CSPI07G18350 (gene) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATATATTTTAAGGAAAAAAATCAGCAAAACTAAAAATATTCTTCAATTGCAATGTCTCTAAAATCGTCAAATACCAATAAATAGCAATTTTACACGAAAAGCCCTCCTTGGAGTGTGCTGCAGAACAACTACAACCTCATCATCGCCTAGATTCCTCTTCGTTTCTTCTTCATTAATGGCGTCCTTAACTACCTCCGGCCTCCTCAAAACCCCTCTTAAGAATTCCCAATCTCCTGCAAATTCTCTCCAATATCCACCTTTTGCTTATGGGCAACATCAACTGCCCGTTTCCCTCAAAAGGGCTTTTCCCGGACGAGCCATTAGAGCTTCACCTTCGAATTCGGGTCCATCCACGACCTCCTCACCAGGGCTGTACTCCGCTCAGAAATTTGAATTGACCATTGGAAACGTGGACTTGGTTCTTGAGGACGTAAGGCCTTATCTAATTGCAGATGGAGGAAATGTCGATGTTGTTTCTGTTGAAGATGGAGTAGTTTCCCTCAAACTCGTTGGTGGGTAGATTTCTTGTCTCGTTGAATTGAATGGGTTTGTTTTAATTTCCCTTGTTAATTTAATTTTTTGTGTTGAAATTTTTGTTACTTATAAATTGGTTGTTGTTGGGGTATGTTCTTTGGTGTTTCTATAGTTTAGCAAATTGTGTTGAATATCTTTTACACATTATGGTATTTAGTAGTATCTGCACTTTAGAGATTTGAGTCTAATTCATTTCTTTCATCGAAGCAATCCTGGGATCGTATGGTTTAGGACAAAGTTGATATCTTTGTGATTCTCGGTCTGAGTATGCCCCTTCAGCCCATCTCTTTTTACATAGCCAAATAGTTGGTGTATGCTTTCTCGACGCTGGCCCGATAGAAGTGATTCCTTTTTCTCAAAAAGAATGGTCTCTTTCTTAGCATTACTGTAACCCATTTGGTCTTAGTCGTCTTGTGTGGAAGGAGCGAGATGACAGAGATTTTGCTCTTCTCACCCCTGTCCGACCACCCGATTGGTGAAGACTCGGAACAAACCACCCCGCTTTGGGAGACAACGAAGACTTTACTCGATGTCTTGATCCATCCGTAGTCTGCTAATCTGATCCCAACGTCTTTAATTCTGACGAGCTTGTCTCGGAGAGATCTCTATCTTTTGTTTGTTACACAACACTGAAGGCTCCACTAGAAAAGGAAGGAAAAAGGAAAATACCTCCAATGAGAAATCTCAAGATCAAGATTAGTAGTGCTGCAGTTCTATTTACAATCTTAAACTTTCCTAACTACAATCTTCCTCCATTAGCACTGAATCTATTGGAAATTTTGAACAGTTTAGACTTGGGCAGATGGATATGATTTTCCTTTCCTTATATGAGGGTCTTTCCAATGAAAAGGATTTACCAGAGAATAGATGATTTGATATCTATCTTTAAAGAAAACCACGAAAAGGATCCTTAATTTCACTTGTTTGTGAACACTTTTAACCAATCTTGTGGGAGATTTGGTATATATCTAACAGGAATGTTTCTCAGGACATGGGTGGGGTTCTCATGACATTTGAAGGGACTGCAGACTGATGTGGCCTTTCGGTTTCTTTCCTGCATATACTAGTTGGAGTACATTTGTTTTGTTGTCTTGGTCTAGGTAAGTTTTGGACAGCACCATCATCTTGTACATGTTACTGGTGTGTTTTATCTGTTTCTTATCAAGTAAGGTGAAAAAGGTCTCCTTGAACTAAATGGCAAAAGGAAGTCTTGTAACCCTCACTTTCATCGAAAAGGGTGTGAGTAAGAACTTTGTTGATTTGATGTTTAACTGCTTTGTATTCCCATGAAGTCATGAACAAAAAGTAATAATGATAAACATTTTTAACTAAAAATGTTTGAATCGATCTTCAGGAGCATGCGGTAGCTGCCCTAGCTCAACAACGACCATGAAGATGGGGATCGAACGTGTACTAAAGGAGAAGTTTGGAGATTCAGTGAAGGAAATATGCCAAGTATATGATGAAGAACCAAAGGAGACTACACCTGAGGTGAGTTTTCTGCAGACGAGCAAATACAAAATTGGCTGATGTCAAAATTCAAACAAAAACAAAGTGAGCTGATTTAGTTAGGCAATTTAGTATTAATCCTGGATGTTGCACAAATGCAGGCAGTAAACAGTCACCTTGACATATTGAGGCCAGCCATAAGGAACTACGGTGGGAGCGTGGAAGTAATATCAATTAATGGTGGCGATTGCCTGGTCAAGTATGAGGGTCCTGAATCTATTGGTACAGGAGTTAAAGCAGCCATTAAGGAGAGATTCCCAGATATTACAAACGTTGTGTTTTCAAGCTAACCTTTCCTCAGGTTTCTGAAGCAAAGAGAATATGTATAGCTGCTTCATTTATTGAAAAGTTGGTGCTCATCTTTTTCATAGGCATGTAATGATCTCTTTTCCAATAAATGTTATATATTATTGATAGCCATATCTTATGCTCATAGAAAGGAAGTGCACTTATTTTAAAAGGGTAAACATTGTTCACACAAAATTTTGTTCTGATATAGCAGATTTACATTAACCTTATATCCTTGGACCAAGATTATTTTCTCTGTAAATTACCAGAGCCTCAACTGGCAACATACTCCTGCTAATATATGTAGATTGTTCATTTTAAAAAAAAAATTTACATCATCATTCTTTTAAATCTACTGAAAATGGTACGATCCAACGAATACTGGTATACAAAAATGGAAGTAATGAAAGAAAAAAAAAAGTTTCTCCTCATTTCTGGGTCCATTTACATATAATACACCATCATATAAGAGAACTATCCTGCTGACTCTGCGAGCAGAAAGATAAAACTAGCTAATAGATGTAAGCAAACCAGAGCTTTGGCTTCGTGATGAAGATAAAATGAAGGAAACAGACCGCTGTTAACTCGATTCCACAGATGCTAATGACTCCACAGATGAGGAAATCACGCGTCTTAACCACACCAGCATCAAAGTTCAGTTCAGATAACGATGCTCCAAAAGCTAAATTATATTCTTCAGAGTCTTCCAGCAAAAGC ATGGCGTCCTTAACTACCTCCGGCCTCCTCAAAACCCCTCTTAAGAATTCCCAATCTCCTGCAAATTCTCTCCAATATCCACCTTTTGCTTATGGGCAACATCAACTGCCCGTTTCCCTCAAAAGGGCTTTTCCCGGACGAGCCATTAGAGCTTCACCTTCGAATTCGGGTCCATCCACGACCTCCTCACCAGGGCTGTACTCCGCTCAGAAATTTGAATTGACCATTGGAAACGTGGACTTGGTTCTTGAGGACGTAAGGCCTTATCTAATTGCAGATGGAGGAAATGTCGATGTTGTTTCTGTTGAAGATGGAGTAGTTTCCCTCAAACTCGTTGGAGCATGCGGTAGCTGCCCTAGCTCAACAACGACCATGAAGATGGGGATCGAACGTGTACTAAAGGAGAAGTTTGGAGATTCAGTGAAGGAAATATGCCAAGTATATGATGAAGAACCAAAGGAGACTACACCTGAGGCAGTAAACAGTCACCTTGACATATTGAGGCCAGCCATAAGGAACTACGGTGGGAGCGTGGAAGTAATATCAATTAATGGTGGCGATTGCCTGGTCAAGTATGAGGGTCCTGAATCTATTGGTACAGGAGTTAAAGCAGCCATTAAGGAGAGATTCCCAGATATTACAAACGTTGTGTTTTCAAGCTAA ATGGCGTCCTTAACTACCTCCGGCCTCCTCAAAACCCCTCTTAAGAATTCCCAATCTCCTGCAAATTCTCTCCAATATCCACCTTTTGCTTATGGGCAACATCAACTGCCCGTTTCCCTCAAAAGGGCTTTTCCCGGACGAGCCATTAGAGCTTCACCTTCGAATTCGGGTCCATCCACGACCTCCTCACCAGGGCTGTACTCCGCTCAGAAATTTGAATTGACCATTGGAAACGTGGACTTGGTTCTTGAGGACGTAAGGCCTTATCTAATTGCAGATGGAGGAAATGTCGATGTTGTTTCTGTTGAAGATGGAGTAGTTTCCCTCAAACTCGTTGGAGCATGCGGTAGCTGCCCTAGCTCAACAACGACCATGAAGATGGGGATCGAACGTGTACTAAAGGAGAAGTTTGGAGATTCAGTGAAGGAAATATGCCAAGTATATGATGAAGAACCAAAGGAGACTACACCTGAGGCAGTAAACAGTCACCTTGACATATTGAGGCCAGCCATAAGGAACTACGGTGGGAGCGTGGAAGTAATATCAATTAATGGTGGCGATTGCCTGGTCAAGTATGAGGGTCCTGAATCTATTGGTACAGGAGTTAAAGCAGCCATTAAGGAGAGATTCCCAGATATTACAAACGTTGTGTTTTCAAGCTAA
BLAST of CSPI07G18350 vs. Swiss-Prot
Match: NIFU1_ARATH (NifU-like protein 1, chloroplastic OS=Arabidopsis thaliana GN=NIFU1 PE=1 SV=1) HSP 1 Score: 249.6 bits (636), Expect = 3.2e-65 Identity = 142/230 (61.74%), Postives = 169/230 (73.48%), Query Frame = 1
