CSPI07G09760 (gene) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI07G09760
Type	gene
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	Unknown protein
Location	Chr7 : 7728054 .. 7729135 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAATTCTTCAAACTCTTTGACATGTTCCTGATTTCTTGTTCTGAGTTTACCATGCTGGTTCTTGAGTTTAAGGAGCAGCTTTTTTTCCATAAACCTCTTCGCTTCCTCACCGAAGCTTTGAAGATGATCACCTTCGCTTTGTTCCTCTCTCTTCTCGCTCTAGGTATGCTGTCTCATCTCAATAAACTATTTGATACACTATAACACACCATAGATTGGGGTTTAATTAATAATATGGTTGCGAAAATATATAGTAAAAGAATCAGTATAATTGTTTTTGTTTTTCCGCCCTAAATTTAATTTGTACAGTTGGTGCGTCTGTGGGAACTGTGATCGGAGCCTTCAAAGGGCATGGCACGGGGATAGGCGCTATTGCCGGCGCGGCCGTAGCCCTTCAGATATTCAGCTCCAGTGCATCCGGGCATAGATATTGTTTATCAAGGGTAGGCTTTTCAGTATATCAAAGGTTAGAAGGAAAAATGTCATTTGAAATAAATGGATATGTTTTTCTAGTCAAATTCATAAAACTTTAAAACTTTAAGTTATAGGTTTATTTCTTTAATTGTGTGTTTAAAATTAACACATAACTAAACTCTAAAAATGGCTAACAACCTTTTATATTTAATACATTTATATTTTGGATTTAATTTTTTTTTAAAAAATGAAGTGATGTATATTAATTATAAAAGTAAATTTGGACCTATATTTTTAATTTTGTATTTACTGGATATATGAAATATTTATGAACCAAAATAAAATAAAGTAAAATACCTATTAGATATAAAATTAAAAATTTCAAACCAATCATTACACTCTACAATTTGGAGAACAATTAGGTAATATTTTATAGACTAAATTTATTTGCTAAATTTACAGCAATATTTACTATTAGATTGAGCCTAGCTAATTGCTATATTTACTATGTATTTTTAAAAAATATATCAAATAATTAACTTTTAATATCAATGTTTTTATCCTTTTTTCCCTCTTCCTTAGACTGCATTTGATTGTGGCAGGAAGCAATAATGGAGAGGCTGATGGATGGGAAGGGGTTGATGAACTGGGTAAGTGAAAAAGCT

mRNA sequence

ATGCAATTCTTCAAACTCTTTGACATGTTCCTGATTTCTTGTTCTGAGTTTACCATGCTGGTTCTTGAGTTTAAGGAGCAGCTTTTTTTCCATAAACCTCTTCGCTTCCTCACCGAAGCTTTGAAGATGATCACCTTCGCTTTGTTCCTCTCTCTTCTCGCTCTAGTTGGTGCGTCTGTGGGAACTGTGATCGGAGCCTTCAAAGGGCATGGCACGGGGATAGGCGCTATTGCCGGCGCGGCCGTAGCCCTTCAGATATTCAGCTCCAGTGCATCCGGGCATAGATATTGTTTATCAAGGGAAGCAATAATGGAGAGGCTGATGGATGGGAAGGGGTTGATGAACTGGGTAAGTGAAAAAGCT

Coding sequence (CDS)

ATGCAATTCTTCAAACTCTTTGACATGTTCCTGATTTCTTGTTCTGAGTTTACCATGCTGGTTCTTGAGTTTAAGGAGCAGCTTTTTTTCCATAAACCTCTTCGCTTCCTCACCGAAGCTTTGAAGATGATCACCTTCGCTTTGTTCCTCTCTCTTCTCGCTCTAGTTGGTGCGTCTGTGGGAACTGTGATCGGAGCCTTCAAAGGGCATGGCACGGGGATAGGCGCTATTGCCGGCGCGGCCGTAGCCCTTCAGATATTCAGCTCCAGTGCATCCGGGCATAGATATTGTTTATCAAGGGAAGCAATAATGGAGAGGCTGATGGATGGGAAGGGGTTGATGAACTGGGTAAGTGAAAAAGCT

Homology

[Close]

BLAST of CSPI07G09760 vs. TrEMBL
Match: A0A0A0K5D1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G209550 PE=4 SV=1)

HSP 1 Score: 218.0 bits (554), Expect = 6.3e-54
Identity = 117/118 (99.15%), Postives = 117/118 (99.15%), Query Frame = 1


