CSPI06G25750 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI06G25750
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionUnknown protein
LocationChr6 : 22862536 .. 22863137 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAGATCAAAAGAGAACGAGGAGTTGACGATGTTAAGATCAATCAAAAGCGTAAAATGGGGGAAGTGGATGAAAAAACAGAGTCCCAAATCTCAGAAAAAGCCCTAACTATAATTCCATGGTGAGAAGGAGAATTCAATTGCAAGAAACACCGAAGAAGCCCTCTCAAATCTTCCTTCGAGTATATCTCGTTCTCCAGAATCATTTGAACCATCGAGTGTCGGAAATCCAGGTACGGATCGTCCGAATCCTTCTCCACAGCAACACTCTCCCCCCCGCTCCGACCGAAGCCTCGGAACGTGATCGAGGTTCTGGTCTCGGAGTCGGAGTCGGAGAAGGGAGGGGATTCGGAGTCGGAGGAAGCGGAGGAGAAGCGATGATGATGATGGTTGGGGGATTTGGGGGAGGGCTTTGGTTTGAGGTGGTGGAAGAAGTGAGAGAGGAGCTTAGGCCTGCAAATGTTGAGATCGACGGAGAGGGAAGTGAGTTGGAGATTTCGCCGGGGAGCCGCCATTGTTGTTGAAGTTGGAGAGAGGGTGTGTTGTGTGGCTTTGGGTTTGAAGAGAGAGAGTTGGAATTTGGGGAATGAGTTTTAGAAAACCGT

mRNA sequence

ATGGTGAGAAGGAGAATTCAATTGCAAGAAACACCGAAGAAGCCCTCTCAAATCTTCCTTCGAGTATATCTCGTTCTCCAGAATCATTTGAACCATCGAGTGTCGGAAATCCAGGTACGGATCGTCCGAATCCTTCTCCACAGCAACACTCTCCCCCCCGCTCCGACCGAAGCCTCGGAACGTGATCGAGGTTCTGGTCTCGGAGTCGGAGTCGGAGAAGGGAGGGGATTCGGAGTCGGAGGAAGCGGAGGAGAAGCGATGATGATGATGGTTGGGGGATTTGGGGGAGGGCTTTGGTTTGAGGTGGTGGAAGAAGTGAGAGAGGAGCTTAGGCCTGCAAATGTTGAGATCGACGGAGAGGGAAGTGAGTTGGAGATTTCGCCGGGGAGCCGCCATTGTTGTTGA

Coding sequence (CDS)

ATGGTGAGAAGGAGAATTCAATTGCAAGAAACACCGAAGAAGCCCTCTCAAATCTTCCTTCGAGTATATCTCGTTCTCCAGAATCATTTGAACCATCGAGTGTCGGAAATCCAGGTACGGATCGTCCGAATCCTTCTCCACAGCAACACTCTCCCCCCCGCTCCGACCGAAGCCTCGGAACGTGATCGAGGTTCTGGTCTCGGAGTCGGAGTCGGAGAAGGGAGGGGATTCGGAGTCGGAGGAAGCGGAGGAGAAGCGATGATGATGATGGTTGGGGGATTTGGGGGAGGGCTTTGGTTTGAGGTGGTGGAAGAAGTGAGAGAGGAGCTTAGGCCTGCAAATGTTGAGATCGACGGAGAGGGAAGTGAGTTGGAGATTTCGCCGGGGAGCCGCCATTGTTGTTGA
Homology
[Close]
BLAST of CSPI06G25750 vs. TrEMBL
Match: A0A0A0KIS5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G454390 PE=4 SV=1)

HSP 1 Score: 256.1 bits (653), Expect = 2.3e-65
Identity = 132/134 (98.51%), Postives = 133/134 (99.25%), Query Frame = 1 

Query: 1   MVRRRIQLQETPKKPSQIFLRVYLVLQNHLNHRVSEIQVRIVRILLHSNTLPPAPTEASE 60
           MVRRRIQLQETPKKPSQIFLRVYLVLQNHLNHRVSEIQVRIVRILL+SNTLPPAPTEASE
Sbjct: 1   MVRRRIQLQETPKKPSQIFLRVYLVLQNHLNHRVSEIQVRIVRILLNSNTLPPAPTEASE 60

Query: 61  RDRGSGLGVGVGEGRGFGVGGSGGEAMMMMVGGFGGGLWFEVVEEVREELRPANVEIDGE 120
           RDRGSGLGVGVGEGRGFGVGGSGGEAMMMMVGGFGGGLWFEVVEEVREELR ANVEIDGE
Sbjct: 61  RDRGSGLGVGVGEGRGFGVGGSGGEAMMMMVGGFGGGLWFEVVEEVREELRSANVEIDGE 120

Query: 121 GSELEISPGSRHCC 135
           GSELEISPGSRHCC
Sbjct: 121 GSELEISPGSRHCC 134

[Close]
BLAST of CSPI06G25750 vs. NCBI nr
Match: gi|700193088|gb|KGN48292.1| (hypothetical protein Csa_6G454390 [Cucumis sativus])

HSP 1 Score: 256.1 bits (653), Expect = 3.3e-65
Identity = 132/134 (98.51%), Postives = 133/134 (99.25%), Query Frame = 1 

