CSPI06G29540 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI06G29540
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionProtein BRICK 1
LocationChr6 : 25632394 .. 25638066 (-)
Genome Viewer
Gene Expression
   



Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAAAAGAGAAGGAATTCAGAAAAAGAAAGAAAAAAGAAAATTCAATTCGAGTTTTGATGGGAGAGAGAGATTCGTGGTGTGCACATAACATAGTTTGGTGAAAATGGTAACCACAATAAACTCGCTTTCGGGTGGTGGTTTGTTTATGGTTATGCTATAATTGAAATTGAGAGCTCAACCCTTGCCTTCTCCTTCAACACCAATTTCAACCCATCTTCTTATCTCAGTTCGCGCCATACAGAAAGATCTCTTTCTCATGGCTAGAGCTGGCGGAATTACTAACGCTGTAAACGTAGGGATAGCGGTTCAAGCTGATTGGGAAAATCGCGAATTCATCTCTCATATTTCCATCAATGTCCGTCGTCTCTTTGATTTCCTCGTCCATTTCGGTACTCATCCCCTTTTCTCGCTCTCTCTCCTCGATTCTTAGATCTCTTCTATTATTAGAAATTTCCTCACTTGTTATAATTAGTTACCTTTTTCAATCCAAACTTTTAATATTTTCTTTATAAACTTGATAATTGAATCCCATCTCTTATTCTGGATTTATATCATTATTTTATCTTCTGGGATTTGATTAGCCGAGCACCATTTGCCCTATGATTTTTCAATCTCCGGCGATAGTTTTTCAGTAAGATTTTTTTTTTTTTTCAATTTTGAAGTCAGTATTGCTGTATATTTTACTTGGTCGGTTACTAATCATAGCAATATTCGGGTTTCTAATTCATGTCCTTGTTTCATTAGAGGCAACAACAAAGAGCAAGTTGGCATCTTTGAACGAGAAACTTGATACCCTGGAGAGGCGGCTTGAAATGCTTGAAGTCCAAGTCAGTACTGCATCTGCTAACTCATCTCTTTTTACCACTTAATGTTTACTTTACCTTGTATAAAAAGACATAGCTCCCTGTTATAGTTTTTGTCTTGTTTTCACTAGTGTAAACGAAATATGAGGATCTTGTGTAATGATTATGTGTACACATTGATGTTTAAAATCATATCTGTCTAGTGCTTTTATACTGATCTACTTGAATTCTAATTCATGTTGTGTGCTTCAAGGAATATGCACAATTAGGAATTTAGGATCATTTTTGTTTCCTTGACTCAACTAGCAAGTTGTTAAATCACACGAGTCTTTGGCGAAGGTTGTTGAAAATACCCCTGAAAGTTCTTTGGGTTATCTTGTCTTAAATTACCTCCACTCTTCATCAGTCCGTCCACCATAGCATCTCAAATTTGATCAAATAATTGTTTTAGCCTTTCCTATTGCATTTTCCTTGGCTAATTGATTGATCAAATAGTTGCTCTTAGCCTTTTTCTTAGGCCCTTAATATTATTCCTGGGTTCTCTATATATTTGATTCGTTGAAATATGCAAAACATAGCAAATGTTATTTTGTTGTCTTTGAACTTTTGGCGGATGCTCCAAACTCTTAGTAATCATAAATGAGCAGCTGTGACACGGGTGAAGACTCCACCAAGCTAATGTAGATACTAACCGGTAGGCCATGAAAAGGTAAACCTGAGGCATGATATTTGGCAAATAAGTGACTTCTATGCAAAATACCAATGAAGAAGTTCCTCAGAATTTAGTTTTTTTCAAATATTTGATCATCTCCAATGTTGAAATTGATTTGTTTGCATGCTTTATTATAGGATTTGATTTTTCGATAGCAATGCATTTAATTCATCCAAAATTAAGTTAAGAGAACTGAAAACCAGGATGAAAGAGAGGATGAACGAACGGGACCTAAAGAGGAACGTGAGCTGCCACGAATTATTATTCTGAGAGCGAATTTAGAATTGGAATATGGATATGCAGGTGACCCTGCATCATTTGAGAATGAATCTCCTAGGATATTATGGCTATGGACATAGTTTATTATAGCTCTTGAATTTGTTTTGTCCAAATTCAAAAACTTCGTTGCTGTTATTTTAACTTCGGTTTCTCCCAGGAAATTGAAAGTCATTTTTTACTGCAGTTTCACTGACGTAAGTAGAACTTGGTTTTCCAATACAAGAAAAAAAGAAGGAAAATGAAAGCAAATTTCACTCTGAATTAAATCAGCAATCTAATATAAGAACAAATGTATGAGCATATCCTTGGTTCTTCACTTCCTCTGGTTCTTGGATGCAAAACGAAGAATTAGGTAGAATAGTATCCTATAAAGCACGGCCCAAGCAAACATCACAGCCACATTTTCCCACTTTTTATCTGAATCGGTACTGATGTGAAGACTTTCCAATATGTTGATACCAGAAATATCAGTTCCATTTGATTGCTTCCCGAATGGAATGGAAGTTTGATACTCATTCATCAGCAGCCCTTCATATGGATATGTCATCGTGGAAATCTTGTTCATCCACTTCCAGTATGGAGGAATGTCGTGGCTGTTTAAGAAGTACCCACAAAACAAGAAAAAGAGGGCAGTGAAAGCAATCACAGCTGCATAACCCAAGATATAGTTTGGTACTACTGAGCTAATGAATACAACGAATGAGTTTGTTGAAAGCAGGGACATGTAGAGGACTATCAGAAAATATATGAAAGATCCCCGAAGTTTCAAAGCGAACCAAACTATCAAAGCATAAACCAGAGCTTGCAGGCCAAGAAAAGGCAGGTGAGTAATCAAACCAGCTATGGTGTAAGATGATGCTCTGTAGGCATTGTGGGAAGTTTCACGGATGAAAATGAAACGTTCTTGTATGAATGCTGGGACAGCATCATTGGAAGAGAAAAAGAAGAGACAGACGGTAAAGATGAAGAAGCTGAGACGGTCTGTAATTCCTTGGGTATTCTCTTTAGGTTTCAAGAACATTGTAGCCATCATAAATCCCATCACTGTCAGGACCATCAACCTTGAGAGGAACAGCTCGGGTGTTCGTGAGATGTTCTTGAAGTTTCTACGCATAAGAATCCAGGTCTCAGAGAAGAACGAGTTCGAAATCTTTTTTCCCATGTTATTATGTATGGGAACAGATTTTGAACCGATATTTGAAGTCAGGTAGTCATTTTCATTCACTGTGTAATCACTGCTATGAGGTGTTGGTGTGCCATTAAGAACATCAAATGAGTATGCATAAGAGGCCGAAGAATTACTGCAAATCAAGTAAAACTGAAGATTATAGTTCTCGGCTTTGATGCTGTATCAAATGGATGTTAATAGTAAAATAGTAATGAAATACAACTTTTAAGCATTGATTTGATGTACCTCATTTGATTACGATTTTTTGTTCCATCTTGTTGTCTATGTTGCAGCCTCGATGCCTGCATAACCACACTATTACTCGCACTCCATGATCTTGATGTGTTATAAGGGCTTCTCAAACTATGGTTAAAATCATTTAAAGCGCGAGTATTAGTTTGCAAATGGAGTCGTTTTCCAGTTACAAAGTTGCCAGAGTGAGAGGATGAAACCGGCGAGGATTGTATAGTAGATAGTGAAATCTCTTCATCAGTCAAGTGGGGTGGATTCGTTCCTGTCCTAGCAAACTCAGCTAGTGCCTCCACTCCAAATTCAGACTGATCATATGCTCGAATAACATCCATTAGATATTCAATTGGACTTTCCCCTTGAGGCACTTTTCGTCCCATTACAGTGAGATGGTGATTAACATCCTTTGATGGCCCTTGAAACATAAGCTGTCCTCGAGCAAGGATGATGAGATGGTCTAAGAATGATAGGATTCGTGATGATGGCTGGTGAATTGTAAGGACCACAGTGCTGCCAGTGCTCGCTATGTTATGAACCTTTTCAATGACACTATACGCACTGGTTGAGTCTAGTCCTGAAGTAGGCTCATCAAGGAAGAGCACTGATGGCCCATGGATGATGTCCACCCCAATCGATACTCTTCTACGTTCGCCGCCAGACACCCCTCTTGTTCCTTCATCTCCAATATAGGTGTTTCGAGCTGACTGCGATAGAACAACCAACCAATGATTTCATTGGTTAGATCTTGAAATATAACAAATACATTGAAAGGAAAAAAGCTAATGATCTGCTTACAGATAAGCCAAGTTGCTCAATCATGTTTTCCACTCGTTGCTTTTTTTCGTTCTTTGGAATTGGACCAAGCCGAAAGTCTGCTGCAAACATCAGAGTCTCATATACAGTGAGCTTTGGGAAGAGCCTGTCATCTTGCATGATATATGCAGAAGTTCTTTTAATCAAGCCTGGGCTCATTTCCATGCCATCCAAAGAAACTCTGCCCTTCAGGCTTCCACTTGCAATTCTTCCTGCTAGACCATCCAGAAAGGTAGATTTTCCAGCCCCACTGGGACCTAATACTGCAGTGATACTTCCTTTTGGTGCATACCCCGAAATCCTGTGCAACAAATCTACTTCTTGCTTCACCAGTTTCCCTTCATGTTCCTTGTCTTTTAACACAGTATAAGTAAGGTCAAAGAACTCAAGCCCACCATTAAACTTTGTCCGGTAACCACCACCATTGGCCATCTCTCCTGGTTAGTGTAGCAAGCTTTATAGAGAGAAAATTTAGAACACCATGCAGAAAGGGAGTTGAGAGACTTCCGGTTCGTTTTTTTTCCCCTTCTTTTGGGGGTCTCCCAATTTTTTGGCTTTAGGAAGCCGAAGAGGAGTTAAATGGAAACAATCAGCGTAGAAGTGGAGCAAAATCCTAAGCTATCCAATTCCATTCTTTGAAGAATCCGTACTAGATCGTATGGATCACAAAGAACTAGAAAACTTTCTTGTTTTCTTCGTCCAATTTTGGCTTATGCCTAGCGTTTGTGTTTTTAGCATACCAGCCCCCTGCTGTTTTTCATTCGAGTCCTTGTTAGGATTAACATCCCGACGACAGTTGGATTTGGAGTTTTGCCATTTCAACGTTTTGCTTCTGTCATCAGTGTCGTAAGAACCTGGATATTTATATGATCCCCAGTCTCATCCATTGTTGGATTGCGCATTTTTATATTTTCGAGCAGAGTTTTGTTGGAGATAGGAATCATAATCATCGATGATTGCCTTCTTGACTTGTGTTTAGATGTTGATTTGTATTGGATCTAAATTATTCTCCACGCTGTAATAAGGCCAACATGGCAACACCAAGATGATATATTACAAATGTTACCATTATTTACTTCCTATTTTTGATAAGTTATCATAATTTTCTTGATTTGACAAAAACAATAGTTCAGAAGTAAATCAAAATAAAGAATATAAACTTTCGTATGATTCTTGAAAACCTCCAACATTATTATATAAAATTGTCACATCTAATCCTACATACACTAAATTTATGCCTTACATAATGATAAATTTTGAAACAAAACAGAGTAAGGTTAGCTAGATGGCAAACAGACACCATGGATCACAGCACCAGCAGCATTGGTCAACAAGACAGCAGCAGCACAGAGCAGCAAGACTGAGAAATAAGATAGAGAGAAAATGTTAGGTTGTTATAAACATTAGGTTGGGGTTTAGATGATTGAAATTACCAAGCCTCCAGGCATCCGGGTCCCTGGGGAGGAGCGGCTGCATATTGTGGTGGCGCCACCACTGGAGGCGGCGGCGGCCCCTGATAGTAACCTTCACCGTAGTAAGGATAAGCATACTTGCCTTGGCTCATCTTTCACTTCATGCAGATCAAAACCCAGAGCAGATTTTATGTGATATTAGCATTTGGATTTGTGTTCGTTTGAATTAGAAAGAGA

