CSPI06G20070 (gene) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI06G20070
Type	gene
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	Keratinocyte-associated protein 2 isoform 2
Location	Chr6 : 18057214 .. 18060139 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ACCGTTCGGTTGCTTAAAACTTTGTATTAGTAGCAGGCAAGCAGGTTAGTAAGGAGACCGGCTTCGAACCGTCGACTCGTCGTCAGAGAAGAAGAATCGAAAGCTGCTGCCGGAGGTATTTGCTTAACGTTTCTCCGATCCCTTTTGTTGGCGGCCAAATCGTAGGGCAAAAATATTCAACGGGATCTAAGTTATACCATTTTTTTCTCACTCAATTGGTCGCAATTTGAACTTAAACTGCATCTCCCTTTGGTTTCTGTTTCAGTTTTTTCGATCAGGTTATCGTAGACTAATCTATTGTTTGTAGTTATGCTGAGATGCACGTTCTCTCTGTTGTTTCGGATCCGCATTTCTCTTTTCCTTTGTAATCGTTTTACATTATGATGCATGGAGTTGGTTGTATATTGTTGCTTATTTTGATCGCCGATCTAGTTGTTTGCCTTAGTTTCTGGTTTCTGTTGCTGTCATTTCTCCTAGTTTGATAGTTTGCTATTGGTTTTGACGTTTTTGTGCATTTTGATTGCTGAAGGCCATGGCGGGGTCTGGGAGTTCCATGCTTTACTCATTTCTTCTATTCATTGTCATTCTTTCGCTTCAAGAGATGTATAGAGGAAAATTGGCTTCATCGGAGTTGTTTACCATACTTGGAGGATTTGTCAGTTCTCTTCTGTTTCTGGTGCTTCTAACAGTGAGTTCATACGCTTTTTATCCTTTTACCGTCTTCACAAACGCGTCGATGCTTTTTCTCTTCCGGGGTATTTCTGGATGGGGATTTTACAGGAATTTTATGGGACAGTTAACGTTTTATTAGTATATGGTCCCGTCCTTTAGACATCCACCTTTGTAACATCTTGTGTCAATTACATGGAAATTGAATAACTGATACTATTTAAATACAAATATGCAGTATTTCGTTGACTTCCATTCCATATTCTGTAGTTTGCATCGATTGGAAATGGTTATGACATTTTGGACTTGGTTTTGCTGTAAAACGTAATAGAACCACTTGTATTTCATGGATTTAAGCAAAGCTATGAATTGCATCAGCAACATGAAAAGTTGCATACATACAGAATTTTGAACTTGGGACTGTGTCCTATTGCTTCAATTACACGTGCAATTTAGAGCTCAATCTATATTTAGTCTATGCTTTTCACTTCAGCTAAATTGTTGATTCAGCACGGTGATTTTCACTCTCTTGGTTTATTTGCAGTTTATAGGAAACTTCCAGGAAACATGTGGCATGCGAACTGGATGGGGAGCTGGTAAGTTTAATAGCTTGTGTTCTTGTCTGCACAATTTTTTTTTATCTGCTCAATAAGTTTGTCTAATACTAGTCCTATGATGTGGCCTGTTGGCTAAAGCTTGCGGTCTCTGAGTACACCCACTCTAAGGTTGTGTATTTAAAACTTTGGGTGAGCTTAACAAGGGAAAAGCTTACTCTTGATATCTCTTGAGTCTCGGCTTTGTTGCTAGCGCTGACTATTTTGAAAATAGTATCTAATACTAATGCTGCAGATTGGTAATATTTGATGATTTCTTTTATAGACCTGCAACAATCAATCTGTTTCTGTAAATTGTTCATTTGTTAAGTCACCAGATGATATTCTGGGTTAGGTTTACACTCATGGCATCTACCATTTATTTTCTTGAGTAAATTGTTAAAACAAAATTTTCTATGGATCTACATCTATATTTTTGGCCTTCTTCATATTGTGTTGCTTTGTTTATTCTGTTGATTGAATACCTGTTAGTCATGCACTTGATCTGTGCATTCTTTATGAGTTTGAAATTTCATTATTTAAACTAATTCTTGATTTTGTACTAGATCTCTACACTAGGTGAACATCAAAAGATAGTATGCAAGTGGTTGTAATATATTTCAATGGAATTCTTTAGTTTCATTAGATTTAACAGTATTGCTTCTAAAATTTCAATTGTGAATTTGGAACTGGACATTGATTAACGATGAGCTTGAAAGGTTGGAGATTTTGTGGCTCCTGGTGCTCTTTTCTTTCATGTTCTTTCATAACAAAAGAATTTTCATTGATGTTTGATGAAAACCTTAGTTAATGCAAGTTATTCAACTAACCCCCACATCTGCCAAATTCCTTGTAGATGAATCAAAATCAACTCATGTACTTTTCTTTTGCAGTCATCATAGCAGAAGCAGTTGCATTGATTGCTGCAAGCACTGTTCATAGAGTTTGCATCACAACATGGTATTTTCCGACTTTTATTTCTCTCACAGATTTCGTACCTACTTCCAATGGAAAGAAAGAAATGTAGAAGGAACCAGTATAGTCTATAAAACCTAAACAACGTATATCATAAAGATTCAAGAGTTTAGATTATAAGAATGAAAACTTATCTCGTCATAATCTAATATGCAACATAGGAATTGAAATGGTAATCTCACTTCAAATACTTCAAAAGGGAAGAGAACAAACTCTAGACGTTTATTCTCACATAAAATATTGAGATCAATTATATTAAAAGTTTTGAGTATCTTGTTAGTCTATCTTCACAGCTTTATGATCTTATTCTCCTGCAGTTTCTTGTTCTCCGCTGGACTGCTGTATGAGTTGAGCAAGCTTTCGGGTATGGCACTATCTAAATCTGAATCTAGAGTCAAAAGACACTGAGATGGAAACTTAGCTCGTCAGACCGAAACTACGTTGTTTTTTGAGATTTTCCTTTTACTCCTACCTTCTGCAGGATCACTAGCTATGATTAGTTGTGTTTTTTGTTTTGTTTTGTTTTCGTTTTTGGAGAGGAGCGGCTGTGGGAACAATTGTTACATTCATAGCTATTATAACATTAACTAACAGTGGTGTTAGCTATCAATGAATATTTCTGAAAATATTATAAAAACAAAAGAGAGTATTTAGATTAATAAATACGTTTTGTTATTGTTGATTCCTTG

