Carg00144 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg00144
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	RING-type E3 ubiquitin transferase
Location	Cucurbita_argyrosperma_scaffold_001 : 747868 .. 749530 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTAGAGGTGGCGGCGGAGGCGGCGGCGGCAGCATGGCGGAGCTGACGATCCCGAGCCATTTCCTGTGCCCAATATCGCTGGACTTGATGAAAGATCCAGTCACCATGTCCACCGGCATCACCTACGATCGAGCCAACATTGAGACATGGATTGAAGGAGGCAATTTCAGCTGCCCCTTCACTAACCAACCTTTGCACACCATTGATTCCATTCCTAATCACAACATAAGGAAGATGATCCAAGCTTGGTGCGTCGAGAATAGGACTCATGGGATCGAGAGGATTCCGACGCCGAGGGTTCCCGCCAGCCCCGTGCAGGTTCGGGAGATTCTTGACAAGATCGCTGCTGCGGTCGGGCGGGAGGATTGTGAGGGATGCAAGTCCTTGGTTGAGAAGATCAAGATATTGGTACAAGAGAGTGAAAGGAACAAGAAATGCATTATTGCCAATGGAACAGGTTCGTAAACTACTTCATAGCTAACATCCCACTTCAGGTGGGGAGGAAAACGAAATACCCTTTGTTACAAGGGTGTGTAAACCTTTCCTTAACCGACCCATTTTAAAATTATCGAGGAAAAGCTCAAATAGGACAATATCTGCTAGTGGTTGCCTTCGACTCTTACAAATGAGCGCCCACTTTGGTTGAGGAGTATAACGAAACACCCTTTGTTACAAGGGTCTGTAAATCTCTCCATAACCGACCCATTTTAAAATTATTAAGGAAAATCTCAAATAGGACTCTTACAAATTAGCTACGAGATTCAAAGGTCGAACCTTTTTTATCGTTATTTTTGTTTATATGTTAACAGGAAATGTATTATCCTCCGCATTCGAAGCATTTTCGAAACCCGAACGATTCGAGAAAAGGGTCGAGATTTTAGAAGAAATCTTATCGACGATGGCAATGATCTTCCCTCTACAAGAAGAAGCCATTAAACATCTAAAATCAGAAGCTTCAATGCAAGCATTGGTGTGGTTTGTAAGAGGAGAAGACAAATCAAGAAGAAGAAGCTCAATTTTGGTATTGAAAGAGATAATTTCATCATACCCTGAAAAAGTAAGCGAATTAGGAGAAATCCAAGGAGTATTAGAGGGTCTTATGAAGCTCATAAAAGAACCCATTTGTTCATCTTCAAAAAAGGCCTCACTTTTCATAACATATCATGCCATAGCCTCTTCTTCCAATCAAGAGGGCTTCACAAACGCATTTCTTCAAATGGGGTTGGTCCCTTTGCTACTCGAAACCCTCGTAGACGCCGAGAGAAGCGTATGCGAGAGGGCATTGGGAGTGTTCGATGGCATTTGCGAGACCAAACAAGGAAGAGAAGAGGCGTACGCGCATGCTTTGACGATGCCCGTGATTGTGAAAAAGATACTTAGAGTGTCGGATTTGGCAACCGAGCTATCGGTGTCGATCGTTTGGAAGCTCGTAAAGCACGAGAGTAGAGAAGAGGAAGATGAAGATGAAGATGGAGGAGTTAAAGTAGAAGCTCTTCAAGTTGGAGCATTTCAAAAGCTATTGTTGTTGTTGCAAGTTGGTTGTAGTGAATGGACAAAGGAGAAAGCAACTGAGTTGTTGAAACTCTTGAATAATCTTCATAGGGAAAGGTTAGAATGTATTGATTCTTTGGATTTTAAGGACCTCAAAAGAACCTTTTGA

mRNA sequence

ATGGCTAGAGGTGGCGGCGGAGGCGGCGGCGGCAGCATGGCGGAGCTGACGATCCCGAGCCATTTCCTGTGCCCAATATCGCTGGACTTGATGAAAGATCCAGTCACCATGTCCACCGGCATCACCTACGATCGAGCCAACATTGAGACATGGATTGAAGGAGGCAATTTCAGCTGCCCCTTCACTAACCAACCTTTGCACACCATTGATTCCATTCCTAATCACAACATAAGGAAGATGATCCAAGCTTGGTGCGTCGAGAATAGGACTCATGGGATCGAGAGGATTCCGACGCCGAGGGTTCCCGCCAGCCCCGTGCAGGTTCGGGAGATTCTTGACAAGATCGCTGCTGCGGTCGGGCGGGAGGATTGTGAGGGATGCAAGTCCTTGGTTGAGAAGATCAAGATATTGGTACAAGAGAGTGAAAGGAACAAGAAATGCATTATTGCCAATGGAACAGGAAATGTATTATCCTCCGCATTCGAAGCATTTTCGAAACCCGAACGATTCGAGAAAAGGGTCGAGATTTTAGAAGAAATCTTATCGACGATGGCAATGATCTTCCCTCTACAAGAAGAAGCCATTAAACATCTAAAATCAGAAGCTTCAATGCAAGCATTGGTGTGGTTTGTAAGAGGAGAAGACAAATCAAGAAGAAGAAGCTCAATTTTGGTATTGAAAGAGATAATTTCATCATACCCTGAAAAAGTAAGCGAATTAGGAGAAATCCAAGGAGTATTAGAGGGTCTTATGAAGCTCATAAAAGAACCCATTTGTTCATCTTCAAAAAAGGCCTCACTTTTCATAACATATCATGCCATAGCCTCTTCTTCCAATCAAGAGGGCTTCACAAACGCATTTCTTCAAATGGGGTTGGTCCCTTTGCTACTCGAAACCCTCGTAGACGCCGAGAGAAGCGTATGCGAGAGGGCATTGGGAGTGTTCGATGGCATTTGCGAGACCAAACAAGGAAGAGAAGAGGCGTACGCGCATGCTTTGACGATGCCCGTGATTGTGAAAAAGATACTTAGAGTGTCGGATTTGGCAACCGAGCTATCGGTGTCGATCGTTTGGAAGCTCGTAAAGCACGAGAGTAGAGAAGAGGAAGATGAAGATGAAGATGGAGGAGTTAAAGTAGAAGCTCTTCAAGTTGGAGCATTTCAAAAGCTATTGTTGTTGTTGCAAGTTGGTTGTAGTGAATGGACAAAGGAGAAAGCAACTGAGTTGTTGAAACTCTTGAATAATCTTCATAGGGAAAGGTTAGAATGTATTGATTCTTTGGATTTTAAGGACCTCAAAAGAACCTTTTGA

Coding sequence (CDS)

ATGGCTAGAGGTGGCGGCGGAGGCGGCGGCGGCAGCATGGCGGAGCTGACGATCCCGAGCCATTTCCTGTGCCCAATATCGCTGGACTTGATGAAAGATCCAGTCACCATGTCCACCGGCATCACCTACGATCGAGCCAACATTGAGACATGGATTGAAGGAGGCAATTTCAGCTGCCCCTTCACTAACCAACCTTTGCACACCATTGATTCCATTCCTAATCACAACATAAGGAAGATGATCCAAGCTTGGTGCGTCGAGAATAGGACTCATGGGATCGAGAGGATTCCGACGCCGAGGGTTCCCGCCAGCCCCGTGCAGGTTCGGGAGATTCTTGACAAGATCGCTGCTGCGGTCGGGCGGGAGGATTGTGAGGGATGCAAGTCCTTGGTTGAGAAGATCAAGATATTGGTACAAGAGAGTGAAAGGAACAAGAAATGCATTATTGCCAATGGAACAGGAAATGTATTATCCTCCGCATTCGAAGCATTTTCGAAACCCGAACGATTCGAGAAAAGGGTCGAGATTTTAGAAGAAATCTTATCGACGATGGCAATGATCTTCCCTCTACAAGAAGAAGCCATTAAACATCTAAAATCAGAAGCTTCAATGCAAGCATTGGTGTGGTTTGTAAGAGGAGAAGACAAATCAAGAAGAAGAAGCTCAATTTTGGTATTGAAAGAGATAATTTCATCATACCCTGAAAAAGTAAGCGAATTAGGAGAAATCCAAGGAGTATTAGAGGGTCTTATGAAGCTCATAAAAGAACCCATTTGTTCATCTTCAAAAAAGGCCTCACTTTTCATAACATATCATGCCATAGCCTCTTCTTCCAATCAAGAGGGCTTCACAAACGCATTTCTTCAAATGGGGTTGGTCCCTTTGCTACTCGAAACCCTCGTAGACGCCGAGAGAAGCGTATGCGAGAGGGCATTGGGAGTGTTCGATGGCATTTGCGAGACCAAACAAGGAAGAGAAGAGGCGTACGCGCATGCTTTGACGATGCCCGTGATTGTGAAAAAGATACTTAGAGTGTCGGATTTGGCAACCGAGCTATCGGTGTCGATCGTTTGGAAGCTCGTAAAGCACGAGAGTAGAGAAGAGGAAGATGAAGATGAAGATGGAGGAGTTAAAGTAGAAGCTCTTCAAGTTGGAGCATTTCAAAAGCTATTGTTGTTGTTGCAAGTTGGTTGTAGTGAATGGACAAAGGAGAAAGCAACTGAGTTGTTGAAACTCTTGAATAATCTTCATAGGGAAAGGTTAGAATGTATTGATTCTTTGGATTTTAAGGACCTCAAAAGAACCTTTTGA

Protein sequence

MARGGGGGGGGSMAELTIPSHFLCPISLDLMKDPVTMSTGITYDRANIETWIEGGNFSCPFTNQPLHTIDSIPNHNIRKMIQAWCVENRTHGIERIPTPRVPASPVQVREILDKIAAAVGREDCEGCKSLVEKIKILVQESERNKKCIIANGTGNVLSSAFEAFSKPERFEKRVEILEEILSTMAMIFPLQEEAIKHLKSEASMQALVWFVRGEDKSRRRSSILVLKEIISSYPEKVSELGEIQGVLEGLMKLIKEPICSSSKKASLFITYHAIASSSNQEGFTNAFLQMGLVPLLLETLVDAERSVCERALGVFDGICETKQGREEAYAHALTMPVIVKKILRVSDLATELSVSIVWKLVKHESREEEDEDEDGGVKVEALQVGAFQKLLLLLQVGCSEWTKEKATELLKLLNNLHRERLECIDSLDFKDLKRTF

Homology

[Close]

BLAST of Carg00144 vs. NCBI nr
Match: XP_022942676.1 (U-box domain-containing protein 21-like [Cucurbita moschata])

