CSPI06G24410 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI06G24410
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionUnknown protein
LocationChr6 : 21851940 .. 21852200 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTGAGAAAGTGGAAGAAGGAGAGAAGAGTAAAAGGGGGGGGAGGGAGAAAAACGACAAGTCGGCAATGATCGATAAAAAACGGGAACGCAGCATCGACGTAACAAGCCAACAGATTAGGGGAAGAAACAAATGGAAAAGGAAAGCTGAGGTGGGACCTTCCTACACGTGGCCACTCAATGCCAAAGTGGTGAGGTCAAGTGGGACCACCCAAAGACAAGTAAATGAAGAACCGTTGATTTGGCTGACGGTGAGATGA

mRNA sequence

ATGGGTGAGAAAGTGGAAGAAGGAGAGAAGAGTAAAAGGGGGGGGAGGGAGAAAAACGACAAGTCGGCAATGATCGATAAAAAACGGGAACGCAGCATCGACGTAACAAGCCAACAGATTAGGGGAAGAAACAAATGGAAAAGGAAAGCTGAGGTGGGACCTTCCTACACGTGGCCACTCAATGCCAAAGTGGTGAGGTCAAGTGGGACCACCCAAAGACAAGTAAATGAAGAACCGTTGATTTGGCTGACGGTGAGATGA

Coding sequence (CDS)

ATGGGTGAGAAAGTGGAAGAAGGAGAGAAGAGTAAAAGGGGGGGGAGGGAGAAAAACGACAAGTCGGCAATGATCGATAAAAAACGGGAACGCAGCATCGACGTAACAAGCCAACAGATTAGGGGAAGAAACAAATGGAAAAGGAAAGCTGAGGTGGGACCTTCCTACACGTGGCCACTCAATGCCAAAGTGGTGAGGTCAAGTGGGACCACCCAAAGACAAGTAAATGAAGAACCGTTGATTTGGCTGACGGTGAGATGA
Homology
[Close]
BLAST of CSPI06G24410 vs. TrEMBL
Match: A0A0A0KK67_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G445200 PE=4 SV=1)

HSP 1 Score: 130.2 bits (326), Expect = 1.2e-27
Identity = 63/63 (100.00%), Postives = 63/63 (100.00%), Query Frame = 1 

Query: 24 MIDKKRERSIDVTSQQIRGRNKWKRKAEVGPSYTWPLNAKVVRSSGTTQRQVNEEPLIWL 83
          MIDKKRERSIDVTSQQIRGRNKWKRKAEVGPSYTWPLNAKVVRSSGTTQRQVNEEPLIWL
Sbjct: 1  MIDKKRERSIDVTSQQIRGRNKWKRKAEVGPSYTWPLNAKVVRSSGTTQRQVNEEPLIWL 60

Query: 84 TVR 87
          TVR
Sbjct: 61 TVR 63

[Close]
BLAST of CSPI06G24410 vs. NCBI nr
Match: gi|700192952|gb|KGN48156.1| (hypothetical protein Csa_6G445200 [Cucumis sativus])

HSP 1 Score: 130.2 bits (326), Expect = 1.8e-27
Identity = 63/63 (100.00%), Postives = 63/63 (100.00%), Query Frame = 1 

Query: 24 MIDKKRERSIDVTSQQIRGRNKWKRKAEVGPSYTWPLNAKVVRSSGTTQRQVNEEPLIWL 83
          MIDKKRERSIDVTSQQIRGRNKWKRKAEVGPSYTWPLNAKVVRSSGTTQRQVNEEPLIWL
Sbjct: 1  MIDKKRERSIDVTSQQIRGRNKWKRKAEVGPSYTWPLNAKVVRSSGTTQRQVNEEPLIWL 60

