CSPI07G11800 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI07G11800
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionUnknown protein
LocationChr7 : 10002448 .. 10004162 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTTCAAAGTTTCAAAAACAATAGGCTTCTAAACAAATAAGTTCACTTGTGAAAAACTGAAAACCAAATTTTAGAAAATAAAATAACAAACAGAGCCATTTTCATAGACATCCTTCTCACTTGTACTGTCTAGATAGTTTCAATGTGATAAATACACCTCTTAACACTTTAAAATTGAAATCATACGCATAAATAATTGAGTTTTCAAATAAAAATACAAAGAGAATGGAGCTCAACCCAACTTATGCACACCTTCACACATTGCTTTCATGCTAAGAAGAATGCTGAAACTAAGATACCCAAAGAGAAAGAGAGATGTATAAACATATAATGGAACTGGTAAAAGAGATGGTCTCATTTAAGAGTTGTTTTTCCATCACTTCCCTTCCCTCTCTTTCTCATTGTGCACATTCCTGGAGCTAAACTAACCAAGCAAAAAGACATCTTACAAAGTGTCCAGGACATCGATCACATTGGAATATCAATTCAACACATTTTTTCATTCTTAGGTGGGGAGAGAACCAAGCAAATAAAACTAACAGAAATACTAGATGAATAAATTATCTATAGATGAAGAGTGGTATCGACATTTGGACTATCGAAACTTCTAAATGTACTCACCATGAATGAGTTTCCAAGCTCGAACTTGGTGTCACCTGGCATCGACCTGGCTTCATGGATATCAATATCAACTTGCTTACCTGCATTATTCTCCAAGTTCAAACCAAGGGAGAGGGAATTGGAATCCAAATCTCTTGAGGTCGACGAGCCATTTGGTTCTAAATGCATTATCGAGGCGTCAACCCTATTAGATTCGAATAGCAGGTTAAGAAGCTCCTTCCTCTCTCTCCTTTGCTTGTTTTTCTGCAATTGTCTGAATCTCTCTTGTAACAGCGCTATGGAGGTACCAACCATGGTAGGTTCACTATTGTGTCTACCCATTGGAGAATACACTCAAGGGGAGTTTAAGCTGCAGCTGCTTATAGTATGTGAAGTTTACATAGTTATGGAGATCAATGTGTACTTATAAGATATTAGGATTAGAATGTTTTGCTCTTATCATTAGAATAGGGGAACAGAGTCGTTTCTGATTGATTAGTGATGTGATACCGAAGAGAATCAGCTGGCTTGTAAGAAAATCCAAATAGCAAGAGTTTAAAAAAGGCTGGTCTAGAGAGGGTTGGGTTGGTGAATATTTTAGGGAAAATGACTTTTGATGGAAAGAAAATGTATGTAACAAGTCCAAACTAAAAATGGATGGTAGTGTTTGGAAAGAAGCTTAAGGAATAAAAACTAAAAAGTTTAGGTAATGGTATGTGTCATGTTTTTGGACTCTTGCAATTCCTTTCACAACAAAGATTTTTTTTTTTTCATGGCTTTTGAATAGGGTTGTAAAAAGAGGGCCAGGGGAAGTGAGAATGTGCAGAGAAGACAAGGTTTAGGTTTAGGTTTAGGAGGAATATTTTGGATTAAAGATGACTTTTAATAAGGGCCCCCAACATAATGCAATGCATGACATGAAAGAGAGAAAGAGAACAAGAACATAATGTTGTTGTCTTCCTTCCAGACATCTCTACTAACCATTTTCATTTTCTACTTTGTTTCAATATCAGTTTTGGAGTATCTGAAACAAAAACTTTGCTCCACGTCAAATCTGAAATGGAAGCAACCCAAGACTTCAACAAACTGTATTGCTTGATGTAATCTAGTTTTGAG

mRNA sequence

ATGAATGAGTTTCCAAGCTCGAACTTGGTGTCACCTGGCATCGACCTGGCTTCATGGATATCAATATCAACTTGCTTACCTGCATTATTCTCCAAGTTCAAACCAAGGGAGAGGGAATTGGAATCCAAATCTCTTGAGGTCGACGAGCCATTTGGTTCTAAATGCATTATCGAGGCGTCAACCCTATTAGATTCGAATAGCAGGTTAAGAAGCTCCTTCCTCTCTCTCCTTTGCTTGTTTTTCTGCAATTGTCTGAATCTCTCTTGTAACAGCGCTATGGAGGTACCAACCATGGTAGGTTCACTATTGTGTCTACCCATTGGAGAATACACTCAAGGGGAGTTTAAGCTGCAGCTGCTTATAGTATGTGAAGTTTACATAGTTATGGAGATCAATGTGTACTTATAA

Coding sequence (CDS)

