Carg01555 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg01555
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	keratinocyte-associated protein 2
Location	Cucurbita_argyrosperma_scaffold_004 : 1615267 .. 1618029 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GCAATAGAGCTGCTGCCCGAGGTATTTGCTTACCGCTCCTTCGATCTCTTTTGTAAGTGGGCAAATCCTGGGGAAAAAATTCAACTGGATCTAAAATTTTACCATTTTTCCGATTCGATTGAGTGGAATTTGTACTGAATTGCATCTTCCAATTGGATTGCCTCTGATATTTCGATTAGGTTATCCAAAACTAATCTATTGATTGTAGTGACGCTGAGATTTTTGTACCTTCTGTTGTTTCGGATCCGCATTTTTCTTTTCTTTTGCAATTGTTTTATTGCTGCTCATTTTGATCGCACATCTTGTTGTTTAGCTGGTTTCTGATTTCTGTTGCTGTCATTCCTCGTGGTTTGATGCTTGACTACTGGTTATGACGTTTTTGTGTTTGTGATTACTGAAGGTCATGGCGGGGTCTGGGAGTTCCATGCTTACCTCATTTCTTCTGTTCACTGTCATTCTTTCGCTTCAAGAGATGTATAGAGGAAAGTTAGCTTCATCGGAGTTATTTACCATACTTGGAGGATTCATCAGTTCTCTTCTATTTCTAGTGCTTCTAACTGTGAGTGCATACGCTTTTATCCTTTTACCAGCTAGACTAACGTGTGGATTTATTTCATCTTCATGTGTATTTCTGGATCCGGTGGCTTTTCCTGGAGAGGAGTTTACAGATATTTTATGGAATAGTTCGTGTTTTATCAGTATTTAATTCCGTCCTTTAGGCAGTTGAATCCACCTTCATAACATCTTTTGTCAATTACATGGACACTGAATAAGTAATATTGTTTAAATCAAAATGTGCAGTATTTCGTTGACTTCGATTTTGCATCGGTTACGAATTATAAGTTACAAAGATTTCTGCAATATTCTATTGTTTTCAATTCTGATCTCCTTGTTTTGTAAGAGATGATATTTCAAATTATAAACGATTATGACATTTTGGACCTGGCTTTGCTTGCTGTCAAACGTAATGGAATCAGTTGTATTTCATGGTTTTATGATAAGTTATGCATTGCATAACTCATGCATACAGAATTTTGTACTCATGACCGTGTTTTTTTGCTTCAATTACAGCGTGCAATTTATGAGCTTAATTTGTATTTAGTGCTTTTCAGCTTAAATTGCTGATTCAACATAATAATTTTCATTTTCATGATTTATTTATTGCAGTTTATAGGAAACTTCCAGGAATCATGTGGCATGCGAACTGGATGGGGAGCTGGTAAGTTTAGTTGCTTGTCCTTATCTGCACAATAATTTTTTTCTGCTTAATTAGTTTGTCAAAGACTAGCTTACAGTGTATGAGTAGCATCGACTTAGAGGTTGCGTATTTTGAATCATTGGGAGAGCTTAATGAGGAGCTCGAAATATGTCCCGTCAGTTGTGTAACAAGGTGTCCCATTGATGTCTCTGAGTATAGGTTTCATGGAAAGCACAGACTCTGTTGAAAATAGTCTTAATACTAATGCTGCAGATTGGAAACATTTGATGATTTATTTTATAGTTACCTGCAACAAGCGTATCTGTTCTTTATAAATGTTCATAATTGTTAGGATAAGCAAGCAATCATTAAAAAAAAAATTTGTATGGGTCTATATCTGTATTTTTGGCCTTTTCTTCTTCATATTATGCTGCATTGATTATGCTATTGAATGGATACTTGTCAATCATGTACTCCATTTGATTTGTGCATTATTAATGAAATGAAAATTTCATTGTTTAAAGTAGTACTTTCCTACTACTAGATACTCTTTTCCTTTATGTTCTTTCATAACAAATGAATTTTCATTGATGTTTGTTGAAAACCTTTAAGTGAGTTAATTCAGTAGATCATATATTATGATAAACAATAGCATAATAGTGTCCACATCTGCCAGTTTCCTTGAGATGAAGCAGAATCAACTAACCATTTACTTTTCTGTTGCAGTCATCGTAGCAGAAGCAGTTGCATTGATTGCTGCAAGCACTGTTCATAGAGTTTGCATCACAACATGGTATTCTGACTTAATCCATTTTCTTTACTGTGTTCATAGCTCTACTTCCCGTGGGAAGAAAGAAATGCAGAAGGAAACACTATAAAGAACAGAGAACTCATATCATAACGATTCAAAAGCGAAGATTATAAGATAGAAAACTGATCCTGTCATAATCTAATATCATATGTTCAAAATGGTAACTTCATTTCAAATATTTCAGAAGGGAAGGGAACAAATTCTAGACGTATGTTTATAGCCATTATATTAAATAGTAGAACAGCACGTTCCTTGTGATTGATTGCACCAAAACATTGAGTATCTTGAAACTCTAACTTCACATCTTTCTTGTTTTCTTCTGTTGCAGTTTCTTATTCTCCGCTGGACTGCTGTACGAGTTGAACAAGTTTTCGAGCGTGGCACTTTCTAAATCCGAATCTAGAGCGAAAAGGCACTGAGATGGAAACTAAGTTAGTTCTTCAGAGAGGAACAACGTTGTTTTTGAGATTTTCTTTTTACCCTTAGCTCCTGCAGGATCACTGCACCTTATGGTGCTGATTAGTTGTGTTTTTGTTTTCGTTTTAGGAGAGAGCCGGCTGTGGGAACAGTTACTACATTCATAACTATCATAATTTTAACAATTACTGCCTTCAAACATTTTCTTCTGTTGTTCAAGTAAAAAATGTATGGCATGTCTCCTGATTAGAGGTCCTATCGCCTGCTATTGAATCTAGAACACTTCATATTCATCTTGAAAACTTCACAGATTTGCAATAACAGTTCAAATTATAGG