mRNA sequence

ATGGCGGGGTCTGGGAGTTCCATGCTTTACTCATTTCTTCTATTCATTGTCATTCTTTCGCTTCAAGAGATGTATAGAGGAAAATTGGCTTCATCGGAGTTGTTTACCATACTTGGAGGATTTGTCAGTTCTCTTCTGTTTCTGGTGCTTCTAACATTTATAGGAAACTTCCAGGAAACATGTGGCATGCGAACTGGATGGGGAGCTGTCATCATAGCAGAAGCAGTTGCATTGATTGCTGCAAGCACTGTTCATAGAGTTTGCATCACAACATGTTTCTTGTTCTCCGCTGGACTGCTGTATGAGTTGAGCAAGCTTTCGGGTATGGCACTATCTAAATCTGAATCTAGAGTCAAAAGACACTGA

Coding sequence (CDS)

ATGGCGGGGTCTGGGAGTTCCATGCTTTACTCATTTCTTCTATTCATTGTCATTCTTTCGCTTCAAGAGATGTATAGAGGAAAATTGGCTTCATCGGAGTTGTTTACCATACTTGGAGGATTTGTCAGTTCTCTTCTGTTTCTGGTGCTTCTAACATTTATAGGAAACTTCCAGGAAACATGTGGCATGCGAACTGGATGGGGAGCTGTCATCATAGCAGAAGCAGTTGCATTGATTGCTGCAAGCACTGTTCATAGAGTTTGCATCACAACATGTTTCTTGTTCTCCGCTGGACTGCTGTATGAGTTGAGCAAGCTTTCGGGTATGGCACTATCTAAATCTGAATCTAGAGTCAAAAGACACTGA

Homology

[Close]

BLAST of CSPI06G20070 vs. Swiss-Prot
Match: KTAP2_IXOSC (Protein KRTCAP2 homolog OS=Ixodes scapularis PE=2 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 3.9e-12
Identity = 42/108 (38.89%), Postives = 69/108 (63.89%), Query Frame = 1


