Carg00063 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg00063
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Kua-ubiquitin conjugating enzyme hybrid, localization
Location	Cucurbita_argyrosperma_scaffold_001 : 267014 .. 267970 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCGATCTTAGTTCAAAACAAGTTCCTATTGAGCTCCAAAACACATGTTAGCCTGTGGAGCCCTGCGATTCAACGCAAATTTGTCTGCTGCATAGCCAATACCACAGTCAATGTTGCTGCTGCTACCACCGCCGCCGCCAAACCCAAGCACGGTGATGGCCAACTAGTCATTGAACGAGAGCCTTTATCTCCTACTACACCTGTATTGCCCAATTCCTCCACCTATTATTCTGTTCTTAATGATCCCAGTTTACAATCGACCTGGAGTCATCGTGTGTGGGTGACAAGTGGGTGCACCATAGTGCTAATCTCTTTAGCAAAATCAATAGCAGGTGCAGCCAGTACACATACCTGGCTTGAGCCTGCTTTAGCAGCATTGGTAGGCTACATTTTAGCTGACCTTGGATCTGGGGTTTACCATTGGGGCATCGATAACTATGGCGACGCCTCAACTCCAATTTTTGGCACCCAAATAGAAGCATTCCAAGGCCATCATAAGCGGCCATGGACAATCACAAAGCGTCAATTTGCCAACAATCTGTATGCTTTGGCACGAGCTGTGACTTTCACTGTACTTCCTATAACCCTTGCATTTAATGACCCTATTCTTCATGGTTTCGTTGCCGTATGCTCAGGCTGTATAATGTTCAGCCAACAGTTCCATGCATGGGCTCACGACAAAAAGAGTCAACTACCACCACTCGTAGTAGCAATGCAAGATGCTGGCCTGCTAGTGTCGCGATTGCAGCATTCTGCACATCATCGTCCACCCTATAACAACAACTACTGCATAGTAAGCGGAATTTGGAATAAGCTTTTAGATGAAACAAGGGTTTTTGAGGCATTAGAGATGATCCTGTTCTTCAAGCTTGGGGTGAGACCAAGATCTTGGACCGAGCCTCATTCCGAATGGACAGAAGAGACTGAGATTATAGAACAAACTACAGCATATTAA

mRNA sequence

ATGTCGATCTTAGTTCAAAACAAGTTCCTATTGAGCTCCAAAACACATGTTAGCCTGTGGAGCCCTGCGATTCAACGCAAATTTGTCTGCTGCATAGCCAATACCACAGTCAATGTTGCTGCTGCTACCACCGCCGCCGCCAAACCCAAGCACGGTGATGGCCAACTAGTCATTGAACGAGAGCCTTTATCTCCTACTACACCTGTATTGCCCAATTCCTCCACCTATTATTCTGTTCTTAATGATCCCAGTTTACAATCGACCTGGAGTCATCGTGTGTGGGTGACAAGTGGGTGCACCATAGTGCTAATCTCTTTAGCAAAATCAATAGCAGGTGCAGCCAGTACACATACCTGGCTTGAGCCTGCTTTAGCAGCATTGGTAGGCTACATTTTAGCTGACCTTGGATCTGGGGTTTACCATTGGGGCATCGATAACTATGGCGACGCCTCAACTCCAATTTTTGGCACCCAAATAGAAGCATTCCAAGGCCATCATAAGCGGCCATGGACAATCACAAAGCGTCAATTTGCCAACAATCTGTATGCTTTGGCACGAGCTGTGACTTTCACTGTACTTCCTATAACCCTTGCATTTAATGACCCTATTCTTCATGGTTTCGTTGCCGTATGCTCAGGCTGTATAATGTTCAGCCAACAGTTCCATGCATGGGCTCACGACAAAAAGAGTCAACTACCACCACTCGTAGTAGCAATGCAAGATGCTGGCCTGCTAGTGTCGCGATTGCAGCATTCTGCACATCATCGTCCACCCTATAACAACAACTACTGCATAGTAAGCGGAATTTGGAATAAGCTTTTAGATGAAACAAGGGTTTTTGAGGCATTAGAGATGATCCTGTTCTTCAAGCTTGGGGTGAGACCAAGATCTTGGACCGAGCCTCATTCCGAATGGACAGAAGAGACTGAGATTATAGAACAAACTACAGCATATTAA

Coding sequence (CDS)

ATGTCGATCTTAGTTCAAAACAAGTTCCTATTGAGCTCCAAAACACATGTTAGCCTGTGGAGCCCTGCGATTCAACGCAAATTTGTCTGCTGCATAGCCAATACCACAGTCAATGTTGCTGCTGCTACCACCGCCGCCGCCAAACCCAAGCACGGTGATGGCCAACTAGTCATTGAACGAGAGCCTTTATCTCCTACTACACCTGTATTGCCCAATTCCTCCACCTATTATTCTGTTCTTAATGATCCCAGTTTACAATCGACCTGGAGTCATCGTGTGTGGGTGACAAGTGGGTGCACCATAGTGCTAATCTCTTTAGCAAAATCAATAGCAGGTGCAGCCAGTACACATACCTGGCTTGAGCCTGCTTTAGCAGCATTGGTAGGCTACATTTTAGCTGACCTTGGATCTGGGGTTTACCATTGGGGCATCGATAACTATGGCGACGCCTCAACTCCAATTTTTGGCACCCAAATAGAAGCATTCCAAGGCCATCATAAGCGGCCATGGACAATCACAAAGCGTCAATTTGCCAACAATCTGTATGCTTTGGCACGAGCTGTGACTTTCACTGTACTTCCTATAACCCTTGCATTTAATGACCCTATTCTTCATGGTTTCGTTGCCGTATGCTCAGGCTGTATAATGTTCAGCCAACAGTTCCATGCATGGGCTCACGACAAAAAGAGTCAACTACCACCACTCGTAGTAGCAATGCAAGATGCTGGCCTGCTAGTGTCGCGATTGCAGCATTCTGCACATCATCGTCCACCCTATAACAACAACTACTGCATAGTAAGCGGAATTTGGAATAAGCTTTTAGATGAAACAAGGGTTTTTGAGGCATTAGAGATGATCCTGTTCTTCAAGCTTGGGGTGAGACCAAGATCTTGGACCGAGCCTCATTCCGAATGGACAGAAGAGACTGAGATTATAGAACAAACTACAGCATATTAA

Protein sequence

MSILVQNKFLLSSKTHVSLWSPAIQRKFVCCIANTTVNVAAATTAAAKPKHGDGQLVIEREPLSPTTPVLPNSSTYYSVLNDPSLQSTWSHRVWVTSGCTIVLISLAKSIAGAASTHTWLEPALAALVGYILADLGSGVYHWGIDNYGDASTPIFGTQIEAFQGHHKRPWTITKRQFANNLYALARAVTFTVLPITLAFNDPILHGFVAVCSGCIMFSQQFHAWAHDKKSQLPPLVVAMQDAGLLVSRLQHSAHHRPPYNNNYCIVSGIWNKLLDETRVFEALEMILFFKLGVRPRSWTEPHSEWTEETEIIEQTTAY

