CSPI07G06620 (gene) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI07G06620
Type	gene
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	Pathogenesis-related protein 1
Location	Chr7 : 4829746 .. 4830258 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCACTCGCCACCACTCTCTCTGCCCTTTGCATCGTTGCACTAGCCCTAACCCCAATCGTCATTGCTCAAAACAGCCCTCAAGACTTCTTTGACGCGCACAATGCAGTGCGAGCCAAGGTCGGGGCTGAACCCCTCTTTTGGGACGAAGAACTTGAAGCTTACGCTAAAAATTATATCACGTCGAAGATTAAAACTTGTGAAATGGTGCACTTTGTTGGCCCTTATGGTGAGAACTTGGCAACAGCGAACCCCGTGTTAACCGCAGCAGCTGCAGTGAACACATGGGCAGCCGAGAAGAAGTACTATAACCATAACTCGAACAAATGTGAGGGAGGCGAGTGCCGACATTATAGACAGTTGGTGTGGAAGAATAGTTTTTTGGTGGGTTGTGCTACTGTTAAATGCAAGAACAATTGGTCTTTAGTCTCATGCAACTATAGTCCTTCTGGGAATGTTGTAGGTGAGCGATTATTCATTTCATTTACTTATAATATGAAAGGAAGATTATAA

mRNA sequence

ATGGCACTCGCCACCACTCTCTCTGCCCTTTGCATCGTTGCACTAGCCCTAACCCCAATCGTCATTGCTCAAAACAGCCCTCAAGACTTCTTTGACGCGCACAATGCAGTGCGAGCCAAGGTCGGGGCTGAACCCCTCTTTTGGGACGAAGAACTTGAAGCTTACGCTAAAAATTATATCACGTCGAAGATTAAAACTTGTGAAATGGTGCACTTTGTTGGCCCTTATGGTGAGAACTTGGCAACAGCGAACCCCGTGTTAACCGCAGCAGCTGCAGTGAACACATGGGCAGCCGAGAAGAAGTACTATAACCATAACTCGAACAAATGTGAGGGAGGCGAGTGCCGACATTATAGACAGTTGGTGTGGAAGAATAGTTTTTTGGTGGGTTGTGCTACTGTTAAATGCAAGAACAATTGGTCTTTAGTCTCATGCAACTATAGTCCTTCTGGGAATGTTGTAGGTGAGCGATTATTCATTTCATTTACTTATAATATGAAAGGAAGATTATAA

Coding sequence (CDS)

ATGGCACTCGCCACCACTCTCTCTGCCCTTTGCATCGTTGCACTAGCCCTAACCCCAATCGTCATTGCTCAAAACAGCCCTCAAGACTTCTTTGACGCGCACAATGCAGTGCGAGCCAAGGTCGGGGCTGAACCCCTCTTTTGGGACGAAGAACTTGAAGCTTACGCTAAAAATTATATCACGTCGAAGATTAAAACTTGTGAAATGGTGCACTTTGTTGGCCCTTATGGTGAGAACTTGGCAACAGCGAACCCCGTGTTAACCGCAGCAGCTGCAGTGAACACATGGGCAGCCGAGAAGAAGTACTATAACCATAACTCGAACAAATGTGAGGGAGGCGAGTGCCGACATTATAGACAGTTGGTGTGGAAGAATAGTTTTTTGGTGGGTTGTGCTACTGTTAAATGCAAGAACAATTGGTCTTTAGTCTCATGCAACTATAGTCCTTCTGGGAATGTTGTAGGTGAGCGATTATTCATTTCATTTACTTATAATATGAAAGGAAGATTATAA

Homology

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BLAST of CSPI07G06620 vs. Swiss-Prot
Match: PRB1_TOBAC (Basic form of pathogenesis-related protein 1 OS=Nicotiana tabacum PE=3 SV=1)

HSP 1 Score: 173.3 bits (438), Expect = 2.2e-42
Identity = 80/159 (50.31%), Postives = 100/159 (62.89%), Query Frame = 1


Query: 1   MALATTLSALCIVALALTPIVIAQNSPQDFFDAHNAVRAKVGAEPLFWDEELEAYAKNYI 60
           M   TT+ A  I    L     AQNSPQD+ + HNA R +VG  P+ WD  L AYA+NY 
Sbjct: 1   MGFLTTIVACFITFAILIHSSKAQNSPQDYLNPHNAARRQVGVGPMTWDNRLAAYAQNYA 60

Query: 61  TSKIKTCEMVHFVGPYGENLATANPVLTAAAAVNTWAAEKKYYNHNSNKCEGGECRHYRQ 120
             +I  C M+H  GPYGENLA A P L AA AV  W  EK++Y++NSN C GG C HY Q
Sbjct: 61  NQRIGDCGMIHSHGPYGENLAAAFPQLNAAGAVKMWVDEKRFYDYNSNSCVGGVCGHYTQ 120

Query: 121 LVWKNSFLVGCATVKCKNNWSLVSCNYSPSGNVVGERLF 160
           +VW+NS  +GCA V+  N W  ++CNY P GN +G+R F
Sbjct: 121 VVWRNSVRLGCARVRSNNGWFFITCNYDPPGNFIGQRPF 159

[Close]

BLAST of CSPI07G06620 vs. Swiss-Prot
Match: PR1B_TOBAC (Pathogenesis-related protein 1B OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 162.5 bits (410), Expect = 4.0e-39
Identity = 75/136 (55.15%), Postives = 92/136 (67.65%), Query Frame = 1