mRNA sequence

GCAATAGAGCTGCTGCCCGAGGTATTTGCTTACCGCTCCTTCGATCTCTTTTGTAAGTGGGCAAATCCTGGGGAAAAAATTCAACTGGATCTAAAATTTTACCATTTTTCCGATTCGATTGAGTGGAATTTGTACTGAATTGCATCTTCCAATTGGATTGCCTCTGATATTTCGATTAGGTCATGGCGGGGTCTGGGAGTTCCATGCTTACCTCATTTCTTCTGTTCACTGTCATTCTTTCGCTTCAAGAGATGTATAGAGGAAAGTTAGCTTCATCGGAGTTATTTACCATACTTGGAGGATTCATCAGTTCTCTTCTATTTCTAGTGCTTCTAACTTTTATAGGAAACTTCCAGGAATCATGTGGCATGCGAACTGGATGGGGAGCTGTCATCGTAGCAGAAGCAGTTGCATTGATTGCTGCAAGCACTGTTCATAGAGTTTGCATCACAACATGTTTCTTATTCTCCGCTGGACTGCTGTACGAGTTGAACAAGTTTTCGAGCGTGGCACTTTCTAAATCCGAATCTAGAGCGAAAAGGCACTGAGATGGAAACTAAGTTAGTTCTTCAGAGAGGAACAACGTTGTTTTTGAGATTTTCTTTTTACCCTTAGCTCCTGCAGGATCACTGCACCTTATGGTGCTGATTAGTTGTGTTTTTGTTTTCGTTTTAGGAGAGAGCCGGCTGTGGGAACAGTTACTACATTCATAACTATCATAATTTTAACAATTACTGCCTTCAAACATTTTCTTCTGTTGTTCAAGTAAAAAATGTATGGCATGTCTCCTGATTAGAGGTCCTATCGCCTGCTATTGAATCTAGAACACTTCATATTCATCTTGAAAACTTCACAGATTTGCAATAACAGTTCAAATTATAGG

Coding sequence (CDS)

ATGGCGGGGTCTGGGAGTTCCATGCTTACCTCATTTCTTCTGTTCACTGTCATTCTTTCGCTTCAAGAGATGTATAGAGGAAAGTTAGCTTCATCGGAGTTATTTACCATACTTGGAGGATTCATCAGTTCTCTTCTATTTCTAGTGCTTCTAACTTTTATAGGAAACTTCCAGGAATCATGTGGCATGCGAACTGGATGGGGAGCTGTCATCGTAGCAGAAGCAGTTGCATTGATTGCTGCAAGCACTGTTCATAGAGTTTGCATCACAACATGTTTCTTATTCTCCGCTGGACTGCTGTACGAGTTGAACAAGTTTTCGAGCGTGGCACTTTCTAAATCCGAATCTAGAGCGAAAAGGCACTGA

Protein sequence

MAGSGSSMLTSFLLFTVILSLQEMYRGKLASSELFTILGGFISSLLFLVLLTFIGNFQESCGMRTGWGAVIVAEAVALIAASTVHRVCITTCFLFSAGLLYELNKFSSVALSKSESRAKRH