Homology

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BLAST of Carg00063 vs. NCBI nr
Match: XP_022943161.1 (fatty acid desaturase 4, chloroplastic [Cucurbita moschata])

HSP 1 Score: 651.7 bits (1680), Expect = 1.2e-183
Identity = 317/318 (99.69%), Postives = 317/318 (99.69%), Query Frame = 0


Query: 1   MSILVQNKFLLSSKTHVSLWSPAIQRKFVCCIANTTVNVAAATTAAAKPKHGDGQLVIER 60
           MSILVQNKFLLSSKTHVSLWSPAIQRKFVCCIANTTVNVAAATTAAAKPKHGDGQLVIER
Sbjct: 1   MSILVQNKFLLSSKTHVSLWSPAIQRKFVCCIANTTVNVAAATTAAAKPKHGDGQLVIER 60

Query: 61  EPLSPTTPVLPNSSTYYSVLNDPSLQSTWSHRVWVTSGCTIVLISLAKSIAGAASTHTWL 120
           EPLSPTTPVLPNSSTYYSVLNDPSLQSTWSHRVWVTSGCTIVLISLAKSIAGAASTHTWL
Sbjct: 61  EPLSPTTPVLPNSSTYYSVLNDPSLQSTWSHRVWVTSGCTIVLISLAKSIAGAASTHTWL 120

Query: 121 EPALAALVGYILADLGSGVYHWGIDNYGDASTPIFGTQIEAFQGHHKRPWTITKRQFANN 180
           EPALAALVGYILADLGSGVYHWGIDNYGD STPIFGTQIEAFQGHHKRPWTITKRQFANN
Sbjct: 121 EPALAALVGYILADLGSGVYHWGIDNYGDPSTPIFGTQIEAFQGHHKRPWTITKRQFANN 180

Query: 181 LYALARAVTFTVLPITLAFNDPILHGFVAVCSGCIMFSQQFHAWAHDKKSQLPPLVVAMQ 240
           LYALARAVTFTVLPITLAFNDPILHGFVAVCSGCIMFSQQFHAWAHDKKSQLPPLVVAMQ
Sbjct: 181 LYALARAVTFTVLPITLAFNDPILHGFVAVCSGCIMFSQQFHAWAHDKKSQLPPLVVAMQ 240

Query: 241 DAGLLVSRLQHSAHHRPPYNNNYCIVSGIWNKLLDETRVFEALEMILFFKLGVRPRSWTE 300
           DAGLLVSRLQHSAHHRPPYNNNYCIVSGIWNKLLDETRVFEALEMILFFKLGVRPRSWTE
Sbjct: 241 DAGLLVSRLQHSAHHRPPYNNNYCIVSGIWNKLLDETRVFEALEMILFFKLGVRPRSWTE 300

Query: 301 PHSEWTEETEIIEQTTAY 319
           PHSEWTEETEIIEQTTAY
Sbjct: 301 PHSEWTEETEIIEQTTAY 318

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BLAST of Carg00063 vs. NCBI nr
Match: XP_022976256.1 (fatty acid desaturase 4, chloroplastic [Cucurbita maxima])

HSP 1 Score: 645.6 bits (1664), Expect = 8.9e-182
Identity = 313/318 (98.43%), Postives = 316/318 (99.37%), Query Frame = 0


Query: 1   MSILVQNKFLLSSKTHVSLWSPAIQRKFVCCIANTTVNVAAATTAAAKPKHGDGQLVIER 60
           MSILVQNKFLLSSKTHVSLWSPA+ RKFVCCIANTTVNVAAATTAAAKPKHGDGQLVIER
Sbjct: 1   MSILVQNKFLLSSKTHVSLWSPAVPRKFVCCIANTTVNVAAATTAAAKPKHGDGQLVIER 60

Query: 61  EPLSPTTPVLPNSSTYYSVLNDPSLQSTWSHRVWVTSGCTIVLISLAKSIAGAASTHTWL 120
           EPLSPTTPVLPNSSTYYSVLNDPSLQSTWSHRVWVTSGCTIVLISLAKSIAGAAS+HTWL
Sbjct: 61  EPLSPTTPVLPNSSTYYSVLNDPSLQSTWSHRVWVTSGCTIVLISLAKSIAGAASSHTWL 120

Query: 121 EPALAALVGYILADLGSGVYHWGIDNYGDASTPIFGTQIEAFQGHHKRPWTITKRQFANN 180
           EPALAALVGYILADLGSGVYHWGIDNYGDASTPIFGTQIEAFQGHHKRPWTITKRQFANN
Sbjct: 121 EPALAALVGYILADLGSGVYHWGIDNYGDASTPIFGTQIEAFQGHHKRPWTITKRQFANN 180

Query: 181 LYALARAVTFTVLPITLAFNDPILHGFVAVCSGCIMFSQQFHAWAHDKKSQLPPLVVAMQ 240
           LYALARAVTFTVLPITLA NDPILHGFVAVCSGCIMFSQQFHAWAHDKKSQLPPLVVAMQ
Sbjct: 181 LYALARAVTFTVLPITLAVNDPILHGFVAVCSGCIMFSQQFHAWAHDKKSQLPPLVVAMQ 240

Query: 241 DAGLLVSRLQHSAHHRPPYNNNYCIVSGIWNKLLDETRVFEALEMILFFKLGVRPRSWTE 300
           DAGLLVSRLQHSAHHRPPYNNNYCIVSGIWNKLLDET+VFEALEMILFFKLGVRPRSWTE
Sbjct: 241 DAGLLVSRLQHSAHHRPPYNNNYCIVSGIWNKLLDETKVFEALEMILFFKLGVRPRSWTE 300

Query: 301 PHSEWTEETEIIEQTTAY 319
           PHSEWTEETEIIEQTTAY
Sbjct: 301 PHSEWTEETEIIEQTTAY 318

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BLAST of Carg00063 vs. NCBI nr
Match: XP_023515872.1 (fatty acid desaturase 4, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 643.3 bits (1658), Expect = 4.4e-181
Identity = 313/318 (98.43%), Postives = 315/318 (99.06%), Query Frame = 0


Query: 1   MSILVQNKFLLSSKTHVSLWSPAIQRKFVCCIANTTVNVAAATTAAAKPKHGDGQLVIER 60
           MSILVQNKFLLSSKTHVSLWSPAI RKFVCCIANTTVNVAAATTAAAKPKHGDGQLVIER
Sbjct: 1   MSILVQNKFLLSSKTHVSLWSPAIPRKFVCCIANTTVNVAAATTAAAKPKHGDGQLVIER 60

Query: 61  EPLSPTTPVLPNSSTYYSVLNDPSLQSTWSHRVWVTSGCTIVLISLAKSIAGAASTHTWL 120
           EPLSPTTPVLPNSSTYYSVLNDPSLQSTWSHRVWVTSGCTIVLISLAKSIAGAAS+HTWL
Sbjct: 61  EPLSPTTPVLPNSSTYYSVLNDPSLQSTWSHRVWVTSGCTIVLISLAKSIAGAASSHTWL 120

