CSPI07G17680 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI07G17680
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionUnknown protein
LocationChr7 : 15951683 .. 15953015 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GCAGCTCAGGCCAAAATAAACTATTTTCTCATATATATAAATTTAACCGGGGCTATTGAAAGGTTATTAATAGTTACTCGACTTTAAAATTGATTGCAAAAGGTTATTAATAGTTATTCGACTTTTAAATTGGTTGCTTTTGCAATTTAGAAAATGTTTTGACATATCGTCTATGAATTTAGAACAAACAATGTGTTTTGGAACAAAATCATAATGTTGTTGGGACACAGAAAGTATTGTGTGAGCCAAAAATCTTTTGATTCAATTAAGACAAATATTGAGTTTGAATAGTGGGTTGGAATTAGGCAATACAATATATAGCCTTAAGTTGCTAATGTTGAGCATTGAAAGCTCCATGAGAAAAAACGCTACCGCTAACGGTGCTTGTAGTTTGGTGATGAGTATGAACAACAACGCTACTGCTGCCACTTGTGTGAATACCATCAGCCCCCTTTGTAGTTTGGATATTGTTAGAAGAAAAAAAGCTTTTGCTGCTTCTATGATTAGTATGGATTCCATGAGAAAATAAACCAGCACCACCACGAATCATGGCAGCTCCATGTCCATGAGAAACAACAGTACTGGTGGCGCTCTTCACTCTAGTTTCCTGACCGCTGGCCACGACGACACTCCTGCTCCCCCTGTTCGCACCGATTTTGCCTTTATGAGAAATGACAACACTGCTGCCACTCTTTGCACTTACTTCGTGACCGGTAGATACAGCAACAGTACTACTGCCTCCATTCACACCGGTCTTGGAACCACGGGAAACAATGATGCTGCTGCTACCCTTCTTCGTGATTTCTTGACCTTGAGAAACTGCAACCAAACTACTACTGCCGTTGTTCACACCGGTTTTGCCACCATGAGAAACAATAACACTACTAGCACCACTCTTCTTGCTAATTTCATGACCACTAGAAATCGCAACGACACTTCCGCGGTTGGCGTTCGGACCAGTTTTTCTACCATGAGAAACGACAACACTACCGGCACTTTTTGCCGTGCTAATTTCATGACCTTGAGAAACAACAAGAACTTTTCCACCGACACTGCTCACAGGTGCGACCGCTGATGCTTGTGTGCCGTGTGATCCAAAGGCACGGATGGGTAATTTACGATCGAGAGCGGGTTCTACGCTACCAGTGACGTCACCGAAGGTGGCACCCACCTTCCCACAGCATTGCCAAGCAAGCACTAAGAAAAGGGTGTGAAAGAGCTTGAAACCATTTGGTGCCATTTCCATGGTAGAAATGGTGTGATTAGTTGAAATTATTGTAGGTTTACAAGCTCTTTTCACAAAATGCGAAGGGGAAGTATGAGTGCCTTGGAT

mRNA sequence

ATGTCCATGAGAAACAACAGTACTGGTGGCGCTCTTCACTCTAGTTTCCTGACCGCTGGCCACGACGACACTCCTGCTCCCCCTGTTCGCACCGATTTTGCCTTTATGAGAAATGACAACACTGCTGCCACTCTTTGCACTTACTTCGTGACCGGTAGATACAGCAACAGTACTACTGCCTCCATTCACACCGGTCTTGGAACCACGGGAAACAATGATGCTGCTGCTACCCTTCTTCGTGATTTCTTGACCTTGAGAAACTGCAACCAAACTACTACTGCCGTTGTTCACACCGGTTTTGCCACCATGAGAAACAATAACACTACTAGCACCACTCTTCTTGCTAATTTCATGACCACTAGAAATCGCAACGACACTTCCGCGGTTGGCGTTCGGACCAGTTTTTCTACCATGAGAAACGACAACACTACCGGCACTTTTTGCCGTGCTAATTTCATGACCTTGAGAAACAACAAGAACTTTTCCACCGACACTGCTCACAGGTGCGACCGCTGA