Query: 4   SGSSMLYSFLLFIVILSLQEMYRGKLASSELFTILGGFVSSLLFLVLLTFIGNFQETCGM 63
           SG+S + +  LF+++ +  ++Y+ +L SS+   I+GGF+ S+LF+++LT I NF+     
Sbjct: 5   SGTSGMLATCLFMLLFATMQIYKSQLTSSQPMAIVGGFLGSVLFILILTAISNFETHFFG 64

Query: 64  RTGW----GAVIIAEAVALIAASTVHRVCITTCFLFSAGLLYELSKLS 108
           R         V+IA  +A+ A+  VHRVCITTC +FS   LY +S++S
Sbjct: 65  RNFQTKLIPEVVIALVIAMAASGMVHRVCITTCLIFSIVALYYVSRIS 112

[Close]

BLAST of CSPI06G20070 vs. Swiss-Prot
Match: KTAP2_BOVIN (Keratinocyte-associated protein 2 OS=Bos taurus GN=KRTCAP2 PE=2 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 3.6e-10
Identity = 44/112 (39.29%), Postives = 66/112 (58.93%), Query Frame = 1


Query: 1   MAGSGSSMLYSFLLFIVILSLQEMYRGKLASSELFTILGGFVSSLLFLVLLTFIGNFQET 60
           + G+G+S+  S LL +++ +  +MY  +LAS+E  TI GG + S LF+  LT   N  E 
Sbjct: 2   VVGTGTSLALSSLLSLLLFAGMQMYSRQLASTEWLTIQGGLLGSGLFVFSLTAFNNL-EN 61

Query: 61  CGMRTGWGAVIIAE-----AVALIAASTVHRVCITTCFLFSAGLLYELSKLS 108
                G+ A I  E      +AL A+  +HRVC+TTCF+FS   LY ++K+S
Sbjct: 62  LVFGKGFQAKIFPEILLCLLLALFASGLIHRVCVTTCFIFSMVGLYYINKIS 112

[Close]

BLAST of CSPI06G20070 vs. Swiss-Prot
Match: KTAP2_HUMAN (Keratinocyte-associated protein 2 OS=Homo sapiens GN=KRTCAP2 PE=1 SV=2)

HSP 1 Score: 65.9 bits (159), Expect = 3.6e-10
Identity = 44/112 (39.29%), Postives = 66/112 (58.93%), Query Frame = 1


Query: 1   MAGSGSSMLYSFLLFIVILSLQEMYRGKLASSELFTILGGFVSSLLFLVLLTFIGNFQET 60
           + G+G+S+  S LL +++ +  +MY  +LAS+E  TI GG + S LF+  LT   N  E 
Sbjct: 2   VVGTGTSLALSSLLSLLLFAGMQMYSRQLASTEWLTIQGGLLGSGLFVFSLTAFNNL-EN 61

Query: 61  CGMRTGWGAVIIAE-----AVALIAASTVHRVCITTCFLFSAGLLYELSKLS 108
                G+ A I  E      +AL A+  +HRVC+TTCF+FS   LY ++K+S
Sbjct: 62  LVFGKGFQAKIFPEILLCLLLALFASGLIHRVCVTTCFIFSMVGLYYINKIS 112

[Close]

BLAST of CSPI06G20070 vs. Swiss-Prot
Match: KTAP2_CANLF (Keratinocyte-associated protein 2 OS=Canis lupus familiaris GN=KRTCAP2 PE=1 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 4.7e-10
Identity = 44/110 (40.00%), Postives = 65/110 (59.09%), Query Frame = 1


Query: 3   GSGSSMLYSFLLFIVILSLQEMYRGKLASSELFTILGGFVSSLLFLVLLTFIGNFQETCG 62
           G+G+S+  S LL +++ +  +MY  +LAS+E  TI GG + S LF+  LT   N  E   
Sbjct: 4   GTGTSLALSSLLSLLLFAGMQMYSRQLASTEWLTIQGGLLGSGLFVFSLTAFNNL-ENLV 63

Query: 63  MRTGWGAVIIAEAV-----ALIAASTVHRVCITTCFLFSAGLLYELSKLS 108
              G+ A I  E +     AL A+  +HRVC+TTCF+FS   LY ++K+S
Sbjct: 64  FGKGFQAKIFPEILLCLLLALFASGLIHRVCVTTCFIFSMVGLYYINKIS 112

