CSPI06G30470 (gene) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GGGGCCACAACCAAAACACAACCCTTTTTCCTTTAGTTTTAAAATGTAACCCAGATGGCTATATAATGAGCTCTGTTTCCTTTCATATAACCATCTCAAAACCAGAGAAAGCAGCCTTTGTTTCTAATGCCCTTTTCTTTGCTTGTTTGCTTGAAGAGAAGGTAAAGACTAAAGAGAAAGATCCATCATTCTACCCAAACTTACGTTTCCATTTCTTTCTACAACTCTGGTTTTTGCTTCTGTGAGCTTCTGTTGTCCCTTTCCCTTTTCAACTACATCGATTAAAGAGTGAAAAATGGGTGTTGGTGGGACTTTGGAGTACTTGTCAGATTTGGTGGGTAACACCCATAAACACAAGAAGAAGAAACAGCTTCAAACCGTGGAGTTGAAAGTCAGAATGGACTGTGATGGCTGTGAACTTAAGGTCAAGAATGCCCTCTCTTCACTCAGTGGTATGTTATGTCTAAAGAAACTCACCCCTTTTGTGTTTTTACTTCTTCCTTTTCTCTCTATCTAACAAAATGCAGTTGCTTTTGAACTTTGGAAGGGGTAAAATCTGTGGAGATAAACAGGAAGCAGCAGAAAGTGACAGTTACGGGGTATGTTGAAGCAAGCAAGATACTGAAGAAGGCGAAGTCTACAGGGAAAAAGGCTGAGATATGGCCATATGTTCCCTACAGCTTAGTGTCACAGCCTTACATTGCTCAGGCTTATGATAAGAAGGCACCACCGGGGTATGTAAGAAATGTGGAGCAAACTGCCACTACTGCTTCTGTTACCAAATATGAAGATCCTTACATCAACATGTTCAGTGATGACAACCCAAATGCTTGCTCTATCATGTAATTCTTTGCAGCTAAAACAAGTCTCCTGTTTTGTACCTCTCTCTATATATCTCTCTTCTGCTAAATTTTTGTCAAACACCTCAATAATTATGGTAATGATATATATTACTGTGTGTTCAATCATTTGTGAAGAAGAAATGGTCAACTAGATGGATGAGTAATTAGAATATTTGGGGTTGTTAGTTGTTACTAGCTGATGTAAGAGATTACTTTATTTCATGATGTTGTAATTTCCTGTTTGTGAGACGACTTTGGCTTCCCC ATGGGTGTTGGTGGGACTTTGGAGTACTTGTCAGATTTGGTGGGTAACACCCATAAACACAAGAAGAAGAAACAGCTTCAAACCGTGGAGTTGAAAGTCAGAATGGACTGTGATGGCTGTGAACTTAAGGTCAAGAATGCCCTCTCTTCACTCAGTGGGGTAAAATCTGTGGAGATAAACAGGAAGCAGCAGAAAGTGACAGTTACGGGGTATGTTGAAGCAAGCAAGATACTGAAGAAGGCGAAGTCTACAGGGAAAAAGGCTGAGATATGGCCATATGTTCCCTACAGCTTAGTGTCACAGCCTTACATTGCTCAGGCTTATGATAAGAAGGCACCACCGGGGTATGTAAGAAATGTGGAGCAAACTGCCACTACTGCTTCTGTTACCAAATATGAAGATCCTTACATCAACATGTTCAGTGATGACAACCCAAATGCTTGCTCTATCATGTAA ATGGGTGTTGGTGGGACTTTGGAGTACTTGTCAGATTTGGTGGGTAACACCCATAAACACAAGAAGAAGAAACAGCTTCAAACCGTGGAGTTGAAAGTCAGAATGGACTGTGATGGCTGTGAACTTAAGGTCAAGAATGCCCTCTCTTCACTCAGTGGGGTAAAATCTGTGGAGATAAACAGGAAGCAGCAGAAAGTGACAGTTACGGGGTATGTTGAAGCAAGCAAGATACTGAAGAAGGCGAAGTCTACAGGGAAAAAGGCTGAGATATGGCCATATGTTCCCTACAGCTTAGTGTCACAGCCTTACATTGCTCAGGCTTATGATAAGAAGGCACCACCGGGGTATGTAAGAAATGTGGAGCAAACTGCCACTACTGCTTCTGTTACCAAATATGAAGATCCTTACATCAACATGTTCAGTGATGACAACCCAAATGCTTGCTCTATCATGTAA
BLAST of CSPI06G30470 vs. Swiss-Prot
Match: HIP20_ARATH (Heavy metal-associated isoprenylated plant protein 20 OS=Arabidopsis thaliana GN=HIPP20 PE=2 SV=1) HSP 1 Score: 182.2 bits (461), Expect = 4.3e-45 Identity = 86/144 (59.72%), Postives = 110/144 (76.39%), Query Frame = 1
BLAST of CSPI06G30470 vs. Swiss-Prot
