CSPI07G03210 (gene) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI07G03210
Type	gene
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	Arabinogalactan-protein
Location	Chr7 : 2565302 .. 2566569 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TAATAGTGGACATTCAAGTGCTTTCCACATGCAGCGTCAGCGTGCACTCCATCTTTCCATTACCATTATGTTCTCCTCTGTCCCACACTTCCTTCTTCTTCTTCTTCTTCTTCTTCATCTAATTCCCTCAATCCCCGCATAATTCATCGCCTCCATAATCACACAAACAACAATTCCAAAGTTCCCATCAACCCCTTTCTCTTTCTTTTTATATAAATTCACCCATTACGATCCTTCCATTTCCATACCTTTTTTGTTTTCTTTTTGTTTTGCTTCAGTAGCCATGGCAGCAGCTTCAGCTTCCGCTACTTTCAAGTTCAACCATCTCTCCTTCTCCTTCTTCTTCTTCTTCCTTCTCCTTATCTCCTCTGTTCAAATTGAAGCTAGAGTCAACAAATTCTTCAGTAAATTCATTCATACAGATCACGAGGTTGTTCCCAACACACTTTCCCCGGCGCCCCTCTCTGTTCCGCCTGAGACTTCTCCATCTCTTGCACCGACACCGGCTCCTGCGCCATTTTTCGACGAATCCCAGAATGCTTACGGTCTATACGGCAGTGATCCCGATGCCGATGAAAACACTCGGACGATTACCGACGTGGAAGAGGAGATTCTCGGAGGAGAAGGCGATCAGGACGAGGGGAATGACAAATCTGGGTTTCCGATGAACAATTTTGTTGAAACGATAAATGAGGAGGAGCAGTACCAGAACAAGAACTATGAGAACAACAATGGGTTTAGAAATTCCGAGTACGATAACCGCAATGAGTACAGAAATTCGGAGTACGAGAACAATAACAATGAGGGTAGAAATTACGAGGACCAGAGGAATTTTGAAGAGGGCGGGTACAGGAGGAGCCGATTCGAACCGACAGAGCAGGAAGGGATGAGCGATACCAGATTCATGGAGAATGGAAGGTATTTTCATGACATTAACTCGAGGAATGATGAAGAAAATGGATCGTACGGAAGTAAGAAGAAGTATCCAAAGTACGAGTTCGATTCAATGGAGGAGTATGAGAGGAGTGAGGGATTGCTTCCTTGATGAAGAGAAGGGGGGATTTTAATTAGGGTTTAACTTAAATCTATGGAAGTTTTTTCATATATATGTTGTGTGTGTGTTTATTATCTTTGAGTTGTGATTGTTTTTGCACAACTTGAATGGATATGTTGTTCTTGGATGTGATTTGAATGGAAGGGAAGAAAAAAACATGGTGTTTCCATTTTGGAAATAAATTCCATAATGAGATTTTATAGATTATATTCAA

mRNA sequence

ATGGCAGCAGCTTCAGCTTCCGCTACTTTCAAGTTCAACCATCTCTCCTTCTCCTTCTTCTTCTTCTTCCTTCTCCTTATCTCCTCTGTTCAAATTGAAGCTAGAGTCAACAAATTCTTCAGTAAATTCATTCATACAGATCACGAGGTTGTTCCCAACACACTTTCCCCGGCGCCCCTCTCTGTTCCGCCTGAGACTTCTCCATCTCTTGCACCGACACCGGCTCCTGCGCCATTTTTCGACGAATCCCAGAATGCTTACGGTCTATACGGCAGTGATCCCGATGCCGATGAAAACACTCGGACGATTACCGACGTGGAAGAGGAGATTCTCGGAGGAGAAGGCGATCAGGACGAGGGGAATGACAAATCTGGGTTTCCGATGAACAATTTTGTTGAAACGATAAATGAGGAGGAGCAGTACCAGAACAAGAACTATGAGAACAACAATGGGTTTAGAAATTCCGAGTACGATAACCGCAATGAGTACAGAAATTCGGAGTACGAGAACAATAACAATGAGGGTAGAAATTACGAGGACCAGAGGAATTTTGAAGAGGGCGGGTACAGGAGGAGCCGATTCGAACCGACAGAGCAGGAAGGGATGAGCGATACCAGATTCATGGAGAATGGAAGGTATTTTCATGACATTAACTCGAGGAATGATGAAGAAAATGGATCGTACGGAAGTAAGAAGAAGTATCCAAAGTACGAGTTCGATTCAATGGAGGAGTATGAGAGGAGTGAGGGATTGCTTCCTTGA