HSP 1 Score: 802.4 bits (2071), Expect = 7.8e-229
Identity = 413/424 (97.41%), Postives = 413/424 (97.41%), Query Frame = 0


Query: 13  MAELTIPSHFLCPISLDLMKDPVTMSTGITYDRANIETWIEGGNFSCPFTNQPLHTIDSI 72
           MAELTIPSHFLCPISLDLMKDPVTMSTGITYDRANIETWIEGGNFSCPFTNQPLHTIDSI
Sbjct: 26  MAELTIPSHFLCPISLDLMKDPVTMSTGITYDRANIETWIEGGNFSCPFTNQPLHTIDSI 85

Query: 73  PNHNIRKMIQAWCVENRTHGIERIPTPRVPASPVQVREILDKIAAAVGREDCEGCKSLVE 132
           PNHNIRKMIQAWCVENR HGIERIPTPRVPASPVQVREILDKIAAAV REDCEGCKSLVE
Sbjct: 86  PNHNIRKMIQAWCVENRAHGIERIPTPRVPASPVQVREILDKIAAAVRREDCEGCKSLVE 145

Query: 133 KIKILVQESERNKKCIIANGTGNVLSSAFEAFSKPERFEKRVEILEEILSTMAMIFPLQE 192
           KIKILVQESERNKKCIIANGTGNVLSSAFEAFSKPERFEKRVEILEEILSTMAMIFPLQE
Sbjct: 146 KIKILVQESERNKKCIIANGTGNVLSSAFEAFSKPERFEKRVEILEEILSTMAMIFPLQE 205

Query: 193 EAIKHLKSEASMQALVWFVRGEDKSRRRSSILVLKEIISSYPEKVSELGEIQGVLEGLMK 252
           EAIKHLKSEASMQALVWFVRGEDKSRRRSSILVLKEIISSYPEKVSELGEIQGVLEGLMK
Sbjct: 206 EAIKHLKSEASMQALVWFVRGEDKSRRRSSILVLKEIISSYPEKVSELGEIQGVLEGLMK 265

Query: 253 LIKEPICSSSKKASLFITYHAIASSSNQEGFTNAFLQMGLVPLLLETLVDAERSVCERAL 312
           LIKEPICSSSKKASLFITYHAIASSSNQEGFT AFLQMGLVPLLLETLVDAERSVCERAL
Sbjct: 266 LIKEPICSSSKKASLFITYHAIASSSNQEGFTKAFLQMGLVPLLLETLVDAERSVCERAL 325

Query: 313 GVFDGICETKQGREEAYAHALTMPVIVKKILRVSDLATELSVSIVWKLVKHESREXXXXX 372
           GVFDGICETKQGREEAYAHALTMPVIVKKILRVSDL TELSVSIVWKLVKHESRE     
Sbjct: 326 GVFDGICETKQGREEAYAHALTMPVIVKKILRVSDLVTELSVSIVWKLVKHESRE-EEED 385

Query: 373 XXGGVKVEALQVGAFQKLLLLLQVGCSEWTKEKATELLKLLNNLHRERLECIDSLDFKDL 432
             GGVKVEALQVGAFQKLLLLLQVGCSEWTKEKATELLKLLNNLHRERLECIDSLDFKDL
Sbjct: 386 EDGGVKVEALQVGAFQKLLLLLQVGCSEWTKEKATELLKLLNNLHRERLECIDSLDFKDL 445

Query: 433 KRTF 437
           KRTF
Sbjct: 446 KRTF 448

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BLAST of Carg00144 vs. NCBI nr
Match: XP_023514876.1 (U-box domain-containing protein 21-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 801.6 bits (2069), Expect = 1.3e-228
Identity = 412/424 (97.17%), Postives = 414/424 (97.64%), Query Frame = 0


Query: 13  MAELTIPSHFLCPISLDLMKDPVTMSTGITYDRANIETWIEGGNFSCPFTNQPLHTIDSI 72
           MAELTIPSHFLCPISLDLMKDPVTMSTGITYDRANIETWIEGGNFSCPFTNQPLHTIDSI
Sbjct: 25  MAELTIPSHFLCPISLDLMKDPVTMSTGITYDRANIETWIEGGNFSCPFTNQPLHTIDSI 84

Query: 73  PNHNIRKMIQAWCVENRTHGIERIPTPRVPASPVQVREILDKIAAAVGREDCEGCKSLVE 132
           PNHNIRKMIQAWCVENR HGIERIPTP+VPASPVQVREILDKIAAAVGREDCEGCKSLVE
Sbjct: 85  PNHNIRKMIQAWCVENRAHGIERIPTPKVPASPVQVREILDKIAAAVGREDCEGCKSLVE 144

Query: 133 KIKILVQESERNKKCIIANGTGNVLSSAFEAFSKPERFEKRVEILEEILSTMAMIFPLQE 192
           KIKILVQESERNKKCIIANGTGNVLSSAFEAFSKPERFEKRVEILEEIL TMAMIFPLQE
Sbjct: 145 KIKILVQESERNKKCIIANGTGNVLSSAFEAFSKPERFEKRVEILEEILWTMAMIFPLQE 204

Query: 193 EAIKHLKSEASMQALVWFVRGEDKSRRRSSILVLKEIISSYPEKVSELGEIQGVLEGLMK 252
           EAIKHLKSEASMQALVWFVRGEDKSRRRSSILVLKEIISSYPEKVSELGEIQGVLEGLMK
Sbjct: 205 EAIKHLKSEASMQALVWFVRGEDKSRRRSSILVLKEIISSYPEKVSELGEIQGVLEGLMK 264

Query: 253 LIKEPICSSSKKASLFITYHAIASSSNQEGFTNAFLQMGLVPLLLETLVDAERSVCERAL 312
           LIKEPICSSSKKASLFITYHAIASSSNQEGFT AFLQMGLVPLLLETLVDAERSVCERAL
Sbjct: 265 LIKEPICSSSKKASLFITYHAIASSSNQEGFTKAFLQMGLVPLLLETLVDAERSVCERAL 324

Query: 313 GVFDGICETKQGREEAYAHALTMPVIVKKILRVSDLATELSVSIVWKLVKHESREXXXXX 372
           GVFDGICETK+GREEAYAHALTMPVIVKKILRVSDLATELSVSIVWKLVKHESRE     
Sbjct: 325 GVFDGICETKRGREEAYAHALTMPVIVKKILRVSDLATELSVSIVWKLVKHESRE--GED 384

Query: 373 XXGGVKVEALQVGAFQKLLLLLQVGCSEWTKEKATELLKLLNNLHRERLECIDSLDFKDL 432
             GGVKVEALQVGAFQKLLLLLQVGCSEWTKEKATELLKLLNNLHRERLECIDSLDFKDL
Sbjct: 385 EDGGVKVEALQVGAFQKLLLLLQVGCSEWTKEKATELLKLLNNLHRERLECIDSLDFKDL 444

Query: 433 KRTF 437
           KRTF
Sbjct: 445 KRTF 446

[Close]

BLAST of Carg00144 vs. NCBI nr
Match: XP_022996865.1 (U-box domain-containing protein 21-like [Cucurbita maxima])

HSP 1 Score: 795.4 bits (2053), Expect = 9.6e-227
Identity = 408/424 (96.23%), Postives = 411/424 (96.93%), Query Frame = 0


Query: 13  MAELTIPSHFLCPISLDLMKDPVTMSTGITYDRANIETWIEGGNFSCPFTNQPLHTIDSI 72
           M ELTIPSHFLCPISLDLMKDPVTMSTGITYDRANIETWIEGGNFSCPFTNQPLHTIDSI
Sbjct: 24  MTELTIPSHFLCPISLDLMKDPVTMSTGITYDRANIETWIEGGNFSCPFTNQPLHTIDSI 83

Query: 73  PNHNIRKMIQAWCVENRTHGIERIPTPRVPASPVQVREILDKIAAAVGREDCEGCKSLVE 132
           PNHNIRKMIQAWCVENR HGIERIPTPRVPASPVQVREILDKIAAA GREDCE CKS+VE
Sbjct: 84  PNHNIRKMIQAWCVENRAHGIERIPTPRVPASPVQVREILDKIAAAAGREDCEECKSMVE 143

Query: 133 KIKILVQESERNKKCIIANGTGNVLSSAFEAFSKPERFEKRVEILEEILSTMAMIFPLQE 192
           KIKILVQESERNKKCIIANGTGNVLSSAFEAFSKPERFEKRVEILEEILSTMAMIFPLQE
Sbjct: 144 KIKILVQESERNKKCIIANGTGNVLSSAFEAFSKPERFEKRVEILEEILSTMAMIFPLQE 203

Query: 193 EAIKHLKSEASMQALVWFVRGEDKSRRRSSILVLKEIISSYPEKVSELGEIQGVLEGLMK 252
           EAIKHLKSEASMQALVWFVRGEDKSRRRSSILVLKEIISSYPEKVSELGEIQGVLEG+MK
Sbjct: 204 EAIKHLKSEASMQALVWFVRGEDKSRRRSSILVLKEIISSYPEKVSELGEIQGVLEGVMK 263

Query: 253 LIKEPICSSSKKASLFITYHAIASSSNQEGFTNAFLQMGLVPLLLETLVDAERSVCERAL 312
           LIKEPICSSSKKASLFITYHAIASSSNQEGFT AFLQMGLV LLLETL+DAERSVCERAL
Sbjct: 264 LIKEPICSSSKKASLFITYHAIASSSNQEGFTKAFLQMGLVSLLLETLIDAERSVCERAL 323

Query: 313 GVFDGICETKQGREEAYAHALTMPVIVKKILRVSDLATELSVSIVWKLVKHESREXXXXX 372
           GVFDGICETKQGREEAYAHALTMPVIVKKILRVSDLATELSVSIVWKLVKHESRE     
Sbjct: 324 GVFDGICETKQGREEAYAHALTMPVIVKKILRVSDLATELSVSIVWKLVKHESRE-DEDE 383

Query: 373 XXGGVKVEALQVGAFQKLLLLLQVGCSEWTKEKATELLKLLNNLHRERLECIDSLDFKDL 432
             GGVKVEALQVGAFQKLLLLLQVGCSEWTKEKATELLKLLNNLHRERLECIDSLDFKDL
Sbjct: 384 EDGGVKVEALQVGAFQKLLLLLQVGCSEWTKEKATELLKLLNNLHRERLECIDSLDFKDL 443

Query: 433 KRTF 437
           KRTF
Sbjct: 444 KRTF 446

[Close]

BLAST of Carg00144 vs. NCBI nr
Match: XP_004142305.1 (PREDICTED: U-box domain-containing protein 21-like [Cucumis sativus] >KGN49607.1 hypothetical protein Csa_5G023870 [Cucumis sativus])

