CSPI06G35370 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI06G35370
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionUnknown protein
LocationChr6 : 28790672 .. 28791610 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CAACCGCCGTGCATCACACGCTATATTTTTTTTTCAAATTAATTATCATTAATTTCGATAGCCCACTTTAGAAACCTTGCAAATTTGAAAATTAATCCTCATCATCTCAATCCCATATATCCCATCCCCCAATATGAATCATCGGATCATCAGCTCTTGATTAACCACACAGATAAATATGTATTTACATTATCATATCTCTCCAGTAATTAATTTAAACTCTATATCTCTAATTTCCACATAAAGTCATCAAAGAAAAAAAAAGAAGAAGAAGAAGAAGTTAAGACGATTGACCGTGTTGACCGATAATCTTCCGGCGTTTGAAAGGAAAAACTTTGGTAAAATCCTGTTCCGCCACCGTCAGATGCCACCCCTCCACCGTATCCAATTCAAGCTGATGAATAATCCCAGAAGCCGCATCGTAATACTGCCCATAATCCTCAGACAGCTCGCCGGAAAGGGTCCGGCAATTAGGCGGCGGCTTGGCTCTCCGACGACCAGCTCCGATGGGTACGTTACGGAGCGCCCCACCGGCAGTCCAGTACCTTTGACAACCCTTGCAGAAATGTCTAGGCTGATTAACATTGTAATTGTTGAAGTAACAGAATTTGGTGTCCATACTCTTACATCTTGGACATGGAATAATCTTTTCCGGCCTCTTCATCTCTGTTTCGTCACCTTCACCACCGCCGGCGACCGCTCCGCCTTTCTCCGGTTCCTCCTTCAATTTTCGGGTTTGTAAATGAATCATAGTTCCAAAAAGTTTAATTCCATCGGTGTTGCTACTATGAACCTCAGCCATATGTAAAAACAGAGAGAGAAACAGAGACCACTCAGGAACTTTTTCCCCCCCACCTCCCTAAATTATTCTGTGTGTTTTGGAAGAGTGTATTGTGTAGAGAAGACATATAGGGAAATGGGTTTATATATGAATTGAGA

mRNA sequence

ATGCCACCCCTCCACCGTATCCAATTCAAGCTGATGAATAATCCCAGAAGCCGCATCGTAATACTGCCCATAATCCTCAGACAGCTCGCCGGAAAGGGTCCGGCAATTAGGCGGCGGCTTGGCTCTCCGACGACCAGCTCCGATGGGTACGTTACGGAGCGCCCCACCGGCAGTCCAGTACCTTTGACAACCCTTGCAGAAATGTCTAGGCTGATTAACATTGTAATTGTTGAAGTAACAGAATTTGGTGTCCATACTCTTACATCTTGGACATGGAATAATCTTTTCCGGCCTCTTCATCTCTGTTTCGTCACCTTCACCACCGCCGGCGACCGCTCCGCCTTTCTCCGGTTCCTCCTTCAATTTTCGGGTTTGTAA

Coding sequence (CDS)

ATGCCACCCCTCCACCGTATCCAATTCAAGCTGATGAATAATCCCAGAAGCCGCATCGTAATACTGCCCATAATCCTCAGACAGCTCGCCGGAAAGGGTCCGGCAATTAGGCGGCGGCTTGGCTCTCCGACGACCAGCTCCGATGGGTACGTTACGGAGCGCCCCACCGGCAGTCCAGTACCTTTGACAACCCTTGCAGAAATGTCTAGGCTGATTAACATTGTAATTGTTGAAGTAACAGAATTTGGTGTCCATACTCTTACATCTTGGACATGGAATAATCTTTTCCGGCCTCTTCATCTCTGTTTCGTCACCTTCACCACCGCCGGCGACCGCTCCGCCTTTCTCCGGTTCCTCCTTCAATTTTCGGGTTTGTAA
Homology
[Close]
BLAST of CSPI06G35370 vs. TrEMBL
Match: A0A0A0KHV6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G519575 PE=4 SV=1)

HSP 1 Score: 240.7 bits (613), Expect = 9.4e-61
Identity = 120/125 (96.00%), Postives = 122/125 (97.60%), Query Frame = 1 

Query: 1   MPPLHRIQFKLMNNPRSRIVILPIILRQLAGKGPAIRRRLGSPTTSSDGYVTERPTGSPV 60
           MPPLHRIQFKLMNNPRSRIVILPIILRQLAGKGPAIRRRLGS TTSSDGYVTERPTG PV
Sbjct: 1   MPPLHRIQFKLMNNPRSRIVILPIILRQLAGKGPAIRRRLGSSTTSSDGYVTERPTGRPV 60

Query: 61  PLTTLAEMSRLINIVIVEVTEFGVHTLTSWTWNNLFRPLHLCFVTFTTAGDRSAFLRFLL 120
           PLTTLAEMSRLINIVIVEVTEFGVHTLTSWTWNNLFRPLHLCF+TFTTAGDRS+FL FLL
Sbjct: 61  PLTTLAEMSRLINIVIVEVTEFGVHTLTSWTWNNLFRPLHLCFITFTTAGDRSSFLWFLL 120