Coding sequence (CDS)

ATGGCAGCAGCTTCAGCTTCCGCTACTTTCAAGTTCAACCATCTCTCCTTCTCCTTCTTCTTCTTCTTCCTTCTCCTTATCTCCTCTGTTCAAATTGAAGCTAGAGTCAACAAATTCTTCAGTAAATTCATTCATACAGATCACGAGGTTGTTCCCAACACACTTTCCCCGGCGCCCCTCTCTGTTCCGCCTGAGACTTCTCCATCTCTTGCACCGACACCGGCTCCTGCGCCATTTTTCGACGAATCCCAGAATGCTTACGGTCTATACGGCAGTGATCCCGATGCCGATGAAAACACTCGGACGATTACCGACGTGGAAGAGGAGATTCTCGGAGGAGAAGGCGATCAGGACGAGGGGAATGACAAATCTGGGTTTCCGATGAACAATTTTGTTGAAACGATAAATGAGGAGGAGCAGTACCAGAACAAGAACTATGAGAACAACAATGGGTTTAGAAATTCCGAGTACGATAACCGCAATGAGTACAGAAATTCGGAGTACGAGAACAATAACAATGAGGGTAGAAATTACGAGGACCAGAGGAATTTTGAAGAGGGCGGGTACAGGAGGAGCCGATTCGAACCGACAGAGCAGGAAGGGATGAGCGATACCAGATTCATGGAGAATGGAAGGTATTTTCATGACATTAACTCGAGGAATGATGAAGAAAATGGATCGTACGGAAGTAAGAAGAAGTATCCAAAGTACGAGTTCGATTCAATGGAGGAGTATGAGAGGAGTGAGGGATTGCTTCCTTGA

Homology

[Close]

BLAST of CSPI07G03210 vs. TrEMBL
Match: A0A0A0K1D4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G038700 PE=4 SV=1)

HSP 1 Score: 482.3 bits (1240), Expect = 3.7e-133
Identity = 252/253 (99.60%), Postives = 252/253 (99.60%), Query Frame = 1


Query: 1   MAAASASATFKFNHLSFSFFFFFLLLISSVQIEARVNKFFSKFIHTDHEVVPNTLSPAPL 60
           MAAASASATFKFNHLSFSFFFFFLLLISSVQIEARVNKFFSKFIHTDHEVVPNTLSPAPL
Sbjct: 1   MAAASASATFKFNHLSFSFFFFFLLLISSVQIEARVNKFFSKFIHTDHEVVPNTLSPAPL 60

Query: 61  SVPPETSPSLAPTPAPAPFFDESQNAYGLYGSDPDADENTRTITDVEEEILGGEGDQDEG 120
           SVPPETSPSLAPTPAPAPFFDESQNAYGLYGSDPDADENTRTITDVEEEILGGEGDQDEG
Sbjct: 61  SVPPETSPSLAPTPAPAPFFDESQNAYGLYGSDPDADENTRTITDVEEEILGGEGDQDEG 120

Query: 121 NDKSGFPMNNFVETINEEEQYQNKNYENNNGFRNSEYDNRNEYRNSEYENNNNEGRNYED 180
           NDKSGFPMNNFVET NEEEQYQNKNYENNNGFRNSEYDNRNEYRNSEYENNNNEGRNYED
Sbjct: 121 NDKSGFPMNNFVETRNEEEQYQNKNYENNNGFRNSEYDNRNEYRNSEYENNNNEGRNYED 180

Query: 181 QRNFEEGGYRRSRFEPTEQEGMSDTRFMENGRYFHDINSRNDEENGSYGSKKKYPKYEFD 240
           QRNFEEGGYRRSRFEPTEQEGMSDTRFMENGRYFHDINSRNDEENGSYGSKKKYPKYEFD
Sbjct: 181 QRNFEEGGYRRSRFEPTEQEGMSDTRFMENGRYFHDINSRNDEENGSYGSKKKYPKYEFD 240