HSP 1 Score: 703.4 bits (1814), Expect = 4.9e-199
Identity = 358/425 (84.24%), Postives = 384/425 (90.35%), Query Frame = 0


Query: 15  ELTIPSHFLCPISLDLMKDPVTMSTGITYDRANIETWIEGGNFSCPFTNQPLHTIDSIPN 74
           ELTIP+HF CPISLDLMKDPVT+STGITYDRA+IETWIEGGNF+CPFTNQPL TIDSIPN
Sbjct: 24  ELTIPTHFRCPISLDLMKDPVTLSTGITYDRASIETWIEGGNFTCPFTNQPLQTIDSIPN 83

Query: 75  HNIRKMIQAWCVENRTHGIERIPTPRVPASPVQVREILDKIAAAVGREDCEGCKSLVEKI 134
           HNIRKMIQ WCVENR +GIERIPTPRVPASP QVREIL+K+AAA  R DC+GCKS+VEKI
Sbjct: 84  HNIRKMIQDWCVENRAYGIERIPTPRVPASPAQVREILEKMAAAARRGDCDGCKSMVEKI 143

Query: 135 KILVQESERNKKCIIANGTGNVLSSAFEAFSKPERFEKRVEILEEILSTMAMIFPLQEEA 194
           K L +ESERNKKCIIANGTGN LSS FEAFS PE FEKR+EILEEILS M + FPLQEE+
Sbjct: 144 KKLGKESERNKKCIIANGTGNTLSSIFEAFSNPETFEKRIEILEEILSAMTVAFPLQEES 203

Query: 195 IKHLKSEASMQALVWFVRGEDKSRRRSSILVLKEIISSYPEKVSELGEIQGVLEGLMKLI 254
           IKHLKSE S+Q+LVWF++G D S RR+S+LVLKEIISSYPEKV ELGEIQG LEGL+KLI
Sbjct: 204 IKHLKSETSLQSLVWFLKGGDISGRRNSVLVLKEIISSYPEKVDELGEIQGALEGLIKLI 263

Query: 255 KEPICSSSKKASLFITYHAIA---SSSNQEGFTNAFLQMGLVPLLLETLVDAERSVCERA 314
           K+PICSSS+KASLFITYH IA   SSSN+E FT   LQMGLV LLLETLVDAERSVCERA
Sbjct: 264 KDPICSSSRKASLFITYHVIASTSSSSNRERFTKELLQMGLVSLLLETLVDAERSVCERA 323

Query: 315 LGVFDGICETKQGREEAYAHALTMPVIVKKILRVSDLATELSVSIVWKLVKHESREXXXX 374
           LG FDGICETKQGREEAYAHALTMPVIVKKILRVSDLATELSV IVWKLVKHES+E    
Sbjct: 324 LGAFDGICETKQGREEAYAHALTMPVIVKKILRVSDLATELSVCIVWKLVKHESKE---- 383

Query: 375 XXXGGVKVEALQVGAFQKLLLLLQVGCSEWTKEKATELLKLLNNLHRERLECIDSLDFKD 434
              GG+KVEALQVGAFQKLLLLLQVGCSEWTKEKATELLKLLNNLHR+RLECIDSLDFKD
Sbjct: 384 EEDGGIKVEALQVGAFQKLLLLLQVGCSEWTKEKATELLKLLNNLHRDRLECIDSLDFKD 443

Query: 435 LKRTF 437
           LKRTF
Sbjct: 444 LKRTF 444

[Close]

BLAST of Carg00144 vs. NCBI nr
Match: XP_008465536.1 (PREDICTED: U-box domain-containing protein 21-like [Cucumis melo])

HSP 1 Score: 694.5 bits (1791), Expect = 2.3e-196
Identity = 355/425 (83.53%), Postives = 381/425 (89.65%), Query Frame = 0


Query: 15  ELTIPSHFLCPISLDLMKDPVTMSTGITYDRANIETWIEGGNFSCPFTNQPLHTIDSIPN 74
           ELTIP+HF CPISLDLMKDPVT+STGITYDRA+IETWIEGGNF+CPFTNQPL TIDSIPN
Sbjct: 24  ELTIPTHFRCPISLDLMKDPVTLSTGITYDRASIETWIEGGNFTCPFTNQPLQTIDSIPN 83

Query: 75  HNIRKMIQAWCVENRTHGIERIPTPRVPASPVQVREILDKIAAAVGREDCEGCKSLVEKI 134
           HNIRKMIQ WCVENR +GIERIPTPRVPASP QVR+IL+K+ AA  R D EGCKS+VEKI
Sbjct: 84  HNIRKMIQDWCVENRAYGIERIPTPRVPASPAQVRDILEKMTAAARRGDFEGCKSMVEKI 143

Query: 135 KILVQESERNKKCIIANGTGNVLSSAFEAFSKPERFEKRVEILEEILSTMAMIFPLQEEA 194
           K L +ESERNKKCIIANGTGN  SS FEAFS PE FEKR+EILEEILS M M+FPLQEE+
Sbjct: 144 KNLGKESERNKKCIIANGTGNTFSSIFEAFSNPETFEKRIEILEEILSAMTMVFPLQEES 203

Query: 195 IKHLKSEASMQALVWFVRGEDKSRRRSSILVLKEIISSYPEKVSELGEIQGVLEGLMKLI 254
           IKHLKSE S+Q+L WF++G D S RR+S+LVLKEIISSYPEKV ELG IQG LEGL+KLI
Sbjct: 204 IKHLKSETSLQSLAWFLKGGDISGRRNSVLVLKEIISSYPEKVDELGVIQGALEGLIKLI 263

Query: 255 KEPICSSSKKASLFITYHAIA---SSSNQEGFTNAFLQMGLVPLLLETLVDAERSVCERA 314
           K+PICSSSKKASLFITYH IA   SSSNQ  FT A LQMGLV LLLETLVDAERSVCERA
Sbjct: 264 KDPICSSSKKASLFITYHVIASTSSSSNQGRFTKALLQMGLVSLLLETLVDAERSVCERA 323

Query: 315 LGVFDGICETKQGREEAYAHALTMPVIVKKILRVSDLATELSVSIVWKLVKHESREXXXX 374
           LG FDGICETKQGREEAYAHALTMPVIVKKILRVSDLATELSVSIVWKLVK+ES+E    
Sbjct: 324 LGAFDGICETKQGREEAYAHALTMPVIVKKILRVSDLATELSVSIVWKLVKNESKE---E 383

Query: 375 XXXGGVKVEALQVGAFQKLLLLLQVGCSEWTKEKATELLKLLNNLHRERLECIDSLDFKD 434
              GG++VEALQVGAFQKLLLLLQVGCSEWTKEKATELLKLLNNLHR+RLECIDSLDFKD
Sbjct: 384 KEDGGIEVEALQVGAFQKLLLLLQVGCSEWTKEKATELLKLLNNLHRDRLECIDSLDFKD 443

Query: 435 LKRTF 437
           LKRTF
Sbjct: 444 LKRTF 445

[Close]

BLAST of Carg00144 vs. TAIR10
Match: AT5G37490.1 (ARM repeat superfamily protein)

HSP 1 Score: 362.8 bits (930), Expect = 2.9e-100
Identity = 204/425 (48.00%), Postives = 272/425 (64.00%), Query Frame = 0


Query: 14  AELTIPSHFLCPISLDLMKDPVTMSTGITYDRANIETWIEGGNFSCPFTNQPLHTIDSIP 73
           +E+TIP  F CPIS+DLMKDPV +STGITYDR +IETWI  GN +CP TN  L T D IP
Sbjct: 27  SEITIPPEFQCPISIDLMKDPVIISTGITYDRVSIETWINSGNKTCPVTNTVLTTFDQIP 86

Query: 74  NHNIRKMIQAWCVENRTHGIERIPTPRVPASPVQVREILDKIAAAVGREDCEGCKSLVEK 133
           NH IRKMIQ WCVE  +  I+RIPTPRVP  P +V EI  K+++A  R D E C  ++EK
Sbjct: 87  NHTIRKMIQGWCVEKGSPLIQRIPTPRVPLMPCEVYEISRKLSSATRRGDYEKCGVIIEK 146

Query: 134 IKILVQESERNKKCIIANGTGNVLSSAFEAFSKPERFEKRVEILEEILSTMAMIFPLQEE 193
           IK L  ESE+N+KC+  N  G VL   F+ FS     EK   +L EILS +  +FP+  E
Sbjct: 147 IKKLGDESEKNRKCVNENSVGWVLCDCFDKFSGD---EKLTFMLNEILSLLTWMFPIGLE 206

Query: 194 AIKHLKSEASMQALVWFVRGEDKSRRRSSILVLKEIISSYPEKVSELGEIQGVLEGLMKL 253
            I  L S  S + +   ++  D S R+++  ++KEI+S    +V       GV E L+KL
Sbjct: 207 GISKLASATSFRCVAGLLKSTDDSVRQNAAFIMKEILSLDETRVHSFAVENGVAEALVKL 266

Query: 254 IKEPICSSSKKASLFITYHAIASSSNQEGFTNAFLQMGLVPLLLETLVDAERSVCERALG 313
           I++ + SSS K+SL   Y  +          + FL++GLV + +E +VDAE SVCE+AL 
Sbjct: 267 IRDSVSSSSTKSSLIAIYQMVLQKPE---IASEFLEIGLVSITVEMIVDAENSVCEKALA 326

Query: 314 VFDGICETKQGREEAYAHALTMPVIVKKILRVSDLATELSVSIVWKLVKHESREXXXXXX 373
           V D ICET+ GREE   +AL MP++VKKI +VS+LAT  S+S++ KL K           
Sbjct: 327 VLDAICETEHGREEVRKNALVMPLLVKKIAKVSELATRSSMSMILKLWK----------T 386

Query: 374 XGGVKVE-ALQVGAFQKLLLLLQVGCSEWTKEKATELLKLLNNLHRERLECIDSL-DFKD 433
              V VE A+++GAFQK+LL+LQVG  E TKEKATELLK++N   +   +C+DSL +FK 
Sbjct: 387 GNTVAVEDAVRLGAFQKVLLVLQVGYGEETKEKATELLKMMNTQMKLMSDCVDSLKEFKY 435

Query: 434 LKRTF 437
           +K+ F
Sbjct: 447 IKKPF 435

[Close]

BLAST of Carg00144 vs. TAIR10
Match: AT1G66160.1 (CYS, MET, PRO, and GLY protein 1)

HSP 1 Score: 305.4 bits (781), Expect = 5.4e-83
Identity = 181/426 (42.49%), Postives = 258/426 (60.56%), Query Frame = 0


