Carg00735 (gene) Silver-seed gourd

Overview
NameCarg00735
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionTetratricopeptide repeat-containing domain
LocationCucurbita_argyrosperma_scaffold_014 : 1194877 .. 1195512 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATGTCGCCGGAAGCCATGATACAAGTAGCCCTCTTCATTCTCACAGCAGCGACGATGTTAGCCGTACGAGAACTTTCCAAGCGAGCTTTCGGCAAGGTCCGCCTGAAGAACAGAGCGATCCTCCAATCCAGTCGCCACTTCCTCGAGGGAACTCATCTACTCGCTCGAGCACGATCTACTTCTCAACAATCTCAATCGATGGACTACGCGAAGAAGGCACTAAACGAGGCCGAAACGGCGCTCTCGCTTTCGCCTAGAGATCCGGCATCGCACATCTTGAAAGCCCTAGCCTTAAATCACATGGGTCACCACAGCTCCGCACTTAAATCTCTCGACGTCGCACTTTCGCCGCCGTGCTTGAAGTCATTATCCGAAAAAGAGGTCGCTAAGGCGTTGGTCAAGAGAGCCGAATTGAAAATAGCCGTCAATCGGAAACGACGACTCGACTCGGCGGTGGAAGACTTGCTGCAGGCGGTGAGTTTGGGCGGAGATGACACGAAGGCCTTCTGTTTGTTGGGCCAATGTTACGAATGGAAGAAAATGAAAGATGAGGCCAGACAGGCTTTTGAGAAGGCCTTAACTGTAGATCCTGAATCAGCCCCGGCTCGCGAGGCATTGGGCCGACTGAATTAA

mRNA sequence

ATGATGTCGCCGGAAGCCATGATACAAGTAGCCCTCTTCATTCTCACAGCAGCGACGATGTTAGCCGTACGAGAACTTTCCAAGCGAGCTTTCGGCAAGGTCCGCCTGAAGAACAGAGCGATCCTCCAATCCAGTCGCCACTTCCTCGAGGGAACTCATCTACTCGCTCGAGCACGATCTACTTCTCAACAATCTCAATCGATGGACTACGCGAAGAAGGCACTAAACGAGGCCGAAACGGCGCTCTCGCTTTCGCCTAGAGATCCGGCATCGCACATCTTGAAAGCCCTAGCCTTAAATCACATGGGTCACCACAGCTCCGCACTTAAATCTCTCGACGTCGCACTTTCGCCGCCGTGCTTGAAGTCATTATCCGAAAAAGAGGTCGCTAAGGCGTTGGTCAAGAGAGCCGAATTGAAAATAGCCGTCAATCGGAAACGACGACTCGACTCGGCGGTGGAAGACTTGCTGCAGGCGGTGAGTTTGGGCGGAGATGACACGAAGGCCTTCTGTTTGTTGGGCCAATGTTACGAATGGAAGAAAATGAAAGATGAGGCCAGACAGGCTTTTGAGAAGGCCTTAACTGTAGATCCTGAATCAGCCCCGGCTCGCGAGGCATTGGGCCGACTGAATTAA

Coding sequence (CDS)

ATGATGTCGCCGGAAGCCATGATACAAGTAGCCCTCTTCATTCTCACAGCAGCGACGATGTTAGCCGTACGAGAACTTTCCAAGCGAGCTTTCGGCAAGGTCCGCCTGAAGAACAGAGCGATCCTCCAATCCAGTCGCCACTTCCTCGAGGGAACTCATCTACTCGCTCGAGCACGATCTACTTCTCAACAATCTCAATCGATGGACTACGCGAAGAAGGCACTAAACGAGGCCGAAACGGCGCTCTCGCTTTCGCCTAGAGATCCGGCATCGCACATCTTGAAAGCCCTAGCCTTAAATCACATGGGTCACCACAGCTCCGCACTTAAATCTCTCGACGTCGCACTTTCGCCGCCGTGCTTGAAGTCATTATCCGAAAAAGAGGTCGCTAAGGCGTTGGTCAAGAGAGCCGAATTGAAAATAGCCGTCAATCGGAAACGACGACTCGACTCGGCGGTGGAAGACTTGCTGCAGGCGGTGAGTTTGGGCGGAGATGACACGAAGGCCTTCTGTTTGTTGGGCCAATGTTACGAATGGAAGAAAATGAAAGATGAGGCCAGACAGGCTTTTGAGAAGGCCTTAACTGTAGATCCTGAATCAGCCCCGGCTCGCGAGGCATTGGGCCGACTGAATTAA