Query: 241 SMEEYERSEGLLP 254
           SMEEYERSEGLLP
Sbjct: 241 SMEEYERSEGLLP 253

[Close]

BLAST of CSPI07G03210 vs. TrEMBL
Match: A0A151SEX9_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_024735 PE=4 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 1.7e-16
Identity = 105/292 (35.96%), Postives = 127/292 (43.49%), Query Frame = 1


Query: 20  FFFFLLLISSVQIEARVNKFFSKFIH-------TDHEVVPNTLSPAPLSVP-------PE 79
           F F L+L+ S QI AR  KFFS F H        D      TL+P P   P       PE
Sbjct: 10  FVFLLVLVISPQIHAREGKFFSLFTHFRTIYNVKDPLAKSPTLAPEPAPEPTTAPGPAPE 69

Query: 80  --TSPSLAPTPA--------------------PAPFFDESQNAYGLYGS------DPDAD 139
             T P+  PTPA                    P P F ES + YGLYG        P  +
Sbjct: 70  LVTEPTQTPTPASAPGPSNSQAIGSTIPSGPAPEPEFFESGDGYGLYGRGSYSQYSPTKE 129

Query: 140 ENTRTITDVEEEILGGEGDQDEGNDKSGFPMNNFVETINEEEQYQNKNYENNNGFRNSEY 199
             T T T      L  E   DE + K+G+P  NF              Y NN  +RN++ 
Sbjct: 130 TPTTTTTTTFGNELLNEDFSDESH-KTGYPKTNF--------------YNNNEEYRNNDN 189

Query: 200 DNRNEYRNS-------EYENNNNEGRNYEDQRNFEEGGYRRSRFEPTEQEGMSDTRFMEN 250
            N  EYR S        Y NNNN+  NY    N     Y  S     ++EGMSDTRFM+N
Sbjct: 190 TNE-EYRKSYSKNYVDNYSNNNNDKENYYYNNN---NNYYSSNGYQGQREGMSDTRFMKN 249

[Close]

BLAST of CSPI07G03210 vs. TrEMBL
Match: A0A072VAX8_MEDTR (Uncharacterized protein OS=Medicago truncatula GN=MTR_2g090660 PE=4 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 8.3e-16
Identity = 97/257 (37.74%), Postives = 125/257 (48.64%), Query Frame = 1


Query: 20  FFFFLLLISSVQIEARVNKFFSKFIH--TDHEVVPNTLSPAPLSVP-PETSPSLAPT--- 79
           F F L+L  S QI+AR NKFFS F H  T H V    L  +P   P P  +P +  T   
Sbjct: 10  FLFLLVLFLSPQIQARQNKFFSFFTHFKTTHNVEDPQLPQSPAPAPEPGAAPEIESTNIP 69

Query: 80  --PAPAP-FFDESQNAYGLYGSD-----PDADENTRTITDVEEEILGGEGDQDEGNDKSG 139
             PAP P F  E+ N YGLYG D     P  +    T+TD E+E+L  E   D  + K G
Sbjct: 70  SGPAPEPQFLVETGNGYGLYGIDSSQYSPTKETPKTTLTDFEDELLN-EDFNDNKSYKKG 129

Query: 140 FPMNNFVETINEEEQYQNKNYENNNGFRNSEYDNRNEYRNSEYENNNNEGRNYEDQRNFE 199
           +P  NF    N  E Y  KNY NN   +NS     N Y   E+ NNN E +         
Sbjct: 130 YPQTNFH---NNNEVY-TKNY-NNEENKNSY----NSYNGKEFYNNNYERKG-------- 189

Query: 200 EGGYRRSRFEPTEQEGMSDTRFMENGRYFHDINSRNDEEN---------GSYGSKKKYPK 250
                         EGMSDTRFMENG+Y++++NS N++ N         GS  ++  Y K
Sbjct: 190 --------------EGMSDTRFMENGKYYYNVNSENEKYNNVNGYESGRGSTENEGNYEK 234

[Close]

BLAST of CSPI07G03210 vs. TrEMBL
Match: I3SDG5_LOTJA (Uncharacterized protein OS=Lotus japonicus PE=2 SV=1)

HSP 1 Score: 90.1 bits (222), Expect = 4.1e-15
Identity = 94/276 (34.06%), Postives = 131/276 (47.46%), Query Frame = 1


