Carg01177 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg01177
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Protein GET1
Location	Cucurbita_argyrosperma_scaffold_002 : 1340745 .. 1344524 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTAATTTACGGTGGCGCCAAAGAGATCCTCCGGAAATGGAAGCGGAAGAAATCGTAGAGCATCGGAACTCGATTGTGGCTCCGTCCATTTTTTTTATCGTCATTGCTTTTCAGTTTCTCGCCGGATGGCTGGATCACCTAAAGAAGGTTCGTCTTTTCCTTGATTTTCTTTTTTCCGTCCGAATTCTTTTCATGTTTGTATAATCTGTCGTTCTTACGTTTCAACCTTAAACTTGTCGTTAATAGTTTAATTTTGAGCTTTACCTCAAATTTCGGACTGTAGTGCGTTTCAGTTTTTCGTTGACAAACTTCAGAATGCAATATAGCCAACTGAGCTTCATTAAGTTCACGATATTGGATTGGAGACGTGGCGATTTGATGATTAGTTTAACGACGTGATGGAATCAATCTGGAGATCTGTTGATATTTTCATTCTTAATATCTAAGAATTTGCATTGTTATAGTTGTTGTCCGTCCAATCTTGTCAACGTGTTTGTTTTGACACAATCGTGTTTCAATCATGTATGTAATGTTCAGCGAGGTTCCAACAACCAGGTGGAAATGGAGTTGCGCAAATCAATAAAGCAACTTCTGAGGGAGGCAAGCACCTTATCTCAGTACGTAATTTCTCTAGCTCGGTTCAAGGTTAAAAGTGCATAATTCGGTTCAAATAACTCATCCTGTACGATTGGTTATAATTCTTATGACTATCTTGGGGATCATGTTCACTTGCTTTTTCGTTCGTGTAGACCATCTACATTTGCACAAGCTGCAAAACTTCGGAGATCGGCTGCCGCTAAGGAGAAGGAACTGGCTAATTGTGAGACTAATTAATTGATCCCCAAAATCTCATATCTTCCTTCAATTTACTTTTTCTGTTGTTTTTTTTTTTTTTTTTTTACTGGTGCGTTGTCAAAAGAATATTGTGAAATGCTTTATAAAACCTCTTATCGATAACCGGTAGGCAAACAATTTTGCTCTTGTAGTATGGTAAGGTTTGTTATATGAATCATCGATGCACAAGCAGTTCTTGAAGATATTGCTTGAAGTATTGACTGCTATGTGATATAGTATTCTCAGGATTTGGAGCTTAAGCAACCATTTAGCTATTGACCATTGAAAAGAATGGTTCTCAAATTTAAGAAACCATGGTTTATAGGCTCTAAACTAACAGTAACACGGCTGTGTATGCTGGTAAATGTGATTGCCACTGCTTCCAATTGAACTGGTTATTTATGGATGCAAATTCATCCCAGACGGTGCTCATACTGCAAGTCATGATTTCGTATTATGAATTATGGTCCTATGAATTGGGTGGAGTCCCTTGAATGACCTCGGATCTGTAGTATTCTTCTGCATGGGTGGGAACCGAAGAAATTTTATGAATGTCATAGCAAGTTGAAAGCAACTTCTCATTGGTAAAATTGGTCTTATTCTGGGAATCATGTTGAACGTAGGCATCAGCCCAAGCAAATTGGAGAATTTGATCTGGTCTATTGTGAAGTATTAAAAGCACTTCGTGATTGAAGTGTTGGCATCCAACTAATACAGGATTTGAGTTTGACGTAGATTAACTCATGTCAGTATGTTATGACATGCTTTTTATCCCTCGAATCTAACATCGCCCAAAATGGTTCCTGAAATATTGTATGTAGTTGTAGCTTTTGACTGCCATGTTTTCATGTTGGTGTCACGTTGTGTGTTTATGTATCTATTTCTTTGGTTACATTAATTCCCTTTTTTGGCCCTTATTAGATACCATTTTACAGTTACTTGTGAAGCACTGATAATATATGGGATTTACCAAGGTTATCTGTTTTCAATAATTTGTTTCAAGTTTTCCAACTAGCGAGAGTAATGTTTCGTGAACTTGTATTTTTCTTTTGTCTAAAATTCAATATCACTCAAAATGCATCTTGAAGATAAATTGTTATAAAAGAACAGTAAAATAGCCATATTTATCAAGATAGCGTAGCCTTGACTTCTGTTCATTTTATTTCAGTCGTTTTCTGCCATTAATTGCTTCCCATCCCTTCAGTATTACTTAATAAGATGCTTCAGATTACACCTTAGATTCTATTTGAATGACATTGCTTCCAGATCAAGAATCACGTAGTAAGAAGATCAAGTCGTCATATGGTTTATATAGTCGAGTACTGCTGATATCAAAGGTTATTATATTATTACTGAATTTTCTAATAAGTGTGTGTTCATATGTTGGATGTTTTCTTAAGTAAATATCTTGTGGTCGTGTAGGTTTTGATATATATTGTTCTCGTTTGCTGGTTTTGGAGGGCTTCTGTTGCCACTGTGCCCCATCACCTTGTACAGCCATTTGGTAATCACTCTCACCGCCAGCAGGATTTCTGTAGAACAATTATTATAGAGAAATGTCATTTCATTTTAAATTTTAACTATTACTTCTTGATACTCTCCCTTCTGCAGGAAGATTTTTATCTTGGAGGGCTGGAGGTACCGTAAATGATTACGTGAAGGTAGAACAATAATCACTTCTCAATTACCTGCAAATAACTCTTAGATCATTATGCGTTTCTTTTATCCCTTGAGAATAACATACCTGATACCATCACTAACACCCCCCCCCCCCCCCTCCCTCCCCCTCCCCCCTCCCCCCTCTTTCGAAACAAGATGTTTATATGGTTACCGTATCTGGTTTATGAAGGAAATGGTTTTAGGATAGAATTAGTAATGTGATTAGGGTCTTAAGTACATAGTAGCACTTAGCTAAAGGAGTTGTTTTGAGGGTTTGTTACAAATAGAGTGAGTGAGAATGGTTAAAGGTAGGCAGTCGTTTAGTAGAATTTAGGCTTAAGTTAGTATGCTCGAGGTTGAACGCTCCAACTACCTCAAATACTTGGGGAGTTATATTGTAATTCCGTTATCTTTTTTCTTTCTATATATCTAGGTTCTATCGGCTAGCCACAATCACGTCTGCACGTAATGAGAATATATGAGCATATGATGATTCTTAGCTCTTCTCAATGATGAACTGCAGGTTGGAATCATACCTTGGTTGATACTATCGACAAGGGTTAGCAAATTTGTATGTCGAGTAGCCAATTAAAAAAGTAATTGAAGGTAAAATGTGATGTTGATGATCACATGCTCTGTAAATTATTTGGCAAGCGCGATGTTTTCCTAAATTTCAATGCACAGGGAGGCTGGAGAAGTTTATACAGCCCCCACCACTTTTTCTTTTTATGTTCAAATGAGCTTCATCATTGTCGTTTTTTCCCCTTTTTTTCTCTCCCATATATTCCATTCATTCTTTTTTTTGGTGGACTCTTGCTCTTAGGTATCGTTTACATGTTTTTTCGTTACTTCATAGAATTACGATATTCGATATATAGCTTGGTTGCATATGCACAGAGTAAGGGGTGATTTGTTTGCATTTGTATCTTTTCGGGATGAAAATATTGAATATGTAGGATCCCGTTTGATAACGATTTTGTTTTCCGTTTCTTGTGAGTATTTTTTGTAACTGGTTTTGTTTCTCGGGAAATATTTCTTAGATTAGTTTATAATATGTGATGATACCTTTTCTTGGTATACTAAAAGTTCAAACTTCCTTTACCAAAGTTGGTAATGTCAATGTTGTAAACTGCCATAGGAGGACAATGGTTTTTGGTTATATGAAAATAAAGTAATTATGAAATTTCCATTTATTAACACACTTACCAATTTTAAACAACTTTTGAAAATCTCAATCGCTAACCGCTTTTGAAAATGTTATTGGAAAATGTAAAAAAGGGAATGCATA