Query: 23  AQNSPQDFFDAHNAVRAKVGAEPLFWDEELEAYAKNYITSKIKTCEMVHFVGPYGENLAT 82
           AQNS QD+ DAHN  RA VG EPL WD  + AYA+NY++     C +VH  G YGENLA 
Sbjct: 30  AQNSQQDYLDAHNTARADVGVEPLTWDNGVAAYAQNYVSQLAADCNLVHSHGQYGENLAQ 89

Query: 83  -ANPVLTAAAAVNTWAAEKKYYNHNSNKCEGGE-CRHYRQLVWKNSFLVGCATVKCKNNW 142
            +   +TAA AV  W  EK+YY+H+SN C  G+ C HY Q+VW+NS  VGCA VKC N  
Sbjct: 90  GSGDFMTAAKAVEMWVDEKQYYDHDSNTCAQGQVCGHYTQVVWRNSVRVGCARVKCNNGG 149

Query: 143 SLVSCNYSPSGNVVGE 157
            +VSCNY P GNV+G+
Sbjct: 150 YVVSCNYDPPGNVIGQ 165

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BLAST of CSPI07G06620 vs. Swiss-Prot
Match: PR1C_TOBAC (Pathogenesis-related protein 1C OS=Nicotiana tabacum PE=2 SV=3)

HSP 1 Score: 158.3 bits (399), Expect = 7.5e-38
Identity = 80/161 (49.69%), Postives = 104/161 (64.60%), Query Frame = 1


Query: 3   LATTLSALCIVALALTPIVI-----AQNSPQDFFDAHNAVRAKVGAEPLFWDEELEAYAK 62
           L + +S+  +V+  L  ++I     AQNS QD+ DAHN  RA VG EPL WD+++ AYA+
Sbjct: 5   LFSQMSSFFLVSTLLLFLIISHSCHAQNSQQDYLDAHNTARADVGVEPLTWDDQVAAYAQ 64

Query: 63  NYITSKIKTCEMVHFVGPYGENLA-TANPVLTAAAAVNTWAAEKKYYNHNSNKCEGGE-C 122
           NY +     C +VH  G YGENLA  +   LTAA AV  W  EK+YY H+SN C  G+ C
Sbjct: 65  NYASQLAADCNLVHSHGQYGENLAWGSGDFLTAAKAVEMWVNEKQYYAHDSNTCAQGQVC 124

Query: 123 RHYRQLVWKNSFLVGCATVKCKNNWSLVSCNYSPSGNVVGE 157
            HY Q+VW+NS  VGCA V+C N   +VSCNY P GNV+G+
Sbjct: 125 GHYTQVVWRNSVRVGCARVQCNNGGYIVSCNYDPPGNVIGK 165

[Close]

BLAST of CSPI07G06620 vs. Swiss-Prot
Match: PR1A_TOBAC (Pathogenesis-related protein 1A OS=Nicotiana tabacum PE=1 SV=1)

HSP 1 Score: 155.6 bits (392), Expect = 4.8e-37
Identity = 80/161 (49.69%), Postives = 102/161 (63.35%), Query Frame = 1


Query: 3   LATTLSALCIVALALTPIVI-----AQNSPQDFFDAHNAVRAKVGAEPLFWDEELEAYAK 62
           L + L +  +V+  L  +VI     AQNS QD+ DAHN  RA VG EPL WD+++ AYA+
Sbjct: 5   LFSQLPSFLLVSTLLLFLVISHSCRAQNSQQDYLDAHNTARADVGVEPLTWDDQVAAYAQ 64

Query: 63  NYITSKIKTCEMVHFVGPYGENLAT-ANPVLTAAAAVNTWAAEKKYYNHNSNKCEGGE-C 122
           NY +     C +VH  G YGENLA  +   +TAA AV  W  EK+YY+H+SN C  G+ C
Sbjct: 65  NYASQLAADCNLVHSHGQYGENLAEGSGDFMTAAKAVEMWVDEKQYYDHDSNTCAQGQVC 124

Query: 123 RHYRQLVWKNSFLVGCATVKCKNNWSLVSCNYSPSGNVVGE 157
            HY Q+VW+NS  VGCA V+C N   +VSCNY P GN  GE
Sbjct: 125 GHYTQVVWRNSVRVGCARVQCNNGGYVVSCNYDPPGNYRGE 165

[Close]

BLAST of CSPI07G06620 vs. Swiss-Prot
Match: PR1_SAMNI (Pathogenesis-related protein PR-1 type OS=Sambucus nigra PE=2 SV=1)

HSP 1 Score: 150.6 bits (379), Expect = 1.6e-35
Identity = 72/155 (46.45%), Postives = 99/155 (63.87%), Query Frame = 1


Query: 6   TLSALCIVALALTPIVIAQNSPQDFFDAHNAVRAKVGAEPLFWDEELEAYAKNYITSKIK 65
           +++ +C+VAL +    +AQNSPQD+ DAHNA R+ V   P+ WDE + A+A+ Y  S+  
Sbjct: 11  SVALVCVVALVMVQYSVAQNSPQDYVDAHNAARSAVNVGPVTWDESVAAFARQYAQSRAG 70