Query: 13  NHLSFSFFFFFLLLISSVQIEARVNKFFSKFIH------TDHEVV-------------PN 72
           NHLSF   F  L+L  S QI+AR  KFFS F H       D +++              +
Sbjct: 6   NHLSF---FLLLVLFLSPQIQAREGKFFSFFTHFRTNNVKDAQLLLAKAESPAQAPGPAS 65

Query: 73  TLSPAPLSVPPETSPSLAPTPAPAPFFDESQNAYGLYGSDPDAD------ENTRTITDVE 132
            L+PAP         ++   PAP P F +    YGLYG+D  +       + T T T+ E
Sbjct: 66  ALAPAPAPSAQAIGSTIPSGPAPEPEFLDMGEGYGLYGTDSSSSAQYSPTKETSTTTNFE 125

Query: 133 EEILGGEGDQDEGNDKSGFPMNNFVETINEEEQYQNKNYENNNGFRNSEYDNRNEYRNSE 192
            E+L    D  + + K+G+P  NF    N E     KNY N  G+R+++ + +  Y N+ 
Sbjct: 126 NELL--NEDFKDQSYKTGYPQTNFRSNYNNE--VYTKNY-NTEGYRSNDNNGKELYYNN- 185

Query: 193 YENNNNEGRNYEDQRNFEEGGYRRSRFEPTEQEGMSDTRFMENGRYFHDINSRNDE---- 250
             NNNN G N          GY R R      EGMSDTRFMENG+Y +++++ N+     
Sbjct: 186 --NNNNYGNN---------NGYERKR------EGMSDTRFMENGKYHYNVDTENESYNLN 245

[Close]

BLAST of CSPI07G03210 vs. TrEMBL
Match: I3SWV3_LOTJA (Uncharacterized protein OS=Lotus japonicus PE=2 SV=1)

HSP 1 Score: 89.0 bits (219), Expect = 9.2e-15
Identity = 93/276 (33.70%), Postives = 131/276 (47.46%), Query Frame = 1


Query: 13  NHLSFSFFFFFLLLISSVQIEARVNKFFSKFIH------TDHEVV-------------PN 72
           NHLSF   F  L+L  S QI+AR  KFFS F H       D +++              +
Sbjct: 6   NHLSF---FLLLVLFLSPQIQAREGKFFSFFTHFRTNNVKDAQLLLAKAESPAQAPGPAS 65

Query: 73  TLSPAPLSVPPETSPSLAPTPAPAPFFDESQNAYGLYGSDPDAD------ENTRTITDVE 132
            L+PAP         ++   PAP P F +    YGLYG+D  +       + T T T+ E
Sbjct: 66  ALAPAPAPSAQAIGSTIPSGPAPEPEFLDMGEGYGLYGTDSSSSAQYSPTKETSTTTNFE 125

Query: 133 EEILGGEGDQDEGNDKSGFPMNNFVETINEEEQYQNKNYENNNGFRNSEYDNRNEYRNSE 192
            E+L    D  + + K+G+P  NF    N E     KNY N  G+R+++ + +  Y N+ 
Sbjct: 126 NELL--NEDFKDQSYKTGYPQTNFRSNYNNE--VYTKNY-NTEGYRSNDNNGKELYYNN- 185

Query: 193 YENNNNEGRNYEDQRNFEEGGYRRSRFEPTEQEGMSDTRFMENGRYFHDINSRNDE---- 250
             NNNN G N          GY R R      EGMSDT+FMENG+Y +++++ N+     
Sbjct: 186 --NNNNYGNN---------NGYERKR------EGMSDTKFMENGKYHYNVDTENESYNLN 245

[Close]

BLAST of CSPI07G03210 vs. TAIR10
Match: AT2G33850.1 (AT2G33850.1 unknown protein)

HSP 1 Score: 50.1 bits (118), Expect = 2.4e-06
Identity = 76/270 (28.15%), Postives = 115/270 (42.59%), Query Frame = 1


Query: 12  FNHLSFSFFFFFLLLISSVQIEARVNKFFSKFIHTD-HEVVPNTLSPAPLSVPPETSPSL 71
           F+  S  FFF   L++ S QI AR +  F KF   D  E  PN L      VP ET+   
Sbjct: 3   FSTSSCLFFFLLTLVLFSTQISARNSYSFGKFQREDPKEQNPNNL------VPIETNEKK 62

