CSPI06G32180 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI06G32180
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionRNA-binding (RRM/RBD/RNP motif) family protein
LocationChr6 : 27200493 .. 27203976 (+)
Genome Viewer
Gene Expression
   



Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TGCACAAAAGTATAGCATGCACGTAATGTACCGGATAATTATTAAAACACAATACGGAAAAGTTGTTTCTCACGAAGCCATAAAGTTTCTCAGCTGGGGGTCGCACAATTCACGACGGCGAGATTTCGACTGCTGAGGCTCGTGGAGAGGTCGTCTTCAGAAACCCTAAAAACTCTTCTCTGCATCTGTACTGTTCTTCAGCTTTTTCTGGCCGCCGTTTTTGTTTTGATCTCATTCTGAAAAAAATGGTAAATCTCTTTTTTCTTTTTTCTTTTTCTTTTTCATTTCTGTTCATCTTTCTTCGGTTTCCGTTGTTTTTATTTGATCGATGAAAGGTTTAATAATCGAACGCTTCTGATTCTGTGCAGGCCGATGTTCATCGCAAAAGGTGAGCTTATGAAATGCTTTGTTGAGATTATTTACTTCTTACGGTTGACGATCTTGGGGTTTTTTGACCTAGGGCACAGAGATGATTTGTGTTGCAGCATTTTTTGTCTCTTCTAGCGTTTTAACTTTTGAGTTACCTTTATGAGATTTCGATTAACTAGATTTTAACTCTTCCATTGAAGAAATAATTAGTCCACGAGCTGTGAACATCTTTAGGATGAATCTTATTTCATTCATTTGAGTGGTCTGCTACTAGGTTAAAGGGTCGAGCATTTTCTTGATATACAATTCGTAATTTTGTTTTTTTTAGGGTAGTAGTTGGTGGTTGTGATTTTTTTTCTTTCTGGAATGCTATTTTCTTCTTCCAGTCTTGATGTTTGTTGATCTCTTGAAAATCATTTTGGTAGTATATCATCTTTCCTTAAGAAGTCCTATTAGGTAGTACATAAGAAATCAATTTCATTGCAACTATGATTTATATTGATGGAGTTTGAGAGTTTTGGATATTATCATTTTGAGGTTCTTATAGGGTTTTGAATTGGGTCGAGAGCCATGTCAAAGAACTTTGGTCAGTTGAACTTGTACCCATAGTTGTAATTTGAAAATTTGAGCTTGGAATAATTTTTGGTGATTGAACTTTCCTTGTTATATTAGTTTTCTTTTTCCATTTTGAACATATTAATTTGTTGGAGTAACTGGCTGTTTTTGTATTTACACCTTAATGATTAAGGATTACCGAAAGATGGGTGAATGAGATAATGTGTTTGCCATAATATATGACATGGCAGTTTAAACATTTATAACATTCAATTTTTTTAGAATATTAGTAATTGTAATGTCTGTAGATTCTTGGCGTTAGTAATACTTATGGTTACAAGTAACACAGGTACTCTCGATCTCCTTCTCCCTGGAAAGCTCCTTCAAGATCAAGATCCAGATCCAGATCACGATCGAGACCCAGGTCCAGGTCCAGATCATGGTCAAGGCCAAGATCCCCAAGTCGTGGAAGGTTGGTTTTGATTGTTTTTTATTACTTGGATCAATTGAAAGTATAAACTACTTTTATGTCTGAACTTTGGTATCTTATAACCCTTTTCTTATGGTACTTGTTTCTGATTCAGATCAAGGTCCAGAAGTCGTGGGAGGTCAGTTTCTCTAGCTGGAACCCTGGACAAATAATAATGAACTCCCTGTCTCAGTGCTTAATTGGGTCTATTCGTGTTTCTTTTCACAGACTGTTTTTGTTTTGATTATCCTTGTTAACATGTTTACCTTCTTCCAGGGAGCATGCCAACAACCCTGGGAATACGCTTTATGTCACTGGTCTATCTACAAGAGTCACTGAAAGAGACCTTGAAGAGCATTTTTCCAAGGAGGGCAAGGTTAGCTTCTGCATCCTAATTACTTGCAGTTAATTGGATGATCCTGTGAGAGATCCATAGTTTGTCCATGGTCTGAAAACAACTGTTACAGCATAAAACAAGATTGTAATATCTAAAAATGTGTAAACAGTATTTATTGACTTCAAGAAACATTAAAATGGAATTTGGATTAGACACCAAATGGCCTAAAGTTATAGTGTTGTCAACTTTTTTTTTTTTTTGGTTGTAATGCTTAAGTTTTGCAGGTAGCTTCTTGTTTCCTTGTGGTTGAGCCTCGAACACGGATTTCTCGTGGTTTTGCATTTGTTACGATGGACAATGTAGATGATGCTAATCGGTGTGTTAAGCATCTCAACCAGTCAATTCTAGAAGGTCGATATATAACTGTGGAGAAGGTACTGTGATTGTTCTGATGTGGATATTATTCTAGAATTTCGGTCGTTTTCTTTTTTTCTCTTAACTTGGAGGTTTTCTGGTTATATTCAGAACAAGTTTGTGTCAGCTATGTTGGCAGCAATCAAAGATGATGAGTTCATCCATGTCAACTTTAGTGAAACAGCTTGGTCAATGACAAGCTTAAACAACAGATTTCAAATGCGCCTGATCAACTAAACATATCAACTATATTGCCCAACAACTTTTCTTCATCAGCATTCACTTTCAACACAACTAACCAACGGACATTATCAAGAACTTTCTAATCAGGCTTTTATGGTATTTCATGCCTAGCATTCATTGGACACTAGTCAATTTTTCCCAACTCCTGATATCAAGTGCATCCTTTTTTGGTGGCCACTTTCCTCCCATGAATATTTCTTATGAATGGTTCTTTGCCAACAATTTCAAAACTAGTTTTTGCATATAGCGCTCACCTGGAAAACTATACCAACGATAATAACCTCTTCTAATTTAAGATTGGACTAGGACCTAGGTTAATAAAAGAAATGAGATGACACAATTTTTGTCTTTCAGTCACGGAGGAAACGGCCAAGAACTCCAACGCCAGGACACTATTTGGGTTTGAAAAGCACTAGAGACTCTGGTAAGCTCAACCGTAAACATATCTTATGCATTGTAATTTCTCAAACATTACCTGTTACATTTGTTGCTTCTTGTATTAGGCTATCGTGGCGGCGATCGAGGTAGTAGTAGGTATCGTGGTGGTGGTGGCTCCTTCCGTGAAGACTATGGGTATCGTCGGTCTCCAAGACGCTCACCATATCGAGGGGCTCGTGAATACTCCCCTAGACACTCCCCCCCTTATGGTGGGGGAAGATCAAGAAGGGATCACTCAAGGTCGCCGCCACCTTACTCTCCTCCTTACGGCGGTAGCCCGGATAGGAGGTATCCTCGTGGCTCTAGGTGAGGGTGAGGGTGAGGCCCCTTTTAATGTACTTCAATGGTTGCTGTTAGTCAAGGACCAAGGTGGATGGTTGTGTGTCCTCAGAATCTCTGTCTCATAGTTGTAAGCAGTCCCAACTGGCCGAGTGGTCATCATCCTATGCTTTTTTAGTTCGGTGTTCTGACTTTGTTCTAGTAAACAATATTGTTACAAATATTGGTATGTGTCTTGTGAATCTTAATTTTCGCTTTTATCACCGTGGTTTATTAGACAATATGGTAAATTAGTTTTTTCCTCTTACCATTTAAAGGCAATTTTATAATGCTTTATATTTTTTAATATATTAAAGAAGTATTATGGGGTCATCATGAAA