[Close]

BLAST of CSPI06G20070 vs. Swiss-Prot
Match: KTAP2_MOUSE (Keratinocyte-associated protein 2 OS=Mus musculus GN=Krtcap2 PE=1 SV=2)

HSP 1 Score: 64.3 bits (155), Expect = 1.0e-09
Identity = 43/112 (38.39%), Postives = 66/112 (58.93%), Query Frame = 1


Query: 1   MAGSGSSMLYSFLLFIVILSLQEMYRGKLASSELFTILGGFVSSLLFLVLLTFIGNFQET 60
           + G+G+S+  S LL +++ +  ++Y  +LAS+E  TI GG + S LF+  LT   N  E 
Sbjct: 2   VVGTGTSLALSSLLSLLLFAGMQIYSRQLASTEWLTIQGGLLGSGLFVFSLTAFNNL-EN 61

Query: 61  CGMRTGWGAVIIAEAV-----ALIAASTVHRVCITTCFLFSAGLLYELSKLS 108
                G+ A I  E +     AL A+  +HRVC+TTCF+FS   LY ++K+S
Sbjct: 62  LVFGKGFQAKIFPEILLCLLLALFASGLIHRVCVTTCFIFSMVGLYYINKIS 112

[Close]

BLAST of CSPI06G20070 vs. TrEMBL
Match: A0A0A0KIU0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G381810 PE=4 SV=1)

HSP 1 Score: 225.7 bits (574), Expect = 3.0e-56
Identity = 121/121 (100.00%), Postives = 121/121 (100.00%), Query Frame = 1


Query: 1   MAGSGSSMLYSFLLFIVILSLQEMYRGKLASSELFTILGGFVSSLLFLVLLTFIGNFQET 60
           MAGSGSSMLYSFLLFIVILSLQEMYRGKLASSELFTILGGFVSSLLFLVLLTFIGNFQET
Sbjct: 1   MAGSGSSMLYSFLLFIVILSLQEMYRGKLASSELFTILGGFVSSLLFLVLLTFIGNFQET 60

Query: 61  CGMRTGWGAVIIAEAVALIAASTVHRVCITTCFLFSAGLLYELSKLSGMALSKSESRVKR 120
           CGMRTGWGAVIIAEAVALIAASTVHRVCITTCFLFSAGLLYELSKLSGMALSKSESRVKR
Sbjct: 61  CGMRTGWGAVIIAEAVALIAASTVHRVCITTCFLFSAGLLYELSKLSGMALSKSESRVKR 120

Query: 121 H 122
           H
Sbjct: 121 H 121

[Close]

BLAST of CSPI06G20070 vs. TrEMBL
Match: D7T0X0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_19s0085g00270 PE=4 SV=1)

HSP 1 Score: 211.1 bits (536), Expect = 7.7e-52
Identity = 110/121 (90.91%), Postives = 118/121 (97.52%), Query Frame = 1


Query: 1   MAGSGSSMLYSFLLFIVILSLQEMYRGKLASSELFTILGGFVSSLLFLVLLTFIGNFQET 60
           MAGSGSSMLYSFLLF+VILSLQEMYRGKLASSELFTILGGF+SSL+FLVLLTFIGN QET
Sbjct: 1   MAGSGSSMLYSFLLFVVILSLQEMYRGKLASSELFTILGGFISSLIFLVLLTFIGNIQET 60

Query: 61  CGMRTGWGAVIIAEAVALIAASTVHRVCITTCFLFSAGLLYELSKLSGMALSKSESRVKR 120
           CGMRTGWGAVI+AEAVALIAASTVHRVCITTCFLFSAGLLYEL+KLSGM LSKSES+ +R
Sbjct: 61  CGMRTGWGAVILAEAVALIAASTVHRVCITTCFLFSAGLLYELNKLSGMMLSKSESKSRR 120

Query: 121 H 122
           +
Sbjct: 121 Y 121

[Close]

BLAST of CSPI06G20070 vs. TrEMBL
Match: A0A061FHK5_THECC (Keratinocyte-associated protein 2 isoform 1 OS=Theobroma cacao GN=TCM_035199 PE=4 SV=1)

HSP 1 Score: 210.3 bits (534), Expect = 1.3e-51
Identity = 109/121 (90.08%), Postives = 116/121 (95.87%), Query Frame = 1


