CSPI03G00270 (gene) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI03G00270
Type	gene
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages;
Location	Chr3 : 229653 .. 233440 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAACCTCTTCCAGAATAACCTCCGTCCAATTGCGACGATGAACGGAGTTTCTTTTGTTTGATTAATTCACTGTTGTGGCAGAAAATTCTCTGGAAATGGAACCGGAAGGAATTGTAGAGCATCGAAGCTCCATTGCCGCTCCATTCATTTTCTTTATCGTTATCGGTTTTCAGTTTCTCGCTAAATGGCTGGAGCACCTGAAGAAGGTTCGCCTTTTCGTTTGATTTTATTTTTTCCGTTGGAATTCTTTTCGTGTTTGTATTTTTTATCATTCCGCTTGTTTTTCAATCCTAAGCTTGTTATTTATAATTGAATTTTGAGGTTTGAGCTGTAGCGCGTTTCAGTATTTTTGTTGACAGACTTGAGAATGCAATTTATCTAACTGTGCTTCGTGAAGTTTACGATATTGGATTGAAGACATTGTGATTTGATTAGTTTAGGAACGTGATGCATTTAATGTGGAGATCTATGGACATTTTCAGTTTTAATGTCTGGGAATTTGCTAATGTTATAATTTGTTATCCGTTCAATCTTGTCAACTTGTTTGTTTTGAAACAATCGTGTTTCCATCATGCGTGTACTTTTCAGAGAGGTTCCAACAGCCAGGTGGAAATGGAGTTGCGCAAATCAATAAAGCAACTTCTGAAGGAGGCTAGCACCTTATCTCAGTGAGTAGTATTTTCCAGCTCGATTCAGCATTAGACAGTGTTAATTTGGCTCAAATCATCTTACAAAAAAAAAAAAAGGCTCAAATCATTCATTCTATATGATTGTTTGCAACTGTTATGGCTGTCATGGGGATCATATTTATTTGCGTTTATGTTCTTGTAGACCATCTACATTTGCACAGGCTGCAAAACTTCGGAGGTTGGCAGCCGCTAAGGAGAAGGAGCTGGCAAATTGTGAGGCTATAATTAATTCATCCCCCGATATTCAAATGTTCCCTTAATTTTTTTTTTAGCTAATGAGTTGCTGAGAGAATATTGTGAAATGCTTTATACCTCTTCTCATCAATAACGGGTAGGGGAATAAGTTTGCTATTGTATGGTAAGGTTTGCTTTATAAAACATCGTTGCATGAGCAGTTTTGAGGATGTTGCTTGGACCATTGACTGTTATGTGATATAGGAATCTAAGGATTAGAAGCTTGAGCAACCACTAAGCTATTGACAATTAGAAAGAATGGTTCTCTTATTGAAACCAAAGAAAAAAAAGGTTATACACTCCAAACTAACAGTAAGATGGGTGTATGTGCTGGTAAATGTTATTGCCGCTCCATCCAATGAAACTGGGTAATCGTAAATATATTTGCAACTTCATCCAACATGGTGCTCATGCTGCCAATTGATTCATATATGGACCATGGTTTAACCGTTGGAACTTGGAGATCATCGAACAAGCTCTTGTCTATAATATGACTCTGGATGGGAGGGAACTAAAGAAGTGTTATGTATATCATAGCAAGTTGAAAGCAACTACTCATTGGTAAAATCGGTCTTATTCTAGGAATCGTGGTAAATGTACTACATTAGGCGTTAGCACATGCAAATGGGAGAAGTTGATTTACTCTATTGTGAATGATTGTTGCATGCTTGAGGTGTCGGCATCCAACTAATATAGGATATTGACGTAGATGAACTTGTGTAGTGGCACCCTTTCTTATACAAGACCATGTTTTCCTTGACAATATGTGGAGTGGGGGGGGAAACCTCTGGCCTTGAGGTCAATAGAGTTTTATGCCAGTTTTTTTCAAATCTAATATCACCCCTAATTCTAACTAAAATGTTGTGTGGCATAGTTTGGCCCATGTTAAATGCCAATTTTGATGTAGGGCTTTACCAAGGTTATCCATGTTCAATTATTCGTTTCAAGTTATCCAACTACTGAGAGTGATTCTTATGTTTTCTAAAAGGCCAATATCACTCAATATGCATCTTGAAGTCTAGCTAAAATATAAGAGCAGTAAAATAGTCTTATTTATCATTATAGCCTAGCCTCAATTTCTGTTCATCTTATTTCAGTTGTTTTCTCCAATTGATTACTTTCCTTCCCTTGTGTACTACTTATTAAGATGCTTCGGATTACACTTTTAATTCAATTTGAATGACATTGCTGCCAGATCAAGAATCACGTAATAAGGAGATCAAGACGTCATATGGTTTATATAGTCAAGTACTGTTGGTATCGAAGGTATTATGTTCTTCTAAATGTTCTTCTAAATGTGTCTATATGTTTGCAGTTCTTTAAAAAGTTTGTTATCTTATGGTCATGTAGGTTATTATACATATTGTGCTGGTTTGCTGGTTTTGGAGAGCTTCTGTTGCTACTGTACCTCATCACCTTGTGCAGCCATTTGGTAATCACTCTCATCGCAAGCATAATTTCTGAAGAACTATTAAAAATATGTCATTTCATTTAAAATTTTAAATATCAGTGTCTTGATGAATCCCCCTACTGCAGGAAAGTTTTTATCTTGGAGGGCTGGAGGTACCGTAAATGATTATGTGAAGGTAGAATTCTCATTTATTTGCATATAACCTCATCGATCATATTGCATTTATTTTATCTCTTGACCATAAACATAACACCACTTTCACCCAAAGAAATGATATTAGTGAGGAATGAATGTTCTGCTTCGATTGAGGAGGTGCTCCTAGGTTTGCCAATTTGGAAGGAAGGAAAAGTTTTGTGGCCCACTAGTTTCTTTGCTATCTTCAATCTCGTGGGGGGTTTGGCTTGAGAGAGACAATAGGATTTCTTAGAGAGATGTGCGGGAGGAGGTGAGGTTTAACTAACACCTAGTTGAGGGCATCCACCACTGGACCTTTTTGTAATTTCTTCGATTGGTAGTGATTTTTGGCTTGGATGCCCTTGTTGTAGGTTTTTTTGGACTTTTATTTTTGTTGGCCATTGTTTTCTTGCTGAAATCTCGGTTTCTTACCAAAAGATTAAAAAATACAGCAGTAAAGAGTTGGGGTAGTTTTAAACAGTGATTTGTTATAAATAGAATGAGCGTAAAAAGTTAAATTTATCAATTATTTTGTTGGTTTTTGTTGGATTATGGCTTAAGTAATCTCAATAACTAACTAAGAGCTCATGGGTTCAATACATGGTTGTTCTGTGAGATTAGTCGAGATGTGCATAAACCGATTCGGACATTTACGGATTAAAAAAAATTAGTGCTTGAGTGGGGAAGATTCTCGGAACCTCAAATACTAGAGGGTGTTTTATTTTATATTAGGCAACTACATATAATAACATGAAATTACTATCTATCACCACAATCATGGCTCTGCACAAATGAGAGAGTATGGTGATTCGTAGGTAAATTTTAATGATGAACTGCAGGTTGGAATTATACCTTGGTTGATACTGTCCACAAGGGTTAGCAAGTTTGTATTTCGAGTGGTGAAGTAAAAATGGGGATTGAAGGTAATTGTGATGAAGAATGAACGATACATCGCCACATGTGCTATGTACAATATTTGGCAACCAATATTTTCCTAAATGTGAGGGGTGGCTGGAGAAGTTTTTACAGCCCCACCACTATTTCTTCTTGTAAGGTTCAGCATTGTTGTTCTTTTTCTTTCTTTTCCCACCATATATTTTCCCTTTCATTCTTCTTTTTTGGGAAACTCTTTATCTTAGGTATCATTTATTGTTATTATTTTTTACTTAGAATTAAGATATTCTATAGATATATATATATAGATTGGTTGCCTGTATGCTGCTTAGGGTAAGGGAAGGTTGGATCCTAAATCTTCACTAATCTTAGTGCTAAAAAAAAAT