Coding sequence (CDS)

ATGTCCATGAGAAACAACAGTACTGGTGGCGCTCTTCACTCTAGTTTCCTGACCGCTGGCCACGACGACACTCCTGCTCCCCCTGTTCGCACCGATTTTGCCTTTATGAGAAATGACAACACTGCTGCCACTCTTTGCACTTACTTCGTGACCGGTAGATACAGCAACAGTACTACTGCCTCCATTCACACCGGTCTTGGAACCACGGGAAACAATGATGCTGCTGCTACCCTTCTTCGTGATTTCTTGACCTTGAGAAACTGCAACCAAACTACTACTGCCGTTGTTCACACCGGTTTTGCCACCATGAGAAACAATAACACTACTAGCACCACTCTTCTTGCTAATTTCATGACCACTAGAAATCGCAACGACACTTCCGCGGTTGGCGTTCGGACCAGTTTTTCTACCATGAGAAACGACAACACTACCGGCACTTTTTGCCGTGCTAATTTCATGACCTTGAGAAACAACAAGAACTTTTCCACCGACACTGCTCACAGGTGCGACCGCTGA
Homology
[Close]
BLAST of CSPI07G17680 vs. TrEMBL
Match: A0A0A0K7V9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G398745 PE=4 SV=1)

HSP 1 Score: 328.6 bits (841), Expect = 4.7e-87
Identity = 170/171 (99.42%), Postives = 170/171 (99.42%), Query Frame = 1 

Query: 1   MSMRNNSTGGALHSSFLTAGHDDTPAPPVRTDFAFMRNDNTAATLCTYFVTGRYSNSTTA 60
           MSMRNNSTGGALHSSFLTAGHDDTPAPPV TDFAFMRNDNTAATLCTYFVTGRYSNSTTA
Sbjct: 1   MSMRNNSTGGALHSSFLTAGHDDTPAPPVGTDFAFMRNDNTAATLCTYFVTGRYSNSTTA 60

Query: 61  SIHTGLGTTGNNDAAATLLRDFLTLRNCNQTTTAVVHTGFATMRNNNTTSTTLLANFMTT 120
           SIHTGLGTTGNNDAAATLLRDFLTLRNCNQTTTAVVHTGFATMRNNNTTSTTLLANFMTT
Sbjct: 61  SIHTGLGTTGNNDAAATLLRDFLTLRNCNQTTTAVVHTGFATMRNNNTTSTTLLANFMTT 120

Query: 121 RNRNDTSAVGVRTSFSTMRNDNTTGTFCRANFMTLRNNKNFSTDTAHRCDR 172
           RNRNDTSAVGVRTSFSTMRNDNTTGTFCRANFMTLRNNKNFSTDTAHRCDR
Sbjct: 121 RNRNDTSAVGVRTSFSTMRNDNTTGTFCRANFMTLRNNKNFSTDTAHRCDR 171

[Close]
BLAST of CSPI07G17680 vs. NCBI nr
Match: gi|700189731|gb|KGN44964.1| (hypothetical protein Csa_7G398745 [Cucumis sativus])

HSP 1 Score: 328.6 bits (841), Expect = 6.7e-87
Identity = 170/171 (99.42%), Postives = 170/171 (99.42%), Query Frame = 1 

Query: 1   MSMRNNSTGGALHSSFLTAGHDDTPAPPVRTDFAFMRNDNTAATLCTYFVTGRYSNSTTA 60
           MSMRNNSTGGALHSSFLTAGHDDTPAPPV TDFAFMRNDNTAATLCTYFVTGRYSNSTTA
Sbjct: 1   MSMRNNSTGGALHSSFLTAGHDDTPAPPVGTDFAFMRNDNTAATLCTYFVTGRYSNSTTA 60