Query: 1   MAGSGSSMLYSFLLFIVILSLQEMYRGKLASSELFTILGGFVSSLLFLVLLTFIGNFQET 60
           MAGSGSSMLYSFLLF VILSLQEMYRGKLASSELFTILGGF+SSLLFLV LTFIGNFQET
Sbjct: 1   MAGSGSSMLYSFLLFTVILSLQEMYRGKLASSELFTILGGFISSLLFLVSLTFIGNFQET 60

Query: 61  CGMRTGWGAVIIAEAVALIAASTVHRVCITTCFLFSAGLLYELSKLSGMALSKSESRVKR 120
           CGMRTGWGAVI+AE VALIAASTVHRVCITTCFLFSAGLLYE++K+SG+ LSKSES+ KR
Sbjct: 61  CGMRTGWGAVILAEVVALIAASTVHRVCITTCFLFSAGLLYEINKISGVTLSKSESKTKR 120

Query: 121 H 122
           H
Sbjct: 121 H 121

[Close]

BLAST of CSPI06G20070 vs. TrEMBL
Match: V4SIH0_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10002865mg PE=4 SV=1)

HSP 1 Score: 201.4 bits (511), Expect = 6.1e-49
Identity = 102/121 (84.30%), Postives = 116/121 (95.87%), Query Frame = 1


Query: 1   MAGSGSSMLYSFLLFIVILSLQEMYRGKLASSELFTILGGFVSSLLFLVLLTFIGNFQET 60
           MAGSGSSMLYSFL+FIVILSLQ+MYRGKLAS+ELFTILGGF+SSL+FLV LTFIGNFQET
Sbjct: 1   MAGSGSSMLYSFLMFIVILSLQQMYRGKLASTELFTILGGFISSLIFLVSLTFIGNFQET 60

Query: 61  CGMRTGWGAVIIAEAVALIAASTVHRVCITTCFLFSAGLLYELSKLSGMALSKSESRVKR 120
            GM+TGWGAVI+AE +ALIAASTVHRVCITTCFLFSAGLLYE++KLSGM +++SES+ KR
Sbjct: 61  SGMKTGWGAVIVAELIALIAASTVHRVCITTCFLFSAGLLYEVNKLSGMMIARSESKTKR 120

Query: 121 H 122
           H
Sbjct: 121 H 121

[Close]

BLAST of CSPI06G20070 vs. TrEMBL
Match: A0A067GYE6_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g033348mg PE=4 SV=1)

HSP 1 Score: 201.4 bits (511), Expect = 6.1e-49
Identity = 102/121 (84.30%), Postives = 116/121 (95.87%), Query Frame = 1


Query: 1   MAGSGSSMLYSFLLFIVILSLQEMYRGKLASSELFTILGGFVSSLLFLVLLTFIGNFQET 60
           MAGSGSSMLYSFL+FIVILSLQ+MYRGKLAS+ELFTILGGF+SSL+FLV LTFIGNFQET
Sbjct: 1   MAGSGSSMLYSFLMFIVILSLQQMYRGKLASTELFTILGGFISSLIFLVSLTFIGNFQET 60

Query: 61  CGMRTGWGAVIIAEAVALIAASTVHRVCITTCFLFSAGLLYELSKLSGMALSKSESRVKR 120
            GM+TGWGAVI+AE +ALIAASTVHRVCITTCFLFSAGLLYE++KLSGM +++SES+ KR
Sbjct: 61  SGMKTGWGAVIVAELIALIAASTVHRVCITTCFLFSAGLLYEVNKLSGMMIARSESKTKR 120

Query: 121 H 122
           H
Sbjct: 121 H 121

[Close]

BLAST of CSPI06G20070 vs. TAIR10
Match: AT1G77350.1 (AT1G77350.1 unknown protein)

HSP 1 Score: 175.3 bits (443), Expect = 2.4e-44
Identity = 93/122 (76.23%), Postives = 109/122 (89.34%), Query Frame = 1


Query: 1   MAGS-GSSMLYSFLLFIVILSLQEMYRGKLASSELFTILGGFVSSLLFLVLLTFIGNFQE 60
           MAG+ G+SML S ++F VILSLQE+YRGKLASSELFTILGGF SSLLFL  LTFIGNFQE
Sbjct: 1   MAGAVGTSMLGSLIVFTVILSLQEIYRGKLASSELFTILGGFTSSLLFLFSLTFIGNFQE 60