Query: 121 QFSGL 126
           QFSGL
Sbjct: 121 QFSGL 125

[Close]
BLAST of CSPI06G35370 vs. NCBI nr
Match: gi|700194101|gb|KGN49305.1| (hypothetical protein Csa_6G519575 [Cucumis sativus])

HSP 1 Score: 240.7 bits (613), Expect = 1.3e-60
Identity = 120/125 (96.00%), Postives = 122/125 (97.60%), Query Frame = 1 

Query: 1   MPPLHRIQFKLMNNPRSRIVILPIILRQLAGKGPAIRRRLGSPTTSSDGYVTERPTGSPV 60
           MPPLHRIQFKLMNNPRSRIVILPIILRQLAGKGPAIRRRLGS TTSSDGYVTERPTG PV
Sbjct: 1   MPPLHRIQFKLMNNPRSRIVILPIILRQLAGKGPAIRRRLGSSTTSSDGYVTERPTGRPV 60

Query: 61  PLTTLAEMSRLINIVIVEVTEFGVHTLTSWTWNNLFRPLHLCFVTFTTAGDRSAFLRFLL 120
           PLTTLAEMSRLINIVIVEVTEFGVHTLTSWTWNNLFRPLHLCF+TFTTAGDRS+FL FLL
Sbjct: 61  PLTTLAEMSRLINIVIVEVTEFGVHTLTSWTWNNLFRPLHLCFITFTTAGDRSSFLWFLL 120

Query: 121 QFSGL 126
           QFSGL
Sbjct: 121 QFSGL 125

The following BLAST results are available for this feature:
BLAST of CSPI06G35370 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CSPI06G35370 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KHV6_CUCSA9.4e-6196.00Uncharacterized protein OS=Cucumis sativus GN=Csa_6G519575 PE=4 SV=1[more]
BLAST of CSPI06G35370 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CSPI06G35370 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700194101|gb|KGN49305.1|1.3e-6096.00hypothetical protein Csa_6G519575 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI06G35370.1CSPI06G35370.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CSPI06G35370Bhi03G000228Wax gourdcpiwgoB634
CSPI06G35370Carg15344Silver-seed gourdcarcpiB0584
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CSPI06G35370Cucumber (Chinese Long) v2cpicuB265
CSPI06G35370Cucumber (Chinese Long) v2cpicuB313
CSPI06G35370Melon (DHL92) v3.5.1cpimeB453
CSPI06G35370Melon (DHL92) v3.5.1cpimeB512
CSPI06G35370Watermelon (Charleston Gray)cpiwcgB453
CSPI06G35370Watermelon (Charleston Gray)cpiwcgB486
CSPI06G35370Watermelon (97103) v1cpiwmB496
CSPI06G35370Cucurbita pepo (Zucchini)cpecpiB046
CSPI06G35370Cucurbita pepo (Zucchini)cpecpiB083
CSPI06G35370Cucurbita pepo (Zucchini)cpecpiB256
CSPI06G35370Cucurbita pepo (Zucchini)cpecpiB503
CSPI06G35370Cucurbita pepo (Zucchini)cpecpiB527
CSPI06G35370Bottle gourd (USVL1VR-Ls)cpilsiB439
CSPI06G35370Bottle gourd (USVL1VR-Ls)cpilsiB444
CSPI06G35370Melon (DHL92) v3.6.1cpimedB447
CSPI06G35370Melon (DHL92) v3.6.1cpimedB496
CSPI06G35370Cucumber (Gy14) v2cgybcpiB040
CSPI06G35370Cucumber (Gy14) v2cgybcpiB287
CSPI06G35370Silver-seed gourdcarcpiB0175
CSPI06G35370Silver-seed gourdcarcpiB0564
CSPI06G35370Silver-seed gourdcarcpiB0836
CSPI06G35370Cucumber (Chinese Long) v3cpicucB313
CSPI06G35370Cucumber (Chinese Long) v3cpicucB363
CSPI06G35370Watermelon (97103) v2cpiwmbB433
CSPI06G35370Watermelon (97103) v2cpiwmbB477
CSPI06G35370Wax gourdcpiwgoB644
CSPI06G35370Wild cucumber (PI 183967)cpicpiB042
CSPI06G35370Watermelon (97103) v1cpiwmB519
CSPI06G35370Cucumber (Gy14) v1cgycpiB028
CSPI06G35370Cucumber (Gy14) v1cgycpiB329
CSPI06G35370Cucurbita maxima (Rimu)cmacpiB231
CSPI06G35370Cucurbita maxima (Rimu)cmacpiB426
CSPI06G35370Cucurbita maxima (Rimu)cmacpiB532
CSPI06G35370Cucurbita maxima (Rimu)cmacpiB686
CSPI06G35370Cucurbita maxima (Rimu)cmacpiB893
CSPI06G35370Cucurbita moschata (Rifu)cmocpiB218
CSPI06G35370Cucurbita moschata (Rifu)cmocpiB418
CSPI06G35370Cucurbita moschata (Rifu)cmocpiB678
CSPI06G35370Cucurbita moschata (Rifu)cmocpiB873