CSPI06G21990 (gene) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CAAATATAACTATGTAAATTGAATTTGTTAGTCCACTCTCACATGTTCCTTTACCTTTCCAGGCTAACCTGCCAAAAGAGATTTCAGACTATTTAAATAAGATGGGAGCAAGGATACCGAACATTAAACCAGGGAAAGCTTCTATAGAGTACCTAACGAAAATTCAAGCATCAACACGCTTTTGGGGTATGTTTTATCATTCAACTTCTGATTTGAAGGACAAAGTCTTTCCTAGCTTGCCATTGTTTTCATATATTGGTCGAGGTTGATTTCCTTTTGACTTTGGATTGTAAATTACAGGAGGGCTACTGTTGAGTTTTTTGGCAACGACATCATCTGTTCTTGATCATTACTTACGCAGTGTTAATGCCGGTTTTGCAATTGGTTTTACATCAGTTCTGATTATTGTAAGTGCTAAAATTTATCATTTTCTTATCATTCTTCAGTCATTGAAAAATGCCATGACACTGGTTATCCCTCCACATACACAGTTTTAACCCTGACAATGCAACTAATCGTCGTTGTAAATATTTCCAACAGATTGTTGGGATTTTGATAGAAATACAAATACTGTATCCTCCCATATCAAAATCTGTTAAGAGGAAGATGTGGTAGATTTATCATATTAGTATACTATTCAAAATTTCCAACCTTATTGATGAACTTAAGTTGCTGCATGTTCACTGTTCAGGTTGGTTCCATTATTGAACTCAGAAGATCTTACCAAGCATATAATGTCATGCCAAGTTTAAGCAATGCTTTGAGGCGCTATGGTGTATAACAAGTTCAAATGATGCTCCTAGTGGTTCTGTATTTGTGCCTCAAAAGTATCCAATAATCTCTTTCAAGTATAATTGTCTGATTCCTCCTGGCTCGTAGCTGGACTAGAACAGAGCCTTTCATCCCTTCCTCAATTCTTTTTTAGTGCTGAGGACTGCAGAGTTTCAGAATAGTGGCCATCCATAACAATGTATACCCACACAAGTACCAAGAAAATTTTGATCCTCTGGTCTTTGAAACATCTAGCGAACAAGGGACACAAGCATTGGAATGTTAAAGATGCTAATCACGAGTGTAGCTGCAAGATCTTATTCTTGAGCCTAATTTTGACCATTTTCTCCCTATTTTGTATATATAAATTCTGTAATATGAATCTTAACATATTTATTAGATTATAGGTACATCGGTG ATGGGAGCAAGGATACCGAACATTAAACCAGGGAAAGCTTCTATAGAGTACCTAACGAAAATTCAAGCATCAACACGCTTTTGGGGAGGGCTACTGTTGAGTTTTTTGGCAACGACATCATCTGTTCTTGATCATTACTTACGCAGTGTTAATGCCGGTTTTGCAATTGGTTTTACATCAGTTCTGATTATTGTTGGTTCCATTATTGAACTCAGAAGATCTTACCAAGCATATAATGTCATGCCAAGTTTAAGCAATGCTTTGAGGCGCTATGGTGTATAA ATGGGAGCAAGGATACCGAACATTAAACCAGGGAAAGCTTCTATAGAGTACCTAACGAAAATTCAAGCATCAACACGCTTTTGGGGAGGGCTACTGTTGAGTTTTTTGGCAACGACATCATCTGTTCTTGATCATTACTTACGCAGTGTTAATGCCGGTTTTGCAATTGGTTTTACATCAGTTCTGATTATTGTTGGTTCCATTATTGAACTCAGAAGATCTTACCAAGCATATAATGTCATGCCAAGTTTAAGCAATGCTTTGAGGCGCTATGGTGTATAA
BLAST of CSPI06G21990 vs. Swiss-Prot
Match: SCY2_ARATH (Preprotein translocase subunit SCY2, chloroplastic OS=Arabidopsis thaliana GN=SCY2 PE=2 SV=1) HSP 1 Score: 169.5 bits (428), Expect = 1.8e-41 Identity = 84/93 (90.32%), Postives = 89/93 (95.70%), Query Frame = 1
BLAST of CSPI06G21990 vs. Swiss-Prot
Match: SECY_PYRSA (Protein translocase subunit SecY (Fragment) OS=Pyrenomonas salina GN=secY PE=3 SV=1) HSP 1 Score: 59.3 bits (142), Expect = 2.6e-08 Identity = 30/89 (33.71%), Postives = 52/89 (58.43%), Query Frame = 1
BLAST of CSPI06G21990 vs. TrEMBL
Match: A0A0A0KDV7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G410010 PE=3 SV=1) HSP 1 Score: 182.6 bits (462), Expect = 2.3e-43 Identity = 93/93 (100.00%), Postives = 93/93 (100.00%), Query Frame = 1
