CSPI07G06360 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI07G06360
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionUnknown protein
LocationChr7 : 4683712 .. 4684314 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCGAAGAAATCATTGATACTTGTAGGTATGGTTACTACATGGTTTATGGGTATGTCACTAACAATTACCAATCCCCACCTACAGCGTCAACCACGAAACCAAATTCGTTTTCGACGCAACTCGCCAACATATATCAGACGAATGGACCTGAATTATTTCAAACTTCAACTCAGATGTCAGCACTTCCAAACATGTGAAGAAGGCAATAGAAACACAACAACTTTACTTTGTGAACACATAAGTTCACAGCATCACCTAGCAACTTTAGAACCAATTCCTATCTCCATCTTCATGCATGGTGACGGAACTTTGGAGGGATTAATTTATCAGGAGTTTCAGATAGATGTACAGAGATGTACATCATCAACATCGAACTTGTGGTCGACGAAATAATAAATCATTGGGTTAGAAAAGTTGAAGAAGAAGAAGAAGAAGAAGAAGATGAAGTGAATAGTACTTGTAGGGTGTTTGAAAAGATTTATCCTCTTGAAATTGTGATGGAGTTGTTGGTTTTTGAGACAACTCGTGAGATAGATCATCAACCACAAGTAATGACAGCTCCAACAAGCGACAGTGACGAAGTACTGGAGAGTATGTAA

mRNA sequence

ATGGCCGAAGAAATCATTGATACTTGTAGGTATGGTTACTACATGGTTTATGGGTATGTCACTAACAATTACCAATCCCCACCTACAGCGTCAACCACGAAACCAAATTCGTTTTCGACGCAACTCGCCAACATATATCAGACGAATGGACCTGAATTATTTCAAACTTCAACTCAGATGTCAGCACTTCCAAACATAAAAGTTGAAGAAGAAGAAGAAGAAGAAGAAGATGAAGTGAATAGTACTTGTAGGGTGTTTGAAAAGATTTATCCTCTTGAAATTGTGATGGAGTTGTTGGTTTTTGAGACAACTCGTGAGATAGATCATCAACCACAAGTAATGACAGCTCCAACAAGCGACAGTGACGAAGTACTGGAGAGTATGTAA

Coding sequence (CDS)

ATGGCCGAAGAAATCATTGATACTTGTAGGTATGGTTACTACATGGTTTATGGGTATGTCACTAACAATTACCAATCCCCACCTACAGCGTCAACCACGAAACCAAATTCGTTTTCGACGCAACTCGCCAACATATATCAGACGAATGGACCTGAATTATTTCAAACTTCAACTCAGATGTCAGCACTTCCAAACATAAAAGTTGAAGAAGAAGAAGAAGAAGAAGAAGATGAAGTGAATAGTACTTGTAGGGTGTTTGAAAAGATTTATCCTCTTGAAATTGTGATGGAGTTGTTGGTTTTTGAGACAACTCGTGAGATAGATCATCAACCACAAGTAATGACAGCTCCAACAAGCGACAGTGACGAAGTACTGGAGAGTATGTAA
Homology
[Close]
BLAST of CSPI07G06360 vs. TrEMBL
Match: A0A0A0K679_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G068060 PE=4 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 1.2e-07
Identity = 53/133 (39.85%), Postives = 66/133 (49.62%), Query Frame = 1 

Query: 1   MAEEIIDTCRYGYYMVYGYVTNNYQSPPTASTTKPNSFSTQLANIYQTNGPELFQTSTQM 60
           MAEEIIDTCRY        VT  +      ST+K    + +   +Y     E++  + ++
Sbjct: 1   MAEEIIDTCRY-------MVTTWFMD---VSTSKHVKKAIETQQLYFELCTEMYIINIEL 60

Query: 61  SALPNI-----KVEEEEEEEEDEVNSTCRVFEKIYPLEIVMELLVFETTREIDHQPQVMT 120
                I     KVEEEEEE++                         ETTREIDHQPQVMT
Sbjct: 61  VVDEIINHWVRKVEEEEEEDD-------------------------ETTREIDHQPQVMT 98

Query: 121 APTSDSDEVLESM 129
           APTSDSD+VLESM
Sbjct: 121 APTSDSDDVLESM 98

[Close]
BLAST of CSPI07G06360 vs. TrEMBL
Match: A0A0A0K2A5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G068580 PE=4 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 3.0e-06
Identity = 34/59 (57.63%), Postives = 45/59 (76.27%), Query Frame = 1 

Query: 71  EEEEEEDEVNSTCRVFEKIYPLEIVMELLVFETTREIDHQPQV-MTAPTSDSDEVLESM 129
           EEEEE+ E +++ RVF+KIY LEI +ELL+F+  R +D+QPQV M  PTSDS   +ESM
Sbjct: 135 EEEEEDQENSTSSRVFKKIYRLEITLELLIFQIVRVMDYQPQVLMMVPTSDS--AMESM 191

[Close]
BLAST of CSPI07G06360 vs. NCBI nr
Match: gi|700188569|gb|KGN43802.1| (hypothetical protein Csa_7G068060 [Cucumis sativus])

HSP 1 Score: 64.3 bits (155), Expect = 1.8e-07
Identity = 53/133 (39.85%), Postives = 66/133 (49.62%), Query Frame = 1 

Query: 1   MAEEIIDTCRYGYYMVYGYVTNNYQSPPTASTTKPNSFSTQLANIYQTNGPELFQTSTQM 60
           MAEEIIDTCRY        VT  +      ST+K    + +   +Y     E++  + ++
Sbjct: 1   MAEEIIDTCRY-------MVTTWFMD---VSTSKHVKKAIETQQLYFELCTEMYIINIEL 60