Query: 1   MQFFKLFDMFLISCSEFTMLVLEFKEQLFFHKPLRFLTEALKMITFALFLSLLALVGASV 60
           MQFFKLFDMFLISCSEFTMLVLEFKEQLFFHKPLRFLTEALKMITFALFLSLLALVGASV
Sbjct: 1   MQFFKLFDMFLISCSEFTMLVLEFKEQLFFHKPLRFLTEALKMITFALFLSLLALVGASV 60

Query: 61  GTVIGAFKGHGTGIGAIAGAAVALQIFSSSASGHRYCLSREAIMERLMDGKGLMNWVS 119
           GTVIGAFKGHGTGIGAIAGAAVALQIFSSSASGHRYCLSREAIMERLMDGKGLMNW S
Sbjct: 61  GTVIGAFKGHGTGIGAIAGAAVALQIFSSSASGHRYCLSREAIMERLMDGKGLMNWAS 118

[Close]

BLAST of CSPI07G09760 vs. TrEMBL
Match: A0A067FHR5_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g024603mg PE=4 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 1.5e-07
Identity = 40/90 (44.44%), Postives = 53/90 (58.89%), Query Frame = 1


Query: 37  LTEALKMITFALFLSLLALVGASVGTVIGAFKG--------HGTGIGAIAGAAVALQIFS 96
           L  A+K + +A    + AL GA VGT+ GA KG        HG GIGA+AGA  ALQ+  
Sbjct: 36  LIRAMKRVLYAALTCIFALGGAIVGTIFGAMKGQTTETGFLHGAGIGAVAGAITALQLLE 95

Query: 97  SSASGHRYCLSREAIMERLMDGKGLMNWVS 119
           S+A G    LS+ A++  L++GK  M WVS
Sbjct: 96  SAADGE--SLSKAALLSSLVNGKVFMEWVS 123

[Close]

BLAST of CSPI07G09760 vs. TrEMBL
Match: A0A067FH05_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g024603mg PE=4 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 1.5e-07
Identity = 40/90 (44.44%), Postives = 53/90 (58.89%), Query Frame = 1


Query: 37  LTEALKMITFALFLSLLALVGASVGTVIGAFKG--------HGTGIGAIAGAAVALQIFS 96
           L  A+K + +A    + AL GA VGT+ GA KG        HG GIGA+AGA  ALQ+  
Sbjct: 36  LIRAMKRVLYAALTCIFALGGAIVGTIFGAMKGQTTETGFLHGAGIGAVAGAITALQLLE 95

Query: 97  SSASGHRYCLSREAIMERLMDGKGLMNWVS 119
           S+A G    LS+ A++  L++GK  M WVS
Sbjct: 96  SAADGE--SLSKAALLSSLVNGKVFMEWVS 123

[Close]

BLAST of CSPI07G09760 vs. TrEMBL
Match: A0A067F9B8_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g024603mg PE=4 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 1.5e-07
Identity = 40/90 (44.44%), Postives = 53/90 (58.89%), Query Frame = 1


Query: 37  LTEALKMITFALFLSLLALVGASVGTVIGAFKG--------HGTGIGAIAGAAVALQIFS 96
           L  A+K + +A    + AL GA VGT+ GA KG        HG GIGA+AGA  ALQ+  
Sbjct: 36  LIRAMKRVLYAALTCIFALGGAIVGTIFGAMKGQTTETGFLHGAGIGAVAGAITALQLLE 95

Query: 97  SSASGHRYCLSREAIMERLMDGKGLMNWVS 119
           S+A G    LS+ A++  L++GK  M WVS
Sbjct: 96  SAADGE--SLSKAALLSSLVNGKVFMEWVS 123

[Close]

BLAST of CSPI07G09760 vs. TrEMBL
Match: V4TYA4_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10009352mg PE=4 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 1.5e-07
Identity = 40/90 (44.44%), Postives = 53/90 (58.89%), Query Frame = 1


Query: 37  LTEALKMITFALFLSLLALVGASVGTVIGAFKG--------HGTGIGAIAGAAVALQIFS 96
           L  A+K + +A    + AL GA VGT+ GA KG        HG GIGA+AGA  ALQ+  
Sbjct: 36  LIRAMKRVLYAALTCIFALGGAIVGTIFGAMKGQTTETGFLHGAGIGAVAGAITALQLLE 95

Query: 97  SSASGHRYCLSREAIMERLMDGKGLMNWVS 119
           S+A G    LS+ A++  L++GK  M WVS
Sbjct: 96  SAADGE--SLSKAALLSSLVNGKVFMEWVS 123

[Close]

BLAST of CSPI07G09760 vs. NCBI nr
Match: gi|700188926|gb|KGN44159.1| (hypothetical protein Csa_7G209550 [Cucumis sativus])