Homology

[Close]

BLAST of Carg01555 vs. NCBI nr
Match: XP_022939903.1 (protein KRTCAP2 homolog [Cucurbita moschata] >XP_022939904.1 protein KRTCAP2 homolog [Cucurbita moschata] >XP_022993937.1 protein KRTCAP2 homolog [Cucurbita maxima] >XP_022993938.1 protein KRTCAP2 homolog [Cucurbita maxima] >XP_022993939.1 protein KRTCAP2 homolog [Cucurbita maxima])

HSP 1 Score: 224.2 bits (570), Expect = 2.4e-55
Identity = 121/121 (100.00%), Postives = 121/121 (100.00%), Query Frame = 0


Query: 1   MAGSGSSMLTSFLLFTVILSLQEMYRGKLASSELFTILGGFISSLLFLVLLTFIGNFQES 60
           MAGSGSSMLTSFLLFTVILSLQEMYRGKLASSELFTILGGFISSLLFLVLLTFIGNFQES
Sbjct: 1   MAGSGSSMLTSFLLFTVILSLQEMYRGKLASSELFTILGGFISSLLFLVLLTFIGNFQES 60

Query: 61  CGMRTGWGAVIVAEAVALIAASTVHRVCITTCFLFSAGLLYELNKFSSVALSKSESRAKR 120
           CGMRTGWGAVIVAEAVALIAASTVHRVCITTCFLFSAGLLYELNKFSSVALSKSESRAKR
Sbjct: 61  CGMRTGWGAVIVAEAVALIAASTVHRVCITTCFLFSAGLLYELNKFSSVALSKSESRAKR 120

Query: 121 H 122
           H
Sbjct: 121 H 121

[Close]

BLAST of Carg01555 vs. NCBI nr
Match: XP_023551102.1 (protein KRTCAP2 homolog [Cucurbita pepo subsp. pepo] >XP_023551103.1 protein KRTCAP2 homolog [Cucurbita pepo subsp. pepo] >XP_023551104.1 protein KRTCAP2 homolog [Cucurbita pepo subsp. pepo])

HSP 1 Score: 223.8 bits (569), Expect = 3.2e-55
Identity = 120/121 (99.17%), Postives = 121/121 (100.00%), Query Frame = 0


Query: 1   MAGSGSSMLTSFLLFTVILSLQEMYRGKLASSELFTILGGFISSLLFLVLLTFIGNFQES 60
           MAGSGSSMLTSFLLFTVILSLQEMYRGKLASSELFTILGGF+SSLLFLVLLTFIGNFQES
Sbjct: 1   MAGSGSSMLTSFLLFTVILSLQEMYRGKLASSELFTILGGFVSSLLFLVLLTFIGNFQES 60

Query: 61  CGMRTGWGAVIVAEAVALIAASTVHRVCITTCFLFSAGLLYELNKFSSVALSKSESRAKR 120
           CGMRTGWGAVIVAEAVALIAASTVHRVCITTCFLFSAGLLYELNKFSSVALSKSESRAKR
Sbjct: 61  CGMRTGWGAVIVAEAVALIAASTVHRVCITTCFLFSAGLLYELNKFSSVALSKSESRAKR 120

Query: 121 H 122
           H
Sbjct: 121 H 121

[Close]

BLAST of Carg01555 vs. NCBI nr
Match: XP_022990979.1 (protein KRTCAP2 homolog [Cucurbita maxima] >XP_022990980.1 protein KRTCAP2 homolog [Cucurbita maxima] >XP_023552950.1 protein KRTCAP2 homolog isoform X1 [Cucurbita pepo subsp. pepo] >XP_023552956.1 protein KRTCAP2 homolog isoform X1 [Cucurbita pepo subsp. pepo] >XP_023552963.1 protein KRTCAP2 homolog isoform X2 [Cucurbita pepo subsp. pepo] >XP_023552970.1 protein KRTCAP2 homolog isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 213.0 bits (541), Expect = 5.6e-52
Identity = 115/121 (95.04%), Postives = 117/121 (96.69%), Query Frame = 0


Query: 1   MAGSGSSMLTSFLLFTVILSLQEMYRGKLASSELFTILGGFISSLLFLVLLTFIGNFQES 60
           MAGSGSSML SFLLFTVILSLQEMYRGKLASSELFTILGGFISSLLFLVLLTF+GNFQE+
Sbjct: 1   MAGSGSSMLYSFLLFTVILSLQEMYRGKLASSELFTILGGFISSLLFLVLLTFLGNFQET 60