Query: 72  APTPAPAPFFDESQNAYGLYGSDPDADENTRTITDVEEEILG-------------GEGDQ 131
            P      F  +S+N YGLYG +   + N     +  E+ +               +  +
Sbjct: 63  EPDDQNPAFIPQSENGYGLYGHETTDNNNEELNNNKYEDNVNYDDSFSTPSLSETAQTQE 122

Query: 132 DEGNDKSGFPMNNFVETINEEEQYQNKNYENNNGFRNSEYDN--RNEYRN------SEYE 191
              N K  +P    +   N++  Y    YEN+N +   + DN   + Y+       S YE
Sbjct: 123 SYKNYKESYPKTTEIYDNNKDTSY----YENSNAYGTDKRDNDINDPYKGYSNKDTSYYE 182

Query: 192 NNNNEGRNYEDQRNFEEGGYRRSRFEPTEQEGMSDTRFMENGRYFHDINSRNDEENG--- 247
           N N     Y  ++  +E  YR       E++GMSDTR+M NG+Y++D++  +D  +G   
Sbjct: 183 NPNT----YGTEKREKEPAYRGYN-NNVERQGMSDTRYMANGKYYYDLD--DDRNHGRFY 242

[Close]

BLAST of CSPI07G03210 vs. NCBI nr
Match: gi|778730106|ref|XP_011659700.1| (PREDICTED: protein E6-like [Cucumis sativus])

HSP 1 Score: 482.3 bits (1240), Expect = 5.4e-133
Identity = 252/253 (99.60%), Postives = 252/253 (99.60%), Query Frame = 1


Query: 1   MAAASASATFKFNHLSFSFFFFFLLLISSVQIEARVNKFFSKFIHTDHEVVPNTLSPAPL 60
           MAAASASATFKFNHLSFSFFFFFLLLISSVQIEARVNKFFSKFIHTDHEVVPNTLSPAPL
Sbjct: 1   MAAASASATFKFNHLSFSFFFFFLLLISSVQIEARVNKFFSKFIHTDHEVVPNTLSPAPL 60

Query: 61  SVPPETSPSLAPTPAPAPFFDESQNAYGLYGSDPDADENTRTITDVEEEILGGEGDQDEG 120
           SVPPETSPSLAPTPAPAPFFDESQNAYGLYGSDPDADENTRTITDVEEEILGGEGDQDEG
Sbjct: 61  SVPPETSPSLAPTPAPAPFFDESQNAYGLYGSDPDADENTRTITDVEEEILGGEGDQDEG 120

Query: 121 NDKSGFPMNNFVETINEEEQYQNKNYENNNGFRNSEYDNRNEYRNSEYENNNNEGRNYED 180
           NDKSGFPMNNFVET NEEEQYQNKNYENNNGFRNSEYDNRNEYRNSEYENNNNEGRNYED
Sbjct: 121 NDKSGFPMNNFVETRNEEEQYQNKNYENNNGFRNSEYDNRNEYRNSEYENNNNEGRNYED 180

Query: 181 QRNFEEGGYRRSRFEPTEQEGMSDTRFMENGRYFHDINSRNDEENGSYGSKKKYPKYEFD 240
           QRNFEEGGYRRSRFEPTEQEGMSDTRFMENGRYFHDINSRNDEENGSYGSKKKYPKYEFD
Sbjct: 181 QRNFEEGGYRRSRFEPTEQEGMSDTRFMENGRYFHDINSRNDEENGSYGSKKKYPKYEFD 240

Query: 241 SMEEYERSEGLLP 254
           SMEEYERSEGLLP
Sbjct: 241 SMEEYERSEGLLP 253

[Close]

BLAST of CSPI07G03210 vs. NCBI nr
Match: gi|659110946|ref|XP_008455495.1| (PREDICTED: protein E6-like [Cucumis melo])

HSP 1 Score: 424.9 bits (1091), Expect = 1.0e-115
Identity = 227/254 (89.37%), Postives = 236/254 (92.91%), Query Frame = 1