mRNA sequence

ATGGAACCGGAAGGAATTGTAGAGCATCGAAGCTCCATTGCCGCTCCATTCATTTTCTTTATCGTTATCGGTTTTCAGTTTCTCGCTAAATGGCTGGAGCACCTGAAGAAGAGAGGTTCCAACAGCCAGGTGGAAATGGAGTTGCGCAAATCAATAAAGCAACTTCTGAAGGAGGCTAGCACCTTATCTCAACCATCTACATTTGCACAGGCTGCAAAACTTCGGAGGTTGGCAGCCGCTAAGGAGAAGGAGCTGGCAAATTATCAAGAATCACGTAATAAGGAGATCAAGACGTCATATGGTTTATATAGTCAAGTACTGTTGGTATCGAAGGTTATTATACATATTGTGCTGGTTTGCTGGTTTTGGAGAGCTTCTGTTGCTACTGTACCTCATCACCTTGTGCAGCCATTTGGAAAGTTTTTATCTTGGAGGGCTGGAGGTACCGTAAATGATTATGTGAAGGTTGGAATTATACCTTGGTTGATACTGTCCACAAGGGTTAGCAAGTTTGTATTTCGAGTGGTGAAGTAA

Coding sequence (CDS)

ATGGAACCGGAAGGAATTGTAGAGCATCGAAGCTCCATTGCCGCTCCATTCATTTTCTTTATCGTTATCGGTTTTCAGTTTCTCGCTAAATGGCTGGAGCACCTGAAGAAGAGAGGTTCCAACAGCCAGGTGGAAATGGAGTTGCGCAAATCAATAAAGCAACTTCTGAAGGAGGCTAGCACCTTATCTCAACCATCTACATTTGCACAGGCTGCAAAACTTCGGAGGTTGGCAGCCGCTAAGGAGAAGGAGCTGGCAAATTATCAAGAATCACGTAATAAGGAGATCAAGACGTCATATGGTTTATATAGTCAAGTACTGTTGGTATCGAAGGTTATTATACATATTGTGCTGGTTTGCTGGTTTTGGAGAGCTTCTGTTGCTACTGTACCTCATCACCTTGTGCAGCCATTTGGAAAGTTTTTATCTTGGAGGGCTGGAGGTACCGTAAATGATTATGTGAAGGTTGGAATTATACCTTGGTTGATACTGTCCACAAGGGTTAGCAAGTTTGTATTTCGAGTGGTGAAGTAA

Homology

[Close]

BLAST of CSPI03G00270 vs. TrEMBL
Match: A0A0A0L4T9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G002280 PE=4 SV=1)

HSP 1 Score: 345.1 bits (884), Expect = 5.0e-92
Identity = 177/177 (100.00%), Postives = 177/177 (100.00%), Query Frame = 1


Query: 1   MEPEGIVEHRSSIAAPFIFFIVIGFQFLAKWLEHLKKRGSNSQVEMELRKSIKQLLKEAS 60
           MEPEGIVEHRSSIAAPFIFFIVIGFQFLAKWLEHLKKRGSNSQVEMELRKSIKQLLKEAS
Sbjct: 1   MEPEGIVEHRSSIAAPFIFFIVIGFQFLAKWLEHLKKRGSNSQVEMELRKSIKQLLKEAS 60

Query: 61  TLSQPSTFAQAAKLRRLAAAKEKELANYQESRNKEIKTSYGLYSQVLLVSKVIIHIVLVC 120
           TLSQPSTFAQAAKLRRLAAAKEKELANYQESRNKEIKTSYGLYSQVLLVSKVIIHIVLVC
Sbjct: 61  TLSQPSTFAQAAKLRRLAAAKEKELANYQESRNKEIKTSYGLYSQVLLVSKVIIHIVLVC 120

Query: 121 WFWRASVATVPHHLVQPFGKFLSWRAGGTVNDYVKVGIIPWLILSTRVSKFVFRVVK 178
           WFWRASVATVPHHLVQPFGKFLSWRAGGTVNDYVKVGIIPWLILSTRVSKFVFRVVK
Sbjct: 121 WFWRASVATVPHHLVQPFGKFLSWRAGGTVNDYVKVGIIPWLILSTRVSKFVFRVVK 177

[Close]

BLAST of CSPI03G00270 vs. TrEMBL
Match: V4U0X4_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10016602mg PE=4 SV=1)

HSP 1 Score: 225.3 bits (573), Expect = 5.8e-56
Identity = 116/177 (65.54%), Postives = 139/177 (78.53%), Query Frame = 1


Query: 2   EPEGIVEHRSS-IAAPFIFFIVIGFQFLAKWLEHLKKRGSNSQVEMELRKSIKQLLKEAS 61
           E E + +HRSS  AAP I  +V+ FQF++KWL+ LKKRG+ S  E++LR+ IKQLLKEAS
Sbjct: 3   EEETLAQHRSSSFAAPLILLLVLAFQFVSKWLDQLKKRGARSDKEIQLRREIKQLLKEAS 62