Protein sequence

MMSPEAMIQVALFILTAATMLAVRELSKRAFGKVRLKNRAILQSSRHFLEGTHLLARARSTSQQSQSMDYAKKALNEAETALSLSPRDPASHILKALALNHMGHHSSALKSLDVALSPPCLKSLSEKEVAKALVKRAELKIAVNRKRRLDSAVEDLLQAVSLGGDDTKAFCLLGQCYEWKKMKDEARQAFEKALTVDPESAPAREALGRLN
Homology
[Close]
BLAST of Carg00735 vs. NCBI nr
Match: XP_022950520.1 (uncharacterized protein LOC111453603 [Cucurbita moschata])

HSP 1 Score: 390.6 bits (1002), Expect = 3.4e-105
Identity = 211/211 (100.00%), Postives = 211/211 (100.00%), Query Frame = 0 

Query: 1   MMSPEAMIQVALFILTAATMLAVRELSKRAFGKVRLKNRAILQSSRHFLEGTHLLARARS 60
           MMSPEAMIQVALFILTAATMLAVRELSKRAFGKVRLKNRAILQSSRHFLEGTHLLARARS
Sbjct: 1   MMSPEAMIQVALFILTAATMLAVRELSKRAFGKVRLKNRAILQSSRHFLEGTHLLARARS 60

Query: 61  TSQQSQSMDYAKKALNEAETALSLSPRDPASHILKALALNHMGHHSSALKSLDVALSPPC 120
           TSQQSQSMDYAKKALNEAETALSLSPRDPASHILKALALNHMGHHSSALKSLDVALSPPC
Sbjct: 61  TSQQSQSMDYAKKALNEAETALSLSPRDPASHILKALALNHMGHHSSALKSLDVALSPPC 120

Query: 121 LKSLSEKEVAKALVKRAELKIAVNRKRRLDSAVEDLLQAVSLGGDDTKAFCLLGQCYEWK 180
           LKSLSEKEVAKALVKRAELKIAVNRKRRLDSAVEDLLQAVSLGGDDTKAFCLLGQCYEWK
Sbjct: 121 LKSLSEKEVAKALVKRAELKIAVNRKRRLDSAVEDLLQAVSLGGDDTKAFCLLGQCYEWK 180

Query: 181 KMKDEARQAFEKALTVDPESAPAREALGRLN 212
           KMKDEARQAFEKALTVDPESAPAREALGRLN
Sbjct: 181 KMKDEARQAFEKALTVDPESAPAREALGRLN 211

[Close]
BLAST of Carg00735 vs. NCBI nr
Match: XP_022978825.1 (uncharacterized protein LOC111478668 [Cucurbita maxima])

HSP 1 Score: 385.2 bits (988), Expect = 1.4e-103
Identity = 207/211 (98.10%), Postives = 210/211 (99.53%), Query Frame = 0 

Query: 1   MMSPEAMIQVALFILTAATMLAVRELSKRAFGKVRLKNRAILQSSRHFLEGTHLLARARS 60
           MMSPEA+IQVALFILTAATMLAVRELSKRAFGKVRLKNRAILQSSRHFLEGTHLLARARS
Sbjct: 1   MMSPEAVIQVALFILTAATMLAVRELSKRAFGKVRLKNRAILQSSRHFLEGTHLLARARS 60

Query: 61  TSQQSQSMDYAKKALNEAETALSLSPRDPASHILKALALNHMGHHSSALKSLDVALSPPC 120
            SQQSQSMDYAKKA+NEAETALSLSPRDPASHILKALALNHMGHHSSALKSLD+ALSPPC
Sbjct: 61  ISQQSQSMDYAKKAVNEAETALSLSPRDPASHILKALALNHMGHHSSALKSLDIALSPPC 120