Query: 61  CGMRTGWGAVIVAEAVALIAASTVHRVCITTCFLFSAGLLYELNKFSSVALSKSESRAKR 120
           CGMRTGWGAVIVAEAVALIAASTVHRVCITTCFLFSAGLLYELNK S  ALSKSESRAKR
Sbjct: 61  CGMRTGWGAVIVAEAVALIAASTVHRVCITTCFLFSAGLLYELNKLSGGALSKSESRAKR 120

Query: 121 H 122
           H
Sbjct: 121 H 121

[Close]

BLAST of Carg01555 vs. NCBI nr
Match: XP_022953105.1 (protein KRTCAP2 homolog [Cucurbita moschata] >XP_022953114.1 protein KRTCAP2 homolog [Cucurbita moschata])

HSP 1 Score: 211.1 bits (536), Expect = 2.1e-51
Identity = 114/121 (94.21%), Postives = 116/121 (95.87%), Query Frame = 0


Query: 1   MAGSGSSMLTSFLLFTVILSLQEMYRGKLASSELFTILGGFISSLLFLVLLTFIGNFQES 60
           MAGSGSSML SFLLFTVILSLQEMYRGKLASSELFTILGGFISSLLFLVLLTF+GNFQE+
Sbjct: 1   MAGSGSSMLYSFLLFTVILSLQEMYRGKLASSELFTILGGFISSLLFLVLLTFLGNFQET 60

Query: 61  CGMRTGWGAVIVAEAVALIAASTVHRVCITTCFLFSAGLLYELNKFSSVALSKSESRAKR 120
           CGMR GWGAVIVAEAVALIAASTVHRVCITTCFLFSAGLLYELNK S  ALSKSESRAKR
Sbjct: 61  CGMRAGWGAVIVAEAVALIAASTVHRVCITTCFLFSAGLLYELNKLSGGALSKSESRAKR 120

Query: 121 H 122
           H
Sbjct: 121 H 121

[Close]

BLAST of Carg01555 vs. NCBI nr
Match: XP_004149432.1 (PREDICTED: protein KRTCAP2 homolog [Cucumis sativus] >KGN47691.1 hypothetical protein Csa_6G381810 [Cucumis sativus])

HSP 1 Score: 208.8 bits (530), Expect = 1.1e-50
Identity = 111/121 (91.74%), Postives = 116/121 (95.87%), Query Frame = 0


Query: 1   MAGSGSSMLTSFLLFTVILSLQEMYRGKLASSELFTILGGFISSLLFLVLLTFIGNFQES 60
           MAGSGSSML SFLLF VILSLQEMYRGKLASSELFTILGGF+SSLLFLVLLTFIGNFQE+
Sbjct: 1   MAGSGSSMLYSFLLFIVILSLQEMYRGKLASSELFTILGGFVSSLLFLVLLTFIGNFQET 60

Query: 61  CGMRTGWGAVIVAEAVALIAASTVHRVCITTCFLFSAGLLYELNKFSSVALSKSESRAKR 120
           CGMRTGWGAVI+AEAVALIAASTVHRVCITTCFLFSAGLLYEL+K S +ALSKSESR KR
Sbjct: 61  CGMRTGWGAVIIAEAVALIAASTVHRVCITTCFLFSAGLLYELSKLSGMALSKSESRVKR 120

Query: 121 H 122
           H
Sbjct: 121 H 121

[Close]

BLAST of Carg01555 vs. TAIR10
Match: AT1G77350.1 (unknown protein)

HSP 1 Score: 177.2 bits (448), Expect = 6.2e-45
Identity = 95/122 (77.87%), Postives = 109/122 (89.34%), Query Frame = 0


Query: 1   MAGS-GSSMLTSFLLFTVILSLQEMYRGKLASSELFTILGGFISSLLFLVLLTFIGNFQE 60
           MAG+ G+SML S ++FTVILSLQE+YRGKLASSELFTILGGF SSLLFL  LTFIGNFQE
Sbjct: 1   MAGAVGTSMLGSLIVFTVILSLQEIYRGKLASSELFTILGGFTSSLLFLFSLTFIGNFQE 60

Query: 61  SCGMRTGWGAVIVAEAVALIAASTVHRVCITTCFLFSAGLLYELNKFSSVALSKSESRAK 120
           S G+++GWGAVI+AE +ALIAA TVHRVCITTCFLFSAGLLYE+NK S   LSK+ES++K
Sbjct: 61  SSGIKSGWGAVILAEIIALIAAGTVHRVCITTCFLFSAGLLYEVNKISGYMLSKTESKSK 120

Query: 121 RH 122
           RH
Sbjct: 121 RH 122

[Close]