Query: 61  TCGMRTGWGAVIIAEAVALIAASTVHRVCITTCFLFSAGLLYELSKLSGMALSKSESRVK 120
           + G+++GWGAVI+AE +ALIAA TVHRVCITTCFLFSAGLLYE++K+SG  LSK+ES+ K
Sbjct: 61  SSGIKSGWGAVILAEIIALIAAGTVHRVCITTCFLFSAGLLYEVNKISGYMLSKTESKSK 120

Query: 121 RH 122
           RH
Sbjct: 121 RH 122

[Close]

BLAST of CSPI06G20070 vs. NCBI nr
Match: gi|449463420|ref|XP_004149432.1| (PREDICTED: protein KRTCAP2 homolog [Cucumis sativus])

HSP 1 Score: 225.7 bits (574), Expect = 4.3e-56
Identity = 121/121 (100.00%), Postives = 121/121 (100.00%), Query Frame = 1


Query: 1   MAGSGSSMLYSFLLFIVILSLQEMYRGKLASSELFTILGGFVSSLLFLVLLTFIGNFQET 60
           MAGSGSSMLYSFLLFIVILSLQEMYRGKLASSELFTILGGFVSSLLFLVLLTFIGNFQET
Sbjct: 1   MAGSGSSMLYSFLLFIVILSLQEMYRGKLASSELFTILGGFVSSLLFLVLLTFIGNFQET 60

Query: 61  CGMRTGWGAVIIAEAVALIAASTVHRVCITTCFLFSAGLLYELSKLSGMALSKSESRVKR 120
           CGMRTGWGAVIIAEAVALIAASTVHRVCITTCFLFSAGLLYELSKLSGMALSKSESRVKR
Sbjct: 61  CGMRTGWGAVIIAEAVALIAASTVHRVCITTCFLFSAGLLYELSKLSGMALSKSESRVKR 120

Query: 121 H 122
           H
Sbjct: 121 H 121

[Close]

BLAST of CSPI06G20070 vs. NCBI nr
Match: gi|659133512|ref|XP_008466763.1| (PREDICTED: protein KRTCAP2 homolog [Cucumis melo])

HSP 1 Score: 214.9 bits (546), Expect = 7.7e-53
Identity = 115/121 (95.04%), Postives = 118/121 (97.52%), Query Frame = 1


Query: 1   MAGSGSSMLYSFLLFIVILSLQEMYRGKLASSELFTILGGFVSSLLFLVLLTFIGNFQET 60
           MAGSGSSMLYSFLLFIVILSLQEMYRGKLASSELFTILGGFVSSLLFLVLLTFIGNFQET
Sbjct: 1   MAGSGSSMLYSFLLFIVILSLQEMYRGKLASSELFTILGGFVSSLLFLVLLTFIGNFQET 60

Query: 61  CGMRTGWGAVIIAEAVALIAASTVHRVCITTCFLFSAGLLYELSKLSGMALSKSESRVKR 120
            G+RTGWGAVI+AEAVALIAASTVHRVCITTCFLFSAGLLYEL+KLSG  LSKSESRVKR
Sbjct: 61  SGVRTGWGAVIVAEAVALIAASTVHRVCITTCFLFSAGLLYELNKLSGATLSKSESRVKR 120

Query: 121 H 122
           H
Sbjct: 121 H 121

[Close]

BLAST of CSPI06G20070 vs. NCBI nr
Match: gi|225465010|ref|XP_002264665.1| (PREDICTED: keratinocyte-associated protein 2 [Vitis vinifera])

HSP 1 Score: 211.1 bits (536), Expect = 1.1e-51
Identity = 110/121 (90.91%), Postives = 118/121 (97.52%), Query Frame = 1


Query: 1   MAGSGSSMLYSFLLFIVILSLQEMYRGKLASSELFTILGGFVSSLLFLVLLTFIGNFQET 60
           MAGSGSSMLYSFLLF+VILSLQEMYRGKLASSELFTILGGF+SSL+FLVLLTFIGN QET
Sbjct: 1   MAGSGSSMLYSFLLFVVILSLQEMYRGKLASSELFTILGGFISSLIFLVLLTFIGNIQET 60