mRNA sequence

TTAATTTACGGTGGCGCCAAAGAGATCCTCCGGAAATGGAAGCGGAAGAAATCGTAGAGCATCGGAACTCGATTGTGGCTCCGTCCATTTTTTTTATCGTCATTGCTTTTCAGTTTCTCGCCGGATGGCTGGATCACCTAAAGAAGCGAGGTTCCAACAACCAGGTGGAAATGGAGTTGCGCAAATCAATAAAGCAACTTCTGAGGGAGGCAAGCACCTTATCTCAACCATCTACATTTGCACAAGCTGCAAAACTTCGGAGATCGGCTGCCGCTAAGGAGAAGGAACTGGCTAATTATCAAGAATCACGTAGTAAGAAGATCAAGTCGTCATATGGTTTATATAGTCGAGTACTGCTGATATCAAAGGTTTTGATATATATTGTTCTCGTTTGCTGGTTTTGGAGGGCTTCTGTTGCCACTGTGCCCCATCACCTTGTACAGCCATTTGGAAGATTTTTATCTTGGAGGGCTGGAGGTACCGTAAATGATTACGTGAAGGTTGGAATCATACCTTGGTTGATACTATCGACAAGGGTTAGCAAATTTGTATGTCGAGTAGCCAATTAAAAAAGTAATTGAAGGTAAAATGTGATGTTGATGATCACATGCTCTGTAAATTATTTGGCAAGCGCGATGTTTTCCTAAATTTCAATGCACAGGGAGGCTGGAGAAGTTTATACAGCCCCCACCACTTTTTCTTTTTATGTTCAAATGAGCTTCATCATTGTCGTTTTTTCCCCTTTTTTTCTCTCCCATATATTCCATTCATTCTTTTTTTTGGTGGACTCTTGCTCTTAGGTATCGTTTACATGTTTTTTCGTTACTTCATAGAATTACGATATTCGATATATAGCTTGGTTGCATATGCACAGAGTAAGGGGTGATTTGTTTGCATTTGTATCTTTTCGGGATGAAAATATTGAATATGTAGGATCCCGTTTGATAACGATTTTGTTTTCCGTTTCTTGTGAGTATTTTTTGTAACTGGTTTTGTTTCTCGGGAAATATTTCTTAGATTAGTTTATAATATGTGATGATACCTTTTCTTGGTATACTAAAAGTTCAAACTTCCTTTACCAAAGTTGGTAATGTCAATGTTGTAAACTGCCATAGGAGGACAATGGTTTTTGGTTATATGAAAATAAAGTAATTATGAAATTTCCATTTATTAACACACTTACCAATTTTAAACAACTTTTGAAAATCTCAATCGCTAACCGCTTTTGAAAATGTTATTGGAAAATGTAAAAAAGGGAATGCATA

Coding sequence (CDS)

ATGGAAGCGGAAGAAATCGTAGAGCATCGGAACTCGATTGTGGCTCCGTCCATTTTTTTTATCGTCATTGCTTTTCAGTTTCTCGCCGGATGGCTGGATCACCTAAAGAAGCGAGGTTCCAACAACCAGGTGGAAATGGAGTTGCGCAAATCAATAAAGCAACTTCTGAGGGAGGCAAGCACCTTATCTCAACCATCTACATTTGCACAAGCTGCAAAACTTCGGAGATCGGCTGCCGCTAAGGAGAAGGAACTGGCTAATTATCAAGAATCACGTAGTAAGAAGATCAAGTCGTCATATGGTTTATATAGTCGAGTACTGCTGATATCAAAGGTTTTGATATATATTGTTCTCGTTTGCTGGTTTTGGAGGGCTTCTGTTGCCACTGTGCCCCATCACCTTGTACAGCCATTTGGAAGATTTTTATCTTGGAGGGCTGGAGGTACCGTAAATGATTACGTGAAGGTTGGAATCATACCTTGGTTGATACTATCGACAAGGGTTAGCAAATTTGTATGTCGAGTAGCCAATTAA

Protein sequence

MEAEEIVEHRNSIVAPSIFFIVIAFQFLAGWLDHLKKRGSNNQVEMELRKSIKQLLREASTLSQPSTFAQAAKLRRSAAAKEKELANYQESRSKKIKSSYGLYSRVLLISKVLIYIVLVCWFWRASVATVPHHLVQPFGRFLSWRAGGTVNDYVKVGIIPWLILSTRVSKFVCRVAN

Homology

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BLAST of Carg01177 vs. NCBI nr
Match: XP_022945757.1 (uncharacterized protein LOC111449636 [Cucurbita moschata])

HSP 1 Score: 283.1 bits (723), Expect = 6.5e-73
Identity = 176/177 (99.44%), Postives = 176/177 (99.44%), Query Frame = 0