HSP 1 Score: 218.0 bits (554), Expect = 9.0e-54
Identity = 117/118 (99.15%), Postives = 117/118 (99.15%), Query Frame = 1


Query: 1   MQFFKLFDMFLISCSEFTMLVLEFKEQLFFHKPLRFLTEALKMITFALFLSLLALVGASV 60
           MQFFKLFDMFLISCSEFTMLVLEFKEQLFFHKPLRFLTEALKMITFALFLSLLALVGASV
Sbjct: 1   MQFFKLFDMFLISCSEFTMLVLEFKEQLFFHKPLRFLTEALKMITFALFLSLLALVGASV 60

Query: 61  GTVIGAFKGHGTGIGAIAGAAVALQIFSSSASGHRYCLSREAIMERLMDGKGLMNWVS 119
           GTVIGAFKGHGTGIGAIAGAAVALQIFSSSASGHRYCLSREAIMERLMDGKGLMNW S
Sbjct: 61  GTVIGAFKGHGTGIGAIAGAAVALQIFSSSASGHRYCLSREAIMERLMDGKGLMNWAS 118

[Close]

BLAST of CSPI07G09760 vs. NCBI nr
Match: gi|778725640|ref|XP_011658973.1| (PREDICTED: NEP1-interacting protein-like 1 [Cucumis sativus])

HSP 1 Score: 203.4 bits (516), Expect = 2.3e-49
Identity = 109/110 (99.09%), Postives = 109/110 (99.09%), Query Frame = 1


Query: 9   MFLISCSEFTMLVLEFKEQLFFHKPLRFLTEALKMITFALFLSLLALVGASVGTVIGAFK 68
           MFLISCSEFTMLVLEFKEQLFFHKPLRFLTEALKMITFALFLSLLALVGASVGTVIGAFK
Sbjct: 1   MFLISCSEFTMLVLEFKEQLFFHKPLRFLTEALKMITFALFLSLLALVGASVGTVIGAFK 60

Query: 69  GHGTGIGAIAGAAVALQIFSSSASGHRYCLSREAIMERLMDGKGLMNWVS 119
           GHGTGIGAIAGAAVALQIFSSSASGHRYCLSREAIMERLMDGKGLMNW S
Sbjct: 61  GHGTGIGAIAGAAVALQIFSSSASGHRYCLSREAIMERLMDGKGLMNWAS 110

[Close]

BLAST of CSPI07G09760 vs. NCBI nr
Match: gi|659093829|ref|XP_008447740.1| (PREDICTED: NEP1-interacting protein-like 2 isoform X2 [Cucumis melo])

HSP 1 Score: 144.1 bits (362), Expect = 1.6e-31
Identity = 83/101 (82.18%), Postives = 85/101 (84.16%), Query Frame = 1


Query: 19  MLVLEFKEQLFFHKPLRFLTEALKMITFALFLSLLALVGASVGTVIGAFKGHGTGIGAIA 78
           MLV+EFKEQLFF K LRFL EALK I  AL LSLLALVGA VGTVIGAFKGHG  IGAIA
Sbjct: 1   MLVVEFKEQLFFDKALRFLAEALKTIALALLLSLLALVGACVGTVIGAFKGHGAAIGAIA 60

Query: 79  GAAVALQIFSSSASGHR-YCLSREAIMERLMDGKGLMNWVS 119
           GAAVALQI S +ASG R YCLSREAIME LMDGKGLMNW S
Sbjct: 61  GAAVALQIVSCTASGQRYYCLSREAIMESLMDGKGLMNWAS 101

[Close]

BLAST of CSPI07G09760 vs. NCBI nr
Match: gi|659093827|ref|XP_008447739.1| (PREDICTED: NEP1-interacting protein-like 2 isoform X1 [Cucumis melo])

HSP 1 Score: 139.0 bits (349), Expect = 5.3e-30
Identity = 83/103 (80.58%), Postives = 85/103 (82.52%), Query Frame = 1


Query: 19  MLVLEFKEQLFFHKPLRFLTEALKMITFALFLSLLALVGASVGTVIGAFKGHGTGIGAIA 78
           MLV+EFKEQLFF K LRFL EALK I  AL LSLLALVGA VGTVIGAFKGHG  IGAIA
Sbjct: 1   MLVVEFKEQLFFDKALRFLAEALKTIALALLLSLLALVGACVGTVIGAFKGHGAAIGAIA 60