Query: 61  CGMRTGWGAVIIAEAVALIAASTVHRVCITTCFLFSAGLLYELSKLSGMALSKSESRVKR 120
           CGMRTGWGAVI+AEAVALIAASTVHRVCITTCFLFSAGLLYEL+KLSGM LSKSES+ +R
Sbjct: 61  CGMRTGWGAVILAEAVALIAASTVHRVCITTCFLFSAGLLYELNKLSGMMLSKSESKSRR 120

Query: 121 H 122
           +
Sbjct: 121 Y 121

[Close]

BLAST of CSPI06G20070 vs. NCBI nr
Match: gi|590599427|ref|XP_007019178.1| (Keratinocyte-associated protein 2 isoform 1 [Theobroma cacao])

HSP 1 Score: 210.3 bits (534), Expect = 1.9e-51
Identity = 109/121 (90.08%), Postives = 116/121 (95.87%), Query Frame = 1


Query: 1   MAGSGSSMLYSFLLFIVILSLQEMYRGKLASSELFTILGGFVSSLLFLVLLTFIGNFQET 60
           MAGSGSSMLYSFLLF VILSLQEMYRGKLASSELFTILGGF+SSLLFLV LTFIGNFQET
Sbjct: 1   MAGSGSSMLYSFLLFTVILSLQEMYRGKLASSELFTILGGFISSLLFLVSLTFIGNFQET 60

Query: 61  CGMRTGWGAVIIAEAVALIAASTVHRVCITTCFLFSAGLLYELSKLSGMALSKSESRVKR 120
           CGMRTGWGAVI+AE VALIAASTVHRVCITTCFLFSAGLLYE++K+SG+ LSKSES+ KR
Sbjct: 61  CGMRTGWGAVILAEVVALIAASTVHRVCITTCFLFSAGLLYEINKISGVTLSKSESKTKR 120

Query: 121 H 122
           H
Sbjct: 121 H 121

[Close]

BLAST of CSPI06G20070 vs. NCBI nr
Match: gi|1009136904|ref|XP_015885777.1| (PREDICTED: protein KRTCAP2 homolog [Ziziphus jujuba])

HSP 1 Score: 209.5 bits (532), Expect = 3.2e-51
Identity = 109/121 (90.08%), Postives = 117/121 (96.69%), Query Frame = 1


Query: 1   MAGSGSSMLYSFLLFIVILSLQEMYRGKLASSELFTILGGFVSSLLFLVLLTFIGNFQET 60
           MA SGSSMLYSFLLF VILSLQEMYRGKLAS+ELFTILGGF+SSL+FLVLLTFIGNFQET
Sbjct: 1   MANSGSSMLYSFLLFTVILSLQEMYRGKLASTELFTILGGFISSLIFLVLLTFIGNFQET 60

Query: 61  CGMRTGWGAVIIAEAVALIAASTVHRVCITTCFLFSAGLLYELSKLSGMALSKSESRVKR 120
           CGMR+GWGAVIIAEAVALIAASTVHRVCITTCFLFS GLLYE++KLSG+ALSKSES+ KR
Sbjct: 61  CGMRSGWGAVIIAEAVALIAASTVHRVCITTCFLFSVGLLYEVNKLSGIALSKSESKTKR 120

Query: 121 H 122
           H
Sbjct: 121 H 121

The following BLAST results are available for this feature:

BLAST of CSPI06G20070 vs. Swiss-Prot


Match Name	E-value	Identity	Description
KTAP2_IXOSC	3.9e-12	38.89	Protein KRTCAP2 homolog OS=Ixodes scapularis PE=2 SV=1	[more]
KTAP2_BOVIN	3.6e-10	39.29	Keratinocyte-associated protein 2 OS=Bos taurus GN=KRTCAP2 PE=2 SV=1	[more]
KTAP2_HUMAN	3.6e-10	39.29	Keratinocyte-associated protein 2 OS=Homo sapiens GN=KRTCAP2 PE=1 SV=2	[more]
KTAP2_CANLF	4.7e-10	40.00	Keratinocyte-associated protein 2 OS=Canis lupus familiaris GN=KRTCAP2 PE=1 SV=1	[more]
KTAP2_MOUSE	1.0e-09	38.39	Keratinocyte-associated protein 2 OS=Mus musculus GN=Krtcap2 PE=1 SV=2	[more]