Query: 1   MEAEEIVEHRNSIVAPSIFFIVIAFQFLAGWLDHLKKRGSNNQVEMELRKSIKQLLREAS 60
           MEAEEIVEHRNSIVAPSIF IVIAFQFLAGWLDHLKKRGSNNQVEMELRKSIKQLLREAS
Sbjct: 1   MEAEEIVEHRNSIVAPSIFLIVIAFQFLAGWLDHLKKRGSNNQVEMELRKSIKQLLREAS 60

Query: 61  TLSQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKIKSSYGLYSRVLLISKVLIYIVLVC 120
           TLSQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKIKSSYGLYSRVLLISKVLIYIVLVC
Sbjct: 61  TLSQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKIKSSYGLYSRVLLISKVLIYIVLVC 120

Query: 121 WFWRASVATVPHHLVQPFGRFLSWRAGGTVNDYVKVGIIPWLILSTRVSKFVCRVAN 178
           WFWRASVATVPHHLVQPFGRFLSWRAGGTVNDYVKVGIIPWLILSTRVSKFVCRVAN
Sbjct: 121 WFWRASVATVPHHLVQPFGRFLSWRAGGTVNDYVKVGIIPWLILSTRVSKFVCRVAN 177

[Close]

BLAST of Carg01177 vs. NCBI nr
Match: XP_022971588.1 (uncharacterized protein LOC111470261 [Cucurbita maxima])

HSP 1 Score: 280.4 bits (716), Expect = 4.2e-72
Identity = 145/177 (81.92%), Postives = 146/177 (82.49%), Query Frame = 0


Query: 1   MEAEEIVEHRNSIVAPSIFFIVIAFQFLAGWLDHLKKRGSNNQVEMELRKSIKQLLREAS 60
           MEAEEIVEHRNSIVAPSIF IVIAFQFLAGWLDHLKKRGSNNQVEMELRKSIKQLLREAS
Sbjct: 1   MEAEEIVEHRNSIVAPSIFLIVIAFQFLAGWLDHLKKRGSNNQVEMELRKSIKQLLREAS 60

Query: 61  TLSQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKIKSSYGLYSRVLLISKVLIYIVLVC 120
           TLSQ                             KK+KSSYGLYSRVLLISKVLIYIVLVC
Sbjct: 61  TLSQPSTFAQAAKLRRLAAAKEKELANYQESRSKKVKSSYGLYSRVLLISKVLIYIVLVC 120

Query: 121 WFWRASVATVPHHLVQPFGRFLSWRAGGTVNDYVKVGIIPWLILSTRVSKFVCRVAN 178
           WFWRASVATVPHHLVQPFGRFLSWRAGG VNDYVKVGIIPWLILSTRVSKFVCRVAN
Sbjct: 121 WFWRASVATVPHHLVQPFGRFLSWRAGGIVNDYVKVGIIPWLILSTRVSKFVCRVAN 177

[Close]

BLAST of Carg01177 vs. NCBI nr
Match: XP_008448478.1 (PREDICTED: uncharacterized protein LOC103490650 [Cucumis melo])

HSP 1 Score: 249.2 bits (635), Expect = 1.0e-62
Identity = 128/175 (73.14%), Postives = 139/175 (79.43%), Query Frame = 0


Query: 1   MEAEEIVEHRNSIVAPSIFFIVIAFQFLAGWLDHLKKRGSNNQVEMELRKSIKQLLREAS 60
           MEAE IVEH +SI AP IFFIVI FQFLA WL+HLKK GSN+QVE+ELRKSIKQLLREAS
Sbjct: 3   MEAEGIVEHGSSIAAPFIFFIVIGFQFLARWLEHLKKGGSNSQVELELRKSIKQLLREAS 62

Query: 61  TLSQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKIKSSYGLYSRVLLISKVLIYIVLVC 120
           TLSQ                             K+IK+SYGLYS+VLLISKV+IYIVLVC
Sbjct: 63  TLSQPSTFAQAAKLRRLAAAKEKELANYQESRNKEIKTSYGLYSQVLLISKVIIYIVLVC 122

Query: 121 WFWRASVATVPHHLVQPFGRFLSWRAGGTVNDYVKVGIIPWLILSTRVSKFVCRV 176
           WFWRASVATVPHHLVQPFG+FLSW+AGGTVNDYVKVGIIPWLILSTRVSKFVC+V
Sbjct: 123 WFWRASVATVPHHLVQPFGKFLSWKAGGTVNDYVKVGIIPWLILSTRVSKFVCQV 177