mRNA sequence

ATGGCCGATGTTCATCGCAAAAGGTACTCTCGATCTCCTTCTCCCTGGAAAGCTCCTTCAAGATCAAGATCCAGATCCAGATCACGATCGAGACCCAGGTCCAGGTCCAGATCATGGTCAAGGCCAAGATCCCCAAGTCGTGGAAGATCAAGGTCCAGAAGTCGTGGGAGGGAGCATGCCAACAACCCTGGGAATACGCTTTATGTCACTGGTCTATCTACAAGAGTCACTGAAAGAGACCTTGAAGAGCATTTTTCCAAGGAGGGCAAGGTAGCTTCTTGTTTCCTTGTGGTTGAGCCTCGAACACGGATTTCTCGTGGTTTTGCATTTGTTACGATGGACAATGTAGATGATGCTAATCGGTGTGTTAAGCATCTCAACCAGTCAATTCTAGAAGGTCGATATATAACTGTGGAGAAGTCACGGAGGAAACGGCCAAGAACTCCAACGCCAGGACACTATTTGGGTTTGAAAAGCACTAGAGACTCTGGCTATCGTGGCGGCGATCGAGGTAGTAGTAGGTATCGTGGTGGTGGTGGCTCCTTCCGTGAAGACTATGGGTATCGTCGGTCTCCAAGACGCTCACCATATCGAGGGGCTCGTGAATACTCCCCTAGACACTCCCCCCCTTATGGTGGGGGAAGATCAAGAAGGGATCACTCAAGGTCGCCGCCACCTTACTCTCCTCCTTACGGCGGTAGCCCGGATAGGAGGTATCCTCGTGGCTCTAGGTGA

Coding sequence (CDS)

ATGGCCGATGTTCATCGCAAAAGGTACTCTCGATCTCCTTCTCCCTGGAAAGCTCCTTCAAGATCAAGATCCAGATCCAGATCACGATCGAGACCCAGGTCCAGGTCCAGATCATGGTCAAGGCCAAGATCCCCAAGTCGTGGAAGATCAAGGTCCAGAAGTCGTGGGAGGGAGCATGCCAACAACCCTGGGAATACGCTTTATGTCACTGGTCTATCTACAAGAGTCACTGAAAGAGACCTTGAAGAGCATTTTTCCAAGGAGGGCAAGGTAGCTTCTTGTTTCCTTGTGGTTGAGCCTCGAACACGGATTTCTCGTGGTTTTGCATTTGTTACGATGGACAATGTAGATGATGCTAATCGGTGTGTTAAGCATCTCAACCAGTCAATTCTAGAAGGTCGATATATAACTGTGGAGAAGTCACGGAGGAAACGGCCAAGAACTCCAACGCCAGGACACTATTTGGGTTTGAAAAGCACTAGAGACTCTGGCTATCGTGGCGGCGATCGAGGTAGTAGTAGGTATCGTGGTGGTGGTGGCTCCTTCCGTGAAGACTATGGGTATCGTCGGTCTCCAAGACGCTCACCATATCGAGGGGCTCGTGAATACTCCCCTAGACACTCCCCCCCTTATGGTGGGGGAAGATCAAGAAGGGATCACTCAAGGTCGCCGCCACCTTACTCTCCTCCTTACGGCGGTAGCCCGGATAGGAGGTATCCTCGTGGCTCTAGGTGA
Homology
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BLAST of CSPI06G32180 vs. Swiss-Prot
Match: SR45A_ARATH (Serine/arginine-rich splicing factor SR45a OS=Arabidopsis thaliana GN=SR45A PE=1 SV=1)

HSP 1 Score: 146.0 bits (367), Expect = 5.5e-34
Identity = 115/248 (46.37%), Postives = 139/248 (56.05%), Query Frame = 1 

Query: 1   MADVHRKRYSRSPSPWKAPSRSRSRSRSRSRPRSRSRSWSRPRSPSRGRSRSRSRGREHA 60
           M+   R RYS S SP+    + R RS SRS  RS +RS S                   A
Sbjct: 31  MSYSRRSRYSPSLSPY---DKRRGRSVSRSLSRSPTRSVS-----------------SDA 90

Query: 61  NNPGNTLYVTGLSTRVTERDLEEHFSKEGKVASCFLVVEPRTRISRGFAFVTMDNVDDAN 120
            NPGN+LYVTGLS RVTERDLE+HF+KEGKV    LV++P TR SRGF F++M +V DAN
Sbjct: 91  ENPGNSLYVTGLSHRVTERDLEDHFAKEGKVTDVHLVLDPWTRESRGFGFISMKSVGDAN 150

Query: 121 RCVKHLNQSILEGRYITVEKSRRKRPRTPTPGHYLGLKSTRDSGYRGGDRGSSRYRGGGG 180
           RC++ L+ S+L+GR ITVEK+RR+R RTPTPG YLGL++ R            R++    
Sbjct: 151 RCIRSLDHSVLQGRVITVEKARRRRGRTPTPGKYLGLRTAR-----------GRHKSPSY 210

Query: 181 SFREDYGYRRSPRRSPYRGAREYSPRHSPPYGGGRSRRDHSRSPPP-------YSPPYGG 240
           S R      RS  RS Y   R  S  +SP YG    RR  S S  P       YSP    
Sbjct: 211 SPRRSVSCSRSRSRS-YSSDRGRS--YSPSYG----RRGRSSSYSPFYRRRRFYSPSRSP 240

Query: 241 SPDRRYPR 242
           SPD RY R
Sbjct: 271 SPDDRYNR 240

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BLAST of CSPI06G32180 vs. Swiss-Prot
Match: TRA2B_RAT (Transformer-2 protein homolog beta OS=Rattus norvegicus GN=Tra2b PE=1 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 1.8e-21
Identity = 108/250 (43.20%), Postives = 128/250 (51.20%), Query Frame = 1 

Query: 8   RYSRSPSPWKAPSRSRSRSRSRSR-PRSRSRSWSRPRSPSRGRSRSRSRGREHANNPGNT 67
           R SRS S  ++ SRSRSR  SR    RSRSRS S  RS SR  SR   R   H+++P +T
Sbjct: 44  RRSRSKSRSRSESRSRSRRSSRRHYTRSRSRSRSHRRSRSRSYSRDYRRRHSHSHSPMST 103

Query: 68  ----------------LYVTGLSTRVTERDLEEHFSKEGKVASCFLVVEPRTRISRGFAF 127
                           L V GLS   TERDL E FSK G +A   +V + ++R SRGFAF
Sbjct: 104 RRRHVGNRANPDPNCCLGVFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAF 163