BLAST of CSPI06G20070 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KIU0_CUCSA	3.0e-56	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G381810 PE=4 SV=1	[more]
D7T0X0_VITVI	7.7e-52	90.91	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_19s0085g00270 PE=4 SV=...	[more]
A0A061FHK5_THECC	1.3e-51	90.08	Keratinocyte-associated protein 2 isoform 1 OS=Theobroma cacao GN=TCM_035199 PE=...	[more]
V4SIH0_9ROSI	6.1e-49	84.30	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10002865mg PE=4 SV=1	[more]
A0A067GYE6_CITSI	6.1e-49	84.30	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g033348mg PE=4 SV=1	[more]

BLAST of CSPI06G20070 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G77350.1	2.4e-44	76.23	unknown protein	[more]

BLAST of CSPI06G20070 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449463420\|ref\|XP_004149432.1\|	4.3e-56	100.00	PREDICTED: protein KRTCAP2 homolog [Cucumis sativus]	[more]
gi\|659133512\|ref\|XP_008466763.1\|	7.7e-53	95.04	PREDICTED: protein KRTCAP2 homolog [Cucumis melo]	[more]
gi\|225465010\|ref\|XP_002264665.1\|	1.1e-51	90.91	PREDICTED: keratinocyte-associated protein 2 [Vitis vinifera]	[more]
gi\|590599427\|ref\|XP_007019178.1\|	1.9e-51	90.08	Keratinocyte-associated protein 2 isoform 1 [Theobroma cacao]	[more]
gi\|1009136904\|ref\|XP_015885777.1\|	3.2e-51	90.08	PREDICTED: protein KRTCAP2 homolog [Ziziphus jujuba]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR018614	KRTCAP2

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006084	acetyl-CoA metabolic process
biological_process	GO:0016132	brassinosteroid biosynthetic process
biological_process	GO:0016126	sterol biosynthetic process
biological_process	GO:0008150	biological_process
cellular_component	GO:0005783	endoplasmic reticulum
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI06G20070.1	CSPI06G20070.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR018614	Uncharacterised protein family KRTCAP2	PFAM	PF09775	Keratin_assoc	coord: 4..117 score: 8.9
None	No IPR available	PANTHER	PTHR32001	FAMILY NOT NAMED	coord: 1..121 score: 7.5
None	No IPR available	PANTHER	PTHR32001:SF1	KERATINOCYTE-ASSOCIATED PROTEIN 2	coord: 1..121 score: 7.5

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CSPI06G20070	Cla013909	Watermelon (97103) v1	cpiwmB482
CSPI06G20070	Csa6G381810	Cucumber (Chinese Long) v2	cpicuB313
CSPI06G20070	ClCG08G005990	Watermelon (Charleston Gray)	cpiwcgB533
CSPI06G20070	CsaV3_6G034090	Cucumber (Chinese Long) v3	cpicucB363
CSPI06G20070	Cucsa.328160	Cucumber (Gy14) v1	cgycpiB492
CSPI06G20070	CmaCh04G023880	Cucurbita maxima (Rimu)	cmacpiB779
CSPI06G20070	CmoCh04G025040	Cucurbita moschata (Rifu)	cmocpiB770
CSPI06G20070	Cp4.1LG13g04460	Cucurbita pepo (Zucchini)	cpecpiB200
CSPI06G20070	Cp4.1LG01g20740	Cucurbita pepo (Zucchini)	cpecpiB462
CSPI06G20070	CsGy6G019540	Cucumber (Gy14) v2	cgybcpiB287
CSPI06G20070	Carg01555	Silver-seed gourd	carcpiB0871
CSPI06G20070	Carg15744	Silver-seed gourd	carcpiB0072

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CSPI06G20070	Watermelon (97103) v2	cpiwmbB523
CSPI06G20070	Wax gourd	cpiwgoB577
CSPI06G20070	Cucurbita maxima (Rimu)	cmacpiB316
CSPI06G20070	Cucurbita moschata (Rifu)	cmocpiB307
CSPI06G20070	Melon (DHL92) v3.5.1	cpimeB466
CSPI06G20070	Bottle gourd (USVL1VR-Ls)	cpilsiB489
CSPI06G20070	Melon (DHL92) v3.6.1	cpimedB458