BLAST of Carg01555 vs. Swiss-Prot
Match: sp|Q5Q995|KTAP2_IXOSC (Protein KRTCAP2 homolog OS=Ixodes scapularis OX=6945 PE=2 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 1.9e-11
Identity = 40/108 (37.04%), Postives = 67/108 (62.04%), Query Frame = 0


Query: 4   SGSSMLTSFLLFTVILSLQEMYRGKLASSELFTILGGFISSLLFLVLLTFIGNFQESCGM 63
           SG+S + +  LF ++ +  ++Y+ +L SS+   I+GGF+ S+LF+++LT I NF+     
Sbjct: 5   SGTSGMLATCLFMLLFATMQIYKSQLTSSQPMAIVGGFLGSVLFILILTAISNFETHFFG 64

Query: 64  RTGW----GAVIVAEAVALIAASTVHRVCITTCFLFSAGLLYELNKFS 108
           R         V++A  +A+ A+  VHRVCITTC +FS   LY +++ S
Sbjct: 65  RNFQTKLIPEVVIALVIAMAASGMVHRVCITTCLIFSIVALYYVSRIS 112

[Close]

BLAST of Carg01555 vs. Swiss-Prot
Match: sp|A6QQ59|KTAP2_BOVIN (Keratinocyte-associated protein 2 OS=Bos taurus OX=9913 GN=KRTCAP2 PE=2 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 1.2e-10
Identity = 46/113 (40.71%), Postives = 66/113 (58.41%), Query Frame = 0


Query: 1   MAGSGSSMLTSFLLFTVILSLQEMYRGKLASSELFTILGGFISSLLFLVLLTFIGNFQES 60
           + G+G+S+  S LL  ++ +  +MY  +LAS+E  TI GG + S LF+  LT   N  E+
Sbjct: 2   VVGTGTSLALSSLLSLLLFAGMQMYSRQLASTEWLTIQGGLLGSGLFVFSLTAFNNL-EN 61

Query: 61  CGMRTGWGAVIVAE-----AVALIAASTVHRVCITTCFLFSAGLLYELNKFSS 109
                G+ A I  E      +AL A+  +HRVC+TTCF+FS   LY +NK SS
Sbjct: 62  LVFGKGFQAKIFPEILLCLLLALFASGLIHRVCVTTCFIFSMVGLYYINKISS 113

[Close]

BLAST of Carg01555 vs. Swiss-Prot
Match: sp|P86229|KTAP2_CANLF (Keratinocyte-associated protein 2 OS=Canis lupus familiaris OX=9615 GN=KRTCAP2 PE=1 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 1.2e-10
Identity = 46/111 (41.44%), Postives = 65/111 (58.56%), Query Frame = 0


Query: 3   GSGSSMLTSFLLFTVILSLQEMYRGKLASSELFTILGGFISSLLFLVLLTFIGNFQESCG 62
           G+G+S+  S LL  ++ +  +MY  +LAS+E  TI GG + S LF+  LT   N  E+  
Sbjct: 4   GTGTSLALSSLLSLLLFAGMQMYSRQLASTEWLTIQGGLLGSGLFVFSLTAFNNL-ENLV 63

Query: 63  MRTGWGAVIVAE-----AVALIAASTVHRVCITTCFLFSAGLLYELNKFSS 109
              G+ A I  E      +AL A+  +HRVC+TTCF+FS   LY +NK SS
Sbjct: 64  FGKGFQAKIFPEILLCLLLALFASGLIHRVCVTTCFIFSMVGLYYINKISS 113

[Close]

BLAST of Carg01555 vs. Swiss-Prot
Match: sp|Q8N6L1|KTAP2_HUMAN (Keratinocyte-associated protein 2 OS=Homo sapiens OX=9606 GN=KRTCAP2 PE=1 SV=2)

HSP 1 Score: 67.4 bits (163), Expect = 1.2e-10
Identity = 46/113 (40.71%), Postives = 66/113 (58.41%), Query Frame = 0


Query: 1   MAGSGSSMLTSFLLFTVILSLQEMYRGKLASSELFTILGGFISSLLFLVLLTFIGNFQES 60
           + G+G+S+  S LL  ++ +  +MY  +LAS+E  TI GG + S LF+  LT   N  E+
Sbjct: 2   VVGTGTSLALSSLLSLLLFAGMQMYSRQLASTEWLTIQGGLLGSGLFVFSLTAFNNL-EN 61

Query: 61  CGMRTGWGAVIVAE-----AVALIAASTVHRVCITTCFLFSAGLLYELNKFSS 109
                G+ A I  E      +AL A+  +HRVC+TTCF+FS   LY +NK SS
Sbjct: 62  LVFGKGFQAKIFPEILLCLLLALFASGLIHRVCVTTCFIFSMVGLYYINKISS 113