Query: 128 VTMDNVDDANRCVKHLNQSILEGRYITVEKSRRKRPRTPTPGHYLGLKS-----TRDSGY 187
           V  +NVDDA    +  N   L+GR I V+ S  KRP TPTPG Y+G  +      RD   
Sbjct: 164 VYFENVDDAKEAKERANGMELDGRRIRVDFSITKRPHTPTPGIYMGRPTYGSSRRRDYYD 223

Query: 188 RGGDRG-------SSRYRGGGGSFREDYGYRRSPRRSPYRGAREYSPRHSPPYGGGRSR- 228
           RG DRG       S  YRGGGG      G+R +  R      R  SP +S   GG RSR 
Sbjct: 224 RGYDRGYDDRDYYSRSYRGGGGG---GGGWRAAQDRDQIYRRRSPSPYYS--RGGYRSRS 283

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BLAST of CSPI06G32180 vs. Swiss-Prot
Match: TRA2B_MOUSE (Transformer-2 protein homolog beta OS=Mus musculus GN=Tra2b PE=1 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 1.8e-21
Identity = 108/250 (43.20%), Postives = 128/250 (51.20%), Query Frame = 1 

Query: 8   RYSRSPSPWKAPSRSRSRSRSRSR-PRSRSRSWSRPRSPSRGRSRSRSRGREHANNPGNT 67
           R SRS S  ++ SRSRSR  SR    RSRSRS S  RS SR  SR   R   H+++P +T
Sbjct: 44  RRSRSKSRSRSESRSRSRRSSRRHYTRSRSRSRSHRRSRSRSYSRDYRRRHSHSHSPMST 103

Query: 68  ----------------LYVTGLSTRVTERDLEEHFSKEGKVASCFLVVEPRTRISRGFAF 127
                           L V GLS   TERDL E FSK G +A   +V + ++R SRGFAF
Sbjct: 104 RRRHVGNRANPDPNCCLGVFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAF 163

Query: 128 VTMDNVDDANRCVKHLNQSILEGRYITVEKSRRKRPRTPTPGHYLGLKS-----TRDSGY 187
           V  +NVDDA    +  N   L+GR I V+ S  KRP TPTPG Y+G  +      RD   
Sbjct: 164 VYFENVDDAKEAKERANGMELDGRRIRVDFSITKRPHTPTPGIYMGRPTYGSSRRRDYYD 223

Query: 188 RGGDRG-------SSRYRGGGGSFREDYGYRRSPRRSPYRGAREYSPRHSPPYGGGRSR- 228
           RG DRG       S  YRGGGG      G+R +  R      R  SP +S   GG RSR 
Sbjct: 224 RGYDRGYDDRDYYSRSYRGGGGG---GGGWRAAQDRDQIYRRRSPSPYYS--RGGYRSRS 283

[Close]
BLAST of CSPI06G32180 vs. Swiss-Prot
Match: TRA2B_HUMAN (Transformer-2 protein homolog beta OS=Homo sapiens GN=TRA2B PE=1 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 1.8e-21
Identity = 108/250 (43.20%), Postives = 128/250 (51.20%), Query Frame = 1 

Query: 8   RYSRSPSPWKAPSRSRSRSRSRSR-PRSRSRSWSRPRSPSRGRSRSRSRGREHANNPGNT 67
           R SRS S  ++ SRSRSR  SR    RSRSRS S  RS SR  SR   R   H+++P +T
Sbjct: 44  RRSRSKSRSRSESRSRSRRSSRRHYTRSRSRSRSHRRSRSRSYSRDYRRRHSHSHSPMST 103

Query: 68  ----------------LYVTGLSTRVTERDLEEHFSKEGKVASCFLVVEPRTRISRGFAF 127
                           L V GLS   TERDL E FSK G +A   +V + ++R SRGFAF
Sbjct: 104 RRRHVGNRANPDPNCCLGVFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAF 163

Query: 128 VTMDNVDDANRCVKHLNQSILEGRYITVEKSRRKRPRTPTPGHYLGLKS-----TRDSGY 187
           V  +NVDDA    +  N   L+GR I V+ S  KRP TPTPG Y+G  +      RD   
Sbjct: 164 VYFENVDDAKEAKERANGMELDGRRIRVDFSITKRPHTPTPGIYMGRPTYGSSRRRDYYD 223

Query: 188 RGGDRG-------SSRYRGGGGSFREDYGYRRSPRRSPYRGAREYSPRHSPPYGGGRSR- 228
           RG DRG       S  YRGGGG      G+R +  R      R  SP +S   GG RSR 
Sbjct: 224 RGYDRGYDDRDYYSRSYRGGGGG---GGGWRAAQDRDQIYRRRSPSPYYS--RGGYRSRS 283

[Close]
BLAST of CSPI06G32180 vs. Swiss-Prot
Match: TRA2B_BOVIN (Transformer-2 protein homolog beta OS=Bos taurus GN=TRA2B PE=2 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 1.8e-21
Identity = 108/250 (43.20%), Postives = 128/250 (51.20%), Query Frame = 1 

Query: 8   RYSRSPSPWKAPSRSRSRSRSRSR-PRSRSRSWSRPRSPSRGRSRSRSRGREHANNPGNT 67
           R SRS S  ++ SRSRSR  SR    RSRSRS S  RS SR  SR   R   H+++P +T
Sbjct: 44  RRSRSKSRSRSESRSRSRRSSRRHYTRSRSRSRSHRRSRSRSYSRDYRRRHSHSHSPMST 103

Query: 68  ----------------LYVTGLSTRVTERDLEEHFSKEGKVASCFLVVEPRTRISRGFAF 127
                           L V GLS   TERDL E FSK G +A   +V + ++R SRGFAF
Sbjct: 104 RRRHVGNRANPDPNCCLGVFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAF 163

Query: 128 VTMDNVDDANRCVKHLNQSILEGRYITVEKSRRKRPRTPTPGHYLGLKS-----TRDSGY 187
           V  +NVDDA    +  N   L+GR I V+ S  KRP TPTPG Y+G  +      RD   
Sbjct: 164 VYFENVDDAKEAKERANGMELDGRRIRVDFSITKRPHTPTPGIYMGRPTYGSSRRRDYYD 223

Query: 188 RGGDRG-------SSRYRGGGGSFREDYGYRRSPRRSPYRGAREYSPRHSPPYGGGRSR- 228
           RG DRG       S  YRGGGG      G+R +  R      R  SP +S   GG RSR 
Sbjct: 224 RGYDRGYDDRDYYSRSYRGGGGG---GGGWRAAQDRDQIYRRRSPSPYYS--RGGYRSRS 283

[Close]
BLAST of CSPI06G32180 vs. TrEMBL
Match: A0A0A0KMM4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G507340 PE=4 SV=1)

HSP 1 Score: 473.4 bits (1217), Expect = 1.7e-130
Identity = 244/244 (100.00%), Postives = 244/244 (100.00%), Query Frame = 1 

Query: 1   MADVHRKRYSRSPSPWKAPSRSRSRSRSRSRPRSRSRSWSRPRSPSRGRSRSRSRGREHA 60
           MADVHRKRYSRSPSPWKAPSRSRSRSRSRSRPRSRSRSWSRPRSPSRGRSRSRSRGREHA
Sbjct: 1   MADVHRKRYSRSPSPWKAPSRSRSRSRSRSRPRSRSRSWSRPRSPSRGRSRSRSRGREHA 60