BLAST of CSPI06G21990 vs. TrEMBL
Match: A0A0S3RXV3_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.04G298100 PE=3 SV=1) HSP 1 Score: 176.4 bits (446), Expect = 1.6e-41 Identity = 89/93 (95.70%), Postives = 91/93 (97.85%), Query Frame = 1
BLAST of CSPI06G21990 vs. TrEMBL
Match: A0A0L9TI59_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan902s000400 PE=3 SV=1) HSP 1 Score: 176.4 bits (446), Expect = 1.6e-41 Identity = 89/93 (95.70%), Postives = 91/93 (97.85%), Query Frame = 1
BLAST of CSPI06G21990 vs. TrEMBL
Match: V7CYE8_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_001G150500g PE=3 SV=1) HSP 1 Score: 176.0 bits (445), Expect = 2.1e-41 Identity = 88/93 (94.62%), Postives = 91/93 (97.85%), Query Frame = 1
BLAST of CSPI06G21990 vs. TrEMBL
Match: I1JNT8_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_03G153100 PE=3 SV=1) HSP 1 Score: 174.9 bits (442), Expect = 4.7e-41 Identity = 88/93 (94.62%), Postives = 91/93 (97.85%), Query Frame = 1
BLAST of CSPI06G21990 vs. TAIR10
Match: AT2G31530.1 (AT2G31530.1 SecY protein transport family protein) HSP 1 Score: 169.5 bits (428), Expect = 1.0e-42 Identity = 84/93 (90.32%), Postives = 89/93 (95.70%), Query Frame = 1
BLAST of CSPI06G21990 vs. NCBI nr
Match: gi|778716195|ref|XP_004140093.2| (PREDICTED: preprotein translocase subunit SCY2, chloroplastic [Cucumis sativus]) HSP 1 Score: 182.6 bits (462), Expect = 3.3e-43 Identity = 93/93 (100.00%), Postives = 93/93 (100.00%), Query Frame = 1
BLAST of CSPI06G21990 vs. NCBI nr
Match: gi|700192691|gb|KGN47895.1| (hypothetical protein Csa_6G410010 [Cucumis sativus]) HSP 1 Score: 182.6 bits (462), Expect = 3.3e-43 Identity = 93/93 (100.00%), Postives = 93/93 (100.00%), Query Frame = 1
BLAST of CSPI06G21990 vs. NCBI nr
Match: gi|659097114|ref|XP_008449450.1| (PREDICTED: preprotein translocase subunit SCY2, chloroplastic [Cucumis melo]) HSP 1 Score: 181.0 bits (458), Expect = 9.5e-43 Identity = 91/93 (97.85%), Postives = 93/93 (100.00%), Query Frame = 1
BLAST of CSPI06G21990 vs. NCBI nr
Match: gi|950954026|ref|XP_014496320.1| (PREDICTED: preprotein translocase subunit SCY2, chloroplastic [Vigna radiata var. radiata]) HSP 1 Score: 176.4 bits (446), Expect = 2.3e-41 Identity = 89/93 (95.70%), Postives = 91/93 (97.85%), Query Frame = 1
BLAST of CSPI06G21990 vs. NCBI nr
Match: gi|920683381|gb|KOM30107.1| (hypothetical protein LR48_Vigan902s000400 [Vigna angularis]) HSP 1 Score: 176.4 bits (446), Expect = 2.3e-41 Identity = 89/93 (95.70%), Postives = 91/93 (97.85%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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