Query: 121 EPALAALVGYILADLGSGVYHWGIDNYGDASTPIFGTQIEAFQGHHKRPWTITKRQFANN 180
           EPALAALVGYILADLGSGVYHWGIDNYGDASTPIFGTQIEAFQGHHKRPWTITKRQFANN
Sbjct: 121 EPALAALVGYILADLGSGVYHWGIDNYGDASTPIFGTQIEAFQGHHKRPWTITKRQFANN 180

Query: 181 LYALARAVTFTVLPITLAFNDPILHGFVAVCSGCIMFSQQFHAWAHDKKSQLPPLVVAMQ 240
           LYALARAVTFTVLPITLA NDPILHG VAVCSGCIMFSQQFHAWAHDKKSQLPPLVVAMQ
Sbjct: 181 LYALARAVTFTVLPITLASNDPILHGLVAVCSGCIMFSQQFHAWAHDKKSQLPPLVVAMQ 240

Query: 241 DAGLLVSRLQHSAHHRPPYNNNYCIVSGIWNKLLDETRVFEALEMILFFKLGVRPRSWTE 300
           DAGLLVSRLQHSAHHRPPYNNNYCIVSGIWNKLLDET+VFEALEMILFFKLGVRPRSWTE
Sbjct: 241 DAGLLVSRLQHSAHHRPPYNNNYCIVSGIWNKLLDETKVFEALEMILFFKLGVRPRSWTE 300

Query: 301 PHSEWTEETEIIEQTTAY 319
           PHSEWTEETEIIEQTTAY
Sbjct: 301 PHSEWTEETEIIEQTTAY 318

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BLAST of Carg00063 vs. NCBI nr
Match: XP_004152938.1 (PREDICTED: fatty acid desaturase 4, chloroplastic [Cucumis sativus] >KGN56137.1 hypothetical protein Csa_3G077710 [Cucumis sativus])

HSP 1 Score: 538.1 bits (1385), Expect = 2.0e-149
Identity = 261/318 (82.08%), Postives = 281/318 (88.36%), Query Frame = 0


Query: 1   MSILVQNKFLLSSKTHVSLWSPAIQRKFVCCIANTTVNVAAATTAAAKPKHGDGQLVIER 60
           MSIL QNKFLLSS++HV+  S  I R+ V CIANTTVN       A  PKH DGQLVIER
Sbjct: 1   MSILAQNKFLLSSRSHVNPCSTPIPRRVVYCIANTTVN-----GVATSPKHADGQLVIER 60

Query: 61  EPLSPTTPVLPNSSTYYSVLNDPSLQSTWSHRVWVTSGCTIVLISLAKSIAGAASTHTWL 120
           E +SPT     NSSTYYSVLNDPSL+STWSHR WV  GCT VLISLAKSI GAAS+H WL
Sbjct: 61  EVISPTPLTFVNSSTYYSVLNDPSLRSTWSHRAWVAGGCTTVLISLAKSIVGAASSHIWL 120

Query: 121 EPALAALVGYILADLGSGVYHWGIDNYGDASTPIFGTQIEAFQGHHKRPWTITKRQFANN 180
           EPALAALVGYILADLGSGVYHWGIDNYGDASTPIFGTQIEAFQGHHK PWTITKRQFANN
Sbjct: 121 EPALAALVGYILADLGSGVYHWGIDNYGDASTPIFGTQIEAFQGHHKWPWTITKRQFANN 180

Query: 181 LYALARAVTFTVLPITLAFNDPILHGFVAVCSGCIMFSQQFHAWAHDKKSQLPPLVVAMQ 240
           LYALARAVTF VLP++LA +DPILHGFV +CSGCIMFSQQFHAWAH KKS+LPPLVVAMQ
Sbjct: 181 LYALARAVTFAVLPVSLAIDDPILHGFVGMCSGCIMFSQQFHAWAHSKKSELPPLVVAMQ 240

Query: 241 DAGLLVSRLQHSAHHRPPYNNNYCIVSGIWNKLLDETRVFEALEMILFFKLGVRPRSWTE 300
           +AGLLVSR QHS HHRPPYNNNYCIVSGIWNKLLDET++FEALEMIL+FKLG+RPRSWTE
Sbjct: 241 NAGLLVSRTQHSTHHRPPYNNNYCIVSGIWNKLLDETKLFEALEMILYFKLGLRPRSWTE 300

Query: 301 PHSEWTEETEIIEQTTAY 319
           P+SEWTEETEI+EQTTA+
Sbjct: 301 PNSEWTEETEILEQTTAH 313

[Close]

BLAST of Carg00063 vs. NCBI nr
Match: XP_022150986.1 (fatty acid desaturase 4, chloroplastic [Momordica charantia])

HSP 1 Score: 535.4 bits (1378), Expect = 1.3e-148
Identity = 263/317 (82.97%), Postives = 281/317 (88.64%), Query Frame = 0


Query: 1   MSILVQNKFLLSSKTHVSLWSPAIQRKFVCCIANTTVNVAAATTAAAKPKHGDGQLVIER 60
           MSIL QNKFLLSS+T V+  SP I RK V C+AN TV+VAAA     KPKH DGQLVI+R
Sbjct: 1   MSILAQNKFLLSSRTRVNPLSPPIPRKIVYCVAN-TVDVAAAGATTTKPKHADGQLVIKR 60

Query: 61  EPLSPTTPVLPNSSTYYSVLNDPSLQSTWSHRVWVTSGCTIVLISLAKSIAGAASTHTWL 120
           E +SP    L  +STY+ VLNDPSL+STW HR WV SGCT VLISLAKSI GAAS+H WL
Sbjct: 61  EFVSPPL-TLGKASTYHYVLNDPSLRSTWGHRAWVASGCTTVLISLAKSIVGAASSHIWL 120

Query: 121 EPALAALVGYILADLGSGVYHWGIDNYGDASTPIFGTQIEAFQGHHKRPWTITKRQFANN 180
           EP LAALVGYILADLGSGVYHWGIDNYGDASTPIFGTQIEAFQGHHK PWTITKRQFANN
Sbjct: 121 EPTLAALVGYILADLGSGVYHWGIDNYGDASTPIFGTQIEAFQGHHKWPWTITKRQFANN 180

Query: 181 LYALARAVTFTVLPITLAFNDPILHGFVAVCSGCIMFSQQFHAWAHDKKSQLPPLVVAMQ 240
           LYALARAVTF VLPI LAF DPILHGFV+VCSGCIMFSQQFHAWAHDKKSQLPPLVVAMQ
Sbjct: 181 LYALARAVTFVVLPINLAFGDPILHGFVSVCSGCIMFSQQFHAWAHDKKSQLPPLVVAMQ 240

Query: 241 DAGLLVSRLQHSAHHRPPYNNNYCIVSGIWNKLLDETRVFEALEMILFFKLGVRPRSWTE 300
           DAGLLVSR+QHSAHHRPPYNNNYCIVSGIWN+LLDET+VFEA EMILFFKLGVRPRSW+E
Sbjct: 241 DAGLLVSRMQHSAHHRPPYNNNYCIVSGIWNQLLDETKVFEAFEMILFFKLGVRPRSWSE 300