Query: 61  NNPGNTLYVTGLSTRVTERDLEEHFSKEGKVASCFLVVEPRTRISRGFAFVTMDNVDDAN 120
           NNPGNTLYVTGLSTRVTERDLEEHFSKEGKVASCFLVVEPRTRISRGFAFVTMDNVDDAN
Sbjct: 61  NNPGNTLYVTGLSTRVTERDLEEHFSKEGKVASCFLVVEPRTRISRGFAFVTMDNVDDAN 120

Query: 121 RCVKHLNQSILEGRYITVEKSRRKRPRTPTPGHYLGLKSTRDSGYRGGDRGSSRYRGGGG 180
           RCVKHLNQSILEGRYITVEKSRRKRPRTPTPGHYLGLKSTRDSGYRGGDRGSSRYRGGGG
Sbjct: 121 RCVKHLNQSILEGRYITVEKSRRKRPRTPTPGHYLGLKSTRDSGYRGGDRGSSRYRGGGG 180

Query: 181 SFREDYGYRRSPRRSPYRGAREYSPRHSPPYGGGRSRRDHSRSPPPYSPPYGGSPDRRYP 240
           SFREDYGYRRSPRRSPYRGAREYSPRHSPPYGGGRSRRDHSRSPPPYSPPYGGSPDRRYP
Sbjct: 181 SFREDYGYRRSPRRSPYRGAREYSPRHSPPYGGGRSRRDHSRSPPPYSPPYGGSPDRRYP 240

Query: 241 RGSR 245
           RGSR
Sbjct: 241 RGSR 244

[Close]
BLAST of CSPI06G32180 vs. TrEMBL
Match: M5VQZ0_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010685mg PE=4 SV=1)

HSP 1 Score: 327.4 bits (838), Expect = 1.5e-86
Identity = 191/251 (76.10%), Postives = 208/251 (82.87%), Query Frame = 1 

Query: 1   MADVHRKRYSRSPSPWKAPSRSRSRSRSRSRPRSRSRSWSRPR----SPSRGRSRSRSRG 60
           MAD  RK+YSRSPSPW+A  +SRSRSRS SRPRSRSRSWSRPR    S SRGRSRSRS G
Sbjct: 1   MADSPRKKYSRSPSPWRA--QSRSRSRSWSRPRSRSRSWSRPRQSSHSRSRGRSRSRSPG 60

Query: 61  REHANNPGNTLYVTGLSTRVTERDLEEHFSKEGKVASCFLVVEPRTRISRGFAFVTMDNV 120
           R  A NPGNTLYVTGLSTRV+E+D+E HFSKEGKVASCFLVVEPRTRISRGFAFVTMD+V
Sbjct: 61  RPAAINPGNTLYVTGLSTRVSEKDVERHFSKEGKVASCFLVVEPRTRISRGFAFVTMDSV 120

Query: 121 DDANRCVKHLNQSILEGRYITVEKSRRKRPRTPTPGHYLGLKSTRDSGYRG---GDRGSS 180
           +DA RC+KHLNQS+LEGRYITVE+SRRKRPRTPTPGHYLGLK+TRD GYRG   GDR   
Sbjct: 121 EDAERCIKHLNQSVLEGRYITVERSRRKRPRTPTPGHYLGLKNTRDYGYRGDRDGDRDRD 180

Query: 181 RYRGGGGSFREDYGYRRSPRRSPYRGAREYSPRHSPPYGGGRSRRDHSRSPPPYSPPYGG 240
           R R  GGS R+DYGYRRSPRRSPYRG R+YSPR SP   GGRSRR+ S SP        G
Sbjct: 181 RGRYRGGSGRDDYGYRRSPRRSPYRGGRDYSPRGSP--YGGRSRRERSYSP-------YG 240

Query: 241 SPDRRYPRGSR 245
           SP+R+Y RGSR
Sbjct: 241 SPERKYARGSR 240

[Close]
BLAST of CSPI06G32180 vs. TrEMBL
Match: A0A0S3T4D2_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.10G147500 PE=4 SV=1)

HSP 1 Score: 326.6 bits (836), Expect = 2.5e-86
Identity = 196/250 (78.40%), Postives = 207/250 (82.80%), Query Frame = 1 

Query: 1   MADVHRKRYSRSPSPWKAPSRSRSRSRSRSRPRSRSRSWSRPRSPSR--GRSRSRSRGRE 60
           MAD   +R SRSPSPW+A SRSRSRSR RSR RSRS    RPRS SR  GRSRSRS  R 
Sbjct: 1   MADSPPRRNSRSPSPWRAQSRSRSRSRPRSRSRSRSFEKQRPRSRSRSRGRSRSRSNDRM 60

Query: 61  HANNPGNTLYVTGLSTRVTERDLEEHFSKEGKVASCFLVVEPRTRISRGFAFVTMDNVDD 120
              N GNTLYVTGLS+RVTERDLEEHFSKEGKVASCFLVVEPRTRISRGFAF+TMDNV+D
Sbjct: 61  ETKNTGNTLYVTGLSSRVTERDLEEHFSKEGKVASCFLVVEPRTRISRGFAFITMDNVED 120

Query: 121 ANRCVKHLNQSILEGRYITVEKSRRKRPRTPTPGHYLGLKSTRDSGYRGGDRGSSRYRGG 180
           ANRC+K+LNQS+LEGRYITVE+SRRKR RTPTPGHYLGLKSTRD GYRG DRG  RYRGG
Sbjct: 121 ANRCIKYLNQSVLEGRYITVERSRRKRARTPTPGHYLGLKSTRDYGYRG-DRG--RYRGG 180

Query: 181 GGSFREDYGYR----RSPRRSPYRGAREYSPRHSPPYGGGRSRRDHSRSPPPYSPPYGGS 240
           G S REDY YR    RSPRRSPYRG R+YSPRHSPP  GGR+RRD SRS  PYSP   GS
Sbjct: 181 G-SGREDYAYRGERGRSPRRSPYRGGRDYSPRHSPPPYGGRTRRDRSRS-LPYSP--YGS 240

Query: 241 PDRRYPRGSR 245
           PDRRY RGSR
Sbjct: 241 PDRRYARGSR 243

[Close]
BLAST of CSPI06G32180 vs. TrEMBL
Match: V4RV28_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10026375mg PE=4 SV=1)

HSP 1 Score: 321.2 bits (822), Expect = 1.1e-84
Identity = 193/250 (77.20%), Postives = 208/250 (83.20%), Query Frame = 1 

Query: 1   MADVHRKRYSRSPSPWKAPSRSRSRSRS--RSRPRSRSRSWSRPR----SPSRGRSRSRS 60
           MAD  RK+  RSPSP +  SRSRSRSRS  RSR RSRS SWSRPR    S SRGRSRSRS
Sbjct: 1   MADSPRKKDLRSPSPVRELSRSRSRSRSFSRSRSRSRSGSWSRPRQRSRSQSRGRSRSRS 60

Query: 61  RGREHANNPGNTLYVTGLSTRVTERDLEEHFSKEGKVASCFLVVEPRTRISRGFAFVTMD 120
           RGR    NPGNTLYVTGLSTRVTERDLE+HFSKEGKVASCFLVVEPRTRISRGFAFVTMD
Sbjct: 61  RGRTETGNPGNTLYVTGLSTRVTERDLEKHFSKEGKVASCFLVVEPRTRISRGFAFVTMD 120