Query: 121 LKSLSEKEVAKALVKRAELKIAVNRKRRLDSAVEDLLQAVSLGGDDTKAFCLLGQCYEWK 180
           LKSLSEKEVAKALVKRAELKIAVNRKRRLDSAVEDLLQAVSLGGDDTKAFCLLGQCYEWK
Sbjct: 121 LKSLSEKEVAKALVKRAELKIAVNRKRRLDSAVEDLLQAVSLGGDDTKAFCLLGQCYEWK 180

Query: 181 KMKDEARQAFEKALTVDPESAPAREALGRLN 212
           KMKDEARQAFEKALTVDPESAPAREALGRLN
Sbjct: 181 KMKDEARQAFEKALTVDPESAPAREALGRLN 211

[Close]
BLAST of Carg00735 vs. NCBI nr
Match: XP_023543662.1 (uncharacterized protein LOC111803474 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 384.8 bits (987), Expect = 1.9e-103
Identity = 208/211 (98.58%), Postives = 210/211 (99.53%), Query Frame = 0 

Query: 1   MMSPEAMIQVALFILTAATMLAVRELSKRAFGKVRLKNRAILQSSRHFLEGTHLLARARS 60
           M+SPEAMIQVALFILTAATMLAVRELSKRAFGKVRLKNRAILQSSRHFLEGTHLLARARS
Sbjct: 1   MVSPEAMIQVALFILTAATMLAVRELSKRAFGKVRLKNRAILQSSRHFLEGTHLLARARS 60

Query: 61  TSQQSQSMDYAKKALNEAETALSLSPRDPASHILKALALNHMGHHSSALKSLDVALSPPC 120
           TSQQSQSMDYAKKALNEAETALSLSPRDPASHILKALALNHMGH SSALKSLDVALSPPC
Sbjct: 61  TSQQSQSMDYAKKALNEAETALSLSPRDPASHILKALALNHMGHQSSALKSLDVALSPPC 120

Query: 121 LKSLSEKEVAKALVKRAELKIAVNRKRRLDSAVEDLLQAVSLGGDDTKAFCLLGQCYEWK 180
           LKSLSEKEVAKALVKRAELKIAVNRKRRLDSAVEDLLQAVSLGGDDTKAFCLLGQCYEWK
Sbjct: 121 LKSLSEKEVAKALVKRAELKIAVNRKRRLDSAVEDLLQAVSLGGDDTKAFCLLGQCYEWK 180

Query: 181 KMKDEARQAFEKALTVDPESAPAREALGRLN 212
           KMKDEAR+AFEKALTVDPESAPAREALGRLN
Sbjct: 181 KMKDEAREAFEKALTVDPESAPAREALGRLN 211

[Close]
BLAST of Carg00735 vs. NCBI nr
Match: XP_022132455.1 (uncharacterized protein LOC111005306 [Momordica charantia])

HSP 1 Score: 345.1 bits (884), Expect = 1.7e-91
Identity = 186/210 (88.57%), Postives = 196/210 (93.33%), Query Frame = 0 

Query: 2   MSPEAMIQVALFILTAATMLAVRELSKRAFGKVRLKNRAILQSSRHFLEGTHLLARARST 61
           MSPEAMIQVALFILTAAT+LAVRELSKRAFGKVR KNRAILQSSRHF EGTHLLARARST
Sbjct: 1   MSPEAMIQVALFILTAATLLAVRELSKRAFGKVRPKNRAILQSSRHFFEGTHLLARARST 60

Query: 62  SQQSQSMDYAKKALNEAETALSLSPRDPASHILKALALNHMGHHSSALKSLDVALSPPCL 121
           SQQSQS DYAKKAL EAETALSLSP+DPASHILKALAL+HMGH SSALKSLDVALSPPCL
Sbjct: 61  SQQSQSFDYAKKALTEAETALSLSPKDPASHILKALALDHMGHQSSALKSLDVALSPPCL 120

Query: 122 KSLSEKEVAKALVKRAELKIAVNRKRRLDSAVEDLLQAVSLGGDDTKAFCLLGQCYEWKK 181
           KSLS +E+ KAL+KRAELKIAVNRKRRLDSAVEDLL+AV LG  D K FCLLGQCYEWK+
Sbjct: 121 KSLSGRELGKALIKRAELKIAVNRKRRLDSAVEDLLEAVRLGVQDPKGFCLLGQCYEWKQ 180