Query: 61  SALPNI-----KVEEEEEEEEDEVNSTCRVFEKIYPLEIVMELLVFETTREIDHQPQVMT 120
                I     KVEEEEEE++                         ETTREIDHQPQVMT
Sbjct: 61  VVDEIINHWVRKVEEEEEEDD-------------------------ETTREIDHQPQVMT 98

Query: 121 APTSDSDEVLESM 129
           APTSDSD+VLESM
Sbjct: 121 APTSDSDDVLESM 98

[Close]
BLAST of CSPI07G06360 vs. NCBI nr
Match: gi|700188572|gb|KGN43805.1| (hypothetical protein Csa_7G068580 [Cucumis sativus])

HSP 1 Score: 59.7 bits (143), Expect = 4.4e-06
Identity = 34/59 (57.63%), Postives = 45/59 (76.27%), Query Frame = 1 

Query: 71  EEEEEEDEVNSTCRVFEKIYPLEIVMELLVFETTREIDHQPQV-MTAPTSDSDEVLESM 129
           EEEEE+ E +++ RVF+KIY LEI +ELL+F+  R +D+QPQV M  PTSDS   +ESM
Sbjct: 135 EEEEEDQENSTSSRVFKKIYRLEITLELLIFQIVRVMDYQPQVLMMVPTSDS--AMESM 191

The following BLAST results are available for this feature:
BLAST of CSPI07G06360 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CSPI07G06360 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K679_CUCSA1.2e-0739.85Uncharacterized protein OS=Cucumis sativus GN=Csa_7G068060 PE=4 SV=1[more]
A0A0A0K2A5_CUCSA3.0e-0657.63Uncharacterized protein OS=Cucumis sativus GN=Csa_7G068580 PE=4 SV=1[more]
BLAST of CSPI07G06360 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CSPI07G06360 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700188569|gb|KGN43802.1|1.8e-0739.85hypothetical protein Csa_7G068060 [Cucumis sativus][more]
gi|700188572|gb|KGN43805.1|4.4e-0657.63hypothetical protein Csa_7G068580 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI07G06360.1CSPI07G06360.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CSPI07G06360CsaV3_7G007330Cucumber (Chinese Long) v3cpicucB415
CSPI07G06360CsGy7G005990Cucumber (Gy14) v2cgybcpiB332
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CSPI07G06360Silver-seed gourdcarcpiB0214
CSPI07G06360Silver-seed gourdcarcpiB0322
CSPI07G06360Silver-seed gourdcarcpiB0414
CSPI07G06360Silver-seed gourdcarcpiB0493
CSPI07G06360Silver-seed gourdcarcpiB0766
CSPI07G06360Silver-seed gourdcarcpiB0767
CSPI07G06360Watermelon (97103) v2cpiwmbB542
CSPI07G06360Watermelon (97103) v2cpiwmbB554
CSPI07G06360Watermelon (97103) v2cpiwmbB584
CSPI07G06360Wax gourdcpiwgoB685
CSPI07G06360Wax gourdcpiwgoB659
CSPI07G06360Wax gourdcpiwgoB672
CSPI07G06360Cucumber (Gy14) v1cgycpiB336
CSPI07G06360Cucurbita maxima (Rimu)cmacpiB143
CSPI07G06360Cucurbita maxima (Rimu)cmacpiB156
CSPI07G06360Cucurbita maxima (Rimu)cmacpiB534
CSPI07G06360Cucurbita maxima (Rimu)cmacpiB541
CSPI07G06360Cucurbita moschata (Rifu)cmocpiB134
CSPI07G06360Cucurbita moschata (Rifu)cmocpiB136
CSPI07G06360Cucurbita moschata (Rifu)cmocpiB525
CSPI07G06360Cucurbita moschata (Rifu)cmocpiB531
CSPI07G06360Cucurbita moschata (Rifu)cmocpiB777
CSPI07G06360Cucumber (Chinese Long) v2cpicuB354
CSPI07G06360Melon (DHL92) v3.5.1cpimeB538
CSPI07G06360Melon (DHL92) v3.5.1cpimeB557
CSPI07G06360Watermelon (Charleston Gray)cpiwcgB541
CSPI07G06360Watermelon (Charleston Gray)cpiwcgB561
CSPI07G06360Watermelon (Charleston Gray)cpiwcgB576
CSPI07G06360Watermelon (Charleston Gray)cpiwcgB599
CSPI07G06360Watermelon (97103) v1cpiwmB574
CSPI07G06360Watermelon (97103) v1cpiwmB594
CSPI07G06360Watermelon (97103) v1cpiwmB596
CSPI07G06360Cucurbita pepo (Zucchini)cpecpiB258
CSPI07G06360Cucurbita pepo (Zucchini)cpecpiB264
CSPI07G06360Cucurbita pepo (Zucchini)cpecpiB472
CSPI07G06360Cucurbita pepo (Zucchini)cpecpiB696
CSPI07G06360Cucurbita pepo (Zucchini)cpecpiB697
CSPI07G06360Bottle gourd (USVL1VR-Ls)cpilsiB532
CSPI07G06360Bottle gourd (USVL1VR-Ls)cpilsiB534
CSPI07G06360Bottle gourd (USVL1VR-Ls)cpilsiB536
CSPI07G06360Melon (DHL92) v3.6.1cpimedB558
CSPI07G06360Melon (DHL92) v3.6.1cpimedB523