Query: 121 NVDDANRCVKHLNQSILEGRYITVEKSRRKRPRTPTPGHYLGLKSTRDSGYRGGDRGSSR 180
           +V+DA RC+K+LNQS+LEGRYITVE+SRRKRPRTPTPGHYLGLKS+RD G   GDRG  R
Sbjct: 121 SVEDAERCIKYLNQSVLEGRYITVERSRRKRPRTPTPGHYLGLKSSRDIGR--GDRG--R 180

Query: 181 YRGGGGSFREDYGYRRSPRRSPYRGAREYSPRHSPPYGGGRSRRDHSRSPPPYSPPYGGS 240
           YR    S R+DYGYRRSPRRSPYRG R+YSPRHSPPY GGRSRR+ SRS P    PY GS
Sbjct: 181 YR----SSRDDYGYRRSPRRSPYRGGRDYSPRHSPPY-GGRSRRERSRSVP--RSPY-GS 238

Query: 241 PDRRYPRGSR 245
           P+R+Y RGSR
Sbjct: 241 PERKYARGSR 238

[Close]
BLAST of CSPI06G32180 vs. TrEMBL
Match: A0A067G739_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g026421mg PE=4 SV=1)

HSP 1 Score: 321.2 bits (822), Expect = 1.1e-84
Identity = 193/250 (77.20%), Postives = 207/250 (82.80%), Query Frame = 1 

Query: 1   MADVHRKRYSRSPSPWKAPSRSRSRSRS--RSRPRSRSRSWSRPR----SPSRGRSRSRS 60
           MAD  RK+  RSPSP +  SRSRSRSRS  RSR RSRS SWSRPR    S SRGRSRSRS
Sbjct: 1   MADSPRKKDLRSPSPVRELSRSRSRSRSFSRSRSRSRSGSWSRPRQRSRSQSRGRSRSRS 60

Query: 61  RGREHANNPGNTLYVTGLSTRVTERDLEEHFSKEGKVASCFLVVEPRTRISRGFAFVTMD 120
           RGR    NPGNTLYVTGLSTRVTERDLE+HFSKEGKVASCFLVVEPRTRISRGFAFVTMD
Sbjct: 61  RGRTETGNPGNTLYVTGLSTRVTERDLEKHFSKEGKVASCFLVVEPRTRISRGFAFVTMD 120

Query: 121 NVDDANRCVKHLNQSILEGRYITVEKSRRKRPRTPTPGHYLGLKSTRDSGYRGGDRGSSR 180
            V+DA RC+K+LNQS+LEGRYITVE+SRRKRPRTPTPGHYLGLKS+RD G   GDRG  R
Sbjct: 121 GVEDAERCIKYLNQSVLEGRYITVERSRRKRPRTPTPGHYLGLKSSRDIGR--GDRG--R 180

Query: 181 YRGGGGSFREDYGYRRSPRRSPYRGAREYSPRHSPPYGGGRSRRDHSRSPPPYSPPYGGS 240
           YR G    R+DYGYRRSPRRSPYRG R+YSPRHSPPY GGRSRR+ SRS P    PY GS
Sbjct: 181 YRSG----RDDYGYRRSPRRSPYRGGRDYSPRHSPPY-GGRSRRERSRSVP--RSPY-GS 238

Query: 241 PDRRYPRGSR 245
           P+R+Y RGSR
Sbjct: 241 PERKYARGSR 238

[Close]
BLAST of CSPI06G32180 vs. TAIR10
Match: AT4G35785.5 (AT4G35785.5 RNA-binding (RRM/RBD/RNP motifs) family protein)

HSP 1 Score: 172.2 bits (435), Expect = 4.0e-43
Identity = 110/162 (67.90%), Postives = 122/162 (75.31%), Query Frame = 1 

Query: 1   MADV-HRKRYSRSPSPWK--APSRSRSRSRSRSRPR--SRSRSWSRPRSPSRGR------ 60
           MAD   R+R SRSPSP K  A SRSRSRSRSRSRPR  SRSRS  RP SPSR R      
Sbjct: 1   MADSPQRRRDSRSPSPRKERARSRSRSRSRSRSRPRLRSRSRSLPRPVSPSRSRGRILRG 60

Query: 61  -----------SRSRSRGREHANNPGNTLYVTGLSTRVTERDLEEHFSKEGKVASCFLVV 120
                      SRSRSRG E   NPG TLYVTGLSTRVT++DLE HF+KEGKVASCFLV+
Sbjct: 61  NLFFITCTLCRSRSRSRGSE-VENPGTTLYVTGLSTRVTDKDLEAHFAKEGKVASCFLVM 120

Query: 121 EPRTRISRGFAFVTMDNVDDANRCVKHLNQSILEGRYITVEK 141
           EPRTR+SRGFAFVTM ++ DA RC+K+LNQS+LEGRYITVE+
Sbjct: 121 EPRTRVSRGFAFVTMSSLKDAERCIKYLNQSVLEGRYITVER 161

[Close]
BLAST of CSPI06G32180 vs. TAIR10
Match: AT1G07350.1 (AT1G07350.1 RNA-binding (RRM/RBD/RNP motifs) family protein)

HSP 1 Score: 146.0 bits (367), Expect = 3.1e-35
Identity = 115/248 (46.37%), Postives = 139/248 (56.05%), Query Frame = 1 

Query: 1   MADVHRKRYSRSPSPWKAPSRSRSRSRSRSRPRSRSRSWSRPRSPSRGRSRSRSRGREHA 60
           M+   R RYS S SP+    + R RS SRS  RS +RS S                   A
Sbjct: 31  MSYSRRSRYSPSLSPY---DKRRGRSVSRSLSRSPTRSVS-----------------SDA 90

Query: 61  NNPGNTLYVTGLSTRVTERDLEEHFSKEGKVASCFLVVEPRTRISRGFAFVTMDNVDDAN 120
            NPGN+LYVTGLS RVTERDLE+HF+KEGKV    LV++P TR SRGF F++M +V DAN
Sbjct: 91  ENPGNSLYVTGLSHRVTERDLEDHFAKEGKVTDVHLVLDPWTRESRGFGFISMKSVGDAN 150

Query: 121 RCVKHLNQSILEGRYITVEKSRRKRPRTPTPGHYLGLKSTRDSGYRGGDRGSSRYRGGGG 180
           RC++ L+ S+L+GR ITVEK+RR+R RTPTPG YLGL++ R            R++    
Sbjct: 151 RCIRSLDHSVLQGRVITVEKARRRRGRTPTPGKYLGLRTAR-----------GRHKSPSY 210

Query: 181 SFREDYGYRRSPRRSPYRGAREYSPRHSPPYGGGRSRRDHSRSPPP-------YSPPYGG 240
           S R      RS  RS Y   R  S  +SP YG    RR  S S  P       YSP    
Sbjct: 211 SPRRSVSCSRSRSRS-YSSDRGRS--YSPSYG----RRGRSSSYSPFYRRRRFYSPSRSP 240

Query: 241 SPDRRYPR 242
           SPD RY R
Sbjct: 271 SPDDRYNR 240

[Close]
BLAST of CSPI06G32180 vs. TAIR10
Match: AT2G21440.1 (AT2G21440.1 RNA-binding (RRM/RBD/RNP motifs) family protein)