Query: 182 MKDEARQAFEKALTVDPESAPAREALGRLN 212
           MKDEA+QAFEKALTVDPES+PARE L RLN
Sbjct: 181 MKDEAKQAFEKALTVDPESSPAREGLERLN 210

[Close]
BLAST of Carg00735 vs. NCBI nr
Match: XP_008236271.1 (PREDICTED: uncharacterized protein LOC103335053 [Prunus mume])

HSP 1 Score: 248.8 bits (634), Expect = 1.6e-62
Identity = 133/212 (62.74%), Postives = 168/212 (79.25%), Query Frame = 0 

Query: 2   MSPEAMIQVALFILTAATMLAVRELSKRAFGKVRLKNRAILQSSRHFLEGTHLLARARST 61
           M+PE ++Q+ L ILT A   A+ ++S++A  K+R  NRA LQS+RHF++G+HLL RARS 
Sbjct: 1   MAPEVVLQLGLLILTLAMFFAIHKISRKALTKLRTNNRANLQSTRHFVQGSHLLTRARSN 60

Query: 62  SQQSQSMDYAKKALNEAETALSLSPRDPASHILKALALNHMGHHSSALKSLDVALSPPCL 121
             ++QS  +AK AL EAE AL+LSPRDP  HILKALAL+ +GH +SALKS DVALSPPC+
Sbjct: 61  PHKAQSQAHAKNALTEAEKALALSPRDPGPHILKALALDLLGHKTSALKSFDVALSPPCV 120

Query: 122 KSLSEKEVAKALVKRAELKIAVNRKRRLDSAVEDLLQAVSLG---GDDTKAFCLLGQCYE 181
           KSLSE+E  +ALVKRAELKI +NR+RR+DSAVEDL+QAV L    GDD  +FCLLGQCYE
Sbjct: 121 KSLSERERGEALVKRAELKIGLNRRRRVDSAVEDLVQAVRLSRGEGDDVTSFCLLGQCYE 180

Query: 182 WKKMKDEARQAFEKALTVDPESAPAREALGRL 211
           WK+MK+EAR+AFE+AL  +P S  AR+ L RL
Sbjct: 181 WKEMKEEAREAFERALRAEPGSVLARQGLDRL 212

[Close]
BLAST of Carg00735 vs. TAIR10
Match: AT5G65520.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 183.3 bits (464), Expect = 1.5e-46
Identity = 106/202 (52.48%), Postives = 145/202 (71.78%), Query Frame = 0 

Query: 1   MMSPEAMIQVALFILTAATMLAVRELSKRAFGKVRLKNRAILQSSRHFLEGTHLLARARS 60
           M + E +IQ A+ +LT     A++ LS+R   K R K+RA LQ+ R  ++ + LLARAR+
Sbjct: 1   MATTETIIQGAILVLTLVMFWAIKYLSQRGLTKFRTKHRATLQTQRQLIQASRLLARART 60

Query: 61  TSQQSQSMDYAKKALNEAETALSLSPRDPASHILKALALNHMGHHSSALKSLDVALSPPC 120
           T ++SQS   AK AL EA+  +++SP D A HI++ALAL+ +GHH+SALKS D+AL+ P 
Sbjct: 61  TPKKSQSQSLAKTALTEADNVIAISPDDAAGHIVRALALDLLGHHTSALKSFDMALTYPR 120

Query: 121 LKSLSEKEVAKALVKRAELKIAVNRKRRLDSAVEDLLQAVSL--GGDDTKAFCLLGQCYE 180
           LKSLS  E A ALVKRAE+K+AVNR+RR+DSAVEDL +AV L  G D  + F LLG+CYE
Sbjct: 121 LKSLSVGERADALVKRAEMKLAVNRRRRIDSAVEDLEEAVRLAAGTDTARLFRLLGECYE 180

Query: 181 WKKMKDEARQAFEKALTVDPES 201
           +K +K++A+ AF +AL   P S
Sbjct: 181 FKGLKEKAQWAFNEALKAQPSS 202

[Close]
BLAST of Carg00735 vs. TrEMBL
Match: tr|A0A251NVU0|A0A251NVU0_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_6G203100 PE=4 SV=1)