mRNA sequence

ATGGCTAGAGCTGGCGGAATTACTAACGCTGTAAACGTAGGGATAGCGGTTCAAGCTGATTGGGAAAATCGCGAATTCATCTCTCATATTTCCATCAATGTCCGTCGTCTCTTTGATTTCCTCGTCCATTTCGAGGCAACAACAAAGAGCAAGTTGGCATCTTTGAACGAGAAACTTGATACCCTGGAGAGGCGGCTTGAAATGCTTGAAGTCCAAAGTAAGGTTAGCTAG

Coding sequence (CDS)

ATGGCTAGAGCTGGCGGAATTACTAACGCTGTAAACGTAGGGATAGCGGTTCAAGCTGATTGGGAAAATCGCGAATTCATCTCTCATATTTCCATCAATGTCCGTCGTCTCTTTGATTTCCTCGTCCATTTCGAGGCAACAACAAAGAGCAAGTTGGCATCTTTGAACGAGAAACTTGATACCCTGGAGAGGCGGCTTGAAATGCTTGAAGTCCAAAGTAAGGTTAGCTAG
Homology
[Close]
BLAST of CSPI06G29540 vs. Swiss-Prot
Match: BRK1_ARATH (Protein BRICK 1 OS=Arabidopsis thaliana GN=BRK1 PE=1 SV=1)