HSP 1 Score: 62.4 bits (150), Expect = 4.5e-10
Identity = 36/94 (38.30%), Postives = 51/94 (54.26%), Query Frame = 1 

Query: 51  RSRSRGREHANNPGNTLYVTGLSTRVTERDLEEHFSKEGKVASCFLVVEPRTRISRGFAF 110
           R R  G E + +   T+ V+GL   +T   LEE FS+ G V  CFLV    +   RGFAF
Sbjct: 6   RERKDGEEKSPHAAATVCVSGLPYSITNAQLEEAFSEVGPVRRCFLVTNKGSDEHRGFAF 65

Query: 111 VTMDNVDDANRCVKHLNQSILEGRYITVEKSRRK 145
           V     +D NR ++  N S + GR ITV+++  +
Sbjct: 66  VKFALQEDVNRAIELKNGSTVGGRRITVKQAAHR 99

[Close]
BLAST of CSPI06G32180 vs. TAIR10
Match: AT1G60650.1 (AT1G60650.1 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain)

HSP 1 Score: 59.3 bits (142), Expect = 3.8e-09
Identity = 32/90 (35.56%), Postives = 50/90 (55.56%), Query Frame = 1 

Query: 55  RGREHANNPGNTLYVTGLSTRVTERDLEEHFSKEGKVASCFLVVEPRTRISRGFAFVTMD 114
           + RE+  N  + ++V GLS  VTER LE  F + GK+  C ++V   T   RGF F+T  
Sbjct: 2   KDRENDGNLESRIFVGGLSWDVTERQLESTFDRYGKITECQIMVGRDTGRPRGFGFITFT 61

Query: 115 NVDDANRCVKHLNQSILEGRYITVEKSRRK 145
           +   A+  +KH++   L  + I+V K+  K
Sbjct: 62  DRRGADDAIKHMHGRELGNKVISVNKAEPK 91

[Close]
BLAST of CSPI06G32180 vs. TAIR10
Match: AT4G24770.1 (AT4G24770.1 31-kDa RNA binding protein)

HSP 1 Score: 58.9 bits (141), Expect = 5.0e-09
Identity = 36/96 (37.50%), Postives = 47/96 (48.96%), Query Frame = 1 

Query: 52  SRSRGREHANNPGNTLYVTGLSTRVTERDLEEHFSKEGKVASCFLVVEPRTRISRGFAFV 111
           SR         P   +YV  L   V    LE+ FS+ GKV    +V +  T  SRGF FV
Sbjct: 231 SRPERAPRVYEPAFRVYVGNLPWDVDNGRLEQLFSEHGKVVEARVVYDRETGRSRGFGFV 290

Query: 112 TMDNVDDANRCVKHLNQSILEGRYITVEKSRRKRPR 148
           TM +VD+ N  +  L+   LEGR I V  +  + PR
Sbjct: 291 TMSDVDELNEAISALDGQNLEGRAIRVNVAEERPPR 326

[Close]
BLAST of CSPI06G32180 vs. NCBI nr
Match: gi|700193757|gb|KGN48961.1| (hypothetical protein Csa_6G507340 [Cucumis sativus])

HSP 1 Score: 473.4 bits (1217), Expect = 2.4e-130
Identity = 244/244 (100.00%), Postives = 244/244 (100.00%), Query Frame = 1 

Query: 1   MADVHRKRYSRSPSPWKAPSRSRSRSRSRSRPRSRSRSWSRPRSPSRGRSRSRSRGREHA 60
           MADVHRKRYSRSPSPWKAPSRSRSRSRSRSRPRSRSRSWSRPRSPSRGRSRSRSRGREHA
Sbjct: 1   MADVHRKRYSRSPSPWKAPSRSRSRSRSRSRPRSRSRSWSRPRSPSRGRSRSRSRGREHA 60

Query: 61  NNPGNTLYVTGLSTRVTERDLEEHFSKEGKVASCFLVVEPRTRISRGFAFVTMDNVDDAN 120
           NNPGNTLYVTGLSTRVTERDLEEHFSKEGKVASCFLVVEPRTRISRGFAFVTMDNVDDAN
Sbjct: 61  NNPGNTLYVTGLSTRVTERDLEEHFSKEGKVASCFLVVEPRTRISRGFAFVTMDNVDDAN 120

Query: 121 RCVKHLNQSILEGRYITVEKSRRKRPRTPTPGHYLGLKSTRDSGYRGGDRGSSRYRGGGG 180
           RCVKHLNQSILEGRYITVEKSRRKRPRTPTPGHYLGLKSTRDSGYRGGDRGSSRYRGGGG
Sbjct: 121 RCVKHLNQSILEGRYITVEKSRRKRPRTPTPGHYLGLKSTRDSGYRGGDRGSSRYRGGGG 180

Query: 181 SFREDYGYRRSPRRSPYRGAREYSPRHSPPYGGGRSRRDHSRSPPPYSPPYGGSPDRRYP 240
           SFREDYGYRRSPRRSPYRGAREYSPRHSPPYGGGRSRRDHSRSPPPYSPPYGGSPDRRYP
Sbjct: 181 SFREDYGYRRSPRRSPYRGAREYSPRHSPPYGGGRSRRDHSRSPPPYSPPYGGSPDRRYP 240

Query: 241 RGSR 245
           RGSR
Sbjct: 241 RGSR 244

[Close]
BLAST of CSPI06G32180 vs. NCBI nr
Match: gi|778722503|ref|XP_011658501.1| (PREDICTED: ankyrin repeat domain-containing protein, chloroplastic [Cucumis sativus])

HSP 1 Score: 473.4 bits (1217), Expect = 2.4e-130
Identity = 244/244 (100.00%), Postives = 244/244 (100.00%), Query Frame = 1 

Query: 1   MADVHRKRYSRSPSPWKAPSRSRSRSRSRSRPRSRSRSWSRPRSPSRGRSRSRSRGREHA 60
           MADVHRKRYSRSPSPWKAPSRSRSRSRSRSRPRSRSRSWSRPRSPSRGRSRSRSRGREHA
Sbjct: 1   MADVHRKRYSRSPSPWKAPSRSRSRSRSRSRPRSRSRSWSRPRSPSRGRSRSRSRGREHA 60

Query: 61  NNPGNTLYVTGLSTRVTERDLEEHFSKEGKVASCFLVVEPRTRISRGFAFVTMDNVDDAN 120
           NNPGNTLYVTGLSTRVTERDLEEHFSKEGKVASCFLVVEPRTRISRGFAFVTMDNVDDAN
Sbjct: 61  NNPGNTLYVTGLSTRVTERDLEEHFSKEGKVASCFLVVEPRTRISRGFAFVTMDNVDDAN 120

Query: 121 RCVKHLNQSILEGRYITVEKSRRKRPRTPTPGHYLGLKSTRDSGYRGGDRGSSRYRGGGG 180
           RCVKHLNQSILEGRYITVEKSRRKRPRTPTPGHYLGLKSTRDSGYRGGDRGSSRYRGGGG
Sbjct: 121 RCVKHLNQSILEGRYITVEKSRRKRPRTPTPGHYLGLKSTRDSGYRGGDRGSSRYRGGGG 180