HSP 1 Score: 247.7 bits (631), Expect = 2.4e-62
Identity = 133/212 (62.74%), Postives = 167/212 (78.77%), Query Frame = 0 

Query: 2   MSPEAMIQVALFILTAATMLAVRELSKRAFGKVRLKNRAILQSSRHFLEGTHLLARARST 61
           M+PE ++Q+ L ILT A   A+ ++S++A  K+R  NRA LQS+RHF++G+HLL RARS 
Sbjct: 1   MAPEVVLQLGLLILTLAMFFAIHKISRKALTKLRTNNRANLQSTRHFVQGSHLLTRARSN 60

Query: 62  SQQSQSMDYAKKALNEAETALSLSPRDPASHILKALALNHMGHHSSALKSLDVALSPPCL 121
             ++QS  +AK AL EAE AL+LSPRDP  HILKALAL+ +GH +SALKS DVALSPPC+
Sbjct: 61  PHKAQSQAHAKNALTEAEKALALSPRDPGPHILKALALDLLGHKTSALKSFDVALSPPCV 120

Query: 122 KSLSEKEVAKALVKRAELKIAVNRKRRLDSAVEDLLQAVSLG---GDDTKAFCLLGQCYE 181
           KSLSE+E  +ALVKRAELKI +NR+RR+DSAVEDL+QAV L    GDD  +FCLLGQCYE
Sbjct: 121 KSLSERERGEALVKRAELKIGLNRRRRVDSAVEDLVQAVRLSRGEGDDVTSFCLLGQCYE 180

Query: 182 WKKMKDEARQAFEKALTVDPESAPAREALGRL 211
           WK MK+EAR+AFE+AL  +P S  AR+ L RL
Sbjct: 181 WKGMKEEAREAFERALRAEPGSVLARQGLDRL 212

[Close]
BLAST of Carg00735 vs. TrEMBL
Match: tr|A0A2P6RPV8|A0A2P6RPV8_ROSCH (Putative tetratricopeptide-like helical domain-containing protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr2g0111021 PE=4 SV=1)

HSP 1 Score: 243.8 bits (621), Expect = 3.4e-61
Identity = 135/211 (63.98%), Postives = 169/211 (80.09%), Query Frame = 0 

Query: 2   MSPEAMIQVALFILTAATMLAVRELSKRAFGKVRLKNRAILQSSRHFLEGTHLLARARST 61
           M+ E ++QVAL ILT A   A+ +LSK+A  K+R  NRA LQ++RHF+ G+ LL RARST
Sbjct: 1   MAAEVVLQVALLILTLAIFFAIHKLSKQALTKLRTNNRATLQATRHFVLGSQLLTRARST 60

Query: 62  SQQSQSMDYAKKALNEAETALSLSPRDPASHILKALALNHMGHHSSALKSLDVALSPPCL 121
             ++QS  +AK AL EAE ALSLSPRDP  HILKALAL+ +GH +SAL+SLD ALSPPC+
Sbjct: 61  PHKTQSHSHAKSALTEAEKALSLSPRDPGPHILKALALDLLGHRTSALRSLDAALSPPCV 120

Query: 122 KSLSEKEVAKALVKRAELKIAVNRKRRLDSAVEDLLQAVSL--GGDDTKAFCLLGQCYEW 181
           KSL+++E  +ALVKRAELK+A+NR+RR+DSAVEDL++AV L  G DDT AFCLLGQCYE 
Sbjct: 121 KSLADRERGEALVKRAELKLALNRRRRVDSAVEDLVEAVGLSSGEDDTTAFCLLGQCYER 180

Query: 182 KKMKDEARQAFEKALTVDPESAPAREALGRL 211
           K M+DEAR+AFE+ALT+D  SA AR+ L RL
Sbjct: 181 KGMRDEAREAFERALTMDSGSALARQGLDRL 211

[Close]
BLAST of Carg00735 vs. TrEMBL
Match: tr|A0A2N9EF42|A0A2N9EF42_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS1264 PE=4 SV=1)