Query: 301 PHSEWTEETEIIEQTTA 318
           P++EWTEETE +EQTTA
Sbjct: 301 PNTEWTEETETVEQTTA 315

[Close]

BLAST of Carg00063 vs. TAIR10
Match: AT4G27030.1 (fatty acid desaturase A)

HSP 1 Score: 365.2 bits (936), Expect = 4.2e-101
Identity = 162/223 (72.65%), Postives = 190/223 (85.20%), Query Frame = 0


Query: 89  WSHRVWVTSGCTIVLISLAKSIAGAASTHTWLEPALAALVGYILADLGSGVYHWGIDNYG 148
           W+HR+WV +GCT + +SLAKS+ G   +H  LEPALA   GYILADLGSGVYHW IDNYG
Sbjct: 96  WTHRLWVAAGCTTLFVSLAKSVIGGFDSHLCLEPALAGYAGYILADLGSGVYHWAIDNYG 155

Query: 149 DASTPIFGTQIEAFQGHHKRPWTITKRQFANNLYALARAVTFTVLPITLAFNDPILHGFV 208
           D STP+ GTQIEAFQGHHK PWTIT+RQFANNL+ALA+ +TFTVLP+ LAFNDP+ HGFV
Sbjct: 156 DESTPVVGTQIEAFQGHHKWPWTITRRQFANNLHALAQVITFTVLPLDLAFNDPVFHGFV 215

Query: 209 AVCSGCIMFSQQFHAWAHDKKSQLPPLVVAMQDAGLLVSRLQHSAHHRPPYNNNYCIVSG 268
              + CI+FSQQFHAWAH  KS+LPPLVVA+QD GLLVSR QH+ HHR PYNNNYCIVSG
Sbjct: 216 CTFAFCILFSQQFHAWAHGTKSKLPPLVVALQDMGLLVSRRQHAEHHRAPYNNNYCIVSG 275

Query: 269 IWNKLLDETRVFEALEMILFFKLGVRPRSWTEPHSEWTEETEI 312
            WN +LDE++VFEALEM+ +F+LGVRPRSW+EP+S+W EETEI
Sbjct: 276 AWNNVLDESKVFEALEMVFYFQLGVRPRSWSEPNSDWIEETEI 318

[Close]

BLAST of Carg00063 vs. TAIR10
Match: AT1G62190.1 (Kua-ubiquitin conjugating enzyme hybrid localisation domain)

HSP 1 Score: 353.2 bits (905), Expect = 1.7e-97
Identity = 165/276 (59.78%), Postives = 202/276 (73.19%), Query Frame = 0


Query: 35  TTVNVAAATTAAAKPKHGDGQLVIEREPLSPTTPVLPNSSTYYSVLNDPSLQSTWSHRVW 94
           T V V  + T    P+     LV+E+  ++P  P+  N        NDP+LQSTW+HR+W
Sbjct: 24  TRVRVTCSVT-TTNPQLNHENLVVEKRLVNP--PLSKN--------NDPTLQSTWTHRLW 83

Query: 95  VTSGCTIVLISLAKSIAGAASTHTWLEPALAALVGYILADLGSGVYHWGIDNYGDASTPI 154
           V +G T +  S AKSI G   +H WL+PALA   GY+ ADLGSGVYHW IDNYG ASTPI
Sbjct: 84  VAAGSTTIFASFAKSIIGGFGSHLWLQPALACYAGYVFADLGSGVYHWAIDNYGGASTPI 143

Query: 155 FGTQIEAFQGHHKRPWTITKRQFANNLYALARAVTFTVLPITLAFNDPILHGFVAVCSGC 214
            G Q+EA QGHHK PWTITKRQFANN Y +ARA+TF VLP+ LA N+P+ H FV+  + C
Sbjct: 144 VGAQLEASQGHHKYPWTITKRQFANNSYTIARAITFIVLPLNLAINNPLFHSFVSTFAFC 203

Query: 215 IMFSQQFHAWAHDKKSQLPPLVVAMQDAGLLVSRLQHSAHHRPPYNNNYCIVSGIWNKLL 274
           I+ SQQFHAWAH  KS+LPPLV+A+QD GLLVSR  H  HH+ PYN+NYC+VSG WNK+L
Sbjct: 204 ILLSQQFHAWAHGTKSKLPPLVMALQDMGLLVSRKDHPGHHQAPYNSNYCVVSGAWNKVL 263

Query: 275 DETRVFEALEMILFFKLGVRPRSWTEPHSEWTEETE 311
           DE+ +F+ALEM LFF+ GVRP SW EP+S+WTEETE
Sbjct: 264 DESNLFKALEMALFFQFGVRPNSWNEPNSDWTEETE 288

[Close]

BLAST of Carg00063 vs. TAIR10
Match: AT2G22890.1 (Kua-ubiquitin conjugating enzyme hybrid localisation domain)

HSP 1 Score: 341.3 bits (874), Expect = 6.5e-94
Identity = 155/262 (59.16%), Postives = 198/262 (75.57%), Query Frame = 0


Query: 43  TTAAAKPKHGDGQLVIEREPLSPTTPVLPNSSTYYSVLNDPSLQSTWSHRVWVTSGCTIV 102
           +T  ++P H + +LV+E+  ++P             + NDP+LQSTW+HR+WV +GCT V
Sbjct: 31  STTNSQPNH-EMKLVVEQRLVNP------------PLSNDPTLQSTWTHRLWVAAGCTTV 90

Query: 103 LISLAKSIAGAASTHTWLEPALAALVGYILADLGSGVYHWGIDNYGDASTPIFGTQIEAF 162
            +S +KSI GA  +H WLEP+LA   GYILADLGSGVYHW  DNYGD STP+ G  IE  
Sbjct: 91  FVSFSKSIIGAFGSHLWLEPSLAGFAGYILADLGSGVYHWATDNYGDESTPLVGIHIEDS 150

Query: 163 QGHHKRPWTITKRQFANNLYALARAVTFTVLPITLAFNDPILHGFVAVCSGCIMFSQQFH 222
           Q HHK PWTITKRQFANNL+ +AR  T  VLP+ LAF+D ++HGFV++ + C++F Q FH
Sbjct: 151 QDHHKCPWTITKRQFANNLHFMARGTTLIVLPLDLAFDDHVVHGFVSMFAFCVLFCQLFH 210

Query: 223 AWAHDKKSQLPPLVVAMQDAGLLVSRLQHSAHHRPPYNNNYCIVSGIWNKLLDETRVFEA 282
           AWAH  KS+LPPLVV +QD GLLVSR+ H  HHR PYNNNYC+VSG+WNK+LDE+ VF+A
Sbjct: 211 AWAHGTKSKLPPLVVGLQDIGLLVSRIHHMNHHRAPYNNNYCVVSGVWNKVLDESNVFKA 270

Query: 283 LEMILFFKLGVRPRSWTEPHSE 305
           +EM+L+ +LGVRPRSWTEP+ E
Sbjct: 271 MEMVLYIQLGVRPRSWTEPNYE 279

[Close]

BLAST of Carg00063 vs. Swiss-Prot
Match: sp|Q9SZ42|FAD4_ARATH (Fatty acid desaturase 4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=FAD4 PE=1 SV=1)