Query: 181 SFREDYGYRRSPRRSPYRGAREYSPRHSPPYGGGRSRRDHSRSPPPYSPPYGGSPDRRYP 240
           SFREDYGYRRSPRRSPYRGAREYSPRHSPPYGGGRSRRDHSRSPPPYSPPYGGSPDRRYP
Sbjct: 181 SFREDYGYRRSPRRSPYRGAREYSPRHSPPYGGGRSRRDHSRSPPPYSPPYGGSPDRRYP 240

Query: 241 RGSR 245
           RGSR
Sbjct: 241 RGSR 244

[Close]
BLAST of CSPI06G32180 vs. NCBI nr
Match: gi|659080604|ref|XP_008440881.1| (PREDICTED: LOW QUALITY PROTEIN: ankyrin repeat domain-containing protein, chloroplastic [Cucumis melo])

HSP 1 Score: 411.8 bits (1057), Expect = 8.6e-112
Identity = 223/244 (91.39%), Postives = 227/244 (93.03%), Query Frame = 1 

Query: 1   MADVHRKRYSRSPSPWKAPSRSRSRSRSRSRPRSRSRSWSRPRSPSRGRSRSRSRGREHA 60
           MADVHRKRYSRSPSPW+APSRSRSRSRSRSRPRSRSRSWSRPRSPSRGRSRSRSRGR+HA
Sbjct: 1   MADVHRKRYSRSPSPWRAPSRSRSRSRSRSRPRSRSRSWSRPRSPSRGRSRSRSRGRDHA 60

Query: 61  NNPGNTLYVTGLSTRVTERDLEEHFSKEGKVASCFLVVEPRTRISRGFAFVTMDNVDDAN 120
           NNPGNTLYVTGLSTRVTERDLE+HFSKEGKVASCFLVVEPRTRISRGFAFVTMDNVDDAN
Sbjct: 61  NNPGNTLYVTGLSTRVTERDLEDHFSKEGKVASCFLVVEPRTRISRGFAFVTMDNVDDAN 120

Query: 121 RCVKHLNQSILEGRYITVEKSRRKRPRTPTPGHYLGLKSTRDSGYRGGDRGSSRYRGGGG 180
           RCVKHLNQS+LEGRYITVEKSRRKRPRTPTPGHYLGLKSTRDSGYR GDRG SRYR GGG
Sbjct: 121 RCVKHLNQSVLEGRYITVEKSRRKRPRTPTPGHYLGLKSTRDSGYR-GDRG-SRYR-GGG 180

Query: 181 SFREDYGYRRSPRRSPYRGAREYSPRHSPPYGGGRSRRDHSRSPPPYSPPYGGSPDRRYP 240
           SFREDYGYRRSPRRSPYRGAREYSPRHSPPYGGGRSRRDHSRSP              YP
Sbjct: 181 SFREDYGYRRSPRRSPYRGAREYSPRHSPPYGGGRSRRDHSRSP--------------YP 227

Query: 241 RGSR 245
           RGSR
Sbjct: 241 RGSR 227

[Close]
BLAST of CSPI06G32180 vs. NCBI nr
Match: gi|1009180861|ref|XP_015871854.1| (PREDICTED: serine/arginine-rich splicing factor SR45a [Ziziphus jujuba])

HSP 1 Score: 338.2 bits (866), Expect = 1.2e-89
Identity = 195/248 (78.63%), Postives = 209/248 (84.27%), Query Frame = 1 

Query: 1   MADVHRKRYSRSPSPWKAPSRSRSRSRSRSRPRSRSRSWSRPR----SPSRGRSRSRSRG 60
           MA+  RKRYSRS SPW+A SRSRSRSRSRSRPRSRSRSWSRPR    S SRGRSRSRS G
Sbjct: 1   MAESPRKRYSRSASPWRAQSRSRSRSRSRSRPRSRSRSWSRPRPRSRSRSRGRSRSRSHG 60

Query: 61  REHANNPGNTLYVTGLSTRVTERDLEEHFSKEGKVASCFLVVEPRTRISRGFAFVTMDNV 120
           R    NPGNTLYVTGLSTRVTERDLE+HF+KEGKVASCFLVVEPRTRISRGFAFVTMD+V
Sbjct: 61  RGEDLNPGNTLYVTGLSTRVTERDLEDHFNKEGKVASCFLVVEPRTRISRGFAFVTMDSV 120

Query: 121 DDANRCVKHLNQSILEGRYITVEKSRRKRPRTPTPGHYLGLKSTRDSGYRGGDRGSSRYR 180
           +DA RC+K+LNQS+LEGRYITVE+SRRKRPRTPTPGHYLGLKSTRD GYR GDR   RYR
Sbjct: 121 EDAERCIKYLNQSVLEGRYITVERSRRKRPRTPTPGHYLGLKSTRDYGYR-GDRDRGRYR 180

Query: 181 GGGGSFREDYGYRRSPRRSPYRGAREYSPRHSPPYGGGRSRRDHSRSPPPYSPPYGGSPD 240
           GG G  R+DYGYRRSPRRSPYRG R+YSP       GGRSRRD SRS  P   PY GSP+
Sbjct: 181 GGSG--RDDYGYRRSPRRSPYRGGRDYSPH------GGRSRRDRSRS--PLHSPY-GSPE 236

Query: 241 RRYPRGSR 245
           R+Y RGSR
Sbjct: 241 RKYVRGSR 236

[Close]
BLAST of CSPI06G32180 vs. NCBI nr
Match: gi|1021515888|ref|XP_016201417.1| (PREDICTED: LOW QUALITY PROTEIN: ankyrin repeat domain-containing protein, chloroplastic-like [Arachis ipaensis])

HSP 1 Score: 337.8 bits (865), Expect = 1.6e-89
Identity = 193/249 (77.51%), Postives = 207/249 (83.13%), Query Frame = 1 

Query: 1   MADVHRKRYSRSPSPWKAPSRSRSRSRSRSRPRSRSRSWSRPRSPSRGRSRSRSRGREH- 60
           MAD   +R SRSPSPW+A SRSRSRSRSR R RSRSRS  R R  SR RSR RSR R H 
Sbjct: 1   MADSPVRRNSRSPSPWRAQSRSRSRSRSRPRSRSRSRSIPRQRPRSRSRSRGRSRSRSHE 60

Query: 61  ----ANNPGNTLYVTGLSTRVTERDLEEHFSKEGKVASCFLVVEPRTRISRGFAFVTMDN 120
                 NPGNTLYVTGLS+RVTERDLEEHFSKEGKVASCFLVVEPRTRISRGFAF+TMD+
Sbjct: 61  RVGETQNPGNTLYVTGLSSRVTERDLEEHFSKEGKVASCFLVVEPRTRISRGFAFITMDS 120

Query: 121 VDDANRCVKHLNQSILEGRYITVEKSRRKRPRTPTPGHYLGLKSTRDSGYRGGDRGSSRY 180
           V+DANRC+K+LNQS+LEGRYITVE+SRRKRPRTPTPGHYLGLKSTRD G+RGGDRG  R 
Sbjct: 121 VEDANRCIKYLNQSVLEGRYITVERSRRKRPRTPTPGHYLGLKSTRDYGHRGGDRGGDRG 180