HSP 1 Score: 228.8 bits (582), Expect = 1.1e-56
Identity = 124/210 (59.05%), Postives = 164/210 (78.10%), Query Frame = 0 

Query: 2   MSPEAMIQVALFILTAATMLAVRELSKRAFGKVRLKNRAILQSSRHFLEGTHLLARARST 61
           M+PE ++Q+A+  L  A  +A+++L + A  K+R K+RA LQ++RHF+ G+HLLARARST
Sbjct: 1   MAPEIVVQLAILTLALAMFIAIQKLPREALTKLRTKHRATLQTNRHFVHGSHLLARARST 60

Query: 62  SQQSQSMDYAKKALNEAETALSLSPRDPASHILKALALNHMGHHSSALKSLDVALSPPCL 121
           + ++QS  +AK AL EAE ALSLSP+DPA  +LKALAL+ MGH  SALKSLD+ALSPP +
Sbjct: 61  NHRTQSQAHAKSALIEAEKALSLSPKDPAPQLLKALALDLMGHKVSALKSLDLALSPPRV 120

Query: 122 KSLSEKEVAKALVKRAELKIAVNRKRRLDSAVEDLLQAVSLGG--DDTKAFCLLGQCYEW 181
           +SLSE E   ALVKRAELK+A+NR+RR+DSAV+DL++AV L G  D   AFCLLG+CYEW
Sbjct: 121 RSLSESERGDALVKRAELKLAMNRRRRVDSAVDDLVEAVKLSGMNDKATAFCLLGECYEW 180

Query: 182 KKMKDEARQAFEKALTVDPESAPAREALGR 210
           K M+ EAR+AF++AL V+P S  AR+   R
Sbjct: 181 KGMRQEAREAFQEALRVEPGSVAARQGFDR 210

[Close]
BLAST of Carg00735 vs. TrEMBL
Match: tr|A0A2I4ELF1|A0A2I4ELF1_9ROSI (uncharacterized protein LOC108990655 isoform X2 OS=Juglans regia OX=51240 GN=LOC108990655 PE=4 SV=1)

HSP 1 Score: 224.9 bits (572), Expect = 1.6e-55
Identity = 124/211 (58.77%), Postives = 163/211 (77.25%), Query Frame = 0 

Query: 2   MSPEAMIQVALFILTAATMLAVRELSKRAFGKVRLKNRAILQSSRHFLEGTHLLARARST 61
           M+PE ++Q+AL  L  A   A+  L K A  K+R K+RA L S+RHF++G+HLL RARST
Sbjct: 1   MAPEIVLQLALLTLALAMFFAIHRLPKGALTKLRTKHRATLLSNRHFVQGSHLLDRARST 60

Query: 62  SQQSQSMDYAKKALNEAETALSLSPRDPASHILKALALNHMGHHSSALKSLDVALSPPCL 121
             + QS+ +AK AL EAE A+SLSP+DPA HILKA+AL+ +GH +SAL+SLD+ALS P +
Sbjct: 61  PHRIQSLTHAKSALLEAEKAVSLSPKDPAPHILKAMALDLLGHKTSALRSLDLALSSPRV 120

Query: 122 KSLSEKEVAKALVKRAELKIAVNRKRRLDSAVEDLLQAVSLGGD-DTKAFCLLGQCYEWK 181
           +S+  KE   ALVKRAELK+ +NRKRR+DSAVEDL++AV L G+ +T+A+CLLG+CYEWK
Sbjct: 121 RSIVGKERGDALVKRAELKLGMNRKRRVDSAVEDLVEAVRLSGNSNTRAYCLLGECYEWK 180

Query: 182 KMKDEARQAFEKALTVDPESAPAREALGRLN 212
             K+EAR+AFE AL V P+S  AR AL RL+
Sbjct: 181 GRKEEAREAFENALRVQPDSVAARHALDRLS 211

[Close]
BLAST of Carg00735 vs. TrEMBL
Match: tr|A0A2I4ELF5|A0A2I4ELF5_9ROSI (uncharacterized protein LOC108990655 isoform X3 OS=Juglans regia OX=51240 GN=LOC108990655 PE=4 SV=1)

HSP 1 Score: 224.9 bits (572), Expect = 1.6e-55
Identity = 124/211 (58.77%), Postives = 163/211 (77.25%), Query Frame = 0 