BLAST of CSPI07G18350 vs. Swiss-Prot
Match: NIFU2_ARATH (NifU-like protein 2, chloroplastic OS=Arabidopsis thaliana GN=NIFU2 PE=1 SV=1) HSP 1 Score: 98.6 bits (244), Expect = 9.1e-20 Identity = 57/148 (38.51%), Postives = 84/148 (56.76%), Query Frame = 1
BLAST of CSPI07G18350 vs. Swiss-Prot
Match: NIFU1_ORYSJ (NifU-like protein 1, chloroplastic OS=Oryza sativa subsp. japonica GN=NIFU1 PE=1 SV=1) HSP 1 Score: 98.2 bits (243), Expect = 1.2e-19 Identity = 70/179 (39.11%), Postives = 98/179 (54.75%), Query Frame = 1
BLAST of CSPI07G18350 vs. Swiss-Prot
Match: NIFU3_ARATH (NifU-like protein 3, chloroplastic OS=Arabidopsis thaliana GN=NIFU3 PE=2 SV=1) HSP 1 Score: 90.1 bits (222), Expect = 3.2e-17 Identity = 56/139 (40.29%), Postives = 83/139 (59.71%), Query Frame = 1
BLAST of CSPI07G18350 vs. Swiss-Prot
Match: YUTI_BACSU (Putative nitrogen fixation protein YutI OS=Bacillus subtilis (strain 168) GN=yutI PE=3 SV=1) HSP 1 Score: 75.9 bits (185), Expect = 6.3e-13 Identity = 37/70 (52.86%), Postives = 53/70 (75.71%), Query Frame = 1
BLAST of CSPI07G18350 vs. TrEMBL
Match: A0A0A0KB98_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G412870 PE=4 SV=1) HSP 1 Score: 435.3 bits (1118), Expect = 4.6e-119 Identity = 220/220 (100.00%), Postives = 220/220 (100.00%), Query Frame = 1
BLAST of CSPI07G18350 vs. TrEMBL
Match: A0A140B480_PRUPE (NFU domain protein 1 OS=Prunus persica var. persica GN=NFU1 PE=2 SV=1) HSP 1 Score: 300.1 bits (767), Expect = 2.3e-78 Identity = 158/219 (72.15%), Postives = 179/219 (81.74%), Query Frame = 1
BLAST of CSPI07G18350 vs. TrEMBL
Match: M5XUC8_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011214mg PE=4 SV=1) HSP 1 Score: 300.1 bits (767), Expect = 2.3e-78 Identity = 158/219 (72.15%), Postives = 179/219 (81.74%), Query Frame = 1
BLAST of CSPI07G18350 vs. TrEMBL
Match: W9R6P7_9ROSA (NifU-like protein 1 OS=Morus notabilis GN=L484_018769 PE=4 SV=1) HSP 1 Score: 296.2 bits (757), Expect = 3.3e-77 Identity = 152/219 (69.41%), Postives = 176/219 (80.37%), Query Frame = 1
BLAST of CSPI07G18350 vs. TrEMBL
Match: B9RNA2_RICCO (Nitrogen fixation protein nifU, putative OS=Ricinus communis GN=RCOM_1345940 PE=4 SV=1) HSP 1 Score: 278.1 bits (710), Expect = 9.3e-72 Identity = 151/217 (69.59%), Postives = 172/217 (79.26%), Query Frame = 1
BLAST of CSPI07G18350 vs. TAIR10
