CSPI07G05450 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI07G05450
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionUnknown protein
LocationChr7 : 4075581 .. 4076296 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAATTTTTTGATACATGTCAGATTAGGAGCATGCCACCAATTGCCTTCTGAGATAGTCTATTTTAGAGCTTTAGAGCAACAGTTTTCCTCAATAAATGGTGATGGGCAAGCAGATGATGCACCTGGATCCTTGTACAGAAGTGTGAATGGCGAAGACTTAAAGGTACTTATCCACCGAGTGTCAAAAGAGGGAAAAGAAAACAAAGAAAAAATTGTACTACCCATGTCTTTTAATCAACAACACTAGTGTCATCTTTATATTAGTTCGGTTACTACTTACTTTACCTTATTTGTTGATTTCACATATCCTACTTGCGTTGGCCTGAACGGAATTAGAATTGAGGATGTAGTGTGTTCGCCTCCAAGAACCATATGTTTTTGTGTAGGGGTCGCAACATATCCTCACTATAGTACTAAACATAGTGATTATGAGACCGTTTCATGGGACTTGTCAATTAGGATCTTAGAATTATCCTAACTTGCTTGGAATTTTTATATCATCGATTTAATTGTTTTACTTCTAACACCCATCATCTGTTCTGTTCCATCCATAAGTTAATGTTTATGCTCATTTTCTTTATAATGCAGAATCATAGAAAGGTAGAGACACATATGGGTGAGGTCATCTGCTCAAGACACGGCGAGCCATATCCTAATGGCCGGAGCAGTTACATATATCGGAAACTATTTGGCCAATGGTTGCAAAGAAGCTAG

mRNA sequence

ATGAATTTTTTGATACATGTCAGATTAGGAGCATGCCACCAATTGCCTTCTGAGATAGTCTATTTTAGAGCTTTAGAGCAACAGTTTTCCTCAATAAATGGTGATGGGCAAGCAGATGATGCACCTGGATCCTTGTACAGAAGTGTGAATGGCGAAGACTTAAAGAATCATAGAAAGGTAGAGACACATATGGGTGAGGTCATCTGCTCAAGACACGGCGAGCCATATCCTAATGGCCGGAGCAGTTACATATATCGGAAACTATTTGGCCAATGGTTGCAAAGAAGCTAG

Coding sequence (CDS)

ATGAATTTTTTGATACATGTCAGATTAGGAGCATGCCACCAATTGCCTTCTGAGATAGTCTATTTTAGAGCTTTAGAGCAACAGTTTTCCTCAATAAATGGTGATGGGCAAGCAGATGATGCACCTGGATCCTTGTACAGAAGTGTGAATGGCGAAGACTTAAAGAATCATAGAAAGGTAGAGACACATATGGGTGAGGTCATCTGCTCAAGACACGGCGAGCCATATCCTAATGGCCGGAGCAGTTACATATATCGGAAACTATTTGGCCAATGGTTGCAAAGAAGCTAG
Homology
[Close]
BLAST of CSPI07G05450 vs. TrEMBL
Match: A0A0A0K2I8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G062740 PE=4 SV=1)

HSP 1 Score: 203.8 bits (517), Expect = 9.8e-50
Identity = 94/96 (97.92%), Postives = 96/96 (100.00%), Query Frame = 1 

Query: 1  MNFLIHVRLGACHQLPSEIVYFRALEQQFSSINGDGQADDAPGSLYRSVNGEDLKNHRKV 60
          MNFLIHVRLG+CHQLPSEIVYFRA+EQQFSSINGDGQADDAPGSLYRSVNGEDLKNHRKV
Sbjct: 1  MNFLIHVRLGSCHQLPSEIVYFRAVEQQFSSINGDGQADDAPGSLYRSVNGEDLKNHRKV 60

Query: 61 ETHMGEVICSRHGEPYPNGRSSYIYRKLFGQWLQRS 97
          ETHMGEVICSRHGEPYPNGRSSYIYRKLFGQWLQRS
Sbjct: 61 ETHMGEVICSRHGEPYPNGRSSYIYRKLFGQWLQRS 96

[Close]
BLAST of CSPI07G05450 vs. NCBI nr
Match: gi|700188475|gb|KGN43708.1| (hypothetical protein Csa_7G062740 [Cucumis sativus])

HSP 1 Score: 203.8 bits (517), Expect = 1.4e-49
Identity = 94/96 (97.92%), Postives = 96/96 (100.00%), Query Frame = 1 

Query: 1  MNFLIHVRLGACHQLPSEIVYFRALEQQFSSINGDGQADDAPGSLYRSVNGEDLKNHRKV 60
          MNFLIHVRLG+CHQLPSEIVYFRA+EQQFSSINGDGQADDAPGSLYRSVNGEDLKNHRKV
Sbjct: 1  MNFLIHVRLGSCHQLPSEIVYFRAVEQQFSSINGDGQADDAPGSLYRSVNGEDLKNHRKV 60

Query: 61 ETHMGEVICSRHGEPYPNGRSSYIYRKLFGQWLQRS 97
          ETHMGEVICSRHGEPYPNGRSSYIYRKLFGQWLQRS
Sbjct: 61 ETHMGEVICSRHGEPYPNGRSSYIYRKLFGQWLQRS 96

The following BLAST results are available for this feature:
BLAST of CSPI07G05450 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CSPI07G05450 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K2I8_CUCSA9.8e-5097.92Uncharacterized protein OS=Cucumis sativus GN=Csa_7G062740 PE=4 SV=1[more]
BLAST of CSPI07G05450 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CSPI07G05450 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700188475|gb|KGN43708.1|1.4e-4997.92hypothetical protein Csa_7G062740 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI07G05450.1CSPI07G05450.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CSPI07G05450Csa7G062740Cucumber (Chinese Long) v2cpicuB354
CSPI07G05450CsaV3_7G006400Cucumber (Chinese Long) v3cpicucB415
CSPI07G05450CsGy7G005070Cucumber (Gy14) v2cgybcpiB332
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CSPI07G05450Watermelon (97103) v2cpiwmbB584
CSPI07G05450Wax gourdcpiwgoB672
CSPI07G05450Cucumber (Gy14) v1cgycpiB336
CSPI07G05450Cucurbita maxima (Rimu)cmacpiB143
CSPI07G05450Cucurbita maxima (Rimu)cmacpiB538
CSPI07G05450Cucurbita moschata (Rifu)cmocpiB137
CSPI07G05450Cucurbita moschata (Rifu)cmocpiB529
CSPI07G05450Melon (DHL92) v3.5.1cpimeB538
CSPI07G05450Watermelon (Charleston Gray)cpiwcgB541
CSPI07G05450Watermelon (97103) v1cpiwmB590
CSPI07G05450Cucurbita pepo (Zucchini)cpecpiB262
CSPI07G05450Cucurbita pepo (Zucchini)cpecpiB697
CSPI07G05450Bottle gourd (USVL1VR-Ls)cpilsiB536
CSPI07G05450Melon (DHL92) v3.6.1cpimedB523
CSPI07G05450Silver-seed gourdcarcpiB1008