Query: 15  ELTIPSHFLCPISLDLMKDPVTMSTGITYDRANIETWIEGGNFSCPFTNQPLHTIDSIPN 74
           E+TIPS F CPIS +LMKDPV +++GITYDR NIE W E G  +CP TN  L +++ IPN
Sbjct: 30  EITIPSQFQCPISYELMKDPVIIASGITYDRENIEKWFESGYQTCPVTNTVLTSLEQIPN 89

Query: 75  HNIRKMIQAWCVENRTHGIERIPTPRVPASPVQVREILDKIAAAVGREDCEGCKSLVEKI 134
           H IR+MIQ WC  +   GIERIPTPRVP +  QV EI ++++AA  R D   C  +V K+
Sbjct: 90  HTIRRMIQGWCGSSLGGGIERIPTPRVPVTSHQVSEICERLSAATRRGDYAACMEMVTKM 149

Query: 135 KILVQESERNKKCIIANGTGNVLSSAFEAFSKPERFEKRVEILEEILSTMAMIFPLQEEA 194
             L +ESERN+KC+  NG G VL   F+AFS+         +LEE +S +  + P+  E 
Sbjct: 150 TRLGKESERNRKCVKENGAGLVLCVCFDAFSENANASL---LLEETVSVLTWMLPIGLEG 209

Query: 195 IKHLKSEASMQALVWFVRGEDKSRRRSSILVLKEIISSYPEKVSELGEIQGVLEGLMKLI 254
              L + +S   LV  +R  D    +++  ++KE++      V  L +I GV E  MK I
Sbjct: 210 QSKLTTTSSFNRLVELLRNGD----QNAAFLIKELLELNVTHVHALTKINGVQEAFMKSI 269

Query: 255 KEPICSSSKKASLFITYHAIASSSNQEGFTNAFLQMGLVPLLLETLVDAERSVCERALGV 314
                 S+   SL   +H I   +NQE   + FL++ LV + +E LVD+E SVCE+AL V
Sbjct: 270 NR---DSTCVNSLISIHHMIL--TNQE-TVSRFLELDLVNITVEMLVDSENSVCEKALTV 329

Query: 315 FDGICETKQGREEAYAHALTMPVIVKKILRVSDLATELSVSIVWKLVKHESREXXXXXXX 374
            + ICETK+GRE+   + L +P++VKKIL++S+   +  VS++WK+ K            
Sbjct: 330 LNVICETKEGREKVRRNKLVIPILVKKILKISE--KKDLVSVMWKVCK---------SGD 389

Query: 375 GGVKVEALQVGAFQKLLLLLQVGCSEWTKEKATELLKLLNNLHRER----LECIDSLDFK 434
           G    EAL++GAF+KL+++LQVGC E TKEK TELLK++N + +           S++FK
Sbjct: 390 GSEVEEALRLGAFKKLVVMLQVGCGEGTKEKVTELLKMMNKVMKMNGFVDRSYSSSIEFK 431

Query: 435 DLKRTF 437
            +K+ F
Sbjct: 450 HVKKPF 431

[Close]

BLAST of Carg00144 vs. TAIR10
Match: AT3G02840.1 (ARM repeat superfamily protein)

HSP 1 Score: 245.7 bits (626), Expect = 5.1e-65
Identity = 147/349 (42.12%), Postives = 223/349 (63.90%), Query Frame = 0


Query: 93  IERIPTPRVPASPVQVREILDKIAAAVGREDCEGCKSLVEKIKILVQESERNKKCIIANG 152
           IERI +PRV  +P    EI  ++  A  RE+   C  +V KIK L +  + NKKC++ NG
Sbjct: 40  IERIQSPRVLLTPRDAVEISRRLQNAAAREEYAECLEIVSKIKNLGRGGDTNKKCLVQNG 99

Query: 153 TGNVLSSAFEAFSKPERFEKRVEILEEILSTMAMIFPL-QEEAIKHLKSEASMQALVWFV 212
           +   LSS FE F+     +  + +LEEIL  ++   PL + E    + S AS+  LV F+
Sbjct: 100 SVLALSSCFERFAAAR--DGHMRLLEEILFVLSSWLPLNRSEGFNKMGSTASLNCLVRFL 159

Query: 213 RGEDKSRRRSSILVLKEIISSYPEKVSELGEIQGVLEGLMKLIKEPICSSSKKASLFITY 272
            G+D   R+++   ++E+I+     V  L +++G  EGL+K+I++ + +SS KASL + Y
Sbjct: 160 NGKDAKTRQNAAFCIREVIAVDKRYVYALTDVEGACEGLVKIIRDSVSTSSTKASLMVIY 219

Query: 273 HAIASSSNQEGFTNAFLQMGLVPLLLETLV-DAERSVCERALGVFDGICETKQGREEAYA 332
            AI+S+   +  T  F+++GLV L+ E +V +AE+SVCER+L V +  C+ +QG+E+   
Sbjct: 220 RAISSN---DKITEKFVKLGLVELITEMMVNNAEKSVCERSLVVLNATCDNEQGKEDVLR 279

Query: 333 HALTMPVIVKKILRVSDLATELSVSIVWKLVKHESREXXXXXXXGGVKVEALQVGAFQKL 392
           +AL +P++VKKILRVSDLAT+ SVSI+WKL K++            + VEALQVGAF+KL
Sbjct: 280 NALIVPLLVKKILRVSDLATQCSVSILWKLWKNKK----DGECDDRLLVEALQVGAFEKL 339

Query: 393 LLLLQVGCSEWTKEKATELLKLLNNLHR--ERLECID-SLDFKDLKRTF 437
           L+LLQVGC + TKEKA+ELL+ LN      E+  C+D S+  K++K++F
Sbjct: 340 LVLLQVGCEDKTKEKASELLRNLNRCRNEIEKTNCVDSSMHLKNVKKSF 379

[Close]

BLAST of Carg00144 vs. TAIR10
Match: AT3G19380.1 (plant U-box 25)

HSP 1 Score: 208.0 bits (528), Expect = 1.2e-53
Identity = 138/420 (32.86%), Postives = 219/420 (52.14%), Query Frame = 0


Query: 16  LTIPSHFLCPISLDLMKDPVTMSTGITYDRANIETWIE-GGNFSCPFTNQPLHTIDSIPN 75
           + IP HF CPISL+LM+DPVT+ TG TYDRA+IE+W+  G N +CP T  PL     IPN
Sbjct: 12  IQIPYHFRCPISLELMQDPVTVCTGQTYDRASIESWVSIGNNTTCPVTRAPLSDFTLIPN 71

Query: 76  HNIRKMIQAWCVENRTHGIERIPTPRVPASPVQVREILDKIAAAVGRE-DCEGCKSLVEK 135
           H +R++IQ WCV NR++G+ERIPTP+ PA P  VR +L + +A  G         + + +
Sbjct: 72  HTLRRLIQEWCVANRSNGVERIPTPKQPADPTSVRALLSQASAITGTHVSVRSRAAALRR 131

Query: 136 IKILVQESERNKKCIIANGTGNVLSSAFEAFSKPERFEKRVEILEEILSTMAMIFPLQEE 195
           ++   ++S++N+  I A+    +L      FS+        E++ E L+ + M+   +  
Sbjct: 132 LRGFARDSDKNRVLIAAHNATEILIKIL--FSE----TTSSELVSESLALLVMLPITEPN 191

Query: 196 AIKHLKSEASMQALVWFVRGEDKSRRRSSILVLKEIISSYPEKVSELGEI---QGVLEGL 255
               + S+      +  +  +     R +   L EI+S+  +     G I   + V EG+
Sbjct: 192 QFVSISSDPGRVEFLTRLLFDSSIETRVNAAALIEIVSTGTKSADLKGSISNSESVFEGV 251

Query: 256 MKLIKEPICSSSKKASLFITYHAIASSSNQEGFTNAFLQMGLVPLLLETL-VDAERSVCE 315
           + L++ PI   S + +L I    + +  + +   +  +  G   +L++ L  D +R   E
Sbjct: 252 LDLLRNPI---SSRRALKIGIKTLFALCSVKSTRHIAITAGAPEILIDRLAADFDRCDTE 311

Query: 316 RALGVFDGICETKQGREEAYAHALTMPVIVKKILRVSDLATELSVSIVWKLVKHESREXX 375
           RAL   + +C T +G      HALT+P++VK ILRVSD ATE +   +  L   E R   
Sbjct: 312 RALATVELLCRTPEGCAAFGEHALTVPLLVKTILRVSDRATEYAAGALLALCTAEER--- 371

Query: 376 XXXXXGGVKVEALQVGAFQKLLLLLQVGCSEWTKEKATELLKLLNNLHRERLECIDSLDF 430
                   + EA   G   +LLL++Q  C+E  K+KA +LLKLL +   +     +S DF
Sbjct: 372 -------WREEAAGAGVVVQLLLMVQSECTERAKKKAQKLLKLLRDSWPDYNSFANSDDF 412

[Close]

BLAST of Carg00144 vs. TAIR10
Match: AT1G49780.1 (plant U-box 26)

HSP 1 Score: 204.5 bits (519), Expect = 1.3e-52
Identity = 136/405 (33.58%), Postives = 211/405 (52.10%), Query Frame = 0


Query: 16  LTIPSHFLCPISLDLMKDPVTMSTGITYDRANIETWIEGGNFSCPFTNQPLHTIDSIPNH 75
           + IP HF CPISLDLM DPVT+STG TYDR +I++WI  GN +CP T   L     IPNH
Sbjct: 12  IQIPYHFRCPISLDLMSDPVTISTGQTYDRTSIDSWIAMGNTTCPVTRVALSDFTLIPNH 71

Query: 76  NIRKMIQAWCVENRTHGIERIPTPRVPASPVQVREILDKIAAAVGRE-DCEGCKSLVEKI 135
            +R++IQ WCV NR++G+ERIPTP+ PA P+ VR +L + +A  G         + + ++
Sbjct: 72  TLRRLIQEWCVANRSNGVERIPTPKQPADPISVRSLLSQASAITGTHVSVRSRAAAIRRL 131

Query: 136 KILVQESERNKKCIIANGTGNVLSSAFEAFSKPERFEKRVEILEEILSTMAMIFPLQEEA 195
           + L ++SE+N+  I  +    +L      F+  E      E++ E L+ + ++  + E  
Sbjct: 132 RGLARDSEKNRVLIAGHNAREILVRIL--FADIETTSLSSELVSESLALLVLLH-MTETE 191

Query: 196 IKHLKSEASMQALVWFVRGEDKSRRRSSILVLKEIISSYPEKVSELGEIQG---VLEGLM 255
            + + S+ S    +  +  +     R +   L E++ +  + +     I G   + EG++
Sbjct: 192 CEAVASDPSRVGFMTRLLFDSSIEIRVNAAALIEMVLTGAKSMDLKLIISGSDSIFEGVL 251