Match: HIP22_ARATH (Heavy metal-associated isoprenylated plant protein 22 OS=Arabidopsis thaliana GN=HIPP22 PE=2 SV=1) HSP 1 Score: 174.1 bits (440), Expect = 1.2e-42 Identity = 85/153 (55.56%), Postives = 112/153 (73.20%), Query Frame = 1
BLAST of CSPI06G30470 vs. Swiss-Prot
Match: HIP21_ARATH (Heavy metal-associated isoprenylated plant protein 21 OS=Arabidopsis thaliana GN=HIPP21 PE=2 SV=1) HSP 1 Score: 156.0 bits (393), Expect = 3.3e-37 Identity = 75/150 (50.00%), Postives = 108/150 (72.00%), Query Frame = 1
BLAST of CSPI06G30470 vs. Swiss-Prot
Match: HIP26_ARATH (Heavy metal-associated isoprenylated plant protein 26 OS=Arabidopsis thaliana GN=HIPP26 PE=1 SV=1) HSP 1 Score: 149.8 bits (377), Expect = 2.4e-35 Identity = 74/152 (48.68%), Postives = 103/152 (67.76%), Query Frame = 1
BLAST of CSPI06G30470 vs. Swiss-Prot
Match: HIP27_ARATH (Heavy metal-associated isoprenylated plant protein 27 OS=Arabidopsis thaliana GN=HIPP27 PE=1 SV=1) HSP 1 Score: 148.7 bits (374), Expect = 5.3e-35 Identity = 72/136 (52.94%), Postives = 94/136 (69.12%), Query Frame = 1
BLAST of CSPI06G30470 vs. TrEMBL
Match: A0A0A0KIY2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G500660 PE=4 SV=1) HSP 1 Score: 303.1 bits (775), Expect = 1.9e-79 Identity = 150/151 (99.34%), Postives = 151/151 (100.00%), Query Frame = 1
BLAST of CSPI06G30470 vs. TrEMBL
Match: B9SSL2_RICCO (Metal ion binding protein, putative OS=Ricinus communis GN=RCOM_0985130 PE=4 SV=1) HSP 1 Score: 266.2 bits (679), Expect = 2.5e-68 Identity = 131/153 (85.62%), Postives = 146/153 (95.42%), Query Frame = 1
BLAST of CSPI06G30470 vs. TrEMBL
Match: M5W0M5_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012771mg PE=4 SV=1) HSP 1 Score: 265.0 bits (676), Expect = 5.6e-68 Identity = 132/155 (85.16%), Postives = 145/155 (93.55%), Query Frame = 1
BLAST of CSPI06G30470 vs. TrEMBL
Match: B9H568_POPTR (Heavy-metal-associated domain-containing family protein OS=Populus trichocarpa GN=POPTR_0005s08160g PE=4 SV=1) HSP 1 Score: 260.8 bits (665), Expect = 1.1e-66 Identity = 129/153 (84.31%), Postives = 141/153 (92.16%), Query Frame = 1
BLAST of CSPI06G30470 vs. TrEMBL
Match: V4S1Z4_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10026695mg PE=4 SV=1) HSP 1 Score: 260.4 bits (664), Expect = 1.4e-66 Identity = 131/153 (85.62%), Postives = 144/153 (94.12%), Query Frame = 1
BLAST of CSPI06G30470 vs. TAIR10
Match: AT4G39700.1 (AT4G39700.1 Heavy metal transport/detoxification superfamily protein ) HSP 1 Score: 235.3 bits (599), Expect = 2.4e-62 Identity = 117/158 (74.05%), Postives = 136/158 (86.08%), Query Frame = 1