[Close]

BLAST of Carg01177 vs. NCBI nr
Match: XP_004146176.1 (PREDICTED: uncharacterized protein LOC101204142 [Cucumis sativus] >KGN55607.1 hypothetical protein Csa_3G002280 [Cucumis sativus])

HSP 1 Score: 248.8 bits (634), Expect = 1.4e-62
Identity = 128/175 (73.14%), Postives = 139/175 (79.43%), Query Frame = 0


Query: 1   MEAEEIVEHRNSIVAPSIFFIVIAFQFLAGWLDHLKKRGSNNQVEMELRKSIKQLLREAS 60
           ME E IVEHR+SI AP IFFIVI FQFLA WL+HLKKRGSN+QVEMELRKSIKQLL+EAS
Sbjct: 1   MEPEGIVEHRSSIAAPFIFFIVIGFQFLAKWLEHLKKRGSNSQVEMELRKSIKQLLKEAS 60

Query: 61  TLSQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKIKSSYGLYSRVLLISKVLIYIVLVC 120
           TLSQ                             K+IK+SYGLYS+VLL+SKV+I+IVLVC
Sbjct: 61  TLSQPSTFAQAAKLRRLAAAKEKELANYQESRNKEIKTSYGLYSQVLLVSKVIIHIVLVC 120

Query: 121 WFWRASVATVPHHLVQPFGRFLSWRAGGTVNDYVKVGIIPWLILSTRVSKFVCRV 176
           WFWRASVATVPHHLVQPFG+FLSWRAGGTVNDYVKVGIIPWLILSTRVSKFV RV
Sbjct: 121 WFWRASVATVPHHLVQPFGKFLSWRAGGTVNDYVKVGIIPWLILSTRVSKFVFRV 175

[Close]

BLAST of Carg01177 vs. NCBI nr
Match: XP_023007643.1 (uncharacterized protein LOC111500212 [Cucurbita maxima])

HSP 1 Score: 239.2 bits (609), Expect = 1.1e-59
Identity = 125/174 (71.84%), Postives = 133/174 (76.44%), Query Frame = 0


Query: 2   EAEEIVEHRNSIVAPSIFFIVIAFQFLAGWLDHLKKRGSNNQVEMELRKSIKQLLREAST 61
           EAE IVEHR+SI AP IF IVIAFQFLA WL+HLKK GSN+QVEMELRKSIKQLLREAST
Sbjct: 6   EAEGIVEHRSSIAAPCIFLIVIAFQFLARWLEHLKKGGSNSQVEMELRKSIKQLLREAST 65

Query: 62  LSQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKIKSSYGLYSRVLLISKVLIYIVLVCW 121
           LSQ                             K+IK+SYGLYSRVLLISKV +YI LV W
Sbjct: 66  LSQPSTFAQAAKLRRLAAAKEKELANYQESRNKEIKTSYGLYSRVLLISKVFMYITLVFW 125

Query: 122 FWRASVATVPHHLVQPFGRFLSWRAGGTVNDYVKVGIIPWLILSTRVSKFVCRV 176
           FWR SVATVPHHLVQPFGR LSW+AGG VNDYVKVGIIPWLILSTRVSKFVC+V
Sbjct: 126 FWRVSVATVPHHLVQPFGRVLSWKAGGIVNDYVKVGIIPWLILSTRVSKFVCQV 179

[Close]

BLAST of Carg01177 vs. TAIR10
Match: AT4G16444.1 (FUNCTIONS IN: molecular_function unknown)

HSP 1 Score: 162.9 bits (411), Expect = 1.8e-40
Identity = 85/174 (48.85%), Postives = 104/174 (59.77%), Query Frame = 0


Query: 1   MEAEEIVEHRNSIVAPSIFFIVIAFQFLAGWLDHLKKRGSNNQVEMELRKSIKQLLREAS 60
           ME E+++E R  + AP  F +V+ FQ L+ WLD LKK+GS N  E ELR  IKQLLREAS
Sbjct: 1   MEGEKLIEDRGFLAAPLTFVVVVVFQLLSKWLDQLKKKGSKNTRESELRTEIKQLLREAS 60

Query: 61  TLSQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKIKSSYGLYSRVLLISKVLIYIVLVC 120
            LSQ                             K+IK SY +Y + LL SKV+IY++LV 
Sbjct: 61  ALSQPATFAQAAKLRRSAATKEKELAQYLEQHHKEIKLSYDMYGKGLLASKVVIYLILVL 120