Query: 256 KLIKEPICSSSKKASLFITYHAIASSSNQEGFTNAFLQMGLVPLLLETL-VDAERSVCER 315
            L+K PI   S + +L I   AI +    +   +  +  G   +L++ L  D +R   ER
Sbjct: 252 DLLKNPI---SSRRALKIGIKAIFALCLVKQTRHLAISAGAPGILIDRLAADFDRCDTER 311

Query: 316 ALGVFDGICETKQGREEAYAHALTMPVIVKKILRVSDLATELSVSIVWKLVKHESREXXX 375
            L   + +C   +G      HALT+P++VK ILRVSD ATE +   +  L   E R    
Sbjct: 312 GLATVELLCRLPEGCAAFGEHALTVPLMVKTILRVSDRATEYAAGALLALCTAEER---- 371

Query: 376 XXXXGGVKVEALQVGAFQKLLLLLQVGCSEWTKEKATELLKLLNN 416
                  + EA   G   +LLLL+Q  C+E  K KA  LLKLL +
Sbjct: 372 ------CRDEAAAAGLVTQLLLLVQSDCTERAKRKAQMLLKLLRD 400

[Close]

BLAST of Carg00144 vs. Swiss-Prot
Match: sp|Q5PNY6|PUB21_ARATH (U-box domain-containing protein 21 OS=Arabidopsis thaliana OX=3702 GN=PUB21 PE=2 SV=1)

HSP 1 Score: 362.8 bits (930), Expect = 5.2e-99
Identity = 204/425 (48.00%), Postives = 272/425 (64.00%), Query Frame = 0


Query: 14  AELTIPSHFLCPISLDLMKDPVTMSTGITYDRANIETWIEGGNFSCPFTNQPLHTIDSIP 73
           +E+TIP  F CPIS+DLMKDPV +STGITYDR +IETWI  GN +CP TN  L T D IP
Sbjct: 27  SEITIPPEFQCPISIDLMKDPVIISTGITYDRVSIETWINSGNKTCPVTNTVLTTFDQIP 86

Query: 74  NHNIRKMIQAWCVENRTHGIERIPTPRVPASPVQVREILDKIAAAVGREDCEGCKSLVEK 133
           NH IRKMIQ WCVE  +  I+RIPTPRVP  P +V EI  K+++A  R D E C  ++EK
Sbjct: 87  NHTIRKMIQGWCVEKGSPLIQRIPTPRVPLMPCEVYEISRKLSSATRRGDYEKCGVIIEK 146

Query: 134 IKILVQESERNKKCIIANGTGNVLSSAFEAFSKPERFEKRVEILEEILSTMAMIFPLQEE 193
           IK L  ESE+N+KC+  N  G VL   F+ FS     EK   +L EILS +  +FP+  E
Sbjct: 147 IKKLGDESEKNRKCVNENSVGWVLCDCFDKFSGD---EKLTFMLNEILSLLTWMFPIGLE 206

Query: 194 AIKHLKSEASMQALVWFVRGEDKSRRRSSILVLKEIISSYPEKVSELGEIQGVLEGLMKL 253
            I  L S  S + +   ++  D S R+++  ++KEI+S    +V       GV E L+KL
Sbjct: 207 GISKLASATSFRCVAGLLKSTDDSVRQNAAFIMKEILSLDETRVHSFAVENGVAEALVKL 266

Query: 254 IKEPICSSSKKASLFITYHAIASSSNQEGFTNAFLQMGLVPLLLETLVDAERSVCERALG 313
           I++ + SSS K+SL   Y  +          + FL++GLV + +E +VDAE SVCE+AL 
Sbjct: 267 IRDSVSSSSTKSSLIAIYQMVLQKPE---IASEFLEIGLVSITVEMIVDAENSVCEKALA 326

Query: 314 VFDGICETKQGREEAYAHALTMPVIVKKILRVSDLATELSVSIVWKLVKHESREXXXXXX 373
           V D ICET+ GREE   +AL MP++VKKI +VS+LAT  S+S++ KL K           
Sbjct: 327 VLDAICETEHGREEVRKNALVMPLLVKKIAKVSELATRSSMSMILKLWK----------T 386

Query: 374 XGGVKVE-ALQVGAFQKLLLLLQVGCSEWTKEKATELLKLLNNLHRERLECIDSL-DFKD 433
              V VE A+++GAFQK+LL+LQVG  E TKEKATELLK++N   +   +C+DSL +FK 
Sbjct: 387 GNTVAVEDAVRLGAFQKVLLVLQVGYGEETKEKATELLKMMNTQMKLMSDCVDSLKEFKY 435

Query: 434 LKRTF 437
           +K+ F
Sbjct: 447 IKKPF 435

[Close]

BLAST of Carg00144 vs. Swiss-Prot
Match: sp|Q9C8D1|PUB20_ARATH (U-box domain-containing protein 20 OS=Arabidopsis thaliana OX=3702 GN=PUB20 PE=2 SV=1)

HSP 1 Score: 305.4 bits (781), Expect = 9.8e-82
Identity = 181/426 (42.49%), Postives = 258/426 (60.56%), Query Frame = 0


Query: 15  ELTIPSHFLCPISLDLMKDPVTMSTGITYDRANIETWIEGGNFSCPFTNQPLHTIDSIPN 74
           E+TIPS F CPIS +LMKDPV +++GITYDR NIE W E G  +CP TN  L +++ IPN
Sbjct: 30  EITIPSQFQCPISYELMKDPVIIASGITYDRENIEKWFESGYQTCPVTNTVLTSLEQIPN 89

Query: 75  HNIRKMIQAWCVENRTHGIERIPTPRVPASPVQVREILDKIAAAVGREDCEGCKSLVEKI 134
           H IR+MIQ WC  +   GIERIPTPRVP +  QV EI ++++AA  R D   C  +V K+
Sbjct: 90  HTIRRMIQGWCGSSLGGGIERIPTPRVPVTSHQVSEICERLSAATRRGDYAACMEMVTKM 149

Query: 135 KILVQESERNKKCIIANGTGNVLSSAFEAFSKPERFEKRVEILEEILSTMAMIFPLQEEA 194
             L +ESERN+KC+  NG G VL   F+AFS+         +LEE +S +  + P+  E 
Sbjct: 150 TRLGKESERNRKCVKENGAGLVLCVCFDAFSENANASL---LLEETVSVLTWMLPIGLEG 209

Query: 195 IKHLKSEASMQALVWFVRGEDKSRRRSSILVLKEIISSYPEKVSELGEIQGVLEGLMKLI 254
              L + +S   LV  +R  D    +++  ++KE++      V  L +I GV E  MK I
Sbjct: 210 QSKLTTTSSFNRLVELLRNGD----QNAAFLIKELLELNVTHVHALTKINGVQEAFMKSI 269

Query: 255 KEPICSSSKKASLFITYHAIASSSNQEGFTNAFLQMGLVPLLLETLVDAERSVCERALGV 314
                 S+   SL   +H I   +NQE   + FL++ LV + +E LVD+E SVCE+AL V
Sbjct: 270 NR---DSTCVNSLISIHHMIL--TNQE-TVSRFLELDLVNITVEMLVDSENSVCEKALTV 329

Query: 315 FDGICETKQGREEAYAHALTMPVIVKKILRVSDLATELSVSIVWKLVKHESREXXXXXXX 374
            + ICETK+GRE+   + L +P++VKKIL++S+   +  VS++WK+ K            
Sbjct: 330 LNVICETKEGREKVRRNKLVIPILVKKILKISE--KKDLVSVMWKVCK---------SGD 389

Query: 375 GGVKVEALQVGAFQKLLLLLQVGCSEWTKEKATELLKLLNNLHRER----LECIDSLDFK 434
           G    EAL++GAF+KL+++LQVGC E TKEK TELLK++N + +           S++FK
Sbjct: 390 GSEVEEALRLGAFKKLVVMLQVGCGEGTKEKVTELLKMMNKVMKMNGFVDRSYSSSIEFK 431

Query: 435 DLKRTF 437
            +K+ F
Sbjct: 450 HVKKPF 431

[Close]

BLAST of Carg00144 vs. Swiss-Prot
Match: sp|Q9LT79|PUB25_ARATH (U-box domain-containing protein 25 OS=Arabidopsis thaliana OX=3702 GN=PUB25 PE=2 SV=1)

HSP 1 Score: 208.0 bits (528), Expect = 2.1e-52
Identity = 138/420 (32.86%), Postives = 219/420 (52.14%), Query Frame = 0


Query: 16  LTIPSHFLCPISLDLMKDPVTMSTGITYDRANIETWIE-GGNFSCPFTNQPLHTIDSIPN 75
           + IP HF CPISL+LM+DPVT+ TG TYDRA+IE+W+  G N +CP T  PL     IPN
Sbjct: 12  IQIPYHFRCPISLELMQDPVTVCTGQTYDRASIESWVSIGNNTTCPVTRAPLSDFTLIPN 71

Query: 76  HNIRKMIQAWCVENRTHGIERIPTPRVPASPVQVREILDKIAAAVGRE-DCEGCKSLVEK 135
           H +R++IQ WCV NR++G+ERIPTP+ PA P  VR +L + +A  G         + + +
Sbjct: 72  HTLRRLIQEWCVANRSNGVERIPTPKQPADPTSVRALLSQASAITGTHVSVRSRAAALRR 131

Query: 136 IKILVQESERNKKCIIANGTGNVLSSAFEAFSKPERFEKRVEILEEILSTMAMIFPLQEE 195
           ++   ++S++N+  I A+    +L      FS+        E++ E L+ + M+   +  
Sbjct: 132 LRGFARDSDKNRVLIAAHNATEILIKIL--FSE----TTSSELVSESLALLVMLPITEPN 191

Query: 196 AIKHLKSEASMQALVWFVRGEDKSRRRSSILVLKEIISSYPEKVSELGEI---QGVLEGL 255
               + S+      +  +  +     R +   L EI+S+  +     G I   + V EG+
Sbjct: 192 QFVSISSDPGRVEFLTRLLFDSSIETRVNAAALIEIVSTGTKSADLKGSISNSESVFEGV 251

Query: 256 MKLIKEPICSSSKKASLFITYHAIASSSNQEGFTNAFLQMGLVPLLLETL-VDAERSVCE 315
           + L++ PI   S + +L I    + +  + +   +  +  G   +L++ L  D +R   E
Sbjct: 252 LDLLRNPI---SSRRALKIGIKTLFALCSVKSTRHIAITAGAPEILIDRLAADFDRCDTE 311