[Close]

BLAST of Carg01555 vs. Swiss-Prot
Match: sp|Q5RL79|KTAP2_MOUSE (Keratinocyte-associated protein 2 OS=Mus musculus OX=10090 GN=Krtcap2 PE=1 SV=2)

HSP 1 Score: 65.9 bits (159), Expect = 3.6e-10
Identity = 45/113 (39.82%), Postives = 66/113 (58.41%), Query Frame = 0


Query: 1   MAGSGSSMLTSFLLFTVILSLQEMYRGKLASSELFTILGGFISSLLFLVLLTFIGNFQES 60
           + G+G+S+  S LL  ++ +  ++Y  +LAS+E  TI GG + S LF+  LT   N  E+
Sbjct: 2   VVGTGTSLALSSLLSLLLFAGMQIYSRQLASTEWLTIQGGLLGSGLFVFSLTAFNNL-EN 61

Query: 61  CGMRTGWGAVIVAE-----AVALIAASTVHRVCITTCFLFSAGLLYELNKFSS 109
                G+ A I  E      +AL A+  +HRVC+TTCF+FS   LY +NK SS
Sbjct: 62  LVFGKGFQAKIFPEILLCLLLALFASGLIHRVCVTTCFIFSMVGLYYINKISS 113

[Close]

BLAST of Carg01555 vs. TrEMBL
Match: tr|A0A0A0KIU0|A0A0A0KIU0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G381810 PE=4 SV=1)

HSP 1 Score: 208.8 bits (530), Expect = 7.0e-51
Identity = 111/121 (91.74%), Postives = 116/121 (95.87%), Query Frame = 0


Query: 1   MAGSGSSMLTSFLLFTVILSLQEMYRGKLASSELFTILGGFISSLLFLVLLTFIGNFQES 60
           MAGSGSSML SFLLF VILSLQEMYRGKLASSELFTILGGF+SSLLFLVLLTFIGNFQE+
Sbjct: 1   MAGSGSSMLYSFLLFIVILSLQEMYRGKLASSELFTILGGFVSSLLFLVLLTFIGNFQET 60

Query: 61  CGMRTGWGAVIVAEAVALIAASTVHRVCITTCFLFSAGLLYELNKFSSVALSKSESRAKR 120
           CGMRTGWGAVI+AEAVALIAASTVHRVCITTCFLFSAGLLYEL+K S +ALSKSESR KR
Sbjct: 61  CGMRTGWGAVIIAEAVALIAASTVHRVCITTCFLFSAGLLYELSKLSGMALSKSESRVKR 120

Query: 121 H 122
           H
Sbjct: 121 H 121

[Close]

BLAST of Carg01555 vs. TrEMBL
Match: tr|A0A061FHK5|A0A061FHK5_THECC (Keratinocyte-associated protein 2 isoform 1 OS=Theobroma cacao OX=3641 GN=TCM_035199 PE=4 SV=1)

HSP 1 Score: 206.5 bits (524), Expect = 3.5e-50
Identity = 110/121 (90.91%), Postives = 114/121 (94.21%), Query Frame = 0


Query: 1   MAGSGSSMLTSFLLFTVILSLQEMYRGKLASSELFTILGGFISSLLFLVLLTFIGNFQES 60
           MAGSGSSML SFLLFTVILSLQEMYRGKLASSELFTILGGFISSLLFLV LTFIGNFQE+
Sbjct: 1   MAGSGSSMLYSFLLFTVILSLQEMYRGKLASSELFTILGGFISSLLFLVSLTFIGNFQET 60

Query: 61  CGMRTGWGAVIVAEAVALIAASTVHRVCITTCFLFSAGLLYELNKFSSVALSKSESRAKR 120
           CGMRTGWGAVI+AE VALIAASTVHRVCITTCFLFSAGLLYE+NK S V LSKSES+ KR
Sbjct: 61  CGMRTGWGAVILAEVVALIAASTVHRVCITTCFLFSAGLLYEINKISGVTLSKSESKTKR 120

Query: 121 H 122
           H
Sbjct: 121 H 121

[Close]

BLAST of Carg01555 vs. TrEMBL
Match: tr|A0A2P5F195|A0A2P5F195_9ROSA (KRTCAP2-like OS=Trema orientalis OX=63057 GN=TorRG33x02_125840 PE=4 SV=1)

HSP 1 Score: 204.1 bits (518), Expect = 1.7e-49
Identity = 106/121 (87.60%), Postives = 114/121 (94.21%), Query Frame = 0