Query: 121 WFWRASVATVPHHLVQPFGRFLSWRAGGTVNDYVKVGIIPWLILSTRVSKFVCR 175
            FWR  +A +   LVQPFG  LSW  GG +  +V VGIIPWLILS RVSK+VCR
Sbjct: 121 CFWRTPIAIIAKQLVQPFGTLLSWGTGGHMTGHVMVGIIPWLILSNRVSKYVCR 174

[Close]

BLAST of Carg01177 vs. TrEMBL
Match: tr|A0A1S3BKE1|A0A1S3BKE1_CUCME (uncharacterized protein LOC103490650 OS=Cucumis melo OX=3656 GN=LOC103490650 PE=4 SV=1)

HSP 1 Score: 249.2 bits (635), Expect = 6.9e-63
Identity = 128/175 (73.14%), Postives = 139/175 (79.43%), Query Frame = 0


Query: 1   MEAEEIVEHRNSIVAPSIFFIVIAFQFLAGWLDHLKKRGSNNQVEMELRKSIKQLLREAS 60
           MEAE IVEH +SI AP IFFIVI FQFLA WL+HLKK GSN+QVE+ELRKSIKQLLREAS
Sbjct: 3   MEAEGIVEHGSSIAAPFIFFIVIGFQFLARWLEHLKKGGSNSQVELELRKSIKQLLREAS 62

Query: 61  TLSQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKIKSSYGLYSRVLLISKVLIYIVLVC 120
           TLSQ                             K+IK+SYGLYS+VLLISKV+IYIVLVC
Sbjct: 63  TLSQPSTFAQAAKLRRLAAAKEKELANYQESRNKEIKTSYGLYSQVLLISKVIIYIVLVC 122

Query: 121 WFWRASVATVPHHLVQPFGRFLSWRAGGTVNDYVKVGIIPWLILSTRVSKFVCRV 176
           WFWRASVATVPHHLVQPFG+FLSW+AGGTVNDYVKVGIIPWLILSTRVSKFVC+V
Sbjct: 123 WFWRASVATVPHHLVQPFGKFLSWKAGGTVNDYVKVGIIPWLILSTRVSKFVCQV 177

[Close]

BLAST of Carg01177 vs. TrEMBL
Match: tr|A0A0A0L4T9|A0A0A0L4T9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G002280 PE=4 SV=1)

HSP 1 Score: 248.8 bits (634), Expect = 8.9e-63
Identity = 128/175 (73.14%), Postives = 139/175 (79.43%), Query Frame = 0


Query: 1   MEAEEIVEHRNSIVAPSIFFIVIAFQFLAGWLDHLKKRGSNNQVEMELRKSIKQLLREAS 60
           ME E IVEHR+SI AP IFFIVI FQFLA WL+HLKKRGSN+QVEMELRKSIKQLL+EAS
Sbjct: 1   MEPEGIVEHRSSIAAPFIFFIVIGFQFLAKWLEHLKKRGSNSQVEMELRKSIKQLLKEAS 60

Query: 61  TLSQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKIKSSYGLYSRVLLISKVLIYIVLVC 120
           TLSQ                             K+IK+SYGLYS+VLL+SKV+I+IVLVC
Sbjct: 61  TLSQPSTFAQAAKLRRLAAAKEKELANYQESRNKEIKTSYGLYSQVLLVSKVIIHIVLVC 120

Query: 121 WFWRASVATVPHHLVQPFGRFLSWRAGGTVNDYVKVGIIPWLILSTRVSKFVCRV 176
           WFWRASVATVPHHLVQPFG+FLSWRAGGTVNDYVKVGIIPWLILSTRVSKFV RV
Sbjct: 121 WFWRASVATVPHHLVQPFGKFLSWRAGGTVNDYVKVGIIPWLILSTRVSKFVFRV 175

[Close]

BLAST of Carg01177 vs. TrEMBL
Match: tr|A0A2I4HCV3|A0A2I4HCV3_9ROSI (uncharacterized protein LOC109015966 OS=Juglans regia OX=51240 GN=LOC109015987 PE=4 SV=1)

HSP 1 Score: 188.0 bits (476), Expect = 1.9e-44
Identity = 99/178 (55.62%), Postives = 116/178 (65.17%), Query Frame = 0