Query: 316 RALGVFDGICETKQGREEAYAHALTMPVIVKKILRVSDLATELSVSIVWKLVKHESREXX 375
           RAL   + +C T +G      HALT+P++VK ILRVSD ATE +   +  L   E R   
Sbjct: 312 RALATVELLCRTPEGCAAFGEHALTVPLLVKTILRVSDRATEYAAGALLALCTAEER--- 371

Query: 376 XXXXXGGVKVEALQVGAFQKLLLLLQVGCSEWTKEKATELLKLLNNLHRERLECIDSLDF 430
                   + EA   G   +LLL++Q  C+E  K+KA +LLKLL +   +     +S DF
Sbjct: 372 -------WREEAAGAGVVVQLLLMVQSECTERAKKKAQKLLKLLRDSWPDYNSFANSDDF 412

[Close]

BLAST of Carg00144 vs. Swiss-Prot
Match: sp|Q9FXA4|PUB26_ARATH (U-box domain-containing protein 26 OS=Arabidopsis thaliana OX=3702 GN=PUB26 PE=2 SV=1)

HSP 1 Score: 204.5 bits (519), Expect = 2.4e-51
Identity = 136/405 (33.58%), Postives = 211/405 (52.10%), Query Frame = 0


Query: 16  LTIPSHFLCPISLDLMKDPVTMSTGITYDRANIETWIEGGNFSCPFTNQPLHTIDSIPNH 75
           + IP HF CPISLDLM DPVT+STG TYDR +I++WI  GN +CP T   L     IPNH
Sbjct: 12  IQIPYHFRCPISLDLMSDPVTISTGQTYDRTSIDSWIAMGNTTCPVTRVALSDFTLIPNH 71

Query: 76  NIRKMIQAWCVENRTHGIERIPTPRVPASPVQVREILDKIAAAVGRE-DCEGCKSLVEKI 135
            +R++IQ WCV NR++G+ERIPTP+ PA P+ VR +L + +A  G         + + ++
Sbjct: 72  TLRRLIQEWCVANRSNGVERIPTPKQPADPISVRSLLSQASAITGTHVSVRSRAAAIRRL 131

Query: 136 KILVQESERNKKCIIANGTGNVLSSAFEAFSKPERFEKRVEILEEILSTMAMIFPLQEEA 195
           + L ++SE+N+  I  +    +L      F+  E      E++ E L+ + ++  + E  
Sbjct: 132 RGLARDSEKNRVLIAGHNAREILVRIL--FADIETTSLSSELVSESLALLVLLH-MTETE 191

Query: 196 IKHLKSEASMQALVWFVRGEDKSRRRSSILVLKEIISSYPEKVSELGEIQG---VLEGLM 255
            + + S+ S    +  +  +     R +   L E++ +  + +     I G   + EG++
Sbjct: 192 CEAVASDPSRVGFMTRLLFDSSIEIRVNAAALIEMVLTGAKSMDLKLIISGSDSIFEGVL 251

Query: 256 KLIKEPICSSSKKASLFITYHAIASSSNQEGFTNAFLQMGLVPLLLETL-VDAERSVCER 315
            L+K PI   S + +L I   AI +    +   +  +  G   +L++ L  D +R   ER
Sbjct: 252 DLLKNPI---SSRRALKIGIKAIFALCLVKQTRHLAISAGAPGILIDRLAADFDRCDTER 311

Query: 316 ALGVFDGICETKQGREEAYAHALTMPVIVKKILRVSDLATELSVSIVWKLVKHESREXXX 375
            L   + +C   +G      HALT+P++VK ILRVSD ATE +   +  L   E R    
Sbjct: 312 GLATVELLCRLPEGCAAFGEHALTVPLMVKTILRVSDRATEYAAGALLALCTAEER---- 371

Query: 376 XXXXGGVKVEALQVGAFQKLLLLLQVGCSEWTKEKATELLKLLNN 416
                  + EA   G   +LLLL+Q  C+E  K KA  LLKLL +
Sbjct: 372 ------CRDEAAAAGLVTQLLLLVQSDCTERAKRKAQMLLKLLRD 400

[Close]

BLAST of Carg00144 vs. Swiss-Prot
Match: sp|Q9SVC6|PUB22_ARATH (E3 ubiquitin-protein ligase PUB22 OS=Arabidopsis thaliana OX=3702 GN=PUB22 PE=1 SV=1)

HSP 1 Score: 191.8 bits (486), Expect = 1.6e-47
Identity = 130/435 (29.89%), Postives = 225/435 (51.72%), Query Frame = 0


Query: 15  ELTIPSHFLCPISLDLMKDPVTMSTGITYDRANIETWI-EGGNFSCPFTNQPLHTIDSIP 74
           E+ IPS FLCPISLD+MKDPV +STGITYDR +IE W+  G   SCP T Q +   D  P
Sbjct: 4   EIEIPSFFLCPISLDIMKDPVIVSTGITYDRESIEKWLFSGKKNSCPVTKQVITETDLTP 63

Query: 75  NHNIRKMIQAWCVENRTHGIERIPTPRVPASPVQVREILDKIAAA-VGREDCEGCKSLVE 134
           NH +R++IQ+WC  N ++GIERIPTP+ P    ++ +++ + +++ + +  C      ++
Sbjct: 64  NHTLRRLIQSWCTLNASYGIERIPTPKPPICKSEIEKLIKESSSSHLNQVKC------LK 123

Query: 135 KIKILVQESERNKKCI----IANGTGNVLSSAFEAFSKP-------------------ER 194
           +++ +V E+  NK+C+    +     N++S++ + ++ P                    R
Sbjct: 124 RLRQIVSENTTNKRCLEAAEVPEFLANIVSNSVDTYNSPSSSLSSSNLNDMCQSNMLENR 183

Query: 195 FEKRVEILEEILSTMAMIFPLQEEAIKHLKSEASMQALVWFV-----RGEDKSRRRSSIL 254
           F+    +++E LS +  +    E A+K L +      LV  +     RG  +SR  +++L
Sbjct: 184 FDSSRSLMDEALSVLYHL-DTSETALKSLLNNKKGTNLVKTLTKIMQRGIYESRAYAALL 243

Query: 255 VLKEIISSYPEKVSELGEIQGVLEGLMKLIKEPICSSSKKASLFITYHAIASSSNQEGFT 314
           + K +  + P ++  L   + +   +++++ + I   + ++++ I         N+    
Sbjct: 244 LKKLLEVADPMQIILLE--RELFGEVIQILHDQISHKATRSAMQILVITCPWGRNRHKAV 303

Query: 315 NAFLQMGLVPLLLETLVDAERSVCERALGVFDGICETKQGREEAYAHALTMPVIVKKILR 374
                  ++ LL++    +ER   E A+ V D +C+  +GR E   H   + V+ KKILR
Sbjct: 304 EGGTISMIIELLMDDTFSSERRNSEMAMVVLDMLCQCAEGRAEFLNHGAAIAVVSKKILR 363

Query: 375 VSDLATELSVSIVWKLVKHESREXXXXXXXGGVKVEALQVGAFQKLLLLLQVGCSEWTKE 420
           VS + +E +V ++  + +              +  E LQ+G   KL L+LQV C   TKE
Sbjct: 364 VSQITSERAVRVLLSVGR--------FCATPSLLQEMLQLGVVAKLCLVLQVSCGNKTKE 421

[Close]

BLAST of Carg00144 vs. TrEMBL
Match: tr|A0A0A0KMI8|A0A0A0KMI8_CUCSA (RING-type E3 ubiquitin transferase OS=Cucumis sativus OX=3659 GN=Csa_5G023870 PE=4 SV=1)

HSP 1 Score: 703.4 bits (1814), Expect = 3.3e-199
Identity = 358/425 (84.24%), Postives = 384/425 (90.35%), Query Frame = 0


Query: 15  ELTIPSHFLCPISLDLMKDPVTMSTGITYDRANIETWIEGGNFSCPFTNQPLHTIDSIPN 74
           ELTIP+HF CPISLDLMKDPVT+STGITYDRA+IETWIEGGNF+CPFTNQPL TIDSIPN
Sbjct: 24  ELTIPTHFRCPISLDLMKDPVTLSTGITYDRASIETWIEGGNFTCPFTNQPLQTIDSIPN 83

Query: 75  HNIRKMIQAWCVENRTHGIERIPTPRVPASPVQVREILDKIAAAVGREDCEGCKSLVEKI 134
           HNIRKMIQ WCVENR +GIERIPTPRVPASP QVREIL+K+AAA  R DC+GCKS+VEKI
Sbjct: 84  HNIRKMIQDWCVENRAYGIERIPTPRVPASPAQVREILEKMAAAARRGDCDGCKSMVEKI 143

Query: 135 KILVQESERNKKCIIANGTGNVLSSAFEAFSKPERFEKRVEILEEILSTMAMIFPLQEEA 194
           K L +ESERNKKCIIANGTGN LSS FEAFS PE FEKR+EILEEILS M + FPLQEE+
Sbjct: 144 KKLGKESERNKKCIIANGTGNTLSSIFEAFSNPETFEKRIEILEEILSAMTVAFPLQEES 203

Query: 195 IKHLKSEASMQALVWFVRGEDKSRRRSSILVLKEIISSYPEKVSELGEIQGVLEGLMKLI 254
           IKHLKSE S+Q+LVWF++G D S RR+S+LVLKEIISSYPEKV ELGEIQG LEGL+KLI
Sbjct: 204 IKHLKSETSLQSLVWFLKGGDISGRRNSVLVLKEIISSYPEKVDELGEIQGALEGLIKLI 263

Query: 255 KEPICSSSKKASLFITYHAIA---SSSNQEGFTNAFLQMGLVPLLLETLVDAERSVCERA 314
           K+PICSSS+KASLFITYH IA   SSSN+E FT   LQMGLV LLLETLVDAERSVCERA
Sbjct: 264 KDPICSSSRKASLFITYHVIASTSSSSNRERFTKELLQMGLVSLLLETLVDAERSVCERA 323

Query: 315 LGVFDGICETKQGREEAYAHALTMPVIVKKILRVSDLATELSVSIVWKLVKHESREXXXX 374
           LG FDGICETKQGREEAYAHALTMPVIVKKILRVSDLATELSV IVWKLVKHES+E    
Sbjct: 324 LGAFDGICETKQGREEAYAHALTMPVIVKKILRVSDLATELSVCIVWKLVKHESKE---- 383

Query: 375 XXXGGVKVEALQVGAFQKLLLLLQVGCSEWTKEKATELLKLLNNLHRERLECIDSLDFKD 434
              GG+KVEALQVGAFQKLLLLLQVGCSEWTKEKATELLKLLNNLHR+RLECIDSLDFKD
Sbjct: 384 EEDGGIKVEALQVGAFQKLLLLLQVGCSEWTKEKATELLKLLNNLHRDRLECIDSLDFKD 443