Query: 66  TCEMVHFVGP-YGENLATANPV-LTAAAAVNTWAAEKKYYNHNSNKCEGGE-CRHYRQLV 125
            C +VH   P YGENLA  +   LT   AV+ W AE+  YN N+N C  G+ C HY Q+V
Sbjct: 71  DCRLVHSGDPRYGENLAFGSGFELTGRNAVDMWVAERNDYNPNTNTCAPGKVCGHYTQVV 130

Query: 126 WKNSFLVGCATVKCKNNWSLVSCNYSPSGNVVGER 158
           W+NS  +GCA V+C N    ++CNYSP GN  G+R
Sbjct: 131 WRNSVRIGCARVRCNNGAWFITCNYSPPGNYAGQR 165

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BLAST of CSPI07G06620 vs. TrEMBL
Match: A0A0A0K4C6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G070250 PE=3 SV=1)

HSP 1 Score: 245.0 bits (624), Expect = 6.8e-62
Identity = 112/157 (71.34%), Postives = 134/157 (85.35%), Query Frame = 1


Query: 1   MALATTLSALCIVALALT-PIVIAQNSPQDFFDAHNAVRAKVGAEPLFWDEELEAYAKNY 60
           MAL+   S++C++ L LT P+++A N+PQ++ DAHNAVRA+VGA+P+FWDEEL  YA+NY
Sbjct: 4   MALSNFPSSICLIMLTLTIPMIVAHNTPQNYVDAHNAVRAEVGADPVFWDEELAKYAQNY 63

Query: 61  ITSKIKTCEMVHFVGPYGENLATANPVLTAAAAVNTWAAEKKYYNHNSNKCEGGECRHYR 120
           + SKI TCEMVH  G YGENLAT + +LTAAAAV  WA EKKYY+HNSNKC GGECRHY 
Sbjct: 64  LDSKISTCEMVHSNGSYGENLATLDGLLTAAAAVKAWADEKKYYDHNSNKCVGGECRHYT 123

Query: 121 QLVWKNSFLVGCATVKCKNNWSLVSCNYSPSGNVVGE 157
           QLVWKNSFL+GCA +KCKNNWSLVSCNYSP+GNVVGE
Sbjct: 124 QLVWKNSFLIGCANIKCKNNWSLVSCNYSPAGNVVGE 160

[Close]

BLAST of CSPI07G06620 vs. TrEMBL
Match: E2GEV3_9ROSI (Pathogenesis-related protein 1 OS=Vitis hybrid cultivar GN=PR-1 PE=3 SV=1)

HSP 1 Score: 180.3 bits (456), Expect = 2.0e-42
Identity = 79/146 (54.11%), Postives = 99/146 (67.81%), Query Frame = 1


Query: 12  IVALALTPIVIAQNSPQDFFDAHNAVRAKVGAEPLFWDEELEAYAKNYITSKIKTCEMVH 71
           ++ LAL     AQNSPQD+ DAHNA RA+VG   + W++ + AYA+NY   +I  C +VH
Sbjct: 14  LLGLALAHTCCAQNSPQDYVDAHNAARAQVGVGSITWNDTVAAYAQNYANQRISDCNLVH 73

Query: 72  FVGPYGENLATANPVLTAAAAVNTWAAEKKYYNHNSNKCEGGECRHYRQLVWKNSFLVGC 131
             GPYGENLA  +  LT   AVN W  EK YY++NSN C GGEC HY Q+VW+NS  +GC
Sbjct: 74  SGGPYGENLAKGSGSLTGTDAVNLWVGEKSYYDYNSNSCVGGECGHYTQVVWRNSVRLGC 133

Query: 132 ATVKCKNNWSLVSCNYSPSGNVVGER 158
           A V+C N W  V+CNY P GN VG+R
Sbjct: 134 ARVQCNNGWWFVTCNYDPPGNYVGQR 159

[Close]

BLAST of CSPI07G06620 vs. TrEMBL
Match: F6HBN9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_03s0088g00690 PE=3 SV=1)

HSP 1 Score: 179.9 bits (455), Expect = 2.7e-42
Identity = 79/146 (54.11%), Postives = 99/146 (67.81%), Query Frame = 1


Query: 12  IVALALTPIVIAQNSPQDFFDAHNAVRAKVGAEPLFWDEELEAYAKNYITSKIKTCEMVH 71
           ++ LAL     AQNSPQD+ DAHNA RA+VG   + W++ + AYA+NY   +I  C +VH
Sbjct: 34  LMGLALAHTCCAQNSPQDYVDAHNAARAQVGVGSITWNDTVAAYAQNYANQRISDCNLVH 93

Query: 72  FVGPYGENLATANPVLTAAAAVNTWAAEKKYYNHNSNKCEGGECRHYRQLVWKNSFLVGC 131
             GPYGENLA  +  LT   AVN W  EK YY++NSN C GGEC HY Q+VW+NS  +GC
Sbjct: 94  SGGPYGENLAKGSGSLTGTDAVNLWVGEKPYYDYNSNSCVGGECGHYTQVVWRNSVRLGC 153

Query: 132 ATVKCKNNWSLVSCNYSPSGNVVGER 158
           A V+C N W  V+CNY P GN VG+R
Sbjct: 154 ARVQCNNGWWFVTCNYDPPGNYVGQR 179

[Close]

BLAST of CSPI07G06620 vs. TrEMBL
Match: A5BC26_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_042545 PE=3 SV=1)