Query: 1   MAGSGSSMLTSFLLFTVILSLQEMYRGKLASSELFTILGGFISSLLFLVLLTFIGNFQES 60
           MAG+GSSML SFLLFTVILSLQEMYRGKLAS+E FTILGGFISSLLFLV LTFIGNFQES
Sbjct: 1   MAGTGSSMLYSFLLFTVILSLQEMYRGKLASTEFFTILGGFISSLLFLVSLTFIGNFQES 60

Query: 61  CGMRTGWGAVIVAEAVALIAASTVHRVCITTCFLFSAGLLYELNKFSSVALSKSESRAKR 120
           CGM+TGWGAV++AEAVALIAASTVHRVCITTCFLFSAGLLYE+NK S + LSKSES+ KR
Sbjct: 61  CGMKTGWGAVVIAEAVALIAASTVHRVCITTCFLFSAGLLYEINKLSGITLSKSESKTKR 120

Query: 121 H 122
           H
Sbjct: 121 H 121

[Close]

BLAST of Carg01555 vs. TrEMBL
Match: tr|A0A1S4E6K7|A0A1S4E6K7_CUCME (protein KRTCAP2 homolog OS=Cucumis melo OX=3656 GN=LOC103504096 PE=4 SV=1)

HSP 1 Score: 203.8 bits (517), Expect = 2.3e-49
Identity = 110/121 (90.91%), Postives = 113/121 (93.39%), Query Frame = 0


Query: 1   MAGSGSSMLTSFLLFTVILSLQEMYRGKLASSELFTILGGFISSLLFLVLLTFIGNFQES 60
           MAGSGSSML SFLLF VILSLQEMYRGKLASSELFTILGGF+SSLLFLVLLTFIGNFQE+
Sbjct: 1   MAGSGSSMLYSFLLFIVILSLQEMYRGKLASSELFTILGGFVSSLLFLVLLTFIGNFQET 60

Query: 61  CGMRTGWGAVIVAEAVALIAASTVHRVCITTCFLFSAGLLYELNKFSSVALSKSESRAKR 120
            G+RTGWGAVIVAEAVALIAASTVHRVCITTCFLFSAGLLYELNK S   LSKSESR KR
Sbjct: 61  SGVRTGWGAVIVAEAVALIAASTVHRVCITTCFLFSAGLLYELNKLSGATLSKSESRVKR 120

Query: 121 H 122
           H
Sbjct: 121 H 121

[Close]

BLAST of Carg01555 vs. TrEMBL
Match: tr|A0A2P5CGI8|A0A2P5CGI8_PARAD (KRTCAP2-like OS=Parasponia andersonii OX=3476 GN=PanWU01x14_154850 PE=4 SV=1)

HSP 1 Score: 203.8 bits (517), Expect = 2.3e-49
Identity = 105/121 (86.78%), Postives = 114/121 (94.21%), Query Frame = 0


Query: 1   MAGSGSSMLTSFLLFTVILSLQEMYRGKLASSELFTILGGFISSLLFLVLLTFIGNFQES 60
           MAG+GSSML SFLLFTVILSLQEMYRGKLAS+E FTILGGF+SSLLFLV LTFIGNFQES
Sbjct: 1   MAGTGSSMLYSFLLFTVILSLQEMYRGKLASTEFFTILGGFVSSLLFLVSLTFIGNFQES 60

Query: 61  CGMRTGWGAVIVAEAVALIAASTVHRVCITTCFLFSAGLLYELNKFSSVALSKSESRAKR 120
           CGM+TGWGAV++AEAVALIAASTVHRVCITTCFLFSAGLLYE+NK S + LSKSES+ KR
Sbjct: 61  CGMKTGWGAVVIAEAVALIAASTVHRVCITTCFLFSAGLLYEINKLSGITLSKSESKTKR 120

Query: 121 H 122
           H
Sbjct: 121 H 121

The following BLAST results are available for this feature:

BLAST of Carg01555 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022939903.1	2.4e-55	100.00	protein KRTCAP2 homolog [Cucurbita moschata] >XP_022939904.1 protein KRTCAP2 hom...	[more]
XP_023551102.1	3.2e-55	99.17	protein KRTCAP2 homolog [Cucurbita pepo subsp. pepo] >XP_023551103.1 protein KRT...	[more]
XP_022990979.1	5.6e-52	95.04	protein KRTCAP2 homolog [Cucurbita maxima] >XP_022990980.1 protein KRTCAP2 homol...	[more]
XP_022953105.1	2.1e-51	94.21	protein KRTCAP2 homolog [Cucurbita moschata] >XP_022953114.1 protein KRTCAP2 hom...	[more]
XP_004149432.1	1.1e-50	91.74	PREDICTED: protein KRTCAP2 homolog [Cucumis sativus] >KGN47691.1 hypothetical pr...	[more]