Query: 435 LKRTF 437
           LKRTF
Sbjct: 444 LKRTF 444

[Close]

BLAST of Carg00144 vs. TrEMBL
Match: tr|A0A1S3CPH4|A0A1S3CPH4_CUCME (RING-type E3 ubiquitin transferase OS=Cucumis melo OX=3656 GN=LOC103503164 PE=4 SV=1)

HSP 1 Score: 694.5 bits (1791), Expect = 1.5e-196
Identity = 355/425 (83.53%), Postives = 381/425 (89.65%), Query Frame = 0


Query: 15  ELTIPSHFLCPISLDLMKDPVTMSTGITYDRANIETWIEGGNFSCPFTNQPLHTIDSIPN 74
           ELTIP+HF CPISLDLMKDPVT+STGITYDRA+IETWIEGGNF+CPFTNQPL TIDSIPN
Sbjct: 24  ELTIPTHFRCPISLDLMKDPVTLSTGITYDRASIETWIEGGNFTCPFTNQPLQTIDSIPN 83

Query: 75  HNIRKMIQAWCVENRTHGIERIPTPRVPASPVQVREILDKIAAAVGREDCEGCKSLVEKI 134
           HNIRKMIQ WCVENR +GIERIPTPRVPASP QVR+IL+K+ AA  R D EGCKS+VEKI
Sbjct: 84  HNIRKMIQDWCVENRAYGIERIPTPRVPASPAQVRDILEKMTAAARRGDFEGCKSMVEKI 143

Query: 135 KILVQESERNKKCIIANGTGNVLSSAFEAFSKPERFEKRVEILEEILSTMAMIFPLQEEA 194
           K L +ESERNKKCIIANGTGN  SS FEAFS PE FEKR+EILEEILS M M+FPLQEE+
Sbjct: 144 KNLGKESERNKKCIIANGTGNTFSSIFEAFSNPETFEKRIEILEEILSAMTMVFPLQEES 203

Query: 195 IKHLKSEASMQALVWFVRGEDKSRRRSSILVLKEIISSYPEKVSELGEIQGVLEGLMKLI 254
           IKHLKSE S+Q+L WF++G D S RR+S+LVLKEIISSYPEKV ELG IQG LEGL+KLI
Sbjct: 204 IKHLKSETSLQSLAWFLKGGDISGRRNSVLVLKEIISSYPEKVDELGVIQGALEGLIKLI 263

Query: 255 KEPICSSSKKASLFITYHAIA---SSSNQEGFTNAFLQMGLVPLLLETLVDAERSVCERA 314
           K+PICSSSKKASLFITYH IA   SSSNQ  FT A LQMGLV LLLETLVDAERSVCERA
Sbjct: 264 KDPICSSSKKASLFITYHVIASTSSSSNQGRFTKALLQMGLVSLLLETLVDAERSVCERA 323

Query: 315 LGVFDGICETKQGREEAYAHALTMPVIVKKILRVSDLATELSVSIVWKLVKHESREXXXX 374
           LG FDGICETKQGREEAYAHALTMPVIVKKILRVSDLATELSVSIVWKLVK+ES+E    
Sbjct: 324 LGAFDGICETKQGREEAYAHALTMPVIVKKILRVSDLATELSVSIVWKLVKNESKE---E 383

Query: 375 XXXGGVKVEALQVGAFQKLLLLLQVGCSEWTKEKATELLKLLNNLHRERLECIDSLDFKD 434
              GG++VEALQVGAFQKLLLLLQVGCSEWTKEKATELLKLLNNLHR+RLECIDSLDFKD
Sbjct: 384 KEDGGIEVEALQVGAFQKLLLLLQVGCSEWTKEKATELLKLLNNLHRDRLECIDSLDFKD 443

Query: 435 LKRTF 437
           LKRTF
Sbjct: 444 LKRTF 445

[Close]

BLAST of Carg00144 vs. TrEMBL
Match: tr|A0A2I4G200|A0A2I4G200_9ROSI (RING-type E3 ubiquitin transferase OS=Juglans regia OX=51240 GN=LOC109003997 PE=4 SV=1)

HSP 1 Score: 516.9 bits (1330), Expect = 4.3e-143
Identity = 273/424 (64.39%), Postives = 331/424 (78.07%), Query Frame = 0


Query: 14  AELTIPSHFLCPISLDLMKDPVTMSTGITYDRANIETWIEGGNFSCPFTNQPLHTIDSIP 73
           +ELTIP+HF C ISLDLMKDPVT+STGITYDR +IETWIE GN +CP +NQ L +++ IP
Sbjct: 26  SELTIPTHFRCSISLDLMKDPVTLSTGITYDRESIETWIEAGNKTCPISNQALKSLEPIP 85

Query: 74  NHNIRKMIQAWCVENRTHGIERIPTPRVPASPVQVREILDKIAAAVGREDCEGCKSLVEK 133
           NH IRKMIQ WCV+N+++GIERIPTPR+P S V V EIL +I  A  R D E C  LV K
Sbjct: 86  NHAIRKMIQDWCVDNQSYGIERIPTPRIPVSSVVVAEILSEITMASKRGDQEVCLQLVAK 145

Query: 134 IKILVQESERNKKCIIANGTGNVLSSAFEAFSKPERFEKRVEILEEILSTMAMIFPLQEE 193
           IK L +ESERNK+CI+AN TG++LS+AFE F+K   F +   +LEEILS +A++FPL  E
Sbjct: 146 IKALWKESERNKRCIMANNTGSLLSAAFETFAKAS-FNRNDAVLEEILSALALLFPLDGE 205

Query: 194 AIKHLKSEASMQALVWFVRGEDKSRRRSSILVLKEIISSYPEKVSELGEIQGVLEGLMKL 253
           A+  L S AS+  +V F++G D S RR+++L LKEI+SS   KV+ L EI+G LE L+KL
Sbjct: 206 AMSCLGSAASLHCMVRFLKGGDLSGRRNAVLALKEILSSDERKVNALSEIEGSLEALVKL 265

Query: 254 IKEPICSSSKKASLFITYHAIASSSNQEGFTNAFLQMGLVPLLLETLVDAERSVCERALG 313
           IKEPIC SS KASL   YH + SS  +E     F++MGLV LLLE LVDAERS+CE+ALG
Sbjct: 266 IKEPICPSSTKASLMAIYHVVNSSFPKETIVERFVEMGLVSLLLEMLVDAERSICEKALG 325

Query: 314 VFDGICETKQGREEAYAHALTMPVIVKKILRVSDLATELSVSIVWKLVKHESREXXXXXX 373
           + DGIC +++GRE+ Y HALT+PV+VKKILRVSDLATE SVSI+W+L K+E RE      
Sbjct: 326 ILDGICRSEKGREKPYDHALTIPVLVKKILRVSDLATEFSVSIIWELCKNEKRE------ 385

Query: 374 XGGVKV-EALQVGAFQKLLLLLQVGCSEWTKEKATELLKLLNNLHRERLECIDSLDFKDL 433
            GGV V EALQVGAFQKLLLLLQVGC+E TKEKATELLKLL NLHR+RLECIDS+DFKDL
Sbjct: 386 EGGVLVLEALQVGAFQKLLLLLQVGCAERTKEKATELLKLL-NLHRDRLECIDSMDFKDL 441

Query: 434 KRTF 437
           KR F
Sbjct: 446 KRPF 441

[Close]

BLAST of Carg00144 vs. TrEMBL
Match: tr|A0A2I4EWZ8|A0A2I4EWZ8_9ROSI (RING-type E3 ubiquitin transferase OS=Juglans regia OX=51240 GN=LOC108993446 PE=4 SV=1)

HSP 1 Score: 508.1 bits (1307), Expect = 2.0e-140
Identity = 262/423 (61.94%), Postives = 323/423 (76.36%), Query Frame = 0


Query: 15  ELTIPSHFLCPISLDLMKDPVTMSTGITYDRANIETWIEGGNFSCPFTNQPLHTIDSIPN 74
           ELTIP HF CPISLDLMKDPVT STGITYDR +IETW+E GN +CP TNQ L +++ IPN
Sbjct: 27  ELTIPGHFRCPISLDLMKDPVTFSTGITYDRESIETWLEAGNQTCPITNQELKSLEPIPN 86

Query: 75  HNIRKMIQAWCVENRTHGIERIPTPRVPASPVQVREILDKIAAAVGREDCEGCKSLVEKI 134
           H IRKMIQ WCVEN +HGIERIPTPR+P +  QV E+L KI  A   ED  GC  LV K+
Sbjct: 87  HAIRKMIQDWCVENGSHGIERIPTPRIPVTSAQVSELLRKITMASELEDQAGCLKLVTKL 146

Query: 135 KILVQESERNKKCIIANGTGNVLSSAFEAFSKPERFEKRVEILEEILSTMAMIFPLQEEA 194
           K L +ES+RNK+CI+AN TG+VLS+AF+ FSK   F++   +LEEILST+A++FPL  EA
Sbjct: 147 KALAKESDRNKRCIVANTTGSVLSAAFDIFSKVS-FDRNAAVLEEILSTLALLFPLDREA 206

Query: 195 IKHLKSEASMQALVWFVRGEDKSRRRSSILVLKEIISSYPEKVSELGEIQGVLEGLMKLI 254
             +L+S AS+  + WF++  D S RR+S+L LK+++S    +V    +I+G LE L+KLI
Sbjct: 207 KSYLQSSASLHCMAWFLKCGDLSGRRNSVLALKDVLSLDESRVESFSKIEGALEALVKLI 266

Query: 255 KEPICSSSKKASLFITYHAIASSSNQEGFTNAFLQMGLVPLLLETLVDAERSVCERALGV 314
           KEPIC ++ KASL + YH ++ S   E     F+ MGLV LLLE LVD ERS+CE+A GV
Sbjct: 267 KEPICPTATKASLMVIYHMVSRSFPNEAIIERFVDMGLVSLLLELLVDNERSMCEKAEGV 326

Query: 315 FDGICETKQGREEAYAHALTMPVIVKKILRVSDLATELSVSIVWKLV-KHESREXXXXXX 374
            DGIC ++QG E+AY HALTMPV+VKKILRVSDLATE SVSI+WKL+ K+E RE      
Sbjct: 327 LDGICSSEQGIEKAYNHALTMPVLVKKILRVSDLATEFSVSILWKLICKNEKREEASV-- 386

Query: 375 XGGVKVEALQVGAFQKLLLLLQVGCSEWTKEKATELLKLLNNLHRERLECIDSLDFKDLK 434
              V VEALQVGAFQKLLLLLQVGC++ TKEKATELLKLL NLHR+RLEC++S+DFK+LK
Sbjct: 387 ---VVVEALQVGAFQKLLLLLQVGCADRTKEKATELLKLL-NLHRDRLECVESMDFKNLK 442

