CSPI07G01770 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI07G01770
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionUnknown protein
LocationChr7 : 1556923 .. 1557441 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTTGCACGCGTGCGGCTAGGTAGTCGGCTTGCGGAAGAGAGCCGGCTCGAAATGTTTGCACGCATGCAGCTTGGAGACGTGCAGCTTGATCCTGACGGAATGGCTCGTGTAACGGCTCGGGTCTAAAACGCGGCTTGATGGAGAAGCTTTAGCTGGGACGCGCGGCTCGGACTAAGGATCGGCTCAGGTCCAACGGAGCGTGTGTCTTTGGTTCGAACGGCTCACACGAAAATATGCGACTCGAGCTTGAAGCTGACGGAGAAGACTATCGCACGGTTGGGAGGTTGTCGGCTCAGATCTGGAACGCGGCTGGCTTCGACGGAGCGGCGACAGAACGCTGCAGACGCGACGACGAAGAGGTTACGGCTGCCGGTAGGACGCGATCAACACGACGGCTTCGTGTGCGACGAGCGGCTGGCTTCGACGATGAAGAAGACACGCGAAGGAGATGGCTTGGGTAGAAGGGTGAAGAGCGGCGGCTAGGGCTGGAGAGGAAGGAAGAAATACAGGTTGAAG

mRNA sequence

ATGCTTGCACGCGTGCGGCTAGGTAGTCGGCTTGCGGAAGAGAGCCGGCTCGAAATGTTTGCACGCATGCAGCTTGGAGACGTGCAGCTTGATCCTGACGGAATGGCTCGTGTAACGGCTCGGCTGGGACGCGCGGCTCGGACTAAGGATCGGCTCAGGTCCAACGGAGCGTGTGTCTTTGGTTCGAACGGCTCACACGAAAATATGCGACTCGAGCTTGAAGCTGACGGAGAAGACTATCGCACGGTTGGGAGGTTGTCGGCTCAGATCTGGAACGCGGCTGGCTTCGACGGAGCGGCGACAGAACGCTGCAGACGCGACGACGAAGAGGTTACGGCTGCCGGTAGGACGCGATCAACACGACGGCTTCGTGTGCGACGAGCGGCTGGCTTCGACGATGAAGAAGACACGCGAAGGAGATGGCTTGGGTAG

Coding sequence (CDS)

ATGCTTGCACGCGTGCGGCTAGGTAGTCGGCTTGCGGAAGAGAGCCGGCTCGAAATGTTTGCACGCATGCAGCTTGGAGACGTGCAGCTTGATCCTGACGGAATGGCTCGTGTAACGGCTCGGCTGGGACGCGCGGCTCGGACTAAGGATCGGCTCAGGTCCAACGGAGCGTGTGTCTTTGGTTCGAACGGCTCACACGAAAATATGCGACTCGAGCTTGAAGCTGACGGAGAAGACTATCGCACGGTTGGGAGGTTGTCGGCTCAGATCTGGAACGCGGCTGGCTTCGACGGAGCGGCGACAGAACGCTGCAGACGCGACGACGAAGAGGTTACGGCTGCCGGTAGGACGCGATCAACACGACGGCTTCGTGTGCGACGAGCGGCTGGCTTCGACGATGAAGAAGACACGCGAAGGAGATGGCTTGGGTAG
Homology
[Close]
BLAST of CSPI07G01770 vs. TrEMBL
Match: A0A0A0K1K2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G024170 PE=4 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 2.8e-32
Identity = 72/75 (96.00%), Postives = 74/75 (98.67%), Query Frame = 1 

Query: 69  MRLELEADGEDYRTVGRLSAQIWNAAGFDGAATERCRRDDEEVTAAGRTRSTRRLRVRRA 128
           MRLELE DGEDYRTVGRLSA+IWNAAGFDGAATERCRR+DEEVTAAGRTRSTRRLRVRRA
Sbjct: 1   MRLELEVDGEDYRTVGRLSARIWNAAGFDGAATERCRREDEEVTAAGRTRSTRRLRVRRA 60

Query: 129 AGFDDEEDTRRRWLG 144
           AGFDDEEDTRRRWLG
Sbjct: 61  AGFDDEEDTRRRWLG 75

[Close]
BLAST of CSPI07G01770 vs. NCBI nr
Match: gi|700188110|gb|KGN43343.1| (hypothetical protein Csa_7G024170 [Cucumis sativus])

HSP 1 Score: 146.4 bits (368), Expect = 4.0e-32
Identity = 72/75 (96.00%), Postives = 74/75 (98.67%), Query Frame = 1 

Query: 69  MRLELEADGEDYRTVGRLSAQIWNAAGFDGAATERCRRDDEEVTAAGRTRSTRRLRVRRA 128
           MRLELE DGEDYRTVGRLSA+IWNAAGFDGAATERCRR+DEEVTAAGRTRSTRRLRVRRA
Sbjct: 1   MRLELEVDGEDYRTVGRLSARIWNAAGFDGAATERCRREDEEVTAAGRTRSTRRLRVRRA 60

Query: 129 AGFDDEEDTRRRWLG 144
           AGFDDEEDTRRRWLG
Sbjct: 61  AGFDDEEDTRRRWLG 75

The following BLAST results are available for this feature:
BLAST of CSPI07G01770 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CSPI07G01770 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K1K2_CUCSA2.8e-3296.00Uncharacterized protein OS=Cucumis sativus GN=Csa_7G024170 PE=4 SV=1[more]
BLAST of CSPI07G01770 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CSPI07G01770 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700188110|gb|KGN43343.1|4.0e-3296.00hypothetical protein Csa_7G024170 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI07G01770.1CSPI07G01770.1mRNA