Query: 2   MSPEAMIQVALFILTAATMLAVRELSKRAFGKVRLKNRAILQSSRHFLEGTHLLARARST 61
           M+PE ++Q+AL  L  A   A+  L K A  K+R K+RA L S+RHF++G+HLL RARST
Sbjct: 1   MAPEIVLQLALLTLALAMFFAIHRLPKGALTKLRTKHRATLLSNRHFVQGSHLLDRARST 60

Query: 62  SQQSQSMDYAKKALNEAETALSLSPRDPASHILKALALNHMGHHSSALKSLDVALSPPCL 121
             + QS+ +AK AL EAE A+SLSP+DPA HILKA+AL+ +GH +SAL+SLD+ALS P +
Sbjct: 61  PHRIQSLTHAKSALLEAEKAVSLSPKDPAPHILKAMALDLLGHKTSALRSLDLALSSPRV 120

Query: 122 KSLSEKEVAKALVKRAELKIAVNRKRRLDSAVEDLLQAVSLGGD-DTKAFCLLGQCYEWK 181
           +S+  KE   ALVKRAELK+ +NRKRR+DSAVEDL++AV L G+ +T+A+CLLG+CYEWK
Sbjct: 121 RSIVGKERGDALVKRAELKLGMNRKRRVDSAVEDLVEAVRLSGNSNTRAYCLLGECYEWK 180

Query: 182 KMKDEARQAFEKALTVDPESAPAREALGRLN 212
             K+EAR+AFE AL V P+S  AR AL RL+
Sbjct: 181 GRKEEAREAFENALRVQPDSVAARHALDRLS 211

The following BLAST results are available for this feature:
BLAST of Carg00735 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022950520.13.4e-105100.00uncharacterized protein LOC111453603 [Cucurbita moschata][more]
XP_022978825.11.4e-10398.10uncharacterized protein LOC111478668 [Cucurbita maxima][more]
XP_023543662.11.9e-10398.58uncharacterized protein LOC111803474 [Cucurbita pepo subsp. pepo][more]
XP_022132455.11.7e-9188.57uncharacterized protein LOC111005306 [Momordica charantia][more]
XP_008236271.11.6e-6262.74PREDICTED: uncharacterized protein LOC103335053 [Prunus mume][more]
BLAST of Carg00735 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G65520.11.5e-4652.48Tetratricopeptide repeat (TPR)-like superfamily protein[more]
BLAST of Carg00735 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Carg00735 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A251NVU0|A0A251NVU0_PRUPE2.4e-6262.74Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_6G203100 PE=4 SV=1[more]
tr|A0A2P6RPV8|A0A2P6RPV8_ROSCH3.4e-6163.98Putative tetratricopeptide-like helical domain-containing protein OS=Rosa chinen... [more]
tr|A0A2N9EF42|A0A2N9EF42_FAGSY1.1e-5659.05Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS1264 PE=4 SV=1[more]
tr|A0A2I4ELF1|A0A2I4ELF1_9ROSI1.6e-5558.77uncharacterized protein LOC108990655 isoform X2 OS=Juglans regia OX=51240 GN=LOC... [more]
tr|A0A2I4ELF5|A0A2I4ELF5_9ROSI1.6e-5558.77uncharacterized protein LOC108990655 isoform X3 OS=Juglans regia OX=51240 GN=LOC... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR013026TPR-contain_dom
IPR001440TPR_1
IPR011990TPR-like_helical_dom_sf
IPR019734TPR_repeat
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg00735-RACarg00735-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019734Tetratricopeptide repeatSMARTSM00028tpr_5coord: 167..200
e-value: 5.7E-6
score: 35.8
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 167..200
score: 10.738
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3DG3DSA:1.25.40.10coord: 16..141
e-value: 2.8E-7
score: 32.5
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3DG3DSA:1.25.40.10coord: 142..211
e-value: 8.4E-12
score: 47.1
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILYSSF48452TPR-likecoord: 71..208
IPR001440Tetratricopeptide repeat 1PFAMPF00515TPR_1coord: 168..199
e-value: 1.3E-7
score: 31.1
NoneNo IPR availablePANTHERPTHR26312FAMILY NOT NAMEDcoord: 2..211
NoneNo IPR availablePANTHERPTHR26312:SF112SUBFAMILY NOT NAMEDcoord: 2..211
IPR013026Tetratricopeptide repeat-containing domainPROSITEPS50293TPR_REGIONcoord: 130..211
score: 13.0