HSP 1 Score: 365.2 bits (936), Expect = 7.6e-100
Identity = 162/223 (72.65%), Postives = 190/223 (85.20%), Query Frame = 0


Query: 89  WSHRVWVTSGCTIVLISLAKSIAGAASTHTWLEPALAALVGYILADLGSGVYHWGIDNYG 148
           W+HR+WV +GCT + +SLAKS+ G   +H  LEPALA   GYILADLGSGVYHW IDNYG
Sbjct: 96  WTHRLWVAAGCTTLFVSLAKSVIGGFDSHLCLEPALAGYAGYILADLGSGVYHWAIDNYG 155

Query: 149 DASTPIFGTQIEAFQGHHKRPWTITKRQFANNLYALARAVTFTVLPITLAFNDPILHGFV 208
           D STP+ GTQIEAFQGHHK PWTIT+RQFANNL+ALA+ +TFTVLP+ LAFNDP+ HGFV
Sbjct: 156 DESTPVVGTQIEAFQGHHKWPWTITRRQFANNLHALAQVITFTVLPLDLAFNDPVFHGFV 215

Query: 209 AVCSGCIMFSQQFHAWAHDKKSQLPPLVVAMQDAGLLVSRLQHSAHHRPPYNNNYCIVSG 268
              + CI+FSQQFHAWAH  KS+LPPLVVA+QD GLLVSR QH+ HHR PYNNNYCIVSG
Sbjct: 216 CTFAFCILFSQQFHAWAHGTKSKLPPLVVALQDMGLLVSRRQHAEHHRAPYNNNYCIVSG 275

Query: 269 IWNKLLDETRVFEALEMILFFKLGVRPRSWTEPHSEWTEETEI 312
            WN +LDE++VFEALEM+ +F+LGVRPRSW+EP+S+W EETEI
Sbjct: 276 AWNNVLDESKVFEALEMVFYFQLGVRPRSWSEPNSDWIEETEI 318

[Close]

BLAST of Carg00063 vs. Swiss-Prot
Match: sp|O04584|FD4L1_ARATH (Fatty acid desaturase 4-like 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=FAD4L1 PE=3 SV=1)

HSP 1 Score: 353.2 bits (905), Expect = 3.0e-96
Identity = 165/276 (59.78%), Postives = 202/276 (73.19%), Query Frame = 0


Query: 35  TTVNVAAATTAAAKPKHGDGQLVIEREPLSPTTPVLPNSSTYYSVLNDPSLQSTWSHRVW 94
           T V V  + T    P+     LV+E+  ++P  P+  N        NDP+LQSTW+HR+W
Sbjct: 24  TRVRVTCSVT-TTNPQLNHENLVVEKRLVNP--PLSKN--------NDPTLQSTWTHRLW 83

Query: 95  VTSGCTIVLISLAKSIAGAASTHTWLEPALAALVGYILADLGSGVYHWGIDNYGDASTPI 154
           V +G T +  S AKSI G   +H WL+PALA   GY+ ADLGSGVYHW IDNYG ASTPI
Sbjct: 84  VAAGSTTIFASFAKSIIGGFGSHLWLQPALACYAGYVFADLGSGVYHWAIDNYGGASTPI 143

Query: 155 FGTQIEAFQGHHKRPWTITKRQFANNLYALARAVTFTVLPITLAFNDPILHGFVAVCSGC 214
            G Q+EA QGHHK PWTITKRQFANN Y +ARA+TF VLP+ LA N+P+ H FV+  + C
Sbjct: 144 VGAQLEASQGHHKYPWTITKRQFANNSYTIARAITFIVLPLNLAINNPLFHSFVSTFAFC 203

Query: 215 IMFSQQFHAWAHDKKSQLPPLVVAMQDAGLLVSRLQHSAHHRPPYNNNYCIVSGIWNKLL 274
           I+ SQQFHAWAH  KS+LPPLV+A+QD GLLVSR  H  HH+ PYN+NYC+VSG WNK+L
Sbjct: 204 ILLSQQFHAWAHGTKSKLPPLVMALQDMGLLVSRKDHPGHHQAPYNSNYCVVSGAWNKVL 263

Query: 275 DETRVFEALEMILFFKLGVRPRSWTEPHSEWTEETE 311
           DE+ +F+ALEM LFF+ GVRP SW EP+S+WTEETE
Sbjct: 264 DESNLFKALEMALFFQFGVRPNSWNEPNSDWTEETE 288

[Close]

BLAST of Carg00063 vs. Swiss-Prot
Match: sp|O81006|FD4L2_ARATH (Fatty acid desaturase 4-like 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=FAD4L2 PE=2 SV=1)

HSP 1 Score: 341.3 bits (874), Expect = 1.2e-92
Identity = 155/262 (59.16%), Postives = 198/262 (75.57%), Query Frame = 0


Query: 43  TTAAAKPKHGDGQLVIEREPLSPTTPVLPNSSTYYSVLNDPSLQSTWSHRVWVTSGCTIV 102
           +T  ++P H + +LV+E+  ++P             + NDP+LQSTW+HR+WV +GCT V
Sbjct: 31  STTNSQPNH-EMKLVVEQRLVNP------------PLSNDPTLQSTWTHRLWVAAGCTTV 90

Query: 103 LISLAKSIAGAASTHTWLEPALAALVGYILADLGSGVYHWGIDNYGDASTPIFGTQIEAF 162
            +S +KSI GA  +H WLEP+LA   GYILADLGSGVYHW  DNYGD STP+ G  IE  
Sbjct: 91  FVSFSKSIIGAFGSHLWLEPSLAGFAGYILADLGSGVYHWATDNYGDESTPLVGIHIEDS 150

Query: 163 QGHHKRPWTITKRQFANNLYALARAVTFTVLPITLAFNDPILHGFVAVCSGCIMFSQQFH 222
           Q HHK PWTITKRQFANNL+ +AR  T  VLP+ LAF+D ++HGFV++ + C++F Q FH
Sbjct: 151 QDHHKCPWTITKRQFANNLHFMARGTTLIVLPLDLAFDDHVVHGFVSMFAFCVLFCQLFH 210

Query: 223 AWAHDKKSQLPPLVVAMQDAGLLVSRLQHSAHHRPPYNNNYCIVSGIWNKLLDETRVFEA 282
           AWAH  KS+LPPLVV +QD GLLVSR+ H  HHR PYNNNYC+VSG+WNK+LDE+ VF+A
Sbjct: 211 AWAHGTKSKLPPLVVGLQDIGLLVSRIHHMNHHRAPYNNNYCVVSGVWNKVLDESNVFKA 270

Query: 283 LEMILFFKLGVRPRSWTEPHSE 305
           +EM+L+ +LGVRPRSWTEP+ E
Sbjct: 271 MEMVLYIQLGVRPRSWTEPNYE 279

[Close]

BLAST of Carg00063 vs. Swiss-Prot
Match: sp|Q5UR78|YL630_MIMIV (Uncharacterized protein L630 OS=Acanthamoeba polyphaga mimivirus OX=212035 GN=MIMI_L630 PE=4 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 3.2e-13
Identity = 49/181 (27.07%), Postives = 82/181 (45.30%), Query Frame = 0