Query: 1   MAAASASATFKFNHLSFSFFFFFLLLISSVQIEARVNKFFSKFIHTDH-EVVPNTLSPAP 60
           MAAASAS TF FNHLSF    FFLLL+SSVQ EARVNKFFSKFIHTDH EVVPNTLSPAP
Sbjct: 1   MAAASASTTFNFNHLSF----FFLLLLSSVQTEARVNKFFSKFIHTDHEEVVPNTLSPAP 60

Query: 61  LSVPPETSPSLAPTPAPAPFFDESQNAYGLYGSDPDADENTRTITDVEEEILGGEGDQDE 120
           LSVPPETSPSLAPTPAPAPFFDESQNAYGLYGSDPD DEN RTITDVEEEILGGEGDQDE
Sbjct: 61  LSVPPETSPSLAPTPAPAPFFDESQNAYGLYGSDPDTDENPRTITDVEEEILGGEGDQDE 120

Query: 121 GNDKSGFPMNNFVETINEEEQYQNKNYENNNGFRNSEYDNRNEYRNSEYENNNNEGRNYE 180
            N KS FPMNNFV+T ++EEQYQNKNYE NNGFRNSEY+N NEYRNSEYENNNNEGRNY+
Sbjct: 121 TNRKSEFPMNNFVQTRDDEEQYQNKNYEYNNGFRNSEYENHNEYRNSEYENNNNEGRNYQ 180

Query: 181 DQRNFEEGGYRRSRFEPTEQEGMSDTRFMENGRYFHDINSRNDEENGSYGSKKKYPKYEF 240
            Q NFE+GGYRRSRFEPTEQ+GMSDTRFMENGRYFHDINS+NDEENGSYGSKKKYPKYEF
Sbjct: 181 YQSNFEDGGYRRSRFEPTEQQGMSDTRFMENGRYFHDINSKNDEENGSYGSKKKYPKYEF 240

Query: 241 DSMEEYERSEGLLP 254
           DSMEEYERSEGLLP
Sbjct: 241 DSMEEYERSEGLLP 250

[Close]

BLAST of CSPI07G03210 vs. NCBI nr
Match: gi|1012342161|gb|KYP53357.1| (hypothetical protein KK1_024735 [Cajanus cajan])

HSP 1 Score: 94.7 bits (234), Expect = 2.4e-16
Identity = 105/292 (35.96%), Postives = 127/292 (43.49%), Query Frame = 1


Query: 20  FFFFLLLISSVQIEARVNKFFSKFIH-------TDHEVVPNTLSPAPLSVP-------PE 79
           F F L+L+ S QI AR  KFFS F H        D      TL+P P   P       PE
Sbjct: 10  FVFLLVLVISPQIHAREGKFFSLFTHFRTIYNVKDPLAKSPTLAPEPAPEPTTAPGPAPE 69

Query: 80  --TSPSLAPTPA--------------------PAPFFDESQNAYGLYGS------DPDAD 139
             T P+  PTPA                    P P F ES + YGLYG        P  +
Sbjct: 70  LVTEPTQTPTPASAPGPSNSQAIGSTIPSGPAPEPEFFESGDGYGLYGRGSYSQYSPTKE 129

Query: 140 ENTRTITDVEEEILGGEGDQDEGNDKSGFPMNNFVETINEEEQYQNKNYENNNGFRNSEY 199
             T T T      L  E   DE + K+G+P  NF              Y NN  +RN++ 
Sbjct: 130 TPTTTTTTTFGNELLNEDFSDESH-KTGYPKTNF--------------YNNNEEYRNNDN 189

Query: 200 DNRNEYRNS-------EYENNNNEGRNYEDQRNFEEGGYRRSRFEPTEQEGMSDTRFMEN 250
            N  EYR S        Y NNNN+  NY    N     Y  S     ++EGMSDTRFM+N
Sbjct: 190 TNE-EYRKSYSKNYVDNYSNNNNDKENYYYNNN---NNYYSSNGYQGQREGMSDTRFMKN 249

[Close]

BLAST of CSPI07G03210 vs. NCBI nr
Match: gi|502082542|ref|XP_004487198.1| (PREDICTED: protein E6 [Cicer arietinum])

HSP 1 Score: 94.0 bits (232), Expect = 4.1e-16
Identity = 93/266 (34.96%), Postives = 120/266 (45.11%), Query Frame = 1