HSP 1 Score: 179.9 bits (455), Expect = 2.7e-42
Identity = 79/146 (54.11%), Postives = 99/146 (67.81%), Query Frame = 1


Query: 12  IVALALTPIVIAQNSPQDFFDAHNAVRAKVGAEPLFWDEELEAYAKNYITSKIKTCEMVH 71
           ++ LAL     AQNSPQD+ DAHNA RA+VG   + W++ + AYA+NY   +I  C +VH
Sbjct: 14  LMGLALAHTCCAQNSPQDYVDAHNAARAQVGVGSITWNDTVAAYAQNYANQRISDCNLVH 73

Query: 72  FVGPYGENLATANPVLTAAAAVNTWAAEKKYYNHNSNKCEGGECRHYRQLVWKNSFLVGC 131
             GPYGENLA  +  LT   AVN W  EK YY++NSN C GGEC HY Q+VW+NS  +GC
Sbjct: 74  SGGPYGENLAKGSGSLTGTDAVNLWVGEKPYYDYNSNSCVGGECGHYTQVVWRNSVRLGC 133

Query: 132 ATVKCKNNWSLVSCNYSPSGNVVGER 158
           A V+C N W  V+CNY P GN VG+R
Sbjct: 134 ARVQCNNGWWFVTCNYDPPGNYVGQR 159

[Close]

BLAST of CSPI07G06620 vs. TrEMBL
Match: A0A0A0K4C1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G070225 PE=3 SV=1)

HSP 1 Score: 179.5 bits (454), Expect = 3.5e-42
Identity = 82/140 (58.57%), Postives = 96/140 (68.57%), Query Frame = 1


Query: 17  LTPIVIAQNSPQDFFDAHNAVRAKVGAEPLFWDEELEAYAKNYITSKIKTCEMVHFVGPY 76
           L  I +AQNS QDF +AHNA RAKVG  P+ W+  L AYA+ Y   KI TCEM H  GPY
Sbjct: 20  LASITLAQNSHQDFVNAHNAARAKVGVGPVSWNYTLAAYAQTYANKKIGTCEMQHSYGPY 79

Query: 77  GENLATANPVLTAAAAVNTWAAEKKYYNHNSNKCEGGECRHYRQLVWKNSFLVGCATVKC 136
           GENLA     +TA  AVN W +EKKYY+H+SN+C G ECRHY Q+VW+ +  VGCA VKC
Sbjct: 80  GENLAEGYGEMTAVEAVNFWVSEKKYYDHHSNRCIGDECRHYTQVVWRGTKHVGCARVKC 139

Query: 137 KNNWSLVSCNYSPSGNVVGE 157
            NNW  V CNY P  N VG+
Sbjct: 140 HNNWIFVICNYDPPDNYVGQ 159

[Close]

BLAST of CSPI07G06620 vs. TAIR10
Match: AT2G14580.1 (AT2G14580.1 basic pathogenesis-related protein 1)

HSP 1 Score: 148.3 bits (373), Expect = 4.4e-36
Identity = 70/157 (44.59%), Postives = 98/157 (62.42%), Query Frame = 1


Query: 5   TTLSALCIVALALTPIVI----AQNSPQDFFDAHNAVRAKVGAEPLFWDEELEAYAKNYI 64
           T+ S + I+  AL   ++    AQ+S QD+ +AHN  R+++G  P+ WDE L AYA+NY 
Sbjct: 4   TSYSRILIILAALVGALVVPLKAQDSQQDYVNAHNQARSQIGVGPMQWDEGLAAYARNYA 63

Query: 65  TSKIKTCEMVHFVGPYGENLATANPVLTAAAAVNTWAAEKKYYNHNSNKCEGGECRHYRQ 124
                 C +VH  GPYGENLA +   L+  AAVN W  EK  YN+++N C  G C HY Q
Sbjct: 64  NQLKGDCRLVHSRGPYGENLAKSGGDLSGVAAVNLWVNEKANYNYDTNTC-NGVCGHYTQ 123

Query: 125 LVWKNSFLVGCATVKCKNNWSLVSCNYSPSGNVVGER 158
           +VW+NS  +GCA V+C N  +++SCNY P GN   ++
Sbjct: 124 VVWRNSVRLGCAKVRCNNGGTIISCNYDPPGNYANQK 159

[Close]

BLAST of CSPI07G06620 vs. TAIR10
Match: AT3G19690.1 (AT3G19690.1 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein)

HSP 1 Score: 146.7 bits (369), Expect = 1.3e-35
Identity = 69/162 (42.59%), Postives = 104/162 (64.20%), Query Frame = 1


Query: 1   MALATTLSALCIVALALTPIVIAQNSPQDFFDAHNAVRAKVGAEPLFWDEELEAYAKNYI 60
           M+L  T + L ++A+AL    +A++  Q F +AHN  R +VG +PL WD+E+ AYA +Y 
Sbjct: 1   MSLLKT-NILFLLAIALFYGSLAEDLQQQFLEAHNEARNEVGLDPLVWDDEVAAYAASYA 60

Query: 61  TSKIKTCEMVHFVGPYGENLATANPVLTAAAAVNTWAAEKKYYNHNSNKC---EGGECRH 120
             +I  C +VH  GP+GEN+A ++  ++A  A   W  EK+YY+++SN C    GG C H
Sbjct: 61  NQRINDCALVHSNGPFGENIAMSSGEMSAEDAAEMWINEKQYYDYDSNTCNDPNGGTCLH 120