BLAST of CSPI06G30470 vs. TAIR10
Match: AT4G08570.1 (AT4G08570.1 Heavy metal transport/detoxification superfamily protein ) HSP 1 Score: 183.7 bits (465), Expect = 8.3e-47 Identity = 91/152 (59.87%), Postives = 119/152 (78.29%), Query Frame = 1
BLAST of CSPI06G30470 vs. TAIR10
Match: AT1G71050.1 (AT1G71050.1 Heavy metal transport/detoxification superfamily protein ) HSP 1 Score: 182.2 bits (461), Expect = 2.4e-46 Identity = 86/144 (59.72%), Postives = 110/144 (76.39%), Query Frame = 1
BLAST of CSPI06G30470 vs. TAIR10
Match: AT1G22990.1 (AT1G22990.1 Heavy metal transport/detoxification superfamily protein ) HSP 1 Score: 174.1 bits (440), Expect = 6.6e-44 Identity = 85/153 (55.56%), Postives = 112/153 (73.20%), Query Frame = 1
BLAST of CSPI06G30470 vs. TAIR10
Match: AT5G17450.1 (AT5G17450.1 Heavy metal transport/detoxification superfamily protein ) HSP 1 Score: 156.0 bits (393), Expect = 1.9e-38 Identity = 75/150 (50.00%), Postives = 108/150 (72.00%), Query Frame = 1
BLAST of CSPI06G30470 vs. NCBI nr
Match: gi|449451469|ref|XP_004143484.1| (PREDICTED: heavy metal-associated isoprenylated plant protein 26 [Cucumis sativus]) HSP 1 Score: 303.1 bits (775), Expect = 2.7e-79 Identity = 150/151 (99.34%), Postives = 151/151 (100.00%), Query Frame = 1
BLAST of CSPI06G30470 vs. NCBI nr
Match: gi|659080140|ref|XP_008440632.1| (PREDICTED: heavy metal-associated isoprenylated plant protein 26 [Cucumis melo]) HSP 1 Score: 303.1 bits (775), Expect = 2.7e-79 Identity = 150/151 (99.34%), Postives = 151/151 (100.00%), Query Frame = 1
BLAST of CSPI06G30470 vs. NCBI nr
Match: gi|1009146444|ref|XP_015890885.1| (PREDICTED: heavy metal-associated isoprenylated plant protein 26 [Ziziphus jujuba]) HSP 1 Score: 273.1 bits (697), Expect = 3.0e-70 Identity = 133/151 (88.08%), Postives = 144/151 (95.36%), Query Frame = 1
BLAST of CSPI06G30470 vs. NCBI nr
Match: gi|645218863|ref|XP_008232814.1| (PREDICTED: heavy metal-associated isoprenylated plant protein 26-like [Prunus mume]) HSP 1 Score: 266.9 bits (681), Expect = 2.1e-68 Identity = 133/155 (85.81%), Postives = 145/155 (93.55%), Query Frame = 1
BLAST of CSPI06G30470 vs. NCBI nr
Match: gi|255576174|ref|XP_002528981.1| (PREDICTED: heavy metal-associated isoprenylated plant protein 26 [Ricinus communis]) HSP 1 Score: 266.2 bits (679), Expect = 3.6e-68 Identity = 131/153 (85.62%), Postives = 146/153 (95.42%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: None |