Query: 61  SIHTGLGTTGNNDAAATLLRDFLTLRNCNQTTTAVVHTGFATMRNNNTTSTTLLANFMTT 120
           SIHTGLGTTGNNDAAATLLRDFLTLRNCNQTTTAVVHTGFATMRNNNTTSTTLLANFMTT
Sbjct: 61  SIHTGLGTTGNNDAAATLLRDFLTLRNCNQTTTAVVHTGFATMRNNNTTSTTLLANFMTT 120

Query: 121 RNRNDTSAVGVRTSFSTMRNDNTTGTFCRANFMTLRNNKNFSTDTAHRCDR 172
           RNRNDTSAVGVRTSFSTMRNDNTTGTFCRANFMTLRNNKNFSTDTAHRCDR
Sbjct: 121 RNRNDTSAVGVRTSFSTMRNDNTTGTFCRANFMTLRNNKNFSTDTAHRCDR 171

The following BLAST results are available for this feature:
BLAST of CSPI07G17680 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CSPI07G17680 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K7V9_CUCSA4.7e-8799.42Uncharacterized protein OS=Cucumis sativus GN=Csa_7G398745 PE=4 SV=1[more]
BLAST of CSPI07G17680 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CSPI07G17680 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700189731|gb|KGN44964.1|6.7e-8799.42hypothetical protein Csa_7G398745 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI07G17680.1CSPI07G17680.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CSPI07G17680Bhi09G000739Wax gourdcpiwgoB703
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CSPI07G17680Melon (DHL92) v3.6.1cpimedB520
CSPI07G17680Melon (DHL92) v3.6.1cpimedB525
CSPI07G17680Melon (DHL92) v3.6.1cpimedB557
CSPI07G17680Cucumber (Gy14) v2cgybcpiB331
CSPI07G17680Silver-seed gourdcarcpiB0124
CSPI07G17680Silver-seed gourdcarcpiB0599
CSPI07G17680Silver-seed gourdcarcpiB0855
CSPI07G17680Cucumber (Chinese Long) v3cpicucB402
CSPI07G17680Cucumber (Chinese Long) v3cpicucB414
CSPI07G17680Watermelon (97103) v2cpiwmbB541
CSPI07G17680Watermelon (97103) v2cpiwmbB590
CSPI07G17680Watermelon (97103) v2cpiwmbB598
CSPI07G17680Wax gourdcpiwgoB658
CSPI07G17680Wax gourdcpiwgoB666
CSPI07G17680Cucurbita maxima (Rimu)cmacpiB934
CSPI07G17680Wild cucumber (PI 183967)cpicpiB167
CSPI07G17680Cucumber (Gy14) v1cgycpiB106
CSPI07G17680Cucumber (Gy14) v1cgycpiB325
CSPI07G17680Cucurbita maxima (Rimu)cmacpiB392
CSPI07G17680Cucurbita moschata (Rifu)cmocpiB381
CSPI07G17680Cucurbita moschata (Rifu)cmocpiB913
CSPI07G17680Cucumber (Chinese Long) v2cpicuB345
CSPI07G17680Cucumber (Chinese Long) v2cpicuB354
CSPI07G17680Melon (DHL92) v3.5.1cpimeB540
CSPI07G17680Melon (DHL92) v3.5.1cpimeB572
CSPI07G17680Watermelon (Charleston Gray)cpiwcgB547
CSPI07G17680Watermelon (Charleston Gray)cpiwcgB555
CSPI07G17680Watermelon (Charleston Gray)cpiwcgB560
CSPI07G17680Watermelon (97103) v1cpiwmB578
CSPI07G17680Watermelon (97103) v1cpiwmB587
CSPI07G17680Watermelon (97103) v1cpiwmB593
CSPI07G17680Cucurbita pepo (Zucchini)cpecpiB163
CSPI07G17680Cucurbita pepo (Zucchini)cpecpiB344
CSPI07G17680Bottle gourd (USVL1VR-Ls)cpilsiB517
CSPI07G17680Bottle gourd (USVL1VR-Ls)cpilsiB530