Query: 21  FFFLLLISSVQIEARVNKFFSKFIH-------TDHEVVPNTLSPAPLSVP-------PET 80
           FFF LL+ S QI+AR NKFFS F H        D + +    +PAPLS P       P  
Sbjct: 9   FFFFLLVLSPQIQARQNKFFSFFTHFKTINNVKDPQPLTTAPTPAPLSAPTPAPLSAPTQ 68

Query: 81  SPSLAPT--------PAPAPFFDESQNAYGLYGSDPDADENTRTITDVEEEILGGEGDQD 140
            PS AP         PAP P F ++ N+YGLYG D   +    T T  E E+L  E   D
Sbjct: 69  EPSAAPEIGTSIPSGPAPEPEFLDNGNSYGLYGMDSTKE----TPTTFENELLN-EDFND 128

Query: 141 EGNDKSGFPMNNFVETINEEEQYQNKNYENNNGFRNSEYDNRNEYRNSEYENNNNEGRNY 200
             + K G+P  NF                 +N + N  Y     Y + EY NN   G   
Sbjct: 129 NKSYKKGYPQTNF-----------------HNNYNNEVYTKT--YNSEEYNNNYVNG--- 188

Query: 201 EDQRNFEEGGYRRSRFEPTEQEGMSDTRFMENGRYFHDINSR---------------NDE 250
                +E  G           EGMSDTRFMENG+Y++++N+                N+ 
Sbjct: 189 -----YERKG-----------EGMSDTRFMENGKYYYNVNNEKDNYNLNGYESERGSNEN 230

[Close]

BLAST of CSPI07G03210 vs. NCBI nr
Match: gi|922393483|ref|XP_013465149.1| (hypothetical protein MTR_2g090660 [Medicago truncatula])

HSP 1 Score: 92.4 bits (228), Expect = 1.2e-15
Identity = 97/257 (37.74%), Postives = 125/257 (48.64%), Query Frame = 1


Query: 20  FFFFLLLISSVQIEARVNKFFSKFIH--TDHEVVPNTLSPAPLSVP-PETSPSLAPT--- 79
           F F L+L  S QI+AR NKFFS F H  T H V    L  +P   P P  +P +  T   
Sbjct: 10  FLFLLVLFLSPQIQARQNKFFSFFTHFKTTHNVEDPQLPQSPAPAPEPGAAPEIESTNIP 69

Query: 80  --PAPAP-FFDESQNAYGLYGSD-----PDADENTRTITDVEEEILGGEGDQDEGNDKSG 139
             PAP P F  E+ N YGLYG D     P  +    T+TD E+E+L  E   D  + K G
Sbjct: 70  SGPAPEPQFLVETGNGYGLYGIDSSQYSPTKETPKTTLTDFEDELLN-EDFNDNKSYKKG 129

Query: 140 FPMNNFVETINEEEQYQNKNYENNNGFRNSEYDNRNEYRNSEYENNNNEGRNYEDQRNFE 199
           +P  NF    N  E Y  KNY NN   +NS     N Y   E+ NNN E +         
Sbjct: 130 YPQTNFH---NNNEVY-TKNY-NNEENKNSY----NSYNGKEFYNNNYERKG-------- 189

Query: 200 EGGYRRSRFEPTEQEGMSDTRFMENGRYFHDINSRNDEEN---------GSYGSKKKYPK 250
                         EGMSDTRFMENG+Y++++NS N++ N         GS  ++  Y K
Sbjct: 190 --------------EGMSDTRFMENGKYYYNVNSENEKYNNVNGYESGRGSTENEGNYEK 234

The following BLAST results are available for this feature:

BLAST of CSPI07G03210 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CSPI07G03210 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K1D4_CUCSA	3.7e-133	99.60	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G038700 PE=4 SV=1	[more]
A0A151SEX9_CAJCA	1.7e-16	35.96	Uncharacterized protein OS=Cajanus cajan GN=KK1_024735 PE=4 SV=1	[more]
A0A072VAX8_MEDTR	8.3e-16	37.74	Uncharacterized protein OS=Medicago truncatula GN=MTR_2g090660 PE=4 SV=1	[more]
I3SDG5_LOTJA	4.1e-15	34.06	Uncharacterized protein OS=Lotus japonicus PE=2 SV=1	[more]
I3SWV3_LOTJA	9.2e-15	33.70	Uncharacterized protein OS=Lotus japonicus PE=2 SV=1	[more]

