CSPI07G09500 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI07G09500
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionUnknown protein
LocationChr7 : 7502678 .. 7502985 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATGCGGGGAATGAGCCTCTCGCACCGTCCTCCTACTCCTCGTTAGTTCTTAATGTGACTACGACGACTCTCACGGCTGGCTCATGCATGTTTGTAACTCTTCGCTAGTTCACTTGGCCTCTGATCATAGCAACCTCCAATCCTCCTCCACTTCATCTTCATCAACATCTTCATCTCTATTTCCGACGACGATTTTGATCAAACCCACCGACCCTGTGGGGAAAGGTTACCACTACAAGATGAATTTCAGCAACAAACAAAGGCAGATGAGTGACATGCCATATCGCCATATCCACTCCATTTAA

mRNA sequence

ATGGATGCGGGGAATGAGCCTCTCGCACCGTCCTCCTACTCCTCGTTAGTTCTTAATGTGACTACGACGACTCTCACGGCTGGCTCATGCATCAACCTCCAATCCTCCTCCACTTCATCTTCATCAACATCTTCATCTCTATTTCCGACGACGATTTTGATCAAACCCACCGACCCTGTGGGGAAAGGTTACCACTACAAGATGAATTTCAGCAACAAACAAAGGCAGATGAGTGACATGCCATATCGCCATATCCACTCCATTTAA

Coding sequence (CDS)

ATGGATGCGGGGAATGAGCCTCTCGCACCGTCCTCCTACTCCTCGTTAGTTCTTAATGTGACTACGACGACTCTCACGGCTGGCTCATGCATCAACCTCCAATCCTCCTCCACTTCATCTTCATCAACATCTTCATCTCTATTTCCGACGACGATTTTGATCAAACCCACCGACCCTGTGGGGAAAGGTTACCACTACAAGATGAATTTCAGCAACAAACAAAGGCAGATGAGTGACATGCCATATCGCCATATCCACTCCATTTAA
Homology
[Close]
BLAST of CSPI07G09500 vs. TrEMBL
Match: A0A0A0K748_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G201840 PE=4 SV=1)

HSP 1 Score: 169.9 bits (429), Expect = 1.4e-39
Identity = 88/88 (100.00%), Postives = 88/88 (100.00%), Query Frame = 1 

Query: 1  MDAGNEPLAPSSYSSLVLNVTTTTLTAGSCINLQSSSTSSSSTSSSLFPTTILIKPTDPV 60
          MDAGNEPLAPSSYSSLVLNVTTTTLTAGSCINLQSSSTSSSSTSSSLFPTTILIKPTDPV
Sbjct: 1  MDAGNEPLAPSSYSSLVLNVTTTTLTAGSCINLQSSSTSSSSTSSSLFPTTILIKPTDPV 60

Query: 61 GKGYHYKMNFSNKQRQMSDMPYRHIHSI 89
          GKGYHYKMNFSNKQRQMSDMPYRHIHSI
Sbjct: 61 GKGYHYKMNFSNKQRQMSDMPYRHIHSI 88

[Close]
BLAST of CSPI07G09500 vs. NCBI nr
Match: gi|700188899|gb|KGN44132.1| (hypothetical protein Csa_7G201840 [Cucumis sativus])

HSP 1 Score: 169.9 bits (429), Expect = 2.1e-39
Identity = 88/88 (100.00%), Postives = 88/88 (100.00%), Query Frame = 1 

Query: 1  MDAGNEPLAPSSYSSLVLNVTTTTLTAGSCINLQSSSTSSSSTSSSLFPTTILIKPTDPV 60
          MDAGNEPLAPSSYSSLVLNVTTTTLTAGSCINLQSSSTSSSSTSSSLFPTTILIKPTDPV
Sbjct: 1  MDAGNEPLAPSSYSSLVLNVTTTTLTAGSCINLQSSSTSSSSTSSSLFPTTILIKPTDPV 60

Query: 61 GKGYHYKMNFSNKQRQMSDMPYRHIHSI 89
          GKGYHYKMNFSNKQRQMSDMPYRHIHSI
Sbjct: 61 GKGYHYKMNFSNKQRQMSDMPYRHIHSI 88

The following BLAST results are available for this feature:
BLAST of CSPI07G09500 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CSPI07G09500 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K748_CUCSA1.4e-39100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_7G201840 PE=4 SV=1[more]
BLAST of CSPI07G09500 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CSPI07G09500 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700188899|gb|KGN44132.1|2.1e-39100.00hypothetical protein Csa_7G201840 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI07G09500.1CSPI07G09500.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CSPI07G09500Csa7G201840Cucumber (Chinese Long) v2cpicuB354
CSPI07G09500CsaV3_7G021600Cucumber (Chinese Long) v3cpicucB414
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CSPI07G09500Melon (DHL92) v3.5.1cpimeB542
CSPI07G09500Melon (DHL92) v3.6.1cpimedB527
CSPI07G09500Cucumber (Gy14) v2cgybcpiB331
CSPI07G09500Cucumber (Gy14) v1cgycpiB350
CSPI07G09500Cucurbita maxima (Rimu)cmacpiB497