Query: 84 TVR 87
          TVR
Sbjct: 61 TVR 63

The following BLAST results are available for this feature:
BLAST of CSPI06G24410 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CSPI06G24410 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KK67_CUCSA1.2e-27100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_6G445200 PE=4 SV=1[more]
BLAST of CSPI06G24410 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CSPI06G24410 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700192952|gb|KGN48156.1|1.8e-27100.00hypothetical protein Csa_6G445200 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI06G24410.1CSPI06G24410.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CSPI06G24410Csa6G445200Cucumber (Chinese Long) v2cpicuB313
CSPI06G24410ClCG04G009100Watermelon (Charleston Gray)cpiwcgB488
CSPI06G24410CsaV3_6G039620Cucumber (Chinese Long) v3cpicucB363
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CSPI06G24410Melon (DHL92) v3.6.1cpimedB420
CSPI06G24410Melon (DHL92) v3.6.1cpimedB473
CSPI06G24410Melon (DHL92) v3.6.1cpimedB498
CSPI06G24410Cucumber (Gy14) v2cgybcpiB140
CSPI06G24410Cucumber (Gy14) v2cgybcpiB287
CSPI06G24410Cucumber (Gy14) v2cgybcpiB290
CSPI06G24410Silver-seed gourdcarcpiB0187
CSPI06G24410Silver-seed gourdcarcpiB0271
CSPI06G24410Silver-seed gourdcarcpiB0282
CSPI06G24410Silver-seed gourdcarcpiB0455
CSPI06G24410Silver-seed gourdcarcpiB0585
CSPI06G24410Cucumber (Chinese Long) v3cpicucB334
CSPI06G24410Cucumber (Chinese Long) v3cpicucB367
CSPI06G24410Watermelon (97103) v2cpiwmbB442
CSPI06G24410Watermelon (97103) v2cpiwmbB458
CSPI06G24410Watermelon (97103) v2cpiwmbB479
CSPI06G24410Wax gourdcpiwgoB532
CSPI06G24410Wax gourdcpiwgoB635
CSPI06G24410Wild cucumber (PI 183967)cpicpiB124
CSPI06G24410Wild cucumber (PI 183967)cpicpiB186
CSPI06G24410Cucumber (Gy14) v1cgycpiB168
CSPI06G24410Cucumber (Gy14) v1cgycpiB462
CSPI06G24410Cucumber (Gy14) v1cgycpiB571
CSPI06G24410Cucurbita maxima (Rimu)cmacpiB271
CSPI06G24410Cucurbita maxima (Rimu)cmacpiB689
CSPI06G24410Cucurbita maxima (Rimu)cmacpiB857
CSPI06G24410Cucurbita maxima (Rimu)cmacpiB894
CSPI06G24410Cucurbita moschata (Rifu)cmocpiB259
CSPI06G24410Cucurbita moschata (Rifu)cmocpiB681
CSPI06G24410Cucurbita moschata (Rifu)cmocpiB838
CSPI06G24410Cucurbita moschata (Rifu)cmocpiB874
CSPI06G24410Cucumber (Chinese Long) v2cpicuB282
CSPI06G24410Cucumber (Chinese Long) v2cpicuB315
CSPI06G24410Melon (DHL92) v3.5.1cpimeB481
CSPI06G24410Melon (DHL92) v3.5.1cpimeB487
CSPI06G24410Melon (DHL92) v3.5.1cpimeB514
CSPI06G24410Watermelon (Charleston Gray)cpiwcgB444
CSPI06G24410Watermelon (Charleston Gray)cpiwcgB463
CSPI06G24410Watermelon (97103) v1cpiwmB467
CSPI06G24410Watermelon (97103) v1cpiwmB481
CSPI06G24410Watermelon (97103) v1cpiwmB524
CSPI06G24410Watermelon (97103) v1cpiwmB534
CSPI06G24410Cucurbita pepo (Zucchini)cpecpiB081
CSPI06G24410Cucurbita pepo (Zucchini)cpecpiB503
CSPI06G24410Cucurbita pepo (Zucchini)cpecpiB627
CSPI06G24410Cucurbita pepo (Zucchini)cpecpiB880
CSPI06G24410Bottle gourd (USVL1VR-Ls)cpilsiB440
CSPI06G24410Bottle gourd (USVL1VR-Ls)cpilsiB452