Query: 121 YRQLVWKNSFLVGCATVKCKNNWSLVSCNYSPSGNVVGERLF 160
           Y Q+VWKN+  +GCA V C +  + ++CNY P GN +GE+ F
Sbjct: 121 YTQVVWKNTVRLGCAKVVCNSGGTFITCNYDPPGNYIGEKPF 161

[Close]

BLAST of CSPI07G06620 vs. TAIR10
Match: AT1G50060.1 (AT1G50060.1 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein)

HSP 1 Score: 145.6 bits (366), Expect = 2.8e-35
Identity = 71/150 (47.33%), Postives = 95/150 (63.33%), Query Frame = 1


Query: 10  LCIVALALTPIVI-AQNSPQDFFDAHNAVRAKVGAEPLFWDEELEAYAKNYITSKIKTCE 69
           L IVA++   +   AQN+PQD+ ++HN  RA+VG   + WD  L AYA NY   +   C 
Sbjct: 9   LVIVAISFLVVATNAQNTPQDYLNSHNTARAQVGVPNVVWDTTLAAYALNYSNFRKADCN 68

Query: 70  MVHFVGPYGENLAT-ANPVLTAAAAVNTWAAEKKYYNHNSNKCEGG-ECRHYRQLVWKNS 129
           +VH  GPYGENLA  ++   +A +AV  W  EK YY++  N C GG +C HY Q+VW++S
Sbjct: 69  LVHSNGPYGENLAKGSSSSFSAISAVKLWVDEKPYYSYAYNNCTGGKQCLHYTQVVWRDS 128

Query: 130 FLVGCATVKCKNNWSLVSCNYSPSGNVVGE 157
             +GCA V+C N W  VSCNY+  GN VGE
Sbjct: 129 VKIGCARVQCTNTWWFVSCNYNSPGNWVGE 158

[Close]

BLAST of CSPI07G06620 vs. TAIR10
Match: AT2G14610.1 (AT2G14610.1 pathogenesis-related gene 1)

HSP 1 Score: 143.3 bits (360), Expect = 1.4e-34
Identity = 69/157 (43.95%), Postives = 94/157 (59.87%), Query Frame = 1


Query: 5   TTLSALCIVALALTPIVI----AQNSPQDFFDAHNAVRAKVGAEPLFWDEELEAYAKNYI 64
           T  S   IV +AL   ++    AQ+SPQD+   HN  R  VG  P+ WDE + AYA++Y 
Sbjct: 4   TGYSRFLIVFVALVGALVLPSKAQDSPQDYLRVHNQARGAVGVGPMQWDERVAAYARSYA 63

Query: 65  TSKIKTCEMVHFVGPYGENLATANPVLTAAAAVNTWAAEKKYYNHNSNKCEGGECRHYRQ 124
                 C ++H  GPYGENLA  +  L+  +AVN W +EK  YN+ +N C  G C HY Q
Sbjct: 64  EQLRGNCRLIHSGGPYGENLAWGSGDLSGVSAVNMWVSEKANYNYAANTC-NGVCGHYTQ 123

Query: 125 LVWKNSFLVGCATVKCKNNWSLVSCNYSPSGNVVGER 158
           +VW+ S  +GCA V+C N  +++SCNY P GN V E+
Sbjct: 124 VVWRKSVRLGCAKVRCNNGGTIISCNYDPRGNYVNEK 159

[Close]

BLAST of CSPI07G06620 vs. TAIR10
Match: AT4G33720.1 (AT4G33720.1 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein)

HSP 1 Score: 140.6 bits (353), Expect = 9.1e-34
Identity = 71/155 (45.81%), Postives = 95/155 (61.29%), Query Frame = 1


Query: 3   LATTLSALCIVALALTPIVIAQNSPQDFFDAHNAVRAKVGAEPLFWDEELEAYAKNYITS 62
           LA T   + IV L       AQ+SPQDF   HN  RA+VG  PL WDE++ AYA+NY   
Sbjct: 12  LAITFFLVLIVHLK------AQDSPQDFLAVHNRARAEVGVGPLRWDEKVAAYARNYANQ 71

Query: 63  KIKTCEMVHFVGPYGENLATANPVLTAAAAVNTWAAEKKYYNHNSNKCE-GGECRHYRQL 122
           +   C M H  G YGEN+A ++  +T  AAV+ W  E+  Y+++SN C    +C HY Q+
Sbjct: 72  RKGDCAMKHSSGSYGENIAWSSGSMTGVAAVDMWVDEQFDYDYDSNTCAWDKQCGHYTQV 131

Query: 123 VWKNSFLVGCATVKCKNNWSLVSCNYSPSGNVVGE 157
           VW+NS  +GCA V+C N  + ++CNY P GN VGE
Sbjct: 132 VWRNSERLGCAKVRCNNGQTFITCNYDPPGNWVGE 160

[Close]

BLAST of CSPI07G06620 vs. NCBI nr
Match: gi|449438610|ref|XP_004137081.1| (PREDICTED: basic form of pathogenesis-related protein 1-like [Cucumis sativus])

HSP 1 Score: 325.9 bits (834), Expect = 4.3e-86
Identity = 156/157 (99.36%), Postives = 157/157 (100.00%), Query Frame = 1