Query: 181 RGGGGSFREDYGYRRSPRRSPYRGAREYSPRHSPPYGGGRSRRDHSRSPPPYSPPYGGSP 240
           R  GG  R+DY YRRSPRRSPYRG R+YSPR SP  GGGRSRR+ SRS PPYSP   GSP
Sbjct: 181 RYRGGPGRDDYQYRRSPRRSPYRGGRDYSPRRSPYGGGGRSRRERSRS-PPYSP--YGSP 240

Query: 241 DRRYPRGSR 245
           DRRY RGSR
Sbjct: 241 DRRYARGSR 246

The following BLAST results are available for this feature:
BLAST of CSPI06G32180 vs. Swiss-Prot
Match NameE-valueIdentityDescription
SR45A_ARATH5.5e-3446.37Serine/arginine-rich splicing factor SR45a OS=Arabidopsis thaliana GN=SR45A PE=1... [more]
TRA2B_RAT1.8e-2143.20Transformer-2 protein homolog beta OS=Rattus norvegicus GN=Tra2b PE=1 SV=1[more]
TRA2B_MOUSE1.8e-2143.20Transformer-2 protein homolog beta OS=Mus musculus GN=Tra2b PE=1 SV=1[more]
TRA2B_HUMAN1.8e-2143.20Transformer-2 protein homolog beta OS=Homo sapiens GN=TRA2B PE=1 SV=1[more]
TRA2B_BOVIN1.8e-2143.20Transformer-2 protein homolog beta OS=Bos taurus GN=TRA2B PE=2 SV=1[more]
BLAST of CSPI06G32180 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KMM4_CUCSA1.7e-130100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_6G507340 PE=4 SV=1[more]
M5VQZ0_PRUPE1.5e-8676.10Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010685mg PE=4 SV=1[more]
A0A0S3T4D2_PHAAN2.5e-8678.40Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.10G147500 PE=... [more]
V4RV28_9ROSI1.1e-8477.20Uncharacterized protein OS=Citrus clementina GN=CICLE_v10026375mg PE=4 SV=1[more]
A0A067G739_CITSI1.1e-8477.20Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g026421mg PE=4 SV=1[more]
BLAST of CSPI06G32180 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G35785.54.0e-4367.90 RNA-binding (RRM/RBD/RNP motifs) family protein[more]
AT1G07350.13.1e-3546.37 RNA-binding (RRM/RBD/RNP motifs) family protein[more]
AT2G21440.14.5e-1038.30 RNA-binding (RRM/RBD/RNP motifs) family protein[more]
AT1G60650.13.8e-0935.56 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc... [more]
AT4G24770.15.0e-0937.50 31-kDa RNA binding protein[more]
BLAST of CSPI06G32180 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700193757|gb|KGN48961.1|2.4e-130100.00hypothetical protein Csa_6G507340 [Cucumis sativus][more]
gi|778722503|ref|XP_011658501.1|2.4e-130100.00PREDICTED: ankyrin repeat domain-containing protein, chloroplastic [Cucumis sati... [more]
gi|659080604|ref|XP_008440881.1|8.6e-11291.39PREDICTED: LOW QUALITY PROTEIN: ankyrin repeat domain-containing protein, chloro... [more]
gi|1009180861|ref|XP_015871854.1|1.2e-8978.63PREDICTED: serine/arginine-rich splicing factor SR45a [Ziziphus jujuba][more]
gi|1021515888|ref|XP_016201417.1|1.6e-8977.51PREDICTED: LOW QUALITY PROTEIN: ankyrin repeat domain-containing protein, chloro... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR000504RRM_dom
IPR012677Nucleotide-bd_a/b_plait_sf
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO:0000166nucleotide binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
cellular_component GO:0030529 intracellular ribonucleoprotein complex
cellular_component GO:0019013 viral nucleocapsid
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0000166 nucleotide binding
molecular_function GO:0005515 protein binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI06G32180.1CSPI06G32180.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 67..136
score: 2.8
IPR000504RNA recognition motif domainSMARTSM00360rrm1_1coord: 66..139
score: 5.8
IPR000504RNA recognition motif domainPROFILEPS50102RRMcoord: 65..143
score: 17
IPR012677Nucleotide-binding alpha-beta plait domainGENE3DG3DSA:3.30.70.330coord: 43..153
score: 1.3
IPR012677Nucleotide-binding alpha-beta plait domainunknownSSF54928RNA-binding domain, RBDcoord: 13..141
score: 4.61
NoneNo IPR availablePANTHERPTHR15241TRANSFORMER-2-RELATEDcoord: 1..241
score: 7.6

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CSPI06G32180Cla014324Watermelon (97103) v1cpiwmB519
CSPI06G32180Csa6G507340Cucumber (Chinese Long) v2cpicuB313
CSPI06G32180MELO3C007946Melon (DHL92) v3.5.1cpimeB508
CSPI06G32180ClCG01G020630Watermelon (Charleston Gray)cpiwcgB453
CSPI06G32180Lsi01G005620Bottle gourd (USVL1VR-Ls)cpilsiB439
CSPI06G32180MELO3C007946.2Melon (DHL92) v3.6.1cpimedB493
CSPI06G32180CsaV3_6G047540Cucumber (Chinese Long) v3cpicucB363
CSPI06G32180Cla97C01G020130Watermelon (97103) v2cpiwmbB433
CSPI06G32180Bhi03G000596Wax gourdcpiwgoB634
CSPI06G32180Cucsa.043980Cucumber (Gy14) v1cgycpiB028
CSPI06G32180CmaCh03G006500Cucurbita maxima (Rimu)cmacpiB689
CSPI06G32180CmoCh07G003960Cucurbita moschata (Rifu)cmocpiB873
CSPI06G32180Cp4.1LG19g08600Cucurbita pepo (Zucchini)cpecpiB503
CSPI06G32180Cp4.1LG10g10600Cucurbita pepo (Zucchini)cpecpiB080
CSPI06G32180Carg00560Silver-seed gourdcarcpiB0446
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CSPI06G32180Wild cucumber (PI 183967)cpicpiB133
CSPI06G32180Cucumber (Gy14) v1cgycpiB488
CSPI06G32180Cucurbita maxima (Rimu)cmacpiB893
CSPI06G32180Cucurbita moschata (Rifu)cmocpiB681
CSPI06G32180Cucumber (Chinese Long) v2cpicuB292
CSPI06G32180Melon (DHL92) v3.5.1cpimeB497
CSPI06G32180Watermelon (Charleston Gray)cpiwcgB446
CSPI06G32180Watermelon (97103) v1cpiwmB465
CSPI06G32180Cucurbita pepo (Zucchini)cpecpiB230
CSPI06G32180Cucurbita pepo (Zucchini)cpecpiB288
CSPI06G32180Bottle gourd (USVL1VR-Ls)cpilsiB476
CSPI06G32180Melon (DHL92) v3.6.1cpimedB485
CSPI06G32180Cucumber (Gy14) v2cgybcpiB147
CSPI06G32180Cucumber (Gy14) v2cgybcpiB287
CSPI06G32180Silver-seed gourdcarcpiB0383
CSPI06G32180Silver-seed gourdcarcpiB0672
CSPI06G32180Cucumber (Chinese Long) v3cpicucB342
CSPI06G32180Watermelon (97103) v2cpiwmbB444
CSPI06G32180Wax gourdcpiwgoB535