CSPI07G21590 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI07G21590
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionUnknown protein
LocationChr7 : 18415115 .. 18415399 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTTTGTCTGGGAATATTGTTTGGCTGCAAAAGATCTCGCACCCCAACAGACTATCTCCTCTCAGCTTTACTCCTCATAGTCATTCTTTCCTCTCTTCGTCTCCTCTGCTACCTCGTTTCTCGCTTCTTGAAACGACGACACAACAACCAGCATCCCGATCCCACCTCCGAAGTTCAACCACAGACCGATGTTGCTCATCTTCAACAACCAACACCTATGCCAGACAACAAGGTTCTTACCCCTGCTGATGTTCTTCCTCTTGCTGCCTTCTCAAGAAAGTAA

mRNA sequence

ATGGTTTGTCTGGGAATATTGTTTGGCTGCAAAAGATCTCGCACCCCAACAGACTATCTCCTCTCAGCTTTACTCCTCATAGTCATTCTTTCCTCTCTTCGTCTCCTCTGCTACCTCGTTTCTCGCTTCTTGAAACGACGACACAACAACCAGCATCCCGATCCCACCTCCGAAGTTCAACCACAGACCGATGTTGCTCATCTTCAACAACCAACACCTATGCCAGACAACAAGGTTCTTACCCCTGCTGATGTTCTTCCTCTTGCTGCCTTCTCAAGAAAGTAA

Coding sequence (CDS)

ATGGTTTGTCTGGGAATATTGTTTGGCTGCAAAAGATCTCGCACCCCAACAGACTATCTCCTCTCAGCTTTACTCCTCATAGTCATTCTTTCCTCTCTTCGTCTCCTCTGCTACCTCGTTTCTCGCTTCTTGAAACGACGACACAACAACCAGCATCCCGATCCCACCTCCGAAGTTCAACCACAGACCGATGTTGCTCATCTTCAACAACCAACACCTATGCCAGACAACAAGGTTCTTACCCCTGCTGATGTTCTTCCTCTTGCTGCCTTCTCAAGAAAGTAA
Homology
[Close]
BLAST of CSPI07G21590 vs. TrEMBL
Match: A0A0A0KAI0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G447070 PE=4 SV=1)

HSP 1 Score: 183.3 bits (464), Expect = 1.3e-43
Identity = 93/94 (98.94%), Postives = 93/94 (98.94%), Query Frame = 1 

Query: 1  MVCLGILFGCKRSRTPTDYLLSALLLIVILSSLRLLCYLVSRFLKRRHNNQHPDPTSEVQ 60
          MVCLGILFGCKRSRTPTDYLLSALLLIVILSSLRLLCYLVSRFLKRR NNQHPDPTSEVQ
Sbjct: 1  MVCLGILFGCKRSRTPTDYLLSALLLIVILSSLRLLCYLVSRFLKRRRNNQHPDPTSEVQ 60

Query: 61 PQTDVAHLQQPTPMPDNKVLTPADVLPLAAFSRK 95
          PQTDVAHLQQPTPMPDNKVLTPADVLPLAAFSRK
Sbjct: 61 PQTDVAHLQQPTPMPDNKVLTPADVLPLAAFSRK 94

[Close]
BLAST of CSPI07G21590 vs. NCBI nr
Match: gi|700190159|gb|KGN45392.1| (hypothetical protein Csa_7G447070 [Cucumis sativus])

HSP 1 Score: 183.3 bits (464), Expect = 1.9e-43
Identity = 93/94 (98.94%), Postives = 93/94 (98.94%), Query Frame = 1 

Query: 1  MVCLGILFGCKRSRTPTDYLLSALLLIVILSSLRLLCYLVSRFLKRRHNNQHPDPTSEVQ 60
          MVCLGILFGCKRSRTPTDYLLSALLLIVILSSLRLLCYLVSRFLKRR NNQHPDPTSEVQ
Sbjct: 1  MVCLGILFGCKRSRTPTDYLLSALLLIVILSSLRLLCYLVSRFLKRRRNNQHPDPTSEVQ 60

Query: 61 PQTDVAHLQQPTPMPDNKVLTPADVLPLAAFSRK 95
          PQTDVAHLQQPTPMPDNKVLTPADVLPLAAFSRK
Sbjct: 61 PQTDVAHLQQPTPMPDNKVLTPADVLPLAAFSRK 94

The following BLAST results are available for this feature:
BLAST of CSPI07G21590 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CSPI07G21590 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KAI0_CUCSA1.3e-4398.94Uncharacterized protein OS=Cucumis sativus GN=Csa_7G447070 PE=4 SV=1[more]
BLAST of CSPI07G21590 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CSPI07G21590 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700190159|gb|KGN45392.1|1.9e-4398.94hypothetical protein Csa_7G447070 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI07G21590.1CSPI07G21590.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CSPI07G21590Csa7G447070Cucumber (Chinese Long) v2cpicuB354
CSPI07G21590Lsi02G028140Bottle gourd (USVL1VR-Ls)cpilsiB517
CSPI07G21590CsaV3_7G033490Cucumber (Chinese Long) v3cpicucB414
CSPI07G21590CmoCh17G007550Cucurbita moschata (Rifu)cmocpiB381
CSPI07G21590Cp4.1LG12g08300Cucurbita pepo (Zucchini)cpecpiB163
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CSPI07G21590Cucurbita maxima (Rimu)cmacpiB392
CSPI07G21590Cucurbita maxima (Rimu)cmacpiB501
CSPI07G21590Cucurbita maxima (Rimu)cmacpiB935
CSPI07G21590Cucurbita moschata (Rifu)cmocpiB074
CSPI07G21590Cucurbita moschata (Rifu)cmocpiB493
CSPI07G21590Cucurbita moschata (Rifu)cmocpiB914
CSPI07G21590Melon (DHL92) v3.5.1cpimeB525
CSPI07G21590Melon (DHL92) v3.5.1cpimeB560
CSPI07G21590Watermelon (Charleston Gray)cpiwcgB553
CSPI07G21590Watermelon (Charleston Gray)cpiwcgB590
CSPI07G21590Watermelon (Charleston Gray)cpiwcgB594
CSPI07G21590Watermelon (97103) v1cpiwmB585
CSPI07G21590Watermelon (97103) v1cpiwmB605
CSPI07G21590Watermelon (97103) v1cpiwmB632
CSPI07G21590Cucurbita pepo (Zucchini)cpecpiB346
CSPI07G21590Bottle gourd (USVL1VR-Ls)cpilsiB546
CSPI07G21590Melon (DHL92) v3.6.1cpimedB512
CSPI07G21590Melon (DHL92) v3.6.1cpimedB545
CSPI07G21590Cucumber (Gy14) v2cgybcpiB156
CSPI07G21590Cucumber (Gy14) v2cgybcpiB331
CSPI07G21590Silver-seed gourdcarcpiB0135
CSPI07G21590Silver-seed gourdcarcpiB0146
CSPI07G21590Silver-seed gourdcarcpiB0780
CSPI07G21590Silver-seed gourdcarcpiB1064
CSPI07G21590Cucumber (Chinese Long) v3cpicucB399
CSPI07G21590Watermelon (97103) v2cpiwmbB571
CSPI07G21590Watermelon (97103) v2cpiwmbB575
CSPI07G21590Watermelon (97103) v2cpiwmbB596
CSPI07G21590Wax gourdcpiwgoB670
CSPI07G21590Wax gourdcpiwgoB702
CSPI07G21590Wax gourdcpiwgoB724
CSPI07G21590Cucumber (Gy14) v1cgycpiB535