HSP 1 Score: 147.9 bits (372), Expect = 5.1e-35
Identity = 76/85 (89.41%), Postives = 81/85 (95.29%), Query Frame = 1 

Query: 1  MARAGGITNAVNVGIAVQADWENREFISHISINVRRLFDFLVHFEATTKSKLASLNEKLD 60
          MA+AGGITNAVNVGIAVQADWENREFISHIS+NVRRLF+FLV FE+TTKSKLASLNEKLD
Sbjct: 1  MAKAGGITNAVNVGIAVQADWENREFISHISLNVRRLFEFLVQFESTTKSKLASLNEKLD 60

Query: 61 TLERRLEMLEVQVSTASANSSLFTT 86
           LERRLEMLEVQVSTA+AN SLF T
Sbjct: 61 LLERRLEMLEVQVSTATANPSLFAT 85

[Close]
BLAST of CSPI06G29540 vs. Swiss-Prot
Match: BRK1_MAIZE (Protein BRICK1 OS=Zea mays GN=BRK1 PE=2 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 2.4e-29
Identity = 65/83 (78.31%), Postives = 74/83 (89.16%), Query Frame = 1 

Query: 1  MARAGGITNAVNVGIAVQADWENREFISHISINVRRLFDFLVHFEATTKSKLASLNEKLD 60
          M R GG+ N VNVGIAVQADWENREFIS+IS+NVRRLFDFL+ FEATTKSKLASLNEKLD
Sbjct: 1  MGRGGGMGNPVNVGIAVQADWENREFISNISLNVRRLFDFLLRFEATTKSKLASLNEKLD 60

Query: 61 TLERRLEMLEVQVSTASANSSLF 84
           LER+LE+LEVQV +A+ N S+F
Sbjct: 61 ILERKLEVLEVQVGSATTNPSVF 83

[Close]
BLAST of CSPI06G29540 vs. Swiss-Prot
Match: BRK1_ORYSJ (Probable protein BRICK1 OS=Oryza sativa subsp. japonica GN=Os02g0829900 PE=3 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 3.2e-29
Identity = 68/85 (80.00%), Postives = 77/85 (90.59%), Query Frame = 1 

Query: 1  MARAGG--ITNAVNVGIAVQADWENREFISHISINVRRLFDFLVHFEATTKSKLASLNEK 60
          MARAGG  + N VNVGIAVQADWENREFIS+IS+NVRRLFDFL+ FEATTKSKLASLNEK
Sbjct: 1  MARAGGHGMGNPVNVGIAVQADWENREFISNISLNVRRLFDFLLRFEATTKSKLASLNEK 60

Query: 61 LDTLERRLEMLEVQVSTASANSSLF 84
          LD LER+LE+LEVQVS+A+ N S+F
Sbjct: 61 LDILERKLEVLEVQVSSATTNPSVF 85

[Close]
BLAST of CSPI06G29540 vs. Swiss-Prot
Match: BRK1_DICDI (Protein BRICK1 OS=Dictyostelium discoideum GN=brk1 PE=1 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 1.3e-09
Identity = 28/59 (47.46%), Postives = 43/59 (72.88%), Query Frame = 1 

Query: 17 VQADWENREFISHISINVRRLFDFLVHFEATTKSKLASLNEKLDTLERRLEMLEVQVST 76
          +Q DWE REFI  +SIN++++ +FL  FE +T++KL+ LNEKL  L+R+++ LE    T
Sbjct: 7  IQKDWEQREFIEDMSINIQKIVEFLNKFELSTRNKLSDLNEKLTILDRQVDYLEATFKT 65

[Close]
BLAST of CSPI06G29540 vs. Swiss-Prot
Match: BRK1B_XENLA (Probable protein BRICK1-B OS=Xenopus laevis GN=brk1-b PE=3 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 3.7e-09
Identity = 27/58 (46.55%), Postives = 44/58 (75.86%), Query Frame = 1 

Query: 17 VQADWENREFISHISINVRRLFDFLVHFEATTKSKLASLNEKLDTLERRLEMLEVQVS 75
          +  DW NRE+I  I+ +++++ DFL  F+ + +S+LA+LNEKL TLERR+E +E +V+
Sbjct: 12 IHQDWANREYIEVITSSIKKIADFLNSFDMSCRSRLATLNEKLTTLERRIEYIEARVT 69