Query: 1   MALATTLSALCIVALALTPIVIAQNSPQDFFDAHNAVRAKVGAEPLFWDEELEAYAKNYI 60
           MALATTLSALCIVALALTPIVIAQNSPQDFFDAHNAVRAKVGAEPLFWDEELEAYAKNYI
Sbjct: 1   MALATTLSALCIVALALTPIVIAQNSPQDFFDAHNAVRAKVGAEPLFWDEELEAYAKNYI 60

Query: 61  TSKIKTCEMVHFVGPYGENLATANPVLTAAAAVNTWAAEKKYYNHNSNKCEGGECRHYRQ 120
           TSKIKTCEMVHFVGPYGENLATANPVLTAAA+VNTWAAEKKYYNHNSNKCEGGECRHYRQ
Sbjct: 61  TSKIKTCEMVHFVGPYGENLATANPVLTAAASVNTWAAEKKYYNHNSNKCEGGECRHYRQ 120

Query: 121 LVWKNSFLVGCATVKCKNNWSLVSCNYSPSGNVVGER 158
           LVWKNSFLVGCATVKCKNNWSLVSCNYSPSGNVVGER
Sbjct: 121 LVWKNSFLVGCATVKCKNNWSLVSCNYSPSGNVVGER 157

[Close]

BLAST of CSPI07G06620 vs. NCBI nr
Match: gi|778724761|ref|XP_004137082.2| (PREDICTED: basic form of pathogenesis-related protein 1-like [Cucumis sativus])

HSP 1 Score: 245.0 bits (624), Expect = 9.7e-62
Identity = 112/157 (71.34%), Postives = 134/157 (85.35%), Query Frame = 1


Query: 1   MALATTLSALCIVALALT-PIVIAQNSPQDFFDAHNAVRAKVGAEPLFWDEELEAYAKNY 60
           MAL+   S++C++ L LT P+++A N+PQ++ DAHNAVRA+VGA+P+FWDEEL  YA+NY
Sbjct: 4   MALSNFPSSICLIMLTLTIPMIVAHNTPQNYVDAHNAVRAEVGADPVFWDEELAKYAQNY 63

Query: 61  ITSKIKTCEMVHFVGPYGENLATANPVLTAAAAVNTWAAEKKYYNHNSNKCEGGECRHYR 120
           + SKI TCEMVH  G YGENLAT + +LTAAAAV  WA EKKYY+HNSNKC GGECRHY 
Sbjct: 64  LDSKISTCEMVHSNGSYGENLATLDGLLTAAAAVKAWADEKKYYDHNSNKCVGGECRHYT 123

Query: 121 QLVWKNSFLVGCATVKCKNNWSLVSCNYSPSGNVVGE 157
           QLVWKNSFL+GCA +KCKNNWSLVSCNYSP+GNVVGE
Sbjct: 124 QLVWKNSFLIGCANIKCKNNWSLVSCNYSPAGNVVGE 160

[Close]

BLAST of CSPI07G06620 vs. NCBI nr
Match: gi|659110135|ref|XP_008455067.1| (PREDICTED: pathogenesis-related protein 1A-like [Cucumis melo])

HSP 1 Score: 245.0 bits (624), Expect = 9.7e-62
Identity = 108/156 (69.23%), Postives = 131/156 (83.97%), Query Frame = 1


Query: 1   MALATTLSALCIVALALTPIVIAQNSPQDFFDAHNAVRAKVGAEPLFWDEELEAYAKNYI 60
           MAL+   S++C++ L L P+++A N+PQ++ DAHNAVRA+VG +P+FWDEEL  YA+NY+
Sbjct: 29  MALSNIPSSICLIMLTLIPMIVAHNTPQNYVDAHNAVRAEVGVDPVFWDEELAKYAQNYL 88

Query: 61  TSKIKTCEMVHFVGPYGENLATANPVLTAAAAVNTWAAEKKYYNHNSNKCEGGECRHYRQ 120
            SK+ TCEMVH  GPYGENLAT + +LTAAAAV  WA EKKYY+HNSN C GGECRHY Q
Sbjct: 89  ESKVSTCEMVHSNGPYGENLATLDGLLTAAAAVQAWADEKKYYDHNSNTCVGGECRHYTQ 148

Query: 121 LVWKNSFLVGCATVKCKNNWSLVSCNYSPSGNVVGE 157
           LVWKNSFL+GCA +KCKNNWSLVSCNYSP+GNV GE
Sbjct: 149 LVWKNSFLIGCANIKCKNNWSLVSCNYSPAGNVAGE 184

[Close]

BLAST of CSPI07G06620 vs. NCBI nr
Match: gi|659110137|ref|XP_008455068.1| (PREDICTED: basic form of pathogenesis-related protein 1-like [Cucumis melo])

HSP 1 Score: 183.0 bits (463), Expect = 4.5e-43
Identity = 83/151 (54.97%), Postives = 104/151 (68.87%), Query Frame = 1


Query: 7   LSALCIVALAL-TPIVIAQNSPQDFFDAHNAVRAKVGAEPLFWDEELEAYAKNYITSKIK 66
           LS +C+V+  L T I  AQNSPQDF D HN +RA VG  P+ WD+ L AYA++Y  SKI 
Sbjct: 9   LSTICLVSFLLATTISNAQNSPQDFVDTHNDIRAAVGVGPVSWDDTLAAYAQSYADSKID 68