Query: 62  TLSQPSTFAQAAKLRRLAAAKEKELANYQESRNKEIKTSYGLYSQVLLVSKVIIHIVLVC 121
           + SQPSTFAQAAKL+RLA AKEKELANYQES++KEI  SY LY +VL + KV+I+ VL+C
Sbjct: 63  SFSQPSTFAQAAKLKRLATAKEKELANYQESQSKEIHMSYDLYVKVLRILKVVIYFVLIC 122

Query: 122 WFWRASVATVPHHLVQPFGKFLSWRAGGTVNDYVKVGIIPWLILSTRVSKFVFRVVK 178
           WFWRA VA +   LVQPFGKFLSW  GG   + V VGIIPWLILSTRVSKFV  + K
Sbjct: 123 WFWRAPVAAISQQLVQPFGKFLSWWTGGQSKNNVMVGIIPWLILSTRVSKFVCGLFK 179

[Close]

BLAST of CSPI03G00270 vs. TrEMBL
Match: B9H671_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0005s10430g PE=4 SV=2)

HSP 1 Score: 222.2 bits (565), Expect = 4.9e-55
Identity = 112/168 (66.67%), Postives = 136/168 (80.95%), Query Frame = 1


Query: 10  RSSIAAPFIFFIVIGFQFLAKWLEHLKKRGSNSQVEMELRKSIKQLLKEASTLSQPSTFA 69
           R S+AAP IFFIV+ FQF++  L  LKK+GS S  E++LR  IKQLLK+AS LSQPSTFA
Sbjct: 13  RRSLAAPLIFFIVVAFQFVSIHLHQLKKKGSKSAAEIQLRAEIKQLLKDASALSQPSTFA 72

Query: 70  QAAKLRRLAAAKEKELANYQESRNKEIKTSYGLYSQVLLVSKVIIHIVLVCWFWRASVAT 129
           QAAKLRRLAAAKEKELANY+E+ +KE+K S   Y ++L +SKV+ + VL+CWFWR  VA 
Sbjct: 73  QAAKLRRLAAAKEKELANYKEAHDKEMKRSSDSYPKILFISKVVTYFVLICWFWRTPVAE 132

Query: 130 VPHHLVQPFGKFLSWRAGGTVNDYVKVGIIPWLILSTRVSKFVFRVVK 178
           +   LVQPFG+FLSWRAGG +N+ V VGIIPWLILSTRVSKFV R++K
Sbjct: 133 ISQQLVQPFGRFLSWRAGGRLNNNVMVGIIPWLILSTRVSKFVCRLIK 180

[Close]

BLAST of CSPI03G00270 vs. TrEMBL
Match: A0A061DFH9_THECC (Uncharacterized protein isoform 1 OS=Theobroma cacao GN=TCM_000069 PE=4 SV=1)

HSP 1 Score: 220.7 bits (561), Expect = 1.4e-54
Identity = 112/171 (65.50%), Postives = 137/171 (80.12%), Query Frame = 1


Query: 7   VEHRSSIAAPFIFFIVIGFQFLAKWLEHLKKRGSNSQVEMELRKSIKQLLKEASTLSQPS 66
           +E R S+AAP IFFI++ FQF  KWL+ LKK  S +  E++LR  IKQLLKEA++LSQPS
Sbjct: 7   LEQRRSLAAPLIFFIIVVFQFATKWLQDLKKGASKTDKEIQLRGEIKQLLKEAASLSQPS 66

Query: 67  TFAQAAKLRRLAAAKEKELANYQESRNKEIKTSYGLYSQVLLVSKVIIHIVLVCWFWRAS 126
           TFAQAAKLRR AAAKEKELANYQ  R+KE+K SY  Y +VL + KVII++VL+ WFWR+ 
Sbjct: 67  TFAQAAKLRRSAAAKEKELANYQAQRSKEVKLSYDWYLKVLFMLKVIIYLVLIFWFWRSP 126

Query: 127 VATVPHHLVQPFGKFLSWRAGGTVNDYVKVGIIPWLILSTRVSKFVFRVVK 178
           VA+V   LVQPFGK LSW+ GG++N+ V VGIIPWLIL TRVSKFV R++K
Sbjct: 127 VASVSQQLVQPFGKMLSWKTGGSLNNNVMVGIIPWLILCTRVSKFVCRIIK 177

[Close]

BLAST of CSPI03G00270 vs. TrEMBL
Match: R0F1Y0_9BRAS (Uncharacterized protein OS=Capsella rubella GN=CARUB_v10005861mg PE=4 SV=1)

HSP 1 Score: 215.3 bits (547), Expect = 6.0e-53
Identity = 109/177 (61.58%), Postives = 131/177 (74.01%), Query Frame = 1


Query: 1   MEPEGIVEHRSSIAAPFIFFIVIGFQFLAKWLEHLKKRGSNSQVEMELRKSIKQLLKEAS 60
           ME E ++E R  +AAP  FF+V+ FQ L+KWL+ LKK+GS +  E ELR  IKQLL+EAS
Sbjct: 1   MEGEKLIEDRGFLAAPLTFFVVVVFQLLSKWLDQLKKKGSKNTTESELRSEIKQLLREAS 60

Query: 61  TLSQPSTFAQAAKLRRLAAAKEKELANYQESRNKEIKTSYGLYSQVLLVSKVIIHIVLVC 120
            LSQP+TFAQAAKLRR AA KEKELA Y E  NKEI  SY LY + LL SKV+I+++LV 
Sbjct: 61  ALSQPATFAQAAKLRRSAATKEKELAQYLEQHNKEINLSYDLYGKALLASKVVIYLILVL 120

Query: 121 WFWRASVATVPHHLVQPFGKFLSWRAGGTVNDYVKVGIIPWLILSTRVSKFVFRVVK 178
           WFWR  +A +   LVQPFG  LSW  GG +  +V VGIIPWLILSTRVSK+V R V+
Sbjct: 121 WFWRTPIAIIAKQLVQPFGTLLSWGTGGHLTGHVLVGIIPWLILSTRVSKYVCRFVE 177

[Close]

BLAST of CSPI03G00270 vs. TAIR10
Match: AT4G16444.1 (AT4G16444.1 FUNCTIONS IN: molecular_function unknown)

HSP 1 Score: 202.6 bits (514), Expect = 2.0e-52
Identity = 105/177 (59.32%), Postives = 129/177 (72.88%), Query Frame = 1


Query: 1   MEPEGIVEHRSSIAAPFIFFIVIGFQFLAKWLEHLKKRGSNSQVEMELRKSIKQLLKEAS 60
           ME E ++E R  +AAP  F +V+ FQ L+KWL+ LKK+GS +  E ELR  IKQLL+EAS
Sbjct: 1   MEGEKLIEDRGFLAAPLTFVVVVVFQLLSKWLDQLKKKGSKNTRESELRTEIKQLLREAS 60

Query: 61  TLSQPSTFAQAAKLRRLAAAKEKELANYQESRNKEIKTSYGLYSQVLLVSKVIIHIVLVC 120
            LSQP+TFAQAAKLRR AA KEKELA Y E  +KEIK SY +Y + LL SKV+I+++LV 
Sbjct: 61  ALSQPATFAQAAKLRRSAATKEKELAQYLEQHHKEIKLSYDMYGKGLLASKVVIYLILVL 120

Query: 121 WFWRASVATVPHHLVQPFGKFLSWRAGGTVNDYVKVGIIPWLILSTRVSKFVFRVVK 178
            FWR  +A +   LVQPFG  LSW  GG +  +V VGIIPWLILS RVSK+V R V+
Sbjct: 121 CFWRTPIAIIAKQLVQPFGTLLSWGTGGHMTGHVMVGIIPWLILSNRVSKYVCRFVE 177

[Close]

BLAST of CSPI03G00270 vs. NCBI nr
Match: gi|449456879|ref|XP_004146176.1| (PREDICTED: uncharacterized protein LOC101204142 [Cucumis sativus])

HSP 1 Score: 345.1 bits (884), Expect = 7.2e-92
Identity = 177/177 (100.00%), Postives = 177/177 (100.00%), Query Frame = 1


Query: 1   MEPEGIVEHRSSIAAPFIFFIVIGFQFLAKWLEHLKKRGSNSQVEMELRKSIKQLLKEAS 60
           MEPEGIVEHRSSIAAPFIFFIVIGFQFLAKWLEHLKKRGSNSQVEMELRKSIKQLLKEAS
Sbjct: 1   MEPEGIVEHRSSIAAPFIFFIVIGFQFLAKWLEHLKKRGSNSQVEMELRKSIKQLLKEAS 60

Query: 61  TLSQPSTFAQAAKLRRLAAAKEKELANYQESRNKEIKTSYGLYSQVLLVSKVIIHIVLVC 120
           TLSQPSTFAQAAKLRRLAAAKEKELANYQESRNKEIKTSYGLYSQVLLVSKVIIHIVLVC
Sbjct: 61  TLSQPSTFAQAAKLRRLAAAKEKELANYQESRNKEIKTSYGLYSQVLLVSKVIIHIVLVC 120