[Close]
BLAST of CSPI06G29540 vs. TrEMBL
Match: A0A0A0KG45_CUCSA (Protein BRICK1 OS=Cucumis sativus GN=Csa_6G497300 PE=4 SV=1)

HSP 1 Score: 162.9 bits (411), Expect = 1.7e-37
Identity = 85/85 (100.00%), Postives = 85/85 (100.00%), Query Frame = 1 

Query: 1  MARAGGITNAVNVGIAVQADWENREFISHISINVRRLFDFLVHFEATTKSKLASLNEKLD 60
          MARAGGITNAVNVGIAVQADWENREFISHISINVRRLFDFLVHFEATTKSKLASLNEKLD
Sbjct: 1  MARAGGITNAVNVGIAVQADWENREFISHISINVRRLFDFLVHFEATTKSKLASLNEKLD 60

Query: 61 TLERRLEMLEVQVSTASANSSLFTT 86
          TLERRLEMLEVQVSTASANSSLFTT
Sbjct: 61 TLERRLEMLEVQVSTASANSSLFTT 85

[Close]
BLAST of CSPI06G29540 vs. TrEMBL
Match: B9SMK3_RICCO (Protein BRICK1, putative OS=Ricinus communis GN=RCOM_0230700 PE=4 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 6.7e-34
Identity = 77/85 (90.59%), Postives = 82/85 (96.47%), Query Frame = 1 

Query: 1  MARAGGITNAVNVGIAVQADWENREFISHISINVRRLFDFLVHFEATTKSKLASLNEKLD 60
          MARAGGITNAVNVGIAVQADWENREFISHIS+NVRRLFDFL+ FEATTKSKLASLNEKLD
Sbjct: 1  MARAGGITNAVNVGIAVQADWENREFISHISLNVRRLFDFLLQFEATTKSKLASLNEKLD 60

Query: 61 TLERRLEMLEVQVSTASANSSLFTT 86
          TLERRLE+LEVQV TA+AN +LFTT
Sbjct: 61 TLERRLELLEVQVGTATANPNLFTT 85

[Close]
BLAST of CSPI06G29540 vs. TrEMBL
Match: W9S1C0_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_016117 PE=4 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 6.7e-34
Identity = 78/85 (91.76%), Postives = 81/85 (95.29%), Query Frame = 1 

Query: 1  MARAGGITNAVNVGIAVQADWENREFISHISINVRRLFDFLVHFEATTKSKLASLNEKLD 60
          MARAGGITNAVNVGIAVQADWENREFISHIS+NVRRLFDFLV FEATTKSKLASLNEKLD
Sbjct: 1  MARAGGITNAVNVGIAVQADWENREFISHISLNVRRLFDFLVQFEATTKSKLASLNEKLD 60

Query: 61 TLERRLEMLEVQVSTASANSSLFTT 86
          TLERRLE+LEVQV TASAN SLF +
Sbjct: 61 TLERRLELLEVQVGTASANPSLFNS 85

[Close]
BLAST of CSPI06G29540 vs. TrEMBL
Match: A0A0D2TJZ7_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G230500 PE=4 SV=1)

HSP 1 Score: 150.2 bits (378), Expect = 1.1e-33
Identity = 77/85 (90.59%), Postives = 82/85 (96.47%), Query Frame = 1 

Query: 1  MARAGGITNAVNVGIAVQADWENREFISHISINVRRLFDFLVHFEATTKSKLASLNEKLD 60
          MARAGGITNAVNVGIAVQADWENREFISHIS+NVRRLF+FL+ FEATTKSKLASLNEKLD
Sbjct: 1  MARAGGITNAVNVGIAVQADWENREFISHISLNVRRLFEFLLQFEATTKSKLASLNEKLD 60

Query: 61 TLERRLEMLEVQVSTASANSSLFTT 86
          TLERRLE+LEVQV TASAN SLF+T
Sbjct: 61 TLERRLELLEVQVGTASANPSLFST 85

[Close]
BLAST of CSPI06G29540 vs. TrEMBL
Match: A0A151TH51_CAJCA (Protein BRICK 1 OS=Cajanus cajan GN=KK1_012668 PE=4 SV=1)

HSP 1 Score: 149.8 bits (377), Expect = 1.5e-33
Identity = 78/85 (91.76%), Postives = 79/85 (92.94%), Query Frame = 1 

Query: 1  MARAGGITNAVNVGIAVQADWENREFISHISINVRRLFDFLVHFEATTKSKLASLNEKLD 60
          MARAGGITNAVNVGIAVQADWENREFISHIS+NVRRLFDFLV FEATTKSKLASLNEKLD
Sbjct: 1  MARAGGITNAVNVGIAVQADWENREFISHISLNVRRLFDFLVQFEATTKSKLASLNEKLD 60