ATGAATGAGTTTCCAAGCTCGAACTTGGTGTCACCTGGCATCGACCTGGCTTCATGGATATCAATATCAACTTGCTTACCTGCATTATTCTCCAAGTTCAAACCAAGGGAGAGGGAATTGGAATCCAAATCTCTTGAGGTCGACGAGCCATTTGGTTCTAAATGCATTATCGAGGCGTCAACCCTATTAGATTCGAATAGCAGGTTAAGAAGCTCCTTCCTCTCTCTCCTTTGCTTGTTTTTCTGCAATTGTCTGAATCTCTCTTGTAACAGCGCTATGGAGGTACCAACCATGGTAGGTTCACTATTGTGTCTACCCATTGGAGAATACACTCAAGGGGAGTTTAAGCTGCAGCTGCTTATAGTATGTGAAGTTTACATAGTTATGGAGATCAATGTGTACTTATAA
Homology
[Close]
BLAST of CSPI07G11800 vs. TrEMBL
Match: A0A0A0K3U6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G272120 PE=4 SV=1)

HSP 1 Score: 266.9 bits (681), Expect = 1.3e-68
Identity = 135/135 (100.00%), Postives = 135/135 (100.00%), Query Frame = 1 

Query: 1   MNEFPSSNLVSPGIDLASWISISTCLPALFSKFKPRERELESKSLEVDEPFGSKCIIEAS 60
           MNEFPSSNLVSPGIDLASWISISTCLPALFSKFKPRERELESKSLEVDEPFGSKCIIEAS
Sbjct: 1   MNEFPSSNLVSPGIDLASWISISTCLPALFSKFKPRERELESKSLEVDEPFGSKCIIEAS 60

Query: 61  TLLDSNSRLRSSFLSLLCLFFCNCLNLSCNSAMEVPTMVGSLLCLPIGEYTQGEFKLQLL 120
           TLLDSNSRLRSSFLSLLCLFFCNCLNLSCNSAMEVPTMVGSLLCLPIGEYTQGEFKLQLL
Sbjct: 61  TLLDSNSRLRSSFLSLLCLFFCNCLNLSCNSAMEVPTMVGSLLCLPIGEYTQGEFKLQLL 120

Query: 121 IVCEVYIVMEINVYL 136
           IVCEVYIVMEINVYL
Sbjct: 121 IVCEVYIVMEINVYL 135

[Close]
BLAST of CSPI07G11800 vs. NCBI nr
Match: gi|700189137|gb|KGN44370.1| (hypothetical protein Csa_7G272120 [Cucumis sativus])

HSP 1 Score: 266.9 bits (681), Expect = 1.9e-68
Identity = 135/135 (100.00%), Postives = 135/135 (100.00%), Query Frame = 1 

Query: 1   MNEFPSSNLVSPGIDLASWISISTCLPALFSKFKPRERELESKSLEVDEPFGSKCIIEAS 60
           MNEFPSSNLVSPGIDLASWISISTCLPALFSKFKPRERELESKSLEVDEPFGSKCIIEAS
Sbjct: 1   MNEFPSSNLVSPGIDLASWISISTCLPALFSKFKPRERELESKSLEVDEPFGSKCIIEAS 60

Query: 61  TLLDSNSRLRSSFLSLLCLFFCNCLNLSCNSAMEVPTMVGSLLCLPIGEYTQGEFKLQLL 120
           TLLDSNSRLRSSFLSLLCLFFCNCLNLSCNSAMEVPTMVGSLLCLPIGEYTQGEFKLQLL
Sbjct: 61  TLLDSNSRLRSSFLSLLCLFFCNCLNLSCNSAMEVPTMVGSLLCLPIGEYTQGEFKLQLL 120

Query: 121 IVCEVYIVMEINVYL 136
           IVCEVYIVMEINVYL
Sbjct: 121 IVCEVYIVMEINVYL 135

The following BLAST results are available for this feature:
BLAST of CSPI07G11800 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CSPI07G11800 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K3U6_CUCSA1.3e-68100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_7G272120 PE=4 SV=1[more]
BLAST of CSPI07G11800 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CSPI07G11800 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700189137|gb|KGN44370.1|1.9e-68100.00hypothetical protein Csa_7G272120 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI07G11800.1CSPI07G11800.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CSPI07G11800Csa7G272120Cucumber (Chinese Long) v2cpicuB354
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CSPI07G11800Watermelon (97103) v2cpiwmbB594
CSPI07G11800Wax gourdcpiwgoB714
CSPI07G11800Wax gourdcpiwgoB718
CSPI07G11800Cucumber (Gy14) v1cgycpiB364
CSPI07G11800Cucurbita maxima (Rimu)cmacpiB500
CSPI07G11800Cucurbita moschata (Rifu)cmocpiB039
CSPI07G11800Cucurbita moschata (Rifu)cmocpiB490
CSPI07G11800Melon (DHL92) v3.5.1cpimeB532
CSPI07G11800Watermelon (Charleston Gray)cpiwcgB550
CSPI07G11800Watermelon (97103) v1cpiwmB582
CSPI07G11800Cucurbita pepo (Zucchini)cpecpiB471
CSPI07G11800Bottle gourd (USVL1VR-Ls)cpilsiB517
CSPI07G11800Bottle gourd (USVL1VR-Ls)cpilsiB528
CSPI07G11800Melon (DHL92) v3.6.1cpimedB515
CSPI07G11800Cucumber (Gy14) v2cgybcpiB331
CSPI07G11800Cucumber (Chinese Long) v3cpicucB414