BLAST of Carg01555 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G77350.1	6.2e-45	77.87	unknown protein	[more]

BLAST of Carg01555 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q5Q995\|KTAP2_IXOSC	1.9e-11	37.04	Protein KRTCAP2 homolog OS=Ixodes scapularis OX=6945 PE=2 SV=1	[more]
sp\|A6QQ59\|KTAP2_BOVIN	1.2e-10	40.71	Keratinocyte-associated protein 2 OS=Bos taurus OX=9913 GN=KRTCAP2 PE=2 SV=1	[more]
sp\|P86229\|KTAP2_CANLF	1.2e-10	41.44	Keratinocyte-associated protein 2 OS=Canis lupus familiaris OX=9615 GN=KRTCAP2 P...	[more]
sp\|Q8N6L1\|KTAP2_HUMAN	1.2e-10	40.71	Keratinocyte-associated protein 2 OS=Homo sapiens OX=9606 GN=KRTCAP2 PE=1 SV=2	[more]
sp\|Q5RL79\|KTAP2_MOUSE	3.6e-10	39.82	Keratinocyte-associated protein 2 OS=Mus musculus OX=10090 GN=Krtcap2 PE=1 SV=2	[more]

BLAST of Carg01555 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KIU0\|A0A0A0KIU0_CUCSA	7.0e-51	91.74	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G381810 PE=4 SV=1	[more]
tr\|A0A061FHK5\|A0A061FHK5_THECC	3.5e-50	90.91	Keratinocyte-associated protein 2 isoform 1 OS=Theobroma cacao OX=3641 GN=TCM_03...	[more]
tr\|A0A2P5F195\|A0A2P5F195_9ROSA	1.7e-49	87.60	KRTCAP2-like OS=Trema orientalis OX=63057 GN=TorRG33x02_125840 PE=4 SV=1	[more]
tr\|A0A1S4E6K7\|A0A1S4E6K7_CUCME	2.3e-49	90.91	protein KRTCAP2 homolog OS=Cucumis melo OX=3656 GN=LOC103504096 PE=4 SV=1	[more]
tr\|A0A2P5CGI8\|A0A2P5CGI8_PARAD	2.3e-49	86.78	KRTCAP2-like OS=Parasponia andersonii OX=3476 GN=PanWU01x14_154850 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR018614	KRTCAP2

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg01555-RA	Carg01555-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR018614	Keratinocyte-associated protein 2	PFAM	PF09775	Keratin_assoc	coord: 4..117 e-value: 1.8E-38 score: 131.0
IPR018614	Keratinocyte-associated protein 2	PANTHER	PTHR32001	FAMILY NOT NAMED	coord: 2..116

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg01555	Cla013909	Watermelon (97103) v1	carwmB0824
Carg01555	Csa6G381810	Cucumber (Chinese Long) v2	carcuB0851
Carg01555	ClCG08G005990	Watermelon (Charleston Gray)	carwcgB0803
Carg01555	CSPI06G20070	Wild cucumber (PI 183967)	carcpiB0871
Carg01555	Cucsa.328160	Cucumber (Gy14) v1	carcgyB0954
Carg01555	CmaCh04G023880	Cucurbita maxima (Rimu)	carcmaB1150
Carg01555	CmaCh15G006530	Cucurbita maxima (Rimu)	carcmaB1148
Carg01555	CmoCh04G025040	Cucurbita moschata (Rifu)	carcmoB1121
Carg01555	CmoCh15G006620	Cucurbita moschata (Rifu)	carcmoB1118
Carg01555	Cp4.1LG01g20740	Cucurbita pepo (Zucchini)	carcpeB1158
Carg01555	Cp4.1LG13g04460	Cucurbita pepo (Zucchini)	carcpeB1157
Carg01555	CsGy6G019540	Cucumber (Gy14) v2	carcgybB0825
Carg01555	CsaV3_6G034090	Cucumber (Chinese Long) v3	carcucB0875
Carg01555	Cla97C08G148760	Watermelon (97103) v2	carwmbB0862

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg01555	Carg15744	Silver-seed gourd	carcarB076

The following block(s) are covering this gene:


Gene	Organism	Block
Carg01555	Wax gourd	carwgoB0967
Carg01555	Bottle gourd (USVL1VR-Ls)	carlsiB758
Carg01555	Melon (DHL92) v3.5.1	carmeB0824
Carg01555	Melon (DHL92) v3.6.1	carmedB0835