Query: 67  TCEMVHFVGPYGENLATANPVLTAAAAVNTWAAEKKYYNHNSNKCEGGECRHYRQLVWKN 126
           TCEM H  GPYGENLA     +T   AV  WA EKK+YNH+ N+C G EC HY Q+VW++
Sbjct: 69  TCEMEHSNGPYGENLAEGYDEMTGVEAVKFWATEKKFYNHHLNRCVGDECGHYTQIVWRH 128

Query: 127 SFLVGCATVKCKNNWSLVSCNYSPSGNVVGE 157
           +  +GC  VKC+NNW  V CNY+P GN +G+
Sbjct: 129 TTNIGCGRVKCENNWVFVICNYNPPGNYIGQ 159

[Close]

BLAST of CSPI07G06620 vs. NCBI nr
Match: gi|659110143|ref|XP_008455071.1| (PREDICTED: basic form of pathogenesis-related protein 1-like [Cucumis melo])

HSP 1 Score: 182.6 bits (462), Expect = 5.9e-43
Identity = 84/150 (56.00%), Postives = 102/150 (68.00%), Query Frame = 1


Query: 7   LSALCIVALALTPIVIAQNSPQDFFDAHNAVRAKVGAEPLFWDEELEAYAKNYITSKIKT 66
           +S + +  + L PI +AQNS QDF +AHN  RAKVG  P+ W+  L AYA+ Y   KI T
Sbjct: 9   ISFMMMGLITLAPITLAQNSHQDFVNAHNNARAKVGVGPVSWNYTLAAYAQTYANKKIGT 68

Query: 67  CEMVHFVGPYGENLATANPVLTAAAAVNTWAAEKKYYNHNSNKCEGGECRHYRQLVWKNS 126
           CEM H  GPYGENLA     +TA  AVN W +EKKYY+H+SN+C G ECRHY Q+VW+ +
Sbjct: 69  CEMQHSYGPYGENLAEGYGEMTAVEAVNFWVSEKKYYDHHSNRCIGDECRHYTQVVWRGT 128

Query: 127 FLVGCATVKCKNNWSLVSCNYSPSGNVVGE 157
             VGCA VKC NNW  V CNY P GN VG+
Sbjct: 129 KHVGCARVKCHNNWIFVICNYDPPGNYVGQ 158

The following BLAST results are available for this feature:

BLAST of CSPI07G06620 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PRB1_TOBAC	2.2e-42	50.31	Basic form of pathogenesis-related protein 1 OS=Nicotiana tabacum PE=3 SV=1	[more]
PR1B_TOBAC	4.0e-39	55.15	Pathogenesis-related protein 1B OS=Nicotiana tabacum PE=2 SV=1	[more]
PR1C_TOBAC	7.5e-38	49.69	Pathogenesis-related protein 1C OS=Nicotiana tabacum PE=2 SV=3	[more]
PR1A_TOBAC	4.8e-37	49.69	Pathogenesis-related protein 1A OS=Nicotiana tabacum PE=1 SV=1	[more]
PR1_SAMNI	1.6e-35	46.45	Pathogenesis-related protein PR-1 type OS=Sambucus nigra PE=2 SV=1	[more]

BLAST of CSPI07G06620 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K4C6_CUCSA	6.8e-62	71.34	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G070250 PE=3 SV=1	[more]
E2GEV3_9ROSI	2.0e-42	54.11	Pathogenesis-related protein 1 OS=Vitis hybrid cultivar GN=PR-1 PE=3 SV=1	[more]
F6HBN9_VITVI	2.7e-42	54.11	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_03s0088g00690 PE=3 SV=...	[more]
A5BC26_VITVI	2.7e-42	54.11	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_042545 PE=3 SV=1	[more]
A0A0A0K4C1_CUCSA	3.5e-42	58.57	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G070225 PE=3 SV=1	[more]

BLAST of CSPI07G06620 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G14580.1	4.4e-36	44.59	basic pathogenesis-related protein 1	[more]
AT3G19690.1	1.3e-35	42.59	CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-r...	[more]
AT1G50060.1	2.8e-35	47.33	CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-r...	[more]
AT2G14610.1	1.4e-34	43.95	pathogenesis-related gene 1	[more]
AT4G33720.1	9.1e-34	45.81	CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-r...	[more]

BLAST of CSPI07G06620 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449438610\|ref\|XP_004137081.1\|	4.3e-86	99.36	PREDICTED: basic form of pathogenesis-related protein 1-like [Cucumis sativus]	[more]
gi\|778724761\|ref\|XP_004137082.2\|	9.7e-62	71.34	PREDICTED: basic form of pathogenesis-related protein 1-like [Cucumis sativus]	[more]
gi\|659110135\|ref\|XP_008455067.1\|	9.7e-62	69.23	PREDICTED: pathogenesis-related protein 1A-like [Cucumis melo]	[more]
gi\|659110137\|ref\|XP_008455068.1\|	4.5e-43	54.97	PREDICTED: basic form of pathogenesis-related protein 1-like [Cucumis melo]	[more]
gi\|659110143\|ref\|XP_008455071.1\|	5.9e-43	56.00	PREDICTED: basic form of pathogenesis-related protein 1-like [Cucumis melo]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001283	Allrgn_V5/Tpx1
IPR014044	CAP_domain
IPR018244	Allrgn_V5/Tpx1_CS