Query: 61 TLERRLEMLEVQVSTASANSSLFTT 86
           LERRLEMLEVQV  ASAN SLF T
Sbjct: 61 VLERRLEMLEVQVGNASANPSLFAT 85

[Close]
BLAST of CSPI06G29540 vs. TAIR10
Match: AT2G22640.1 (AT2G22640.1 BRICK1, putative)

HSP 1 Score: 147.9 bits (372), Expect = 2.9e-36
Identity = 76/85 (89.41%), Postives = 81/85 (95.29%), Query Frame = 1 

Query: 1  MARAGGITNAVNVGIAVQADWENREFISHISINVRRLFDFLVHFEATTKSKLASLNEKLD 60
          MA+AGGITNAVNVGIAVQADWENREFISHIS+NVRRLF+FLV FE+TTKSKLASLNEKLD
Sbjct: 1  MAKAGGITNAVNVGIAVQADWENREFISHISLNVRRLFEFLVQFESTTKSKLASLNEKLD 60

Query: 61 TLERRLEMLEVQVSTASANSSLFTT 86
           LERRLEMLEVQVSTA+AN SLF T
Sbjct: 61 LLERRLEMLEVQVSTATANPSLFAT 85

[Close]
BLAST of CSPI06G29540 vs. NCBI nr
Match: gi|449451369|ref|XP_004143434.1| (PREDICTED: protein BRICK 1 [Cucumis sativus])

HSP 1 Score: 162.9 bits (411), Expect = 2.4e-37
Identity = 85/85 (100.00%), Postives = 85/85 (100.00%), Query Frame = 1 

Query: 1  MARAGGITNAVNVGIAVQADWENREFISHISINVRRLFDFLVHFEATTKSKLASLNEKLD 60
          MARAGGITNAVNVGIAVQADWENREFISHISINVRRLFDFLVHFEATTKSKLASLNEKLD
Sbjct: 1  MARAGGITNAVNVGIAVQADWENREFISHISINVRRLFDFLVHFEATTKSKLASLNEKLD 60

Query: 61 TLERRLEMLEVQVSTASANSSLFTT 86
          TLERRLEMLEVQVSTASANSSLFTT
Sbjct: 61 TLERRLEMLEVQVSTASANSSLFTT 85

[Close]
BLAST of CSPI06G29540 vs. NCBI nr
Match: gi|1009145772|ref|XP_015890519.1| (PREDICTED: protein BRICK 1 [Ziziphus jujuba])

HSP 1 Score: 151.4 bits (381), Expect = 7.3e-34
Identity = 78/85 (91.76%), Postives = 82/85 (96.47%), Query Frame = 1 

Query: 1  MARAGGITNAVNVGIAVQADWENREFISHISINVRRLFDFLVHFEATTKSKLASLNEKLD 60
          MARAGGITNAVNVGIAVQADWENREFISHIS+NVRRLF+FLV FEATTKSKLASLNEKLD
Sbjct: 1  MARAGGITNAVNVGIAVQADWENREFISHISLNVRRLFEFLVQFEATTKSKLASLNEKLD 60

Query: 61 TLERRLEMLEVQVSTASANSSLFTT 86
          TLERRLE+LEVQV TASAN SLFT+
Sbjct: 61 TLERRLELLEVQVGTASANPSLFTS 85

[Close]
BLAST of CSPI06G29540 vs. NCBI nr
Match: gi|703132443|ref|XP_010105126.1| (hypothetical protein L484_016117 [Morus notabilis])

HSP 1 Score: 151.0 bits (380), Expect = 9.6e-34
Identity = 78/85 (91.76%), Postives = 81/85 (95.29%), Query Frame = 1 

Query: 1  MARAGGITNAVNVGIAVQADWENREFISHISINVRRLFDFLVHFEATTKSKLASLNEKLD 60
          MARAGGITNAVNVGIAVQADWENREFISHIS+NVRRLFDFLV FEATTKSKLASLNEKLD
Sbjct: 1  MARAGGITNAVNVGIAVQADWENREFISHISLNVRRLFDFLVQFEATTKSKLASLNEKLD 60

Query: 61 TLERRLEMLEVQVSTASANSSLFTT 86
          TLERRLE+LEVQV TASAN SLF +
Sbjct: 61 TLERRLELLEVQVGTASANPSLFNS 85

[Close]
BLAST of CSPI06G29540 vs. NCBI nr
Match: gi|255572577|ref|XP_002527222.1| (PREDICTED: protein BRICK 1 isoform X1 [Ricinus communis])