Query: 435 RTF 437
           R F
Sbjct: 447 RHF 442

[Close]

BLAST of Carg00144 vs. TrEMBL
Match: tr|F6HFB5|F6HFB5_VITVI (RING-type E3 ubiquitin transferase OS=Vitis vinifera OX=29760 GN=VIT_01s0011g06140 PE=4 SV=1)

HSP 1 Score: 506.9 bits (1304), Expect = 4.5e-140
Identity = 262/422 (62.09%), Postives = 320/422 (75.83%), Query Frame = 0


Query: 15  ELTIPSHFLCPISLDLMKDPVTMSTGITYDRANIETWIEGGNFSCPFTNQPLHTIDSIPN 74
           ELT P+HF CPISLDLMKDPVT+STGITYDR +IE WIE GN +CP TNQ L +++ IPN
Sbjct: 29  ELTTPNHFRCPISLDLMKDPVTLSTGITYDRESIEMWIEAGNRTCPITNQVLRSLEPIPN 88

Query: 75  HNIRKMIQAWCVENRTHGIERIPTPRVPASPVQVREILDKIAAAVGREDCEGCKSLVEKI 134
           H IRKMIQ WCVENR+ GIERIPTPR+P S V+V ++L K   A  RED  GC+ LV K+
Sbjct: 89  HTIRKMIQDWCVENRSFGIERIPTPRIPLSSVEVTDMLSKFKMAYRREDEAGCRELVAKM 148

Query: 135 KILVQESERNKKCIIANGTGNVLSSAFEAFSKPERFEKRVEILEEILSTMAMIFPLQEEA 194
           K   +ESERNK+CI+ NG   VLS+AFEAFS    F+K V +LE+IL+ +  + PL  EA
Sbjct: 149 KSKGKESERNKRCIVINGAAGVLSAAFEAFSSAS-FDKYVAVLEDILAALTWMSPLDGEA 208

Query: 195 IKHLKSEASMQALVWFVRGEDKSRRRSSILVLKEIISSYPEKVSELGEIQGVLEGLMKLI 254
             +L S AS+  LVW ++  D S R +++  LKE++SS   KV  L EI+G  E L+KL+
Sbjct: 209 KSYLSSAASLNCLVWLLKSGDLSARGNAVSTLKELLSSDKRKVYALSEIEGAKEALVKLV 268

Query: 255 KEPICSSSKKASLFITYHAIASSSNQEGFTNAFLQMGLVPLLLETLVDAERSVCERALGV 314
           KEPIC ++ K SL + +H ++SS + E     F++MGLV LLLE LVD+E+SVCE+ALGV
Sbjct: 269 KEPICPTATKTSLVVIFHMVSSSPSNEDTKVRFVEMGLVELLLELLVDSEKSVCEKALGV 328

Query: 315 FDGICETKQGREEAYAHALTMPVIVKKILRVSDLATELSVSIVWKLVKHESREXXXXXXX 374
            DGIC  ++GRE+AY HALTMPV+VKK+LRVSDLATE SVSI+WKL K+E RE       
Sbjct: 329 LDGICGCEEGREKAYGHALTMPVLVKKLLRVSDLATEFSVSILWKLSKNEKRE------D 388

Query: 375 GGVKVEALQVGAFQKLLLLLQVGCSEWTKEKATELLKLLNNLHRERLECIDSLDFKDLKR 434
           G V VEALQVGAFQKLLLLLQVGCS+ TKEKATELLKLL N+HRERLECIDS+DFKDLKR
Sbjct: 389 GSVLVEALQVGAFQKLLLLLQVGCSDRTKEKATELLKLL-NIHRERLECIDSMDFKDLKR 442

Query: 435 TF 437
            F
Sbjct: 449 PF 442

The following BLAST results are available for this feature:

BLAST of Carg00144 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022942676.1	7.8e-229	97.41	U-box domain-containing protein 21-like [Cucurbita moschata]	[more]
XP_023514876.1	1.3e-228	97.17	U-box domain-containing protein 21-like [Cucurbita pepo subsp. pepo]	[more]
XP_022996865.1	9.6e-227	96.23	U-box domain-containing protein 21-like [Cucurbita maxima]	[more]
XP_004142305.1	4.9e-199	84.24	PREDICTED: U-box domain-containing protein 21-like [Cucumis sativus] >KGN49607.1...	[more]
XP_008465536.1	2.3e-196	83.53	PREDICTED: U-box domain-containing protein 21-like [Cucumis melo]	[more]

BLAST of Carg00144 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G37490.1	2.9e-100	48.00	ARM repeat superfamily protein	[more]
AT1G66160.1	5.4e-83	42.49	CYS, MET, PRO, and GLY protein 1	[more]
AT3G02840.1	5.1e-65	42.12	ARM repeat superfamily protein	[more]
AT3G19380.1	1.2e-53	32.86	plant U-box 25	[more]
AT1G49780.1	1.3e-52	33.58	plant U-box 26	[more]

BLAST of Carg00144 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q5PNY6\|PUB21_ARATH	5.2e-99	48.00	U-box domain-containing protein 21 OS=Arabidopsis thaliana OX=3702 GN=PUB21 PE=2...	[more]
sp\|Q9C8D1\|PUB20_ARATH	9.8e-82	42.49	U-box domain-containing protein 20 OS=Arabidopsis thaliana OX=3702 GN=PUB20 PE=2...	[more]
sp\|Q9LT79\|PUB25_ARATH	2.1e-52	32.86	U-box domain-containing protein 25 OS=Arabidopsis thaliana OX=3702 GN=PUB25 PE=2...	[more]
sp\|Q9FXA4\|PUB26_ARATH	2.4e-51	33.58	U-box domain-containing protein 26 OS=Arabidopsis thaliana OX=3702 GN=PUB26 PE=2...	[more]
sp\|Q9SVC6\|PUB22_ARATH	1.6e-47	29.89	E3 ubiquitin-protein ligase PUB22 OS=Arabidopsis thaliana OX=3702 GN=PUB22 PE=1 ...	[more]

BLAST of Carg00144 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KMI8\|A0A0A0KMI8_CUCSA	3.3e-199	84.24	RING-type E3 ubiquitin transferase OS=Cucumis sativus OX=3659 GN=Csa_5G023870 PE...	[more]
tr\|A0A1S3CPH4\|A0A1S3CPH4_CUCME	1.5e-196	83.53	RING-type E3 ubiquitin transferase OS=Cucumis melo OX=3656 GN=LOC103503164 PE=4 ...	[more]
tr\|A0A2I4G200\|A0A2I4G200_9ROSI	4.3e-143	64.39	RING-type E3 ubiquitin transferase OS=Juglans regia OX=51240 GN=LOC109003997 PE=...	[more]
tr\|A0A2I4EWZ8\|A0A2I4EWZ8_9ROSI	2.0e-140	61.94	RING-type E3 ubiquitin transferase OS=Juglans regia OX=51240 GN=LOC108993446 PE=...	[more]
tr\|F6HFB5\|F6HFB5_VITVI	4.5e-140	62.09	RING-type E3 ubiquitin transferase OS=Vitis vinifera OX=29760 GN=VIT_01s0011g061...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005488	binding
GO:0004842	ubiquitin-protein transferase activity

Vocabulary: **Biological Process**
Term	Definition
GO:0016567	protein ubiquitination

Vocabulary: **INTERPRO**
Term	Definition
IPR016024	ARM-type_fold
IPR013083	Znf_RING/FYVE/PHD
IPR011989	ARM-like
IPR003613	Ubox_domain

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016567	protein ubiquitination
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005488	binding
molecular_function	GO:0004842	ubiquitin-protein transferase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg00144-RA	Carg00144-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003613	U box domain	SMART	SM00504	Ubox_2	coord: 21..84 e-value: 2.8E-28 score: 110.0
IPR003613	U box domain	PFAM	PF04564	U-box	coord: 18..89 e-value: 5.3E-20 score: 71.3
IPR003613	U box domain	PROSITE	PS51698	U_BOX	coord: 17..91 score: 35.632
IPR011989	Armadillo-like helical	GENE3D	G3DSA:1.25.10.10		coord: 103..427 e-value: 4.8E-12 score: 47.2
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	G3DSA:3.30.40.10		coord: 17..91 e-value: 8.8E-28 score: 98.2
None	No IPR available	PANTHER	PTHR22849	WDSAM1 PROTEIN	coord: 15..436
None	No IPR available	PANTHER	PTHR22849:SF102	SUBFAMILY NOT NAMED	coord: 15..436
None	No IPR available	CDD	cd16664	RING-Ubox_PUB	coord: 22..64 e-value: 4.15435E-22 score: 88.0594
None	No IPR available	SUPERFAMILY	SSF57850	RING/U-box	coord: 11..94
IPR016024	Armadillo-type fold	SUPERFAMILY	SSF48371	ARM repeat	coord: 122..342 coord: 376..416

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg00144	Cla002204	Watermelon (97103) v1	carwmB0665
Carg00144	Csa5G023870	Cucumber (Chinese Long) v2	carcuB0692
Carg00144	ClCG07G005470	Watermelon (Charleston Gray)	carwcgB0651
Carg00144	CSPI05G00620	Wild cucumber (PI 183967)	carcpiB0704
Carg00144	Cucsa.174070	Cucumber (Gy14) v1	carcgyB0747
Carg00144	CmaCh04G000810	Cucurbita maxima (Rimu)	carcmaB0949
Carg00144	CmaCh04G010360	Cucurbita maxima (Rimu)	carcmaB0948
Carg00144	CmoCh04G011070	Cucurbita moschata (Rifu)	carcmoB0923
Carg00144	CmoCh04G000790	Cucurbita moschata (Rifu)	carcmoB0924
Carg00144	Lsi04G009910	Bottle gourd (USVL1VR-Ls)	carlsiB605
Carg00144	Cp4.1LG01g05930	Cucurbita pepo (Zucchini)	carcpeB0939
Carg00144	Cp4.1LG01g07360	Cucurbita pepo (Zucchini)	carcpeB0938
Carg00144	CsGy5G010880	Cucumber (Gy14) v2	carcgybB0667
Carg00144	CsaV3_5G014460	Cucumber (Chinese Long) v3	carcucB0705
Carg00144	Cla97C07G133790	Watermelon (97103) v2	carwmbB0700
Carg00144	Bhi07G000373	Wax gourd	carwgoB0785

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg00144	Carg27436	Silver-seed gourd	carcarB571

The following block(s) are covering this gene:


Gene	Organism	Block
Carg00144	Melon (DHL92) v3.5.1	carmeB0675
Carg00144	Melon (DHL92) v3.6.1	carmedB0687
Carg00144	Watermelon (97103) v1	carwmB0667