Vocabulary: **Cellular Component**
Term	Definition
GO:0005576	extracellular region

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005576	extracellular region
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI07G06620.1	CSPI07G06620.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001283	Cysteine-rich secretory protein, allergen V5/Tpx-1-related	PRINTS	PR00837	V5TPXLIKE	coord: 115..131 score: 6.2E-14coord: 46..64 score: 6.2E-14coord: 142..155 score: 6.2E-14coord: 92..105 score: 6.2
IPR001283	Cysteine-rich secretory protein, allergen V5/Tpx-1-related	PANTHER	PTHR10334	CYSTEINE-RICH SECRETORY PROTEIN-RELATED	coord: 1..157 score: 8.7
IPR014044	CAP domain	GENE3D	G3DSA:3.40.33.10		coord: 20..159 score: 1.6
IPR014044	CAP domain	PFAM	PF00188	CAP	coord: 31..147 score: 4.5
IPR014044	CAP domain	SMART	SM00198	SCP_3	coord: 25..155 score: 1.1
IPR014044	CAP domain	unknown	SSF55797	PR-1-like	coord: 24..159 score: 1.44
IPR018244	Allergen V5/Tpx-1-related, conserved site	PROSITE	PS01010	CRISP_2	coord: 142..153 scor
None	No IPR available	PANTHER	PTHR10334:SF223	F2J10.6 PROTEIN-RELATED	coord: 1..157 score: 8.7

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CSPI07G06620	Csa7G070240	Cucumber (Chinese Long) v2	cpicuB354
CSPI07G06620	Lsi03G006190	Bottle gourd (USVL1VR-Ls)	cpilsiB536
CSPI07G06620	Cla97C02G034050	Watermelon (97103) v2	cpiwmbB554
CSPI07G06620	Bhi05G000847	Wax gourd	cpiwgoB672
CSPI07G06620	Cucsa.218930	Cucumber (Gy14) v1	cgycpiB336
CSPI07G06620	CmaCh19G005280	Cucurbita maxima (Rimu)	cmacpiB534
CSPI07G06620	CmoCh19G005390	Cucurbita moschata (Rifu)	cmocpiB525
CSPI07G06620	Cp4.1LG15g04150	Cucurbita pepo (Zucchini)	cpecpiB258

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CSPI07G06620	Cucurbita pepo (Zucchini)	cpecpiB470
CSPI07G06620	Cucurbita pepo (Zucchini)	cpecpiB697
CSPI07G06620	Cucurbita pepo (Zucchini)	cpecpiB804
CSPI07G06620	Bottle gourd (USVL1VR-Ls)	cpilsiB534
CSPI07G06620	Bottle gourd (USVL1VR-Ls)	cpilsiB550
CSPI07G06620	Melon (DHL92) v3.6.1	cpimedB558
CSPI07G06620	Melon (DHL92) v3.6.1	cpimedB523
CSPI07G06620	Melon (DHL92) v3.6.1	cpimedB542
CSPI07G06620	Cucumber (Gy14) v2	cgybcpiB088
CSPI07G06620	Cucumber (Gy14) v2	cgybcpiB199
CSPI07G06620	Cucumber (Gy14) v2	cgybcpiB332
CSPI07G06620	Silver-seed gourd	carcpiB0214
CSPI07G06620	Silver-seed gourd	carcpiB0493
CSPI07G06620	Silver-seed gourd	carcpiB0767
CSPI07G06620	Cucumber (Chinese Long) v3	cpicucB386
CSPI07G06620	Cucumber (Chinese Long) v3	cpicucB405
CSPI07G06620	Cucumber (Chinese Long) v3	cpicucB415
CSPI07G06620	Watermelon (97103) v2	cpiwmbB542
CSPI07G06620	Watermelon (97103) v2	cpiwmbB580
CSPI07G06620	Wax gourd	cpiwgoB659
CSPI07G06620	Wax gourd	cpiwgoB689
CSPI07G06620	Wild cucumber (PI 183967)	cpicpiB091
CSPI07G06620	Wild cucumber (PI 183967)	cpicpiB170
CSPI07G06620	Cucumber (Gy14) v1	cgycpiB582
CSPI07G06620	Cucurbita maxima (Rimu)	cmacpiB143
CSPI07G06620	Cucurbita maxima (Rimu)	cmacpiB786
CSPI07G06620	Cucurbita moschata (Rifu)	cmocpiB136
CSPI07G06620	Cucurbita moschata (Rifu)	cmocpiB777
CSPI07G06620	Cucumber (Chinese Long) v2	cpicuB333
CSPI07G06620	Cucumber (Chinese Long) v2	cpicuB347
CSPI07G06620	Melon (DHL92) v3.5.1	cpimeB538
CSPI07G06620	Melon (DHL92) v3.5.1	cpimeB557
CSPI07G06620	Melon (DHL92) v3.5.1	cpimeB569
CSPI07G06620	Melon (DHL92) v3.5.1	cpimeB573
CSPI07G06620	Watermelon (Charleston Gray)	cpiwcgB561
CSPI07G06620	Watermelon (Charleston Gray)	cpiwcgB576
CSPI07G06620	Watermelon (Charleston Gray)	cpiwcgB599
CSPI07G06620	Watermelon (97103) v1	cpiwmB594
CSPI07G06620	Watermelon (97103) v1	cpiwmB596
CSPI07G06620	Watermelon (97103) v1	cpiwmB623