Query: 79  GAAVALQIFSSSASGHR-YCLSR--EAIMERLMDGKGLMNWVS 119
           GAAVALQI S +ASG R YCLSR  EAIME LMDGKGLMNW S
Sbjct: 61  GAAVALQIVSCTASGQRYYCLSRWQEAIMESLMDGKGLMNWAS 103

[Close]

BLAST of CSPI07G09760 vs. NCBI nr
Match: gi|641843804|gb|KDO62702.1| (hypothetical protein CISIN_1g024603mg [Citrus sinensis])

HSP 1 Score: 63.9 bits (154), Expect = 2.2e-07
Identity = 40/90 (44.44%), Postives = 53/90 (58.89%), Query Frame = 1


Query: 37  LTEALKMITFALFLSLLALVGASVGTVIGAFKG--------HGTGIGAIAGAAVALQIFS 96
           L  A+K + +A    + AL GA VGT+ GA KG        HG GIGA+AGA  ALQ+  
Sbjct: 36  LIRAMKRVLYAALTCIFALGGAIVGTIFGAMKGQTTETGFLHGAGIGAVAGAITALQLLE 95

Query: 97  SSASGHRYCLSREAIMERLMDGKGLMNWVS 119
           S+A G    LS+ A++  L++GK  M WVS
Sbjct: 96  SAADGE--SLSKAALLSSLVNGKVFMEWVS 123

The following BLAST results are available for this feature:

BLAST of CSPI07G09760 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CSPI07G09760 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K5D1_CUCSA	6.3e-54	99.15	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G209550 PE=4 SV=1	[more]
A0A067FHR5_CITSI	1.5e-07	44.44	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g024603mg PE=4 SV=1	[more]
A0A067FH05_CITSI	1.5e-07	44.44	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g024603mg PE=4 SV=1	[more]
A0A067F9B8_CITSI	1.5e-07	44.44	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g024603mg PE=4 SV=1	[more]
V4TYA4_9ROSI	1.5e-07	44.44	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10009352mg PE=4 SV=1	[more]

BLAST of CSPI07G09760 vs. TAIR10


Match Name	E-value	Identity	Description

BLAST of CSPI07G09760 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700188926\|gb\|KGN44159.1\|	9.0e-54	99.15	hypothetical protein Csa_7G209550 [Cucumis sativus]	[more]
gi\|778725640\|ref\|XP_011658973.1\|	2.3e-49	99.09	PREDICTED: NEP1-interacting protein-like 1 [Cucumis sativus]	[more]
gi\|659093829\|ref\|XP_008447740.1\|	1.6e-31	82.18	PREDICTED: NEP1-interacting protein-like 2 isoform X2 [Cucumis melo]	[more]
gi\|659093827\|ref\|XP_008447739.1\|	5.3e-30	80.58	PREDICTED: NEP1-interacting protein-like 2 isoform X1 [Cucumis melo]	[more]
gi\|641843804\|gb\|KDO62702.1\|	2.2e-07	44.44	hypothetical protein CISIN_1g024603mg [Citrus sinensis]	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0005515	protein binding
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI07G09760.1	CSPI07G09760.1	mRNA

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CSPI07G09760	Csa7G209550	Cucumber (Chinese Long) v2	cpicuB354
CSPI07G09760	CsaV3_7G021810	Cucumber (Chinese Long) v3	cpicucB414
CSPI07G09760	Cla97C09G173540	Watermelon (97103) v2	cpiwmbB588
CSPI07G09760	Bhi09G001376	Wax gourd	cpiwgoB705
CSPI07G09760	Cucsa.007210	Cucumber (Gy14) v1	cgycpiB128
CSPI07G09760	Cp4.1LG06g08890	Cucurbita pepo (Zucchini)	cpecpiB797
CSPI07G09760	CsGy7G009270	Cucumber (Gy14) v2	cgybcpiB331
CSPI07G09760	Carg12822	Silver-seed gourd	carcpiB0943

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CSPI07G09760	Cucurbita maxima (Rimu)	cmacpiB040
CSPI07G09760	Cucurbita maxima (Rimu)	cmacpiB503
CSPI07G09760	Cucurbita moschata (Rifu)	cmocpiB030
CSPI07G09760	Cucurbita moschata (Rifu)	cmocpiB494
CSPI07G09760	Melon (DHL92) v3.5.1	cpimeB542
CSPI07G09760	Watermelon (Charleston Gray)	cpiwcgB545
CSPI07G09760	Watermelon (97103) v1	cpiwmB573
CSPI07G09760	Cucurbita pepo (Zucchini)	cpecpiB587
CSPI07G09760	Bottle gourd (USVL1VR-Ls)	cpilsiB524
CSPI07G09760	Melon (DHL92) v3.6.1	cpimedB527