Query: 118 TWLEPALAALVGYILADLGSGVYHWGIDNYGDASTPIFG-TQIEAFQGHHKRPWTITKRQ 177
           T ++  +  ++GY+L+D   G+YHW  D Y    TPI G T I   + HH RP  + +  
Sbjct: 4   TIIDKFIQIVLGYLLSDFIMGIYHWIKDTYFSPFTPIIGKTFIWGSRLHHVRPRYVLEFT 63

Query: 178 FANNLYALARAVTFTVLPITLAFNDPILHGFVAVCSGCIMFSQQFHAWAHDKKSQLPPLV 237
             + +   A+     + P+   F    L  F+      I  +   H + H+   + P   
Sbjct: 64  DKDLIIDSAKWTLSWIGPLFFWFG---LTPFLVTMFIMISLNDVIHKYTHEIDHERPMWA 123

Query: 238 VAMQDAGLLVSRLQHSAHHRPPYNNNYCIVSGIWNKLLDETRVFEALEMILFFKLGVRPR 297
             +Q  G   S  +H  HH  P+  NYC V+   N  L++  ++  LE  + +  GV+PR
Sbjct: 124 TILQRIGFFQSHDEHHLHHIAPHEINYCPVTPYVNIWLEKINLWRKLESFVEYLTGVKPR 181

[Close]

BLAST of Carg00063 vs. TrEMBL
Match: tr|A0A0A0L6B9|A0A0A0L6B9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G077710 PE=4 SV=1)

HSP 1 Score: 538.1 bits (1385), Expect = 1.3e-149
Identity = 261/318 (82.08%), Postives = 281/318 (88.36%), Query Frame = 0


Query: 1   MSILVQNKFLLSSKTHVSLWSPAIQRKFVCCIANTTVNVAAATTAAAKPKHGDGQLVIER 60
           MSIL QNKFLLSS++HV+  S  I R+ V CIANTTVN       A  PKH DGQLVIER
Sbjct: 1   MSILAQNKFLLSSRSHVNPCSTPIPRRVVYCIANTTVN-----GVATSPKHADGQLVIER 60

Query: 61  EPLSPTTPVLPNSSTYYSVLNDPSLQSTWSHRVWVTSGCTIVLISLAKSIAGAASTHTWL 120
           E +SPT     NSSTYYSVLNDPSL+STWSHR WV  GCT VLISLAKSI GAAS+H WL
Sbjct: 61  EVISPTPLTFVNSSTYYSVLNDPSLRSTWSHRAWVAGGCTTVLISLAKSIVGAASSHIWL 120

Query: 121 EPALAALVGYILADLGSGVYHWGIDNYGDASTPIFGTQIEAFQGHHKRPWTITKRQFANN 180
           EPALAALVGYILADLGSGVYHWGIDNYGDASTPIFGTQIEAFQGHHK PWTITKRQFANN
Sbjct: 121 EPALAALVGYILADLGSGVYHWGIDNYGDASTPIFGTQIEAFQGHHKWPWTITKRQFANN 180

Query: 181 LYALARAVTFTVLPITLAFNDPILHGFVAVCSGCIMFSQQFHAWAHDKKSQLPPLVVAMQ 240
           LYALARAVTF VLP++LA +DPILHGFV +CSGCIMFSQQFHAWAH KKS+LPPLVVAMQ
Sbjct: 181 LYALARAVTFAVLPVSLAIDDPILHGFVGMCSGCIMFSQQFHAWAHSKKSELPPLVVAMQ 240

Query: 241 DAGLLVSRLQHSAHHRPPYNNNYCIVSGIWNKLLDETRVFEALEMILFFKLGVRPRSWTE 300
           +AGLLVSR QHS HHRPPYNNNYCIVSGIWNKLLDET++FEALEMIL+FKLG+RPRSWTE
Sbjct: 241 NAGLLVSRTQHSTHHRPPYNNNYCIVSGIWNKLLDETKLFEALEMILYFKLGLRPRSWTE 300

Query: 301 PHSEWTEETEIIEQTTAY 319
           P+SEWTEETEI+EQTTA+
Sbjct: 301 PNSEWTEETEILEQTTAH 313

[Close]

BLAST of Carg00063 vs. TrEMBL
Match: tr|A0A1S3CJN9|A0A1S3CJN9_CUCME (fatty acid desaturase 4, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103501595 PE=4 SV=1)

HSP 1 Score: 526.9 bits (1356), Expect = 3.1e-146
Identity = 255/318 (80.19%), Postives = 279/318 (87.74%), Query Frame = 0


Query: 1   MSILVQNKFLLSSKTHVSLWSPAIQRKFVCCIANTTVNVAAATTAAAKPKHGDGQLVIER 60
           MSIL QNKFLLSS++HV+  S    R+ V CIANTTVN    ++     KHGDGQLVIER
Sbjct: 1   MSILAQNKFLLSSRSHVNPCSTPTPRRVVYCIANTTVNGVGTSS-----KHGDGQLVIER 60

Query: 61  EPLSPTTPVLPNSSTYYSVLNDPSLQSTWSHRVWVTSGCTIVLISLAKSIAGAASTHTWL 120
           E +SP+     NSSTYYSVLNDPSL+STWSHR WV  GCT VLISLAKSI GAAS+  WL
Sbjct: 61  EVISPSPLTSVNSSTYYSVLNDPSLRSTWSHRAWVAGGCTTVLISLAKSIVGAASSRIWL 120

Query: 121 EPALAALVGYILADLGSGVYHWGIDNYGDASTPIFGTQIEAFQGHHKRPWTITKRQFANN 180
           EPALAALVGYILADLGSG+YHWGIDNYG ASTPIFGTQIEAFQGHHK PWTITKRQFANN
Sbjct: 121 EPALAALVGYILADLGSGIYHWGIDNYGGASTPIFGTQIEAFQGHHKWPWTITKRQFANN 180

Query: 181 LYALARAVTFTVLPITLAFNDPILHGFVAVCSGCIMFSQQFHAWAHDKKSQLPPLVVAMQ 240
           LYALARAVTF VLP++LAF+DP LHGFV VCSGCIMFSQQFHAWAH KKS++PPLVVAMQ
Sbjct: 181 LYALARAVTFAVLPVSLAFDDPTLHGFVGVCSGCIMFSQQFHAWAHGKKSEIPPLVVAMQ 240

Query: 241 DAGLLVSRLQHSAHHRPPYNNNYCIVSGIWNKLLDETRVFEALEMILFFKLGVRPRSWTE 300
           DAGLLVSR QH+ HHRPPYNNNYCIVSGIWN+LLDET+VFEALEMIL+FKLG+RPRSWTE
Sbjct: 241 DAGLLVSRTQHATHHRPPYNNNYCIVSGIWNQLLDETKVFEALEMILYFKLGLRPRSWTE 300

Query: 301 PHSEWTEETEIIEQTTAY 319
           P+SEWTEETEI+EQTTA+
Sbjct: 301 PNSEWTEETEILEQTTAH 313

[Close]

BLAST of Carg00063 vs. TrEMBL
Match: tr|W9QQD6|W9QQD6_9ROSA (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_017818 PE=4 SV=1)