BLAST of CSPI07G03210 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G33850.1	2.4e-06	28.15	unknown protein	[more]

BLAST of CSPI07G03210 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778730106\|ref\|XP_011659700.1\|	5.4e-133	99.60	PREDICTED: protein E6-like [Cucumis sativus]	[more]
gi\|659110946\|ref\|XP_008455495.1\|	1.0e-115	89.37	PREDICTED: protein E6-like [Cucumis melo]	[more]
gi\|1012342161\|gb\|KYP53357.1\|	2.4e-16	35.96	hypothetical protein KK1_024735 [Cajanus cajan]	[more]
gi\|502082542\|ref\|XP_004487198.1\|	4.1e-16	34.96	PREDICTED: protein E6 [Cicer arietinum]	[more]
gi\|922393483\|ref\|XP_013465149.1\|	1.2e-15	37.74	hypothetical protein MTR_2g090660 [Medicago truncatula]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI07G03210.1	CSPI07G03210.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR35274	FAMILY NOT NAMED	coord: 12..249 score: 2.5

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CSPI07G03210	Cla015640	Watermelon (97103) v1	cpiwmB624
CSPI07G03210	Csa7G038700	Cucumber (Chinese Long) v2	cpicuB354
CSPI07G03210	MELO3C018867	Melon (DHL92) v3.5.1	cpimeB538
CSPI07G03210	ClCG02G002350	Watermelon (Charleston Gray)	cpiwcgB574
CSPI07G03210	Lsi11G013960	Bottle gourd (USVL1VR-Ls)	cpilsiB505
CSPI07G03210	MELO3C018867.2	Melon (DHL92) v3.6.1	cpimedB523
CSPI07G03210	CsaV3_7G003100	Cucumber (Chinese Long) v3	cpicucB415
CSPI07G03210	Cla97C02G028800	Watermelon (97103) v2	cpiwmbB553
CSPI07G03210	Bhi05G001235	Wax gourd	cpiwgoB681
CSPI07G03210	Cucsa.181170	Cucumber (Gy14) v1	cgycpiB287
CSPI07G03210	CmoCh19G009070	Cucurbita moschata (Rifu)	cmocpiB524
CSPI07G03210	Cp4.1LG15g07230	Cucurbita pepo (Zucchini)	cpecpiB257
CSPI07G03210	Carg04176	Silver-seed gourd	carcpiB0235

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CSPI07G03210	Cucumber (Chinese Long) v3	cpicucB385
CSPI07G03210	Cucumber (Chinese Long) v3	cpicucB419
CSPI07G03210	Watermelon (97103) v2	cpiwmbB552
CSPI07G03210	Wax gourd	cpiwgoB680
CSPI07G03210	Wax gourd	cpiwgoB691
CSPI07G03210	Wild cucumber (PI 183967)	cpicpiB090
CSPI07G03210	Cucurbita maxima (Rimu)	cmacpiB144
CSPI07G03210	Cucurbita maxima (Rimu)	cmacpiB533
CSPI07G03210	Cucurbita maxima (Rimu)	cmacpiB576
CSPI07G03210	Cucurbita moschata (Rifu)	cmocpiB131
CSPI07G03210	Cucurbita moschata (Rifu)	cmocpiB568
CSPI07G03210	Cucumber (Chinese Long) v2	cpicuB326
CSPI07G03210	Cucumber (Chinese Long) v2	cpicuB358
CSPI07G03210	Melon (DHL92) v3.5.1	cpimeB535
CSPI07G03210	Watermelon (97103) v1	cpiwmB621
CSPI07G03210	Cucurbita pepo (Zucchini)	cpecpiB301
CSPI07G03210	Cucurbita pepo (Zucchini)	cpecpiB692
CSPI07G03210	Bottle gourd (USVL1VR-Ls)	cpilsiB498
CSPI07G03210	Bottle gourd (USVL1VR-Ls)	cpilsiB514
CSPI07G03210	Melon (DHL92) v3.6.1	cpimedB521
CSPI07G03210	Cucumber (Gy14) v2	cgybcpiB087
CSPI07G03210	Cucumber (Gy14) v2	cgybcpiB332
CSPI07G03210	Silver-seed gourd	carcpiB1103