HSP 1 Score: 151.0 bits (380), Expect = 9.6e-34
Identity = 77/85 (90.59%), Postives = 82/85 (96.47%), Query Frame = 1 

Query: 1  MARAGGITNAVNVGIAVQADWENREFISHISINVRRLFDFLVHFEATTKSKLASLNEKLD 60
          MARAGGITNAVNVGIAVQADWENREFISHIS+NVRRLFDFL+ FEATTKSKLASLNEKLD
Sbjct: 1  MARAGGITNAVNVGIAVQADWENREFISHISLNVRRLFDFLLQFEATTKSKLASLNEKLD 60

Query: 61 TLERRLEMLEVQVSTASANSSLFTT 86
          TLERRLE+LEVQV TA+AN +LFTT
Sbjct: 61 TLERRLELLEVQVGTATANPNLFTT 85

[Close]
BLAST of CSPI06G29540 vs. NCBI nr
Match: gi|719995830|ref|XP_010254626.1| (PREDICTED: protein BRICK 1 [Nelumbo nucifera])

HSP 1 Score: 150.6 bits (379), Expect = 1.3e-33
Identity = 78/84 (92.86%), Postives = 81/84 (96.43%), Query Frame = 1 

Query: 1  MARAGGITNAVNVGIAVQADWENREFISHISINVRRLFDFLVHFEATTKSKLASLNEKLD 60
          MARAGGITNAVNVGIAVQADWENREFISHIS+NVRRLF+FLV FEATTKSKLASLNEKLD
Sbjct: 1  MARAGGITNAVNVGIAVQADWENREFISHISLNVRRLFEFLVQFEATTKSKLASLNEKLD 60

Query: 61 TLERRLEMLEVQVSTASANSSLFT 85
           LERRLE+LEVQVSTASAN SLFT
Sbjct: 61 MLERRLELLEVQVSTASANPSLFT 84

The following BLAST results are available for this feature:
BLAST of CSPI06G29540 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BRK1_ARATH5.1e-3589.41Protein BRICK 1 OS=Arabidopsis thaliana GN=BRK1 PE=1 SV=1[more]
BRK1_MAIZE2.4e-2978.31Protein BRICK1 OS=Zea mays GN=BRK1 PE=2 SV=1[more]
BRK1_ORYSJ3.2e-2980.00Probable protein BRICK1 OS=Oryza sativa subsp. japonica GN=Os02g0829900 PE=3 SV=... [more]
BRK1_DICDI1.3e-0947.46Protein BRICK1 OS=Dictyostelium discoideum GN=brk1 PE=1 SV=1[more]
BRK1B_XENLA3.7e-0946.55Probable protein BRICK1-B OS=Xenopus laevis GN=brk1-b PE=3 SV=1[more]
BLAST of CSPI06G29540 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KG45_CUCSA1.7e-37100.00Protein BRICK1 OS=Cucumis sativus GN=Csa_6G497300 PE=4 SV=1[more]
B9SMK3_RICCO6.7e-3490.59Protein BRICK1, putative OS=Ricinus communis GN=RCOM_0230700 PE=4 SV=1[more]
W9S1C0_9ROSA6.7e-3491.76Uncharacterized protein OS=Morus notabilis GN=L484_016117 PE=4 SV=1[more]
A0A0D2TJZ7_GOSRA1.1e-3390.59Uncharacterized protein OS=Gossypium raimondii GN=B456_007G230500 PE=4 SV=1[more]
A0A151TH51_CAJCA1.5e-3391.76Protein BRICK 1 OS=Cajanus cajan GN=KK1_012668 PE=4 SV=1[more]
BLAST of CSPI06G29540 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G22640.12.9e-3689.41 BRICK1, putative[more]
BLAST of CSPI06G29540 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449451369|ref|XP_004143434.1|2.4e-37100.00PREDICTED: protein BRICK 1 [Cucumis sativus][more]
gi|1009145772|ref|XP_015890519.1|7.3e-3491.76PREDICTED: protein BRICK 1 [Ziziphus jujuba][more]
gi|703132443|ref|XP_010105126.1|9.6e-3491.76hypothetical protein L484_016117 [Morus notabilis][more]
gi|255572577|ref|XP_002527222.1|9.6e-3490.59PREDICTED: protein BRICK 1 isoform X1 [Ricinus communis][more]
gi|719995830|ref|XP_010254626.1|1.3e-3392.86PREDICTED: protein BRICK 1 [Nelumbo nucifera][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR019466Matrilin, coiled-coil trimerisation domain
IPR019466Matrilin, coiled-coil trimerisation domain
Vocabulary: Biological Process
TermDefinition
GO:0007015actin filament organization
GO:0007015actin filament organization
Vocabulary: Cellular Component
TermDefinition
GO:0031209SCAR complex
GO:0031209SCAR complex
Vocabulary: Molecular Function
TermDefinition
GO:0032403protein complex binding
GO:0032403protein complex binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0045010 actin nucleation
biological_process GO:0051259 protein oligomerization
biological_process GO:0010090 trichome morphogenesis
biological_process GO:0007015 actin filament organization
biological_process GO:0030041 actin filament polymerization
cellular_component GO:0005886 plasma membrane
cellular_component GO:0031209 SCAR complex
molecular_function GO:0042802 identical protein binding
molecular_function GO:0032403 protein complex binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI06G29540.2CSPI06G29540.2mRNA
CSPI06G29540.1CSPI06G29540.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019466Matrilin, coiled-coil trimerisation domainGENE3DG3DSA:1.20.5.30coord: 41..71
score: 7.
NoneNo IPR availableunknownCoilCoilcoord: 45..72
scor