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Carg00735MELO3C011082Melon (DHL92) v3.5.1carmeB0405
Carg00735CmaCh12G002040Cucurbita maxima (Rimu)carcmaB0556
Carg00735CmoCh12G001580Cucurbita moschata (Rifu)carcmoB0544
Carg00735Cp4.1LG07g01710Cucurbita pepo (Zucchini)carcpeB0571
Carg00735MELO3C011082.2Melon (DHL92) v3.6.1carmedB0409
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Carg00735Silver-seed gourdcarcarB064
Carg00735Silver-seed gourdcarcarB001
Carg00735Silver-seed gourdcarcarB424
Carg00735Silver-seed gourdcarcarB431
Carg00735Cucumber (Gy14) v2carcgybB0410
Carg00735Cucumber (Gy14) v2carcgybB0414
Carg00735Cucumber (Gy14) v2carcgybB0418
Carg00735Cucumber (Gy14) v1carcgyB0471
Carg00735Cucumber (Gy14) v1carcgyB0467
Carg00735Cucumber (Gy14) v1carcgyB0469
Carg00735Cucurbita maxima (Rimu)carcmaB0558
Carg00735Cucurbita maxima (Rimu)carcmaB0567
Carg00735Cucurbita maxima (Rimu)carcmaB0568
Carg00735Cucurbita maxima (Rimu)carcmaB0571
Carg00735Cucurbita moschata (Rifu)carcmoB0540
Carg00735Cucurbita moschata (Rifu)carcmoB0551
Carg00735Cucurbita moschata (Rifu)carcmoB0552
Carg00735Cucurbita moschata (Rifu)carcmoB0554
Carg00735Cucurbita pepo (Zucchini)carcpeB0554
Carg00735Cucurbita pepo (Zucchini)carcpeB0555
Carg00735Cucurbita pepo (Zucchini)carcpeB0557
Carg00735Cucurbita pepo (Zucchini)carcpeB0562
Carg00735Cucurbita pepo (Zucchini)carcpeB0563
Carg00735Cucurbita pepo (Zucchini)carcpeB0574
Carg00735Wild cucumber (PI 183967)carcpiB0437
Carg00735Wild cucumber (PI 183967)carcpiB0442
Carg00735Wild cucumber (PI 183967)carcpiB0446
Carg00735Cucumber (Chinese Long) v2carcuB0432
Carg00735Cucumber (Chinese Long) v2carcuB0437
Carg00735Cucumber (Chinese Long) v2carcuB0441
Carg00735Cucumber (Chinese Long) v3carcucB0434
Carg00735Cucumber (Chinese Long) v3carcucB0442
Carg00735Bottle gourd (USVL1VR-Ls)carlsiB364
Carg00735Bottle gourd (USVL1VR-Ls)carlsiB366
Carg00735Bottle gourd (USVL1VR-Ls)carlsiB370
Carg00735Melon (DHL92) v3.5.1carmeB0407
Carg00735Melon (DHL92) v3.5.1carmeB0414
Carg00735Melon (DHL92) v3.6.1carmedB0411
Carg00735Melon (DHL92) v3.6.1carmedB0413
Carg00735Melon (DHL92) v3.6.1carmedB0418
Carg00735Watermelon (Charleston Gray)carwcgB0396
Carg00735Watermelon (Charleston Gray)carwcgB0397
Carg00735Watermelon (Charleston Gray)carwcgB0402
Carg00735Watermelon (97103) v1carwmB0399
Carg00735Watermelon (97103) v1carwmB0407
Carg00735Watermelon (97103) v1carwmB0408
Carg00735Watermelon (97103) v2carwmbB0426
Carg00735Watermelon (97103) v2carwmbB0431
Carg00735Wax gourdcarwgoB0491
Carg00735Wax gourdcarwgoB0493
Carg00735Wax gourdcarwgoB0495