HSP 1 Score: 445.3 bits (1144), Expect = 1.2e-121
Identity = 223/316 (70.57%), Postives = 250/316 (79.11%), Query Frame = 0


Query: 1   MSILVQNKFLLSSKTHVSLWSPAIQRKFVCCIANTTVNVAAATTAAAKPKHGDGQLVIER 60
           MSIL QNK  L S+ H          K+     +T V+ +A TT   KPK    +LV+E 
Sbjct: 1   MSILAQNKLPLGSQRHF--------HKYHVPSIHTRVHCSATTT--TKPKTEPNRLVVEP 60

Query: 61  EPLSPTTPVLPNSSTYYSVLNDPSLQSTWSHRVWVTSGCTIVLISLAKSIAGAASTHTWL 120
           + + PT  +  NS+    VLNDPSL STWSHR WV SGCT VLISLAKS+AGAA++H WL
Sbjct: 61  QVVLPTPSLSTNSAR--PVLNDPSLLSTWSHRAWVASGCTTVLISLAKSLAGAANSHIWL 120

Query: 121 EPALAALVGYILADLGSGVYHWGIDNYGDASTPIFGTQIEAFQGHHKRPWTITKRQFANN 180
           EP LA LVGYILADLGSGVYHWGIDNYGDASTP FGTQIEAFQGHHK PWTIT+RQFANN
Sbjct: 121 EPVLAGLVGYILADLGSGVYHWGIDNYGDASTPSFGTQIEAFQGHHKWPWTITRRQFANN 180

Query: 181 LYALARAVTFTVLPITLAFNDPILHGFVAVCSGCIMFSQQFHAWAHDKKSQLPPLVVAMQ 240
           L+ALARAVTFTVLPI L  NDPI+HGFVAVCSGCIMFSQQFHAWAH  KS+LPPLVVA+Q
Sbjct: 181 LHALARAVTFTVLPIDLLCNDPIIHGFVAVCSGCIMFSQQFHAWAHGTKSRLPPLVVALQ 240

Query: 241 DAGLLVSRLQHSAHHRPPYNNNYCIVSGIWNKLLDETRVFEALEMILFFKLGVRPRSWTE 300
           D  +LVSR QH+AHHRPPYNNNYCIVSG+WN+ LD+  VFEALEMILFFKLGVRPRSW+E
Sbjct: 241 DLSILVSRSQHAAHHRPPYNNNYCIVSGVWNEFLDKQMVFEALEMILFFKLGVRPRSWSE 300

Query: 301 PHSEWTEETEIIEQTT 317
           P+S+WTEE E   Q T
Sbjct: 301 PNSDWTEEAETPSQLT 304

[Close]

BLAST of Carg00063 vs. TrEMBL
Match: tr|A0A2I4DVV2|A0A2I4DVV2_9ROSI (fatty acid desaturase 4, chloroplastic OS=Juglans regia OX=51240 GN=LOC108983937 PE=4 SV=1)

HSP 1 Score: 441.4 bits (1134), Expect = 1.7e-120
Identity = 220/319 (68.97%), Postives = 247/319 (77.43%), Query Frame = 0


Query: 1   MSILVQNKFLLSSKTHVSLWSPAIQRKFVCCIANTTVNVAAATTAAAKPKHGDGQLVIE- 60
           MSIL Q+K+ LS + HV        R  VCC+        AATT  AKP+    QLV+E 
Sbjct: 1   MSILAQHKYPLSFRHHVYRCHRPFNRTRVCCL--------AATTTTAKPRRNSDQLVMEP 60

Query: 61  REPLSPTTPVLPNSSTYYSVLNDPSLQSTWSHRVWVTSGCTIVLISLAKSIAGAASTHTW 120
           R   SP +   PN      VL+DP+L+STWSHR WV SGCT VLISLAK+  GAA +H W
Sbjct: 61  RLDPSPASVTDPNR----PVLHDPTLKSTWSHRAWVASGCTTVLISLAKAATGAAESHLW 120

Query: 121 LEPALAALVGYILADLGSGVYHWGIDNYGDASTPIFGTQIEAFQGHHKRPWTITKRQFAN 180
           LEP LA  VGYILADLGSGVYHWGIDNYG ASTP FG QIEAFQGHHK PWTIT+RQFAN
Sbjct: 121 LEPILAGWVGYILADLGSGVYHWGIDNYGGASTPFFGAQIEAFQGHHKWPWTITRRQFAN 180

Query: 181 NLYALARAVTFTVLPITLAFNDPILHGFVAVCSGCIMFSQQFHAWAHDKKSQLPPLVVAM 240
           NL+ALARAVTFTVLP+ LAFNDP+ HGFV VCSGCIMFSQQFHAWAH  KS+LPPLVVA+
Sbjct: 181 NLHALARAVTFTVLPLDLAFNDPVFHGFVWVCSGCIMFSQQFHAWAHTTKSKLPPLVVAL 240

Query: 241 QDAGLLVSRLQHSAHHRPPYNNNYCIVSGIWNKLLDETRVFEALEMILFFKLGVRPRSWT 300
           QDAGLLVSR QH+ HHRPPYNNNYCIVSG+WN+ LD  +VF ALEM+LFFKLGVRPRSW+
Sbjct: 241 QDAGLLVSRSQHADHHRPPYNNNYCIVSGVWNEFLDRQKVFGALEMMLFFKLGVRPRSWS 300

Query: 301 EPHSEWTEETEIIEQTTAY 319
           EP+SEWTEE EI  +  A+
Sbjct: 301 EPNSEWTEENEIPPKIKAH 307

[Close]

BLAST of Carg00063 vs. TrEMBL
Match: tr|A0A2P6QC56|A0A2P6QC56_ROSCH (Putative B domain of TMEM189, localization domain-containing protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr5g0039071 PE=4 SV=1)

HSP 1 Score: 431.8 bits (1109), Expect = 1.3e-117
Identity = 217/316 (68.67%), Postives = 244/316 (77.22%), Query Frame = 0


Query: 1   MSILVQNKFLLSSKTHVSLWSPAIQRKFVC--CIANTTVNVAAATTAAAKPKHGDGQLVI 60
           MSI  QNK L S K HV           +C   I  TTV+ + +TT  AKPK    +L+I
Sbjct: 1   MSIFTQNKLLPSPKHHVHT---------ICHSPILRTTVHCSVSTT--AKPKPVPEKLII 60

Query: 61  EREPLSPTTPVLPNSSTYYSVLNDPSLQSTWSHRVWVTSGCTIVLISLAKSIAGAASTHT 120
           E   L     + P+      +LNDPSL STWSHR WV SGCT VLISLAKS+AGAA +H 
Sbjct: 61  EPPRLQ---QLEPSPDNIRPMLNDPSLLSTWSHRAWVASGCTTVLISLAKSVAGAAHSHI 120

Query: 121 WLEPALAALVGYILADLGSGVYHWGIDNYGDASTPIFGTQIEAFQGHHKRPWTITKRQFA 180
           W EP LA LVGY+LADLGSGVYHWGIDNYG ASTPIFG QIEAFQGHHK PWTITKRQFA
Sbjct: 121 WAEPILAGLVGYVLADLGSGVYHWGIDNYGGASTPIFGAQIEAFQGHHKWPWTITKRQFA 180

