GN=GLCAT14...	[more]
sp\|Q9LFQ0\|GT14B_ARATH	2.1e-06	51.02	Beta-glucuronosyltransferase GlcAT14B OS=Arabidopsis thaliana OX=3702 GN=GLCAT14...	[more]

BLAST of Carg01879 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BF77\|A0A1S3BF77_CUCME	2.5e-20	78.46	beta-glucuronosyltransferase GlcAT14A OS=Cucumis melo OX=3656 GN=LOC103489344 PE...	[more]
tr\|A0A0A0KRB3\|A0A0A0KRB3_CUCSA	4.2e-20	78.46	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G611740 PE=4 SV=1	[more]
tr\|M5XRI5\|M5XRI5_PRUPE	1.0e-18	64.10	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G322800 PE=4 SV=1	[more]
tr\|A0A2P6R396\|A0A2P6R396_ROSCH	1.0e-18	66.67	Putative glucuronosyltransferase OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr4g044...	[more]
tr\|A0A2I4GG81\|A0A2I4GG81_9ROSI	5.2e-18	63.75	beta-glucuronosyltransferase GlcAT14A-like OS=Juglans regia OX=51240 GN=LOC10900...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Cellular Component**
Term	Definition
GO:0016020	membrane

Vocabulary: **Molecular Function**
Term	Definition
GO:0008375	acetylglucosaminyltransferase activity

Vocabulary: **INTERPRO**
Term	Definition
IPR003406	Glyco_trans_14

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0016020	membrane
molecular_function	GO:0008375	acetylglucosaminyltransferase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg01879-RA	Carg01879-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003406	Glycosyl transferase, family 14	PFAM	PF02485	Branch	coord: 11..71 e-value: 4.7E-10 score: 39.3
None	No IPR available	PANTHER	PTHR19297	GLYCOSYLTRANSFERASE 14 FAMILY MEMBER	coord: 3..78
None	No IPR available	PANTHER	PTHR19297:SF70	SUBFAMILY NOT NAMED	coord: 3..78

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg01879	CmoCh04G015330	Cucurbita moschata (Rifu)	carcmoB1138
Carg01879	Cla97C05G103930	Watermelon (97103) v2	carwmbB0878
Carg01879	Bhi07G000580	Wax gourd	carwgoB0985

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg01879	Silver-seed gourd	carcarB629
Carg01879	Cucumber (Gy14) v2	carcgybB0831
Carg01879	Cucumber (Gy14) v1	carcgyB0968
Carg01879	Cucurbita maxima (Rimu)	carcmaB1161
Carg01879	Cucurbita maxima (Rimu)	carcmaB1167
Carg01879	Cucurbita maxima (Rimu)	carcmaB1170
Carg01879	Cucurbita moschata (Rifu)	carcmoB1130
Carg01879	Cucurbita moschata (Rifu)	carcmoB1135
Carg01879	Cucurbita pepo (Zucchini)	carcpeB1169
Carg01879	Cucurbita pepo (Zucchini)	carcpeB1175
Carg01879	Cucurbita pepo (Zucchini)	carcpeB1177
Carg01879	Wild cucumber (PI 183967)	carcpiB0877
Carg01879	Cucumber (Chinese Long) v2	carcuB0857
Carg01879	Cucumber (Chinese Long) v3	carcucB0881
Carg01879	Bottle gourd (USVL1VR-Ls)	carlsiB767
Carg01879	Bottle gourd (USVL1VR-Ls)	carlsiB769
Carg01879	Melon (DHL92) v3.5.1	carmeB0834
Carg01879	Melon (DHL92) v3.6.1	carmedB0846
Carg01879	Watermelon (Charleston Gray)	carwcgB0816
Carg01879	Watermelon (97103) v1	carwmB0842
Carg01879	Wax gourd	carwgoB0979