Query: 1   MVRRRIQLQETPKKPSQIFLRVYLVLQNHLNHRVSEIQVRIVRILLHSNTLPPAPTEASE 60
           MVRRRIQLQETPKKPSQIFLRVYLVLQNHLNHRVSEIQVRIVRILL+SNTLPPAPTEASE
Sbjct: 1   MVRRRIQLQETPKKPSQIFLRVYLVLQNHLNHRVSEIQVRIVRILLNSNTLPPAPTEASE 60

Query: 61  RDRGSGLGVGVGEGRGFGVGGSGGEAMMMMVGGFGGGLWFEVVEEVREELRPANVEIDGE 120
           RDRGSGLGVGVGEGRGFGVGGSGGEAMMMMVGGFGGGLWFEVVEEVREELR ANVEIDGE
Sbjct: 61  RDRGSGLGVGVGEGRGFGVGGSGGEAMMMMVGGFGGGLWFEVVEEVREELRSANVEIDGE 120

Query: 121 GSELEISPGSRHCC 135
           GSELEISPGSRHCC
Sbjct: 121 GSELEISPGSRHCC 134

The following BLAST results are available for this feature:
BLAST of CSPI06G25750 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CSPI06G25750 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KIS5_CUCSA2.3e-6598.51Uncharacterized protein OS=Cucumis sativus GN=Csa_6G454390 PE=4 SV=1[more]
BLAST of CSPI06G25750 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CSPI06G25750 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700193088|gb|KGN48292.1|3.3e-6598.51hypothetical protein Csa_6G454390 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI06G25750.1CSPI06G25750.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CSPI06G25750Csa6G454390Cucumber (Chinese Long) v2cpicuB313
CSPI06G25750Bhi03G001392Wax gourdcpiwgoB637
CSPI06G25750Cucsa.083680Cucumber (Gy14) v1cgycpiB085
CSPI06G25750Cp4.1LG19g05040Cucurbita pepo (Zucchini)cpecpiB503
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CSPI06G25750Cucumber (Chinese Long) v3cpicucB334
CSPI06G25750Cucumber (Chinese Long) v3cpicucB363
CSPI06G25750Watermelon (97103) v2cpiwmbB438
CSPI06G25750Watermelon (97103) v2cpiwmbB442
CSPI06G25750Watermelon (97103) v2cpiwmbB458
CSPI06G25750Watermelon (97103) v2cpiwmbB479
CSPI06G25750Wild cucumber (PI 183967)cpicpiB125
CSPI06G25750Cucumber (Gy14) v1cgycpiB362
CSPI06G25750Cucurbita maxima (Rimu)cmacpiB271
CSPI06G25750Cucurbita maxima (Rimu)cmacpiB648
CSPI06G25750Cucurbita maxima (Rimu)cmacpiB689
CSPI06G25750Cucurbita maxima (Rimu)cmacpiB855
CSPI06G25750Cucurbita maxima (Rimu)cmacpiB894
CSPI06G25750Cucurbita moschata (Rifu)cmocpiB261
CSPI06G25750Cucurbita moschata (Rifu)cmocpiB639
CSPI06G25750Cucurbita moschata (Rifu)cmocpiB681
CSPI06G25750Cucurbita moschata (Rifu)cmocpiB838
CSPI06G25750Cucurbita moschata (Rifu)cmocpiB874
CSPI06G25750Cucumber (Chinese Long) v2cpicuB284
CSPI06G25750Melon (DHL92) v3.5.1cpimeB485
CSPI06G25750Melon (DHL92) v3.5.1cpimeB513
CSPI06G25750Watermelon (Charleston Gray)cpiwcgB444
CSPI06G25750Watermelon (Charleston Gray)cpiwcgB463
CSPI06G25750Watermelon (Charleston Gray)cpiwcgB488
CSPI06G25750Watermelon (97103) v1cpiwmB467
CSPI06G25750Watermelon (97103) v1cpiwmB524
CSPI06G25750Watermelon (97103) v1cpiwmB534
CSPI06G25750Cucurbita pepo (Zucchini)cpecpiB081
CSPI06G25750Cucurbita pepo (Zucchini)cpecpiB627
CSPI06G25750Cucurbita pepo (Zucchini)cpecpiB762
CSPI06G25750Cucurbita pepo (Zucchini)cpecpiB878
CSPI06G25750Bottle gourd (USVL1VR-Ls)cpilsiB423
CSPI06G25750Bottle gourd (USVL1VR-Ls)cpilsiB440
CSPI06G25750Bottle gourd (USVL1VR-Ls)cpilsiB452
CSPI06G25750Melon (DHL92) v3.6.1cpimedB473
CSPI06G25750Melon (DHL92) v3.6.1cpimedB497
CSPI06G25750Cucumber (Gy14) v2cgybcpiB140
CSPI06G25750Cucumber (Gy14) v2cgybcpiB287
CSPI06G25750Silver-seed gourdcarcpiB0271
CSPI06G25750Silver-seed gourdcarcpiB0282
CSPI06G25750Silver-seed gourdcarcpiB0644
CSPI06G25750Silver-seed gourdcarcpiB0847
CSPI06G25750Silver-seed gourdcarcpiB0965