Query: 1   MEAEEIVEHRNSIVAPSIFFIVIAFQFLAGWLDHLKK-RGSNNQVEMELRKSIKQLLREA 60
           M  EE + HR S+ AP IF IVI FQFL+ WL+H KK RGS + V ++LR  IKQLL+EA
Sbjct: 1   MGGEETLGHRGSLAAPLIFMIVIGFQFLSRWLEHFKKNRGSKSAVSIQLRGEIKQLLKEA 60

Query: 61  STLSQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKIKSSYGLYSRVLLISKVLIYIVLV 120
           S+LSQ                             K++K SY LY +VL +SKV  Y VLV
Sbjct: 61  SSLSQPSTFAQAAKLRRLAAAKEKELANYQESKSKEMKVSYDLYLKVLFLSKVFTYFVLV 120

Query: 121 CWFWRASVATVPHHLVQPFGRFLSWRAGGTVNDYVKVGIIPWLILSTRVSKFVCRVAN 178
           CWFWR  VAT+   LVQPFGR LSWRAGGT+N+ V VGIIPWLILSTRVSKFVCR+ N
Sbjct: 121 CWFWRVPVATISEQLVQPFGRVLSWRAGGTLNNNVMVGIIPWLILSTRVSKFVCRLFN 178

[Close]

BLAST of Carg01177 vs. TrEMBL
Match: tr|A0A2P6RL91|A0A2P6RL91_ROSCH (Putative WRB/Get1 family protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr2g0097211 PE=4 SV=1)

HSP 1 Score: 179.5 bits (454), Expect = 6.7e-42
Identity = 92/172 (53.49%), Postives = 110/172 (63.95%), Query Frame = 0


Query: 4   EEIVEHRNSIVAPSIFFIVIAFQFLAGWLDHLKKRGSNNQVEMELRKSIKQLLREASTLS 63
           E + EHR S  AP +F IV+AFQF+  WL+ LKKRG     E  LR+ IK+LL+EAS+LS
Sbjct: 6   ETLSEHRISAAAPVVFLIVVAFQFVYRWLEQLKKRGPKTAEETRLRREIKELLKEASSLS 65

Query: 64  QXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKIKSSYGLYSRVLLISKVLIYIVLVCWFW 123
           Q                             K+IK SY LY +VL ISKVL Y+VLVCWFW
Sbjct: 66  QPSTFAQAAKLKRMATSKEKELANYQELHGKEIKGSYDLYLKVLFISKVLTYLVLVCWFW 125

Query: 124 RASVATVPHHLVQPFGRFLSWRAGGTVNDYVKVGIIPWLILSTRVSKFVCRV 176
           R  VA++   LVQPFG+ +SWRAGG +N  V VGIIPWLILSTRVSKFVCR+
Sbjct: 126 RVPVASISQQLVQPFGKVISWRAGGVLNGNVMVGIIPWLILSTRVSKFVCRL 177

[Close]

BLAST of Carg01177 vs. TrEMBL
Match: tr|A0A2P4HTN7|A0A2P4HTN7_QUESU (Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_19179 PE=4 SV=1)

HSP 1 Score: 176.4 bits (446), Expect = 5.6e-41
Identity = 92/175 (52.57%), Postives = 112/175 (64.00%), Query Frame = 0


Query: 2   EAEEIVEHRNSIVAPSIFFIVIAFQFLAGWLDHLKKR-GSNNQVEMELRKSIKQLLREAS 61
           E  E V HR S+ AP  F IVI FQ L+GWL+ LK++ GS N   ++LR  IKQLL+EAS
Sbjct: 3   EEVESVGHRASVAAPLTFTIVITFQLLSGWLERLKRKGGSTNATVIQLRGEIKQLLKEAS 62

Query: 62  TLSQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKIKSSYGLYSRVLLISKVLIYIVLVC 121
           +LSQ                             K++K SY LY +VL + KVL Y VL+C
Sbjct: 63  SLSQPSTFAQAAKLRRLAAAKEKELANYQESHSKEMKMSYDLYLKVLFLFKVLTYFVLIC 122

Query: 122 WFWRASVATVPHHLVQPFGRFLSWRAGGTVNDYVKVGIIPWLILSTRVSKFVCRV 176
           WFWR  VAT+   LVQPFG+ LSWR GGT+N++V VGIIPWLILSTRVSKFVCR+
Sbjct: 123 WFWRVPVATISQRLVQPFGKLLSWRTGGTLNNHVMVGIIPWLILSTRVSKFVCRL 177