Query: 121 WFWRASVATVPHHLVQPFGKFLSWRAGGTVNDYVKVGIIPWLILSTRVSKFVFRVVK 178
           WFWRASVATVPHHLVQPFGKFLSWRAGGTVNDYVKVGIIPWLILSTRVSKFVFRVVK
Sbjct: 121 WFWRASVATVPHHLVQPFGKFLSWRAGGTVNDYVKVGIIPWLILSTRVSKFVFRVVK 177

[Close]

BLAST of CSPI03G00270 vs. NCBI nr
Match: gi|659095245|ref|XP_008448478.1| (PREDICTED: tail-anchored protein insertion receptor WRB [Cucumis melo])

HSP 1 Score: 324.7 bits (831), Expect = 1.0e-85
Identity = 166/177 (93.79%), Postives = 173/177 (97.74%), Query Frame = 1


Query: 1   MEPEGIVEHRSSIAAPFIFFIVIGFQFLAKWLEHLKKRGSNSQVEMELRKSIKQLLKEAS 60
           ME EGIVEH SSIAAPFIFFIVIGFQFLA+WLEHLKK GSNSQVE+ELRKSIKQLL+EAS
Sbjct: 3   MEAEGIVEHGSSIAAPFIFFIVIGFQFLARWLEHLKKGGSNSQVELELRKSIKQLLREAS 62

Query: 61  TLSQPSTFAQAAKLRRLAAAKEKELANYQESRNKEIKTSYGLYSQVLLVSKVIIHIVLVC 120
           TLSQPSTFAQAAKLRRLAAAKEKELANYQESRNKEIKTSYGLYSQVLL+SKVII+IVLVC
Sbjct: 63  TLSQPSTFAQAAKLRRLAAAKEKELANYQESRNKEIKTSYGLYSQVLLISKVIIYIVLVC 122

Query: 121 WFWRASVATVPHHLVQPFGKFLSWRAGGTVNDYVKVGIIPWLILSTRVSKFVFRVVK 178
           WFWRASVATVPHHLVQPFGKFLSW+AGGTVNDYVKVGIIPWLILSTRVSKFV +VVK
Sbjct: 123 WFWRASVATVPHHLVQPFGKFLSWKAGGTVNDYVKVGIIPWLILSTRVSKFVCQVVK 179

[Close]

BLAST of CSPI03G00270 vs. NCBI nr
Match: gi|694388176|ref|XP_009369805.1| (PREDICTED: uncharacterized protein LOC103959180 [Pyrus x bretschneideri])

HSP 1 Score: 229.2 bits (583), Expect = 5.7e-57
Identity = 116/174 (66.67%), Postives = 135/174 (77.59%), Query Frame = 1


Query: 4   EGIVEHRSSIAAPFIFFIVIGFQFLAKWLEHLKKRGSNSQVEMELRKSIKQLLKEASTLS 63
           E +  HRSS AAP +F +V+ FQFL++WLE LKK G  +     LR  IK LLKEAS+LS
Sbjct: 6   ETLPAHRSSFAAPIVFIVVVAFQFLSRWLEQLKKGGVKNATASRLRGEIKDLLKEASSLS 65

Query: 64  QPSTFAQAAKLRRLAAAKEKELANYQESRNKEIKTSYGLYSQVLLVSKVIIHIVLVCWFW 123
           QPSTFAQAAKLRR+AAAKEKELANYQE   KEIK SY LY ++L + KV+ +IVLVCWFW
Sbjct: 66  QPSTFAQAAKLRRMAAAKEKELANYQELHGKEIKLSYDLYLRILFILKVLTYIVLVCWFW 125

Query: 124 RASVATVPHHLVQPFGKFLSWRAGGTVNDYVKVGIIPWLILSTRVSKFVFRVVK 178
           R  VA++   LVQPFGK +SWRAGG VN+ V VGIIPWLILSTRVSKFV R+ K
Sbjct: 126 RVPVASISQQLVQPFGKLISWRAGGLVNENVMVGIIPWLILSTRVSKFVCRLAK 179

[Close]

BLAST of CSPI03G00270 vs. NCBI nr
Match: gi|657948121|ref|XP_008393408.1| (PREDICTED: uncharacterized protein LOC103455607 [Malus domestica])

HSP 1 Score: 228.4 bits (581), Expect = 9.8e-57
Identity = 116/174 (66.67%), Postives = 134/174 (77.01%), Query Frame = 1


