CSPI07G09630 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI07G09630
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionUnknown protein
LocationChr7 : 7610140 .. 7610553 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGAGTGAAACCAAGAAACCTGATTCCCCTAATCCTAACCTTAAGTGCTCACATGTATCAACTGAGGTCCACGAGCTGAGTCTATTGACTGCGAATGTGTGTCCCTTAGAGTTGGGAGACAACTGAAAATGGTTTCAGTGGCAATGCATTGACAATTACGAGTTAGTGAACAATTTTGGCCATGACAGTGGAATTGAACTCCGAGGTGATGATGAGAATATTGGTCTTCATATGGACTTGGAAGTAGAACTCGGAGGTGATTATAAGAATCTTGATCTTCGTGGTGTTGATATGTCTGAGGCAGATGCCCAAGTACATCATGAAGAATTGCCACTTGAGGAAGGTGCAGTGGAAAGTGATGACGAAAAAGTTCTTCCAATCAGTTGGCAAGAAAAAGTGAAAACATGTTGA

mRNA sequence

ATGGCGAGTGAAACCAAGAAACCTGATTCCCCTAATCCTAACCTTAAGTGCTCACATGTATCAACTGAGGTCCACGAGCTGAGTCTATTGACTGCGAATTGGCAATGCATTGACAATTACGAGTTAGTGAACAATTTTGGCCATGACAGTGGAATTGAACTCCGAGGTGATGATGAGAATATTGGTCTTCATATGGACTTGGAAGTAGAACTCGGAGGTGATTATAAGAATCTTGATCTTCGTGGTGTTGATATGTCTGAGGCAGATGCCCAAGTACATCATGAAGAATTGCCACTTGAGGAAGGTGCAGTGGAAAGTGATGACGAAAAAGTTCTTCCAATCAGTTGGCAAGAAAAAGTGAAAACATGTTGA

Coding sequence (CDS)

ATGGCGAGTGAAACCAAGAAACCTGATTCCCCTAATCCTAACCTTAAGTGCTCACATGTATCAACTGAGGTCCACGAGCTGAGTCTATTGACTGCGAATTGGCAATGCATTGACAATTACGAGTTAGTGAACAATTTTGGCCATGACAGTGGAATTGAACTCCGAGGTGATGATGAGAATATTGGTCTTCATATGGACTTGGAAGTAGAACTCGGAGGTGATTATAAGAATCTTGATCTTCGTGGTGTTGATATGTCTGAGGCAGATGCCCAAGTACATCATGAAGAATTGCCACTTGAGGAAGGTGCAGTGGAAAGTGATGACGAAAAAGTTCTTCCAATCAGTTGGCAAGAAAAAGTGAAAACATGTTGA
Homology
[Close]
BLAST of CSPI07G09630 vs. TrEMBL
Match: A0A0A0K393_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G206960 PE=4 SV=1)

HSP 1 Score: 229.2 bits (583), Expect = 2.8e-57
Identity = 112/119 (94.12%), Postives = 115/119 (96.64%), Query Frame = 1 

Query: 1   MASETKKPDSPNPNLKCSHVSTEVHELSLLTANWQCIDNYELVNNFGHDSGIELRGDDEN 60
           MASETKKP+SPNPNLKCSHVSTEVHELSLLTANWQCIDNYELVNNFGHDSGIE RGDDEN
Sbjct: 1   MASETKKPNSPNPNLKCSHVSTEVHELSLLTANWQCIDNYELVNNFGHDSGIEHRGDDEN 60

Query: 61  IGLHMDLEVELGGDYKNLDLRGVDMSEADAQVHHEELPLEEGAVESDDEKVLPISWQEK 120
           IGLHMDLEVELGGDYKNLDLRGVDMSEADAQVHHEELPLEEGAVESDDEKVLP   ++K
Sbjct: 61  IGLHMDLEVELGGDYKNLDLRGVDMSEADAQVHHEELPLEEGAVESDDEKVLPSVGKKK 119

[Close]
BLAST of CSPI07G09630 vs. NCBI nr
Match: gi|700188912|gb|KGN44145.1| (hypothetical protein Csa_7G206960 [Cucumis sativus])

HSP 1 Score: 229.2 bits (583), Expect = 4.0e-57
Identity = 112/119 (94.12%), Postives = 115/119 (96.64%), Query Frame = 1 

Query: 1   MASETKKPDSPNPNLKCSHVSTEVHELSLLTANWQCIDNYELVNNFGHDSGIELRGDDEN 60
           MASETKKP+SPNPNLKCSHVSTEVHELSLLTANWQCIDNYELVNNFGHDSGIE RGDDEN
Sbjct: 1   MASETKKPNSPNPNLKCSHVSTEVHELSLLTANWQCIDNYELVNNFGHDSGIEHRGDDEN 60

Query: 61  IGLHMDLEVELGGDYKNLDLRGVDMSEADAQVHHEELPLEEGAVESDDEKVLPISWQEK 120
           IGLHMDLEVELGGDYKNLDLRGVDMSEADAQVHHEELPLEEGAVESDDEKVLP   ++K
Sbjct: 61  IGLHMDLEVELGGDYKNLDLRGVDMSEADAQVHHEELPLEEGAVESDDEKVLPSVGKKK 119

The following BLAST results are available for this feature:
BLAST of CSPI07G09630 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CSPI07G09630 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K393_CUCSA2.8e-5794.12Uncharacterized protein OS=Cucumis sativus GN=Csa_7G206960 PE=4 SV=1[more]
BLAST of CSPI07G09630 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CSPI07G09630 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700188912|gb|KGN44145.1|4.0e-5794.12hypothetical protein Csa_7G206960 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI07G09630.1CSPI07G09630.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CSPI07G09630Csa7G206960Cucumber (Chinese Long) v2cpicuB354
CSPI07G09630CsaV3_7G021720Cucumber (Chinese Long) v3cpicucB414
CSPI07G09630CsGy7G009190Cucumber (Gy14) v2cgybcpiB331
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CSPI07G09630Watermelon (97103) v2cpiwmbB588
CSPI07G09630Wax gourdcpiwgoB705
CSPI07G09630Cucumber (Gy14) v1cgycpiB350
CSPI07G09630Cucurbita maxima (Rimu)cmacpiB497
CSPI07G09630Cucurbita moschata (Rifu)cmocpiB489
CSPI07G09630Melon (DHL92) v3.5.1cpimeB542
CSPI07G09630Watermelon (Charleston Gray)cpiwcgB545
CSPI07G09630Watermelon (97103) v1cpiwmB573
CSPI07G09630Bottle gourd (USVL1VR-Ls)cpilsiB524
CSPI07G09630Melon (DHL92) v3.6.1cpimedB527