The following BLAST results are available for this feature:

BLAST of Carg01177 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022945757.1	6.5e-73	99.44	uncharacterized protein LOC111449636 [Cucurbita moschata]	[more]
XP_022971588.1	4.2e-72	81.92	uncharacterized protein LOC111470261 [Cucurbita maxima]	[more]
XP_008448478.1	1.0e-62	73.14	PREDICTED: uncharacterized protein LOC103490650 [Cucumis melo]	[more]
XP_004146176.1	1.4e-62	73.14	PREDICTED: uncharacterized protein LOC101204142 [Cucumis sativus] >KGN55607.1 hy...	[more]
XP_023007643.1	1.1e-59	71.84	uncharacterized protein LOC111500212 [Cucurbita maxima]	[more]

BLAST of Carg01177 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G16444.1	1.8e-40	48.85	FUNCTIONS IN: molecular_function unknown	[more]

BLAST of Carg01177 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Carg01177 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BKE1\|A0A1S3BKE1_CUCME	6.9e-63	73.14	uncharacterized protein LOC103490650 OS=Cucumis melo OX=3656 GN=LOC103490650 PE=...	[more]
tr\|A0A0A0L4T9\|A0A0A0L4T9_CUCSA	8.9e-63	73.14	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G002280 PE=4 SV=1	[more]
tr\|A0A2I4HCV3\|A0A2I4HCV3_9ROSI	1.9e-44	55.62	uncharacterized protein LOC109015966 OS=Juglans regia OX=51240 GN=LOC109015987 P...	[more]
tr\|A0A2P6RL91\|A0A2P6RL91_ROSCH	6.7e-42	53.49	Putative WRB/Get1 family protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr2g009...	[more]
tr\|A0A2P4HTN7\|A0A2P4HTN7_QUESU	5.6e-41	52.57	Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_19179 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0071816	tail-anchored membrane protein insertion into ER membrane

Vocabulary: **INTERPRO**
Term	Definition
IPR028945	WRB/Get1

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0071816	tail-anchored membrane protein insertion into ER membrane
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg01177-RA	Carg01177-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 71..91
None	No IPR available	PANTHER	PTHR11760	30S/40S RIBOSOMAL PROTEIN S3	coord: 15..174
None	No IPR available	PANTHER	PTHR11760:SF21	SUBFAMILY NOT NAMED	coord: 15..174
IPR028945	WRB/Get1 family	PFAM	PF04420	CHD5	coord: 39..161 e-value: 3.9E-10 score: 39.7

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg01177	Cla008945	Watermelon (97103) v1	carwmB0149
Carg01177	Csa3G002280	Cucumber (Chinese Long) v2	carcuB0173
Carg01177	MELO3C013722	Melon (DHL92) v3.5.1	carmeB0165
Carg01177	ClCG10G000250	Watermelon (Charleston Gray)	carwcgB0148
Carg01177	CSPI03G00270	Wild cucumber (PI 183967)	carcpiB0179
Carg01177	Cucsa.323110	Cucumber (Gy14) v1	carcgyB0197
Carg01177	CmaCh06G001580	Cucurbita maxima (Rimu)	carcmaB0216
Carg01177	CmaCh16G012760	Cucurbita maxima (Rimu)	carcmaB0205
Carg01177	CmoCh16G013270	Cucurbita moschata (Rifu)	carcmoB0216
Carg01177	CmoCh06G001490	Cucurbita moschata (Rifu)	carcmoB0227
Carg01177	Lsi07G010530	Bottle gourd (USVL1VR-Ls)	carlsiB146
Carg01177	Cp4.1LG08g12840	Cucurbita pepo (Zucchini)	carcpeB0233
Carg01177	Cp4.1LG14g10460	Cucurbita pepo (Zucchini)	carcpeB0223
Carg01177	MELO3C013722.2	Melon (DHL92) v3.6.1	carmedB0166
Carg01177	CsaV3_3G000280	Cucumber (Chinese Long) v3	carcucB0179
Carg01177	Cla97C10G184780	Watermelon (97103) v2	carwmbB0160
Carg01177	Bhi11G000218	Wax gourd	carwgoB0198

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg01177	Carg19437	Silver-seed gourd	carcarB191

The following block(s) are covering this gene:


Gene	Organism	Block
Carg01177	Silver-seed gourd	carcarB189
Carg01177	Cucumber (Gy14) v2	carcgybB0168