Query: 181 NNLYALARAVTFTVLPITLAFNDPILHGFVAVCSGCIMFSQQFHAWAHDKKSQLPPLVVA 240
           NNL+ALAR +TFTVLP+ LAF+DPI HGFVAVCSGCIMFSQQFHAWAH  KS+LPPLV+A
Sbjct: 181 NNLHALARVITFTVLPLDLAFDDPIFHGFVAVCSGCIMFSQQFHAWAHGTKSRLPPLVLA 240

Query: 241 MQDAGLLVSRLQHSAHHRPPYNNNYCIVSGIWNKLLDETRVFEALEMILFFKLGVRPRSW 300
           +QD+GLL+SR QHSAHHR PYNNNYCIVSG+WN+ LD+ +VFEALEMILFFK G+RPRSW
Sbjct: 241 LQDSGLLISRSQHSAHHRQPYNNNYCIVSGVWNEFLDKQKVFEALEMILFFKQGLRPRSW 300

Query: 301 TEPHSEWTEETEIIEQ 315
           +EP SEW EE E I Q
Sbjct: 301 SEPCSEWIEEAETISQ 302

The following BLAST results are available for this feature:

BLAST of Carg00063 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022943161.1	1.2e-183	99.69	fatty acid desaturase 4, chloroplastic [Cucurbita moschata]	[more]
XP_022976256.1	8.9e-182	98.43	fatty acid desaturase 4, chloroplastic [Cucurbita maxima]	[more]
XP_023515872.1	4.4e-181	98.43	fatty acid desaturase 4, chloroplastic [Cucurbita pepo subsp. pepo]	[more]
XP_004152938.1	2.0e-149	82.08	PREDICTED: fatty acid desaturase 4, chloroplastic [Cucumis sativus] >KGN56137.1 ...	[more]
XP_022150986.1	1.3e-148	82.97	fatty acid desaturase 4, chloroplastic [Momordica charantia]	[more]

BLAST of Carg00063 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G27030.1	4.2e-101	72.65	fatty acid desaturase A	[more]
AT1G62190.1	1.7e-97	59.78	Kua-ubiquitin conjugating enzyme hybrid localisation domain	[more]
AT2G22890.1	6.5e-94	59.16	Kua-ubiquitin conjugating enzyme hybrid localisation domain	[more]

BLAST of Carg00063 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9SZ42\|FAD4_ARATH	7.6e-100	72.65	Fatty acid desaturase 4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=FAD4 P...	[more]
sp\|O04584\|FD4L1_ARATH	3.0e-96	59.78	Fatty acid desaturase 4-like 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN...	[more]
sp\|O81006\|FD4L2_ARATH	1.2e-92	59.16	Fatty acid desaturase 4-like 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN...	[more]
sp\|Q5UR78\|YL630_MIMIV	3.2e-13	27.07	Uncharacterized protein L630 OS=Acanthamoeba polyphaga mimivirus OX=212035 GN=MI...	[more]

BLAST of Carg00063 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0L6B9\|A0A0A0L6B9_CUCSA	1.3e-149	82.08	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G077710 PE=4 SV=1	[more]
tr\|A0A1S3CJN9\|A0A1S3CJN9_CUCME	3.1e-146	80.19	fatty acid desaturase 4, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103501595 P...	[more]
tr\|W9QQD6\|W9QQD6_9ROSA	1.2e-121	70.57	Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_017818 PE=4 SV=1	[more]
tr\|A0A2I4DVV2\|A0A2I4DVV2_9ROSI	1.7e-120	68.97	fatty acid desaturase 4, chloroplastic OS=Juglans regia OX=51240 GN=LOC108983937...	[more]
tr\|A0A2P6QC56\|A0A2P6QC56_ROSCH	1.3e-117	68.67	Putative B domain of TMEM189, localization domain-containing protein OS=Rosa chi...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR019547	TMEM189_B_dmain

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg00063-RA	Carg00063-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019547	B domain of TMEM189, localisation domain	PFAM	PF10520	TMEM189_B_dmain	coord: 130..298 e-value: 6.7E-64 score: 215.1
None	No IPR available	PANTHER	PTHR44910	FAMILY NOT NAMED	coord: 11..316

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg00063	Cla005301	Watermelon (97103) v1	carwmB0658
Carg00063	Csa3G077710	Cucumber (Chinese Long) v2	carcuB0682
Carg00063	MELO3C025390	Melon (DHL92) v3.5.1	carmeB0672
Carg00063	ClCG10G005490	Watermelon (Charleston Gray)	carwcgB0640
Carg00063	CSPI03G05210	Wild cucumber (PI 183967)	carcpiB0694
Carg00063	CmaCh04G009500	Cucurbita maxima (Rimu)	carcmaB0948
Carg00063	Lsi05G006070	Bottle gourd (USVL1VR-Ls)	carlsiB615
Carg00063	CsGy3G005290	Cucumber (Gy14) v2	carcgybB0659
Carg00063	MELO3C025390.2	Melon (DHL92) v3.6.1	carmedB0684
Carg00063	CsaV3_3G005230	Cucumber (Chinese Long) v3	carcucB0698
Carg00063	Cla97C10G189720	Watermelon (97103) v2	carwmbB0685
Carg00063	Bhi11G000492	Wax gourd	carwgoB0777

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg00063	Wax gourd	carwgoB0776
Carg00063	Silver-seed gourd	carcarB567
Carg00063	Cucumber (Gy14) v2	carcgybB0657
Carg00063	Cucumber (Gy14) v2	carcgybB0662
Carg00063	Cucumber (Gy14) v1	carcgyB0738
Carg00063	Cucumber (Gy14) v1	carcgyB0739
Carg00063	Cucurbita maxima (Rimu)	carcmaB0944
Carg00063	Cucurbita maxima (Rimu)	carcmaB0946
Carg00063	Cucurbita moschata (Rifu)	carcmoB0919
Carg00063	Cucurbita moschata (Rifu)	carcmoB0920
Carg00063	Cucurbita moschata (Rifu)	carcmoB0921
Carg00063	Cucurbita moschata (Rifu)	carcmoB0923
Carg00063	Cucurbita pepo (Zucchini)	carcpeB0933
Carg00063	Cucurbita pepo (Zucchini)	carcpeB0938
Carg00063	Wild cucumber (PI 183967)	carcpiB0696
Carg00063	Cucumber (Chinese Long) v2	carcuB0684
Carg00063	Cucumber (Chinese Long) v3	carcucB0696
Carg00063	Bottle gourd (USVL1VR-Ls)	carlsiB616
Carg00063	Melon (DHL92) v3.5.1	carmeB0670
Carg00063	Melon (DHL92) v3.5.1	carmeB0671
Carg00063	Melon (DHL92) v3.6.1	carmedB0682
Carg00063	Watermelon (Charleston Gray)	carwcgB0641
Carg00063	Watermelon (97103) v1	carwmB0659
Carg00063	Watermelon (97103) v2	carwmbB0686