Match: AT4G01940.1 (AT4G01940.1 NFU domain protein 1) HSP 1 Score: 249.6 bits (636), Expect = 1.8e-66 Identity = 142/230 (61.74%), Postives = 169/230 (73.48%), Query Frame = 1
BLAST of CSPI07G18350 vs. TAIR10
Match: AT5G49940.1 (AT5G49940.1 NIFU-like protein 2) HSP 1 Score: 98.6 bits (244), Expect = 5.1e-21 Identity = 57/148 (38.51%), Postives = 84/148 (56.76%), Query Frame = 1
BLAST of CSPI07G18350 vs. TAIR10
Match: AT4G25910.1 (AT4G25910.1 NFU domain protein 3) HSP 1 Score: 90.1 bits (222), Expect = 1.8e-18 Identity = 56/139 (40.29%), Postives = 83/139 (59.71%), Query Frame = 1
BLAST of CSPI07G18350 vs. TAIR10
Match: AT3G20970.1 (AT3G20970.1 NFU domain protein 4) HSP 1 Score: 54.7 bits (130), Expect = 8.5e-08 Identity = 32/85 (37.65%), Postives = 50/85 (58.82%), Query Frame = 1
BLAST of CSPI07G18350 vs. TAIR10
Match: AT1G51390.1 (AT1G51390.1 NFU domain protein 5) HSP 1 Score: 53.1 bits (126), Expect = 2.5e-07 Identity = 31/85 (36.47%), Postives = 50/85 (58.82%), Query Frame = 1
BLAST of CSPI07G18350 vs. NCBI nr
Match: gi|449436401|ref|XP_004135981.1| (PREDICTED: nifU-like protein 1, chloroplastic [Cucumis sativus]) HSP 1 Score: 435.3 bits (1118), Expect = 6.5e-119 Identity = 220/220 (100.00%), Postives = 220/220 (100.00%), Query Frame = 1
BLAST of CSPI07G18350 vs. NCBI nr
Match: gi|659101131|ref|XP_008451442.1| (PREDICTED: nifU-like protein 1, chloroplastic [Cucumis melo]) HSP 1 Score: 426.4 bits (1095), Expect = 3.0e-116 Identity = 214/220 (97.27%), Postives = 218/220 (99.09%), Query Frame = 1
BLAST of CSPI07G18350 vs. NCBI nr
Match: gi|596109907|ref|XP_007221501.1| (hypothetical protein PRUPE_ppa011214mg [Prunus persica]) HSP 1 Score: 300.1 bits (767), Expect = 3.3e-78 Identity = 158/219 (72.15%), Postives = 179/219 (81.74%), Query Frame = 1
BLAST of CSPI07G18350 vs. NCBI nr
Match: gi|1009148079|ref|XP_015891751.1| (PREDICTED: nifU-like protein 1, chloroplastic [Ziziphus jujuba]) HSP 1 Score: 297.0 bits (759), Expect = 2.8e-77 Identity = 156/219 (71.23%), Postives = 174/219 (79.45%), Query Frame = 1
BLAST of CSPI07G18350 vs. NCBI nr
Match: gi|470104310|ref|XP_004288551.1| (PREDICTED: nifU-like protein 1, chloroplastic [Fragaria vesca subsp. vesca]) HSP 1 Score: 296.6 bits (758), Expect = 3.6e-77 Identity = 156/224 (69.64%), Postives = 184/224 (82.14%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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