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CSPI06G29540CsaV3_6G044750Cucumber (Chinese Long) v3cpicucB363
CSPI06G29540Bhi03G001335Wax gourdcpiwgoB631
CSPI06G29540Cucsa.103790Cucumber (Gy14) v1cgycpiB122
CSPI06G29540Cp4.1LG19g10220Cucurbita pepo (Zucchini)cpecpiB503
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CSPI06G29540Wild cucumber (PI 183967)cpicpiB085
CSPI06G29540Wild cucumber (PI 183967)cpicpiB136
CSPI06G29540Watermelon (97103) v1cpiwmB519
CSPI06G29540Cucumber (Gy14) v1cgycpiB248
CSPI06G29540Cucumber (Gy14) v1cgycpiB476
CSPI06G29540Cucurbita maxima (Rimu)cmacpiB195
CSPI06G29540Cucurbita maxima (Rimu)cmacpiB689
CSPI06G29540Cucurbita maxima (Rimu)cmacpiB893
CSPI06G29540Cucurbita moschata (Rifu)cmocpiB180
CSPI06G29540Cucurbita moschata (Rifu)cmocpiB681
CSPI06G29540Cucurbita moschata (Rifu)cmocpiB873
CSPI06G29540Cucumber (Chinese Long) v2cpicuB278
CSPI06G29540Cucumber (Chinese Long) v2cpicuB297
CSPI06G29540Cucumber (Chinese Long) v2cpicuB313
CSPI06G29540Melon (DHL92) v3.5.1cpimeB471
CSPI06G29540Melon (DHL92) v3.5.1cpimeB483
CSPI06G29540Melon (DHL92) v3.5.1cpimeB508
CSPI06G29540Watermelon (Charleston Gray)cpiwcgB451
CSPI06G29540Watermelon (Charleston Gray)cpiwcgB453
CSPI06G29540Watermelon (Charleston Gray)cpiwcgB538
CSPI06G29540Watermelon (97103) v1cpiwmB487
CSPI06G29540Watermelon (97103) v1cpiwmB554
CSPI06G29540Cucurbita pepo (Zucchini)cpecpiB080
CSPI06G29540Cucurbita pepo (Zucchini)cpecpiB841
CSPI06G29540Bottle gourd (USVL1VR-Ls)cpilsiB439
CSPI06G29540Bottle gourd (USVL1VR-Ls)cpilsiB462
CSPI06G29540Bottle gourd (USVL1VR-Ls)cpilsiB492
CSPI06G29540Melon (DHL92) v3.6.1cpimedB462
CSPI06G29540Melon (DHL92) v3.6.1cpimedB471
CSPI06G29540Melon (DHL92) v3.6.1cpimedB493
CSPI06G29540Cucumber (Gy14) v2cgybcpiB082
CSPI06G29540Cucumber (Gy14) v2cgybcpiB287
CSPI06G29540Silver-seed gourdcarcpiB0003
CSPI06G29540Silver-seed gourdcarcpiB0446
CSPI06G29540Cucumber (Chinese Long) v3cpicucB328
CSPI06G29540Watermelon (97103) v2cpiwmbB433
CSPI06G29540Watermelon (97103) v2cpiwmbB448
CSPI06G29540Watermelon (97103) v2cpiwmbB528
CSPI06G29540Wax gourdcpiwgoB638
CSPI06G29540Wax gourdcpiwgoB654