Query: 4   EGIVEHRSSIAAPFIFFIVIGFQFLAKWLEHLKKRGSNSQVEMELRKSIKQLLKEASTLS 63
           E +  HRSS AAP +F +V+ FQ L++WLE LKK G  +     LR  IK LLKEASTLS
Sbjct: 6   ETLPAHRSSFAAPIVFIVVVAFQILSRWLEQLKKGGVKNATATRLRGEIKDLLKEASTLS 65

Query: 64  QPSTFAQAAKLRRLAAAKEKELANYQESRNKEIKTSYGLYSQVLLVSKVIIHIVLVCWFW 123
           QPSTFAQAAKLRR+AAAKEKELANYQE   KEIK SY LY ++L + KV+ +IVLVCWFW
Sbjct: 66  QPSTFAQAAKLRRMAAAKEKELANYQELHGKEIKLSYDLYLRILFILKVLTYIVLVCWFW 125

Query: 124 RASVATVPHHLVQPFGKFLSWRAGGTVNDYVKVGIIPWLILSTRVSKFVFRVVK 178
           R  VA++   LVQPFGK +SWRAGG VN+ V VGIIPWLILSTRVSKFV R+ K
Sbjct: 126 RVPVASISQQLVQPFGKLISWRAGGIVNENVMVGIIPWLILSTRVSKFVCRLAK 179

[Close]

BLAST of CSPI03G00270 vs. NCBI nr
Match: gi|657947941|ref|XP_008392451.1| (PREDICTED: uncharacterized protein LOC103454631 isoform X1 [Malus domestica])

HSP 1 Score: 226.5 bits (576), Expect = 3.7e-56
Identity = 114/174 (65.52%), Postives = 134/174 (77.01%), Query Frame = 1


Query: 4   EGIVEHRSSIAAPFIFFIVIGFQFLAKWLEHLKKRGSNSQVEMELRKSIKQLLKEASTLS 63
           E +  HR+S AAP +F +V+ FQFL++WLE LKK G  +     LR  IK LLKEAS+LS
Sbjct: 6   ETLSAHRNSFAAPAVFIVVVAFQFLSRWLEQLKKGGVKNATATRLRGEIKDLLKEASSLS 65

Query: 64  QPSTFAQAAKLRRLAAAKEKELANYQESRNKEIKTSYGLYSQVLLVSKVIIHIVLVCWFW 123
           QPSTFAQAAKLRR+AAAKEKELANYQE   KE K SY LY ++L + KV+ +IVLVCWFW
Sbjct: 66  QPSTFAQAAKLRRMAAAKEKELANYQELHGKETKLSYDLYQRILFILKVLTYIVLVCWFW 125

Query: 124 RASVATVPHHLVQPFGKFLSWRAGGTVNDYVKVGIIPWLILSTRVSKFVFRVVK 178
           R  VA++   LVQPFGK +SWRAGG VN+ V VGIIPWLILSTRVSKFV R+ K
Sbjct: 126 RVPVASISQQLVQPFGKLISWRAGGVVNENVMVGIIPWLILSTRVSKFVCRLAK 179

The following BLAST results are available for this feature:

BLAST of CSPI03G00270 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CSPI03G00270 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L4T9_CUCSA	5.0e-92	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G002280 PE=4 SV=1	[more]
V4U0X4_9ROSI	5.8e-56	65.54	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10016602mg PE=4 SV=1	[more]
B9H671_POPTR	4.9e-55	66.67	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0005s10430g PE=4 SV=2	[more]
A0A061DFH9_THECC	1.4e-54	65.50	Uncharacterized protein isoform 1 OS=Theobroma cacao GN=TCM_000069 PE=4 SV=1	[more]
R0F1Y0_9BRAS	6.0e-53	61.58	Uncharacterized protein OS=Capsella rubella GN=CARUB_v10005861mg PE=4 SV=1	[more]

BLAST of CSPI03G00270 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G16444.1	2.0e-52	59.32	FUNCTIONS IN: molecular_function unknown	[more]

BLAST of CSPI03G00270 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449456879\|ref\|XP_004146176.1\|	7.2e-92	100.00	PREDICTED: uncharacterized protein LOC101204142 [Cucumis sativus]	[more]
gi\|659095245\|ref\|XP_008448478.1\|	1.0e-85	93.79	PREDICTED: tail-anchored protein insertion receptor WRB [Cucumis melo]	[more]
gi\|694388176\|ref\|XP_009369805.1\|	5.7e-57	66.67	PREDICTED: uncharacterized protein LOC103959180 [Pyrus x bretschneideri]	[more]
gi\|657948121\|ref\|XP_008393408.1\|	9.8e-57	66.67	PREDICTED: uncharacterized protein LOC103455607 [Malus domestica]	[more]
gi\|657947941\|ref\|XP_008392451.1\|	3.7e-56	65.52	PREDICTED: uncharacterized protein LOC103454631 isoform X1 [Malus domestica]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

Vocabulary: **Biological Process**
Term	Definition
GO:0071816	tail-anchored membrane protein insertion into ER membrane

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0071816	tail-anchored membrane protein insertion into ER membrane
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI03G00270.1	CSPI03G00270.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	unknown	Coil	Coil	coord: 71..94 scor
None	No IPR available	PANTHER	PTHR11760	30S/40S RIBOSOMAL PROTEIN S3	coord: 45..176 score: 2.6
None	No IPR available	PANTHER	PTHR11760:SF21	TAIL-ANCHORED PROTEIN INSERTION RECEPTOR WRB	coord: 45..176 score: 2.6

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CSPI03G00270	Cla008945	Watermelon (97103) v1	cpiwmB200
CSPI03G00270	Csa3G002280	Cucumber (Chinese Long) v2	cpicuB120
CSPI03G00270	MELO3C013722	Melon (DHL92) v3.5.1	cpimeB240
CSPI03G00270	ClCG10G000250	Watermelon (Charleston Gray)	cpiwcgB190
CSPI03G00270	Lsi07G010530	Bottle gourd (USVL1VR-Ls)	cpilsiB227
CSPI03G00270	MELO3C013722.2	Melon (DHL92) v3.6.1	cpimedB225
CSPI03G00270	CsaV3_3G000280	Cucumber (Chinese Long) v3	cpicucB144
CSPI03G00270	Cla97C10G184780	Watermelon (97103) v2	cpiwmbB184
CSPI03G00270	Bhi11G000218	Wax gourd	cpiwgoB226
CSPI03G00270	Cucsa.323110	Cucumber (Gy14) v1	cgycpiB484
CSPI03G00270	CmaCh06G001580	Cucurbita maxima (Rimu)	cmacpiB840
CSPI03G00270	CmaCh16G012760	Cucurbita maxima (Rimu)	cmacpiB332
CSPI03G00270	CmoCh16G013270	Cucurbita moschata (Rifu)	cmocpiB323
CSPI03G00270	CmoCh06G001490	Cucurbita moschata (Rifu)	cmocpiB825
CSPI03G00270	Cp4.1LG08g12840	Cucurbita pepo (Zucchini)	cpecpiB853
CSPI03G00270	Cp4.1LG14g10460	Cucurbita pepo (Zucchini)	cpecpiB215
CSPI03G00270	Carg19437	Silver-seed gourd	carcpiB0467
CSPI03G00270	Carg01177	Silver-seed gourd	carcpiB0179

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CSPI03G00270	Wild cucumber (PI 183967)	cpicpiB133
CSPI03G00270	Cucumber (Gy14) v1	cgycpiB025
CSPI03G00270	Cucurbita maxima (Rimu)	cmacpiB666
CSPI03G00270	Cucurbita maxima (Rimu)	cmacpiB871
CSPI03G00270	Cucurbita moschata (Rifu)	cmocpiB658
CSPI03G00270	Cucurbita moschata (Rifu)	cmocpiB852
CSPI03G00270	Cucumber (Chinese Long) v2	cpicuB156
CSPI03G00270	Melon (DHL92) v3.5.1	cpimeB258
CSPI03G00270	Watermelon (Charleston Gray)	cpiwcgB212
CSPI03G00270	Watermelon (97103) v1	cpiwmB262
CSPI03G00270	Cucurbita pepo (Zucchini)	cpecpiB064
CSPI03G00270	Cucurbita pepo (Zucchini)	cpecpiB485
CSPI03G00270	Cucurbita pepo (Zucchini)	cpecpiB557
CSPI03G00270	Bottle gourd (USVL1VR-Ls)	cpilsiB164
CSPI03G00270	Melon (DHL92) v3.6.1	cpimedB254
CSPI03G00270	Cucumber (Gy14) v2	cgybcpiB110
CSPI03G00270	Cucumber (Gy14) v2	cgybcpiB272
CSPI03G00270	Silver-seed gourd	carcpiB0441
CSPI03G00270	Silver-seed gourd	carcpiB0671
CSPI03G00270	Cucumber (Chinese Long) v3	cpicucB184
CSPI03G00270	Watermelon (97103) v2	cpiwmbB182
